View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8186_low_47 (Length: 284)
Name: NF8186_low_47
Description: NF8186
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8186_low_47 |
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Alignment Details
Target: chr6 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 23 - 275
Target Start/End: Original strand, 13212416 - 13212667
Alignment:
| Q |
23 |
attttaaacactgcataactaattagtgcttcacctttcaaa-ttgtatttgttatagggttattaattattgtacgtaattttatactctactatgtgt |
121 |
Q |
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| T |
13212416 |
attttaaacactgcataactaattagtgcttcacctttcaaaattgtatttgttatagggttattatttattgtacgtaattttatactctact--gtgt |
13212513 |
T |
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| Q |
122 |
tctgtaatgaaattttcagctcaatgaacaatgatgtttctactctactgtgtaggttctatttgtccacaaatatagtggttctatggctcttgaaact |
221 |
Q |
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| T |
13212514 |
tctgtaatgaaattttcagctcaatgaacaatgatgtttctactctactgtgtaggttctatttgtccacaaatatagtggttctatggctcttgaaact |
13212613 |
T |
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| Q |
222 |
gcaatccccataaccctaagttattttctctcatctgcaactatgatctatgct |
275 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
13212614 |
gcaatccccataaccctaagttattttctctcatctgcaactctgatctatgct |
13212667 |
T |
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