View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8186_low_84 (Length: 231)
Name: NF8186_low_84
Description: NF8186
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8186_low_84 |
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Alignment Details
Target: chr8 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 23 - 212
Target Start/End: Original strand, 5054454 - 5054634
Alignment:
| Q |
23 |
tctccaataatatcttatgccatatcttactctttttctctttcatttgaacacttcatcatcagacatatattctaaccctcactcatcacatcacatc |
122 |
Q |
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| T |
5054454 |
tctccaatcatatcttatgccatatcttactctttttctctttcatttgaacacttcatcatcaaacatatattctaaccctcact-----catcacatc |
5054548 |
T |
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| Q |
123 |
acaatacttgttacatacatacatactagatattctccagttacaaagattgggttttccacattatctgggttcgttgggtcccttatt |
212 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |
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| T |
5054549 |
acaatacttgt----tacatacatactagatattctccagttacaaagattgggttttccacattgtttgggttcgttgggtcccttatt |
5054634 |
T |
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