View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8186_low_86 (Length: 227)
Name: NF8186_low_86
Description: NF8186
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8186_low_86 |
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Alignment Details
Target: chr1 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 16 - 215
Target Start/End: Original strand, 2532534 - 2532734
Alignment:
| Q |
16 |
taatcaatcaatgtgttatacttatacgtttgagatttagatcataatgagcaaaatacaatccagcaaatagaaatagagtcccattttccctaaccca |
115 |
Q |
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| T |
2532534 |
taatcaatcaatgtgttatacttatacgtttgagatttagatcataatgagcaaaatacaatccagcaaatagaaatagagtcccattttccctaaccca |
2532633 |
T |
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| Q |
116 |
atggcttcaaatatattttcttaaagagtcgattacatgtacggtagtaaaggagatgttc-ataatccaagattgggagttgagacatttcatgattca |
214 |
Q |
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| T |
2532634 |
atggcttcaaatatatttttttaaagagtcgattacatgtacgttagtaaaggagatgttcaataatccaagattgggagtcgagacatttcatgattca |
2532733 |
T |
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| Q |
215 |
t |
215 |
Q |
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| T |
2532734 |
t |
2532734 |
T |
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