View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8190_high_9 (Length: 211)
Name: NF8190_high_9
Description: NF8190
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8190_high_9 |
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Alignment Details
Target: chr8 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 17 - 159
Target Start/End: Original strand, 40276988 - 40277129
Alignment:
| Q |
17 |
aaaatcccaccaaattcggcatcatctgcttcattgtgtaacagatttgttcnnnnnnnnnnnnnnnnnnnnnnaataagtaacatatttctgtttttgg |
116 |
Q |
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| T |
40276988 |
aaaatcccaccaaattcggcatcatctgcttcattgtgtaacagatttgttcttttttgttttgttttgtttg-aataagtaacatatttctgtttttgg |
40277086 |
T |
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| Q |
117 |
gcaaggaataattgtaacgtatcttagattactagcagaaata |
159 |
Q |
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| T |
40277087 |
gcaaggaataattgtaacgtatcttagattactagcagaaata |
40277129 |
T |
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