View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8188_high_4 (Length: 286)
Name: NF8188_high_4
Description: NF8188
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8188_high_4 |
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Alignment Details
Target: chr8 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 2 - 262
Target Start/End: Original strand, 4656999 - 4657259
Alignment:
| Q |
2 |
tttattcataatccaaatttagatacaagactttcagctctgtatcttttagtttaaaccaattgaattactcaactttccttacttacaaatggttgat |
101 |
Q |
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|||| ||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4656999 |
tttactcatagtccaactttaaatacaagactttcagctctgtatcttttagtttaaaccaattgaattactcaactttccttacttacaaatggttgat |
4657098 |
T |
|
| Q |
102 |
attatttgttatatattgtagctctgtcgattttttctcctactctaactaatgcttccttcaagccaaataagaatctattgtttcctttgtgatgtgc |
201 |
Q |
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|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
4657099 |
attatttgctatatattgtagctctgtcgattttttctcctactctaactaatgcttccttcaagccaaataagaatctattgtttcctttgttatgtgc |
4657198 |
T |
|
| Q |
202 |
ttctttcgcttattataagtgtttcatttgaattgtgcgcaatttttatgatgattaattg |
262 |
Q |
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||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
4657199 |
ttctttcgcttattataagtgtttcatttgagttgtgcgcaatttttatgatgattaattg |
4657259 |
T |
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