View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8190_low_7 (Length: 276)
Name: NF8190_low_7
Description: NF8190
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8190_low_7 |
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Alignment Details
Target: chr5 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 16 - 193
Target Start/End: Original strand, 43142572 - 43142752
Alignment:
| Q |
16 |
acattctcttatgaaaatacgtggttcataagagaatgtgcgaacattaacaatgatggttgaagtgagttaaaaggggacaatcatagaa---agagag |
112 |
Q |
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| T |
43142572 |
acattctcttatgaaaataagtggttcataagagaatgtgtgaacattaacaatgatggttgaaatgagttaaaaggggacaaccatagaataaagagag |
43142671 |
T |
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| Q |
113 |
gagtggcaaagagaacaaaaccatgctacgtactaataccatcaattagtgttctcaaacaaagtgcgttcaattgtgtaa |
193 |
Q |
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| T |
43142672 |
gagtggcaaagagaacaaaaccatgctatgtactaataccatcaattagtgttctcaaacaaattgcgttcaattgtgtaa |
43142752 |
T |
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