View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8187_low_11 (Length: 217)
Name: NF8187_low_11
Description: NF8187
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8187_low_11 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 18164399 - 18164183
Alignment:
| Q |
1 |
ttttctttccggcgacaatgaaactttgagttaatagtttagatataaaactagaatttatagtattcagatacacacagattacataaaatctcattgg |
100 |
Q |
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| T |
18164399 |
ttttctttccggcgacaatgaaactttgagttaatagtttagatataaaactagaatttatagtattcagatacacacagattacataaaatctcattgg |
18164300 |
T |
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| Q |
101 |
agatgttgctaatctccttttactatgcaataattttgaaaatttcttttcatgcttatactagatgcagatcataatgaatgcacacccaaaggaatga |
200 |
Q |
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| T |
18164299 |
agatgttgctaatctccttttactatgcaataattttgaaaatttcttttcatgcttatactagatgcagatcataatgaatgcacacccaaaggaatga |
18164200 |
T |
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| Q |
201 |
aagaaacaatacaaaac |
217 |
Q |
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||||||||||||||||| |
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| T |
18164199 |
aagaaacaatacaaaac |
18164183 |
T |
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