View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8186_low_74 (Length: 240)
Name: NF8186_low_74
Description: NF8186
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8186_low_74 |
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Alignment Details
Target: chr2 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 8483903 - 8484123
Alignment:
| Q |
1 |
ttatgagttaagctttttagagtttaagaaataagatgaaacgtatggattaaattggtggatttggtacatttatagtgagctcgaatgacgaagtaat |
100 |
Q |
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| T |
8483903 |
ttatgagttaagctttttagagtttaagaaatgagatgaaacgtatgtattaaattggtggatttggtacatttatagtgagctcgaatgaccaagttat |
8484002 |
T |
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| Q |
101 |
tcaa-gaggatcagaattcaaatcatatataaatattggtaaggttttacttacctttacatctccgttgaactcaatattacaaaggtttctgctctaa |
199 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8484003 |
tcaaagaggatcagaattcaaatcatatataaatattggtaaggttttacttacctttacatctccgttgaactcaatattacaaaggtttctgctctaa |
8484102 |
T |
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| Q |
200 |
aatcggataattaaaataaaaa |
221 |
Q |
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||| |||||||||||||||||| |
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| T |
8484103 |
aat-ggataattaaaataaaaa |
8484123 |
T |
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