View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8191_low_19 (Length: 255)
Name: NF8191_low_19
Description: NF8191
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8191_low_19 |
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Alignment Details
Target: chr7 (Bit Score: 171; Significance: 6e-92; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 26023044 - 26022810
Alignment:
| Q |
1 |
tgaagtggagtggattttgcctctcccatctccccgcaaaacaaagacacccgccccattgcttctcatggtttgaatttggtcttcatccttcccctca |
100 |
Q |
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| T |
26023044 |
tgaagcggagtggattttgcctcccccatctccctgtaaaacaaagacacccgccccattgcttctcatggtttgaatttggtcttcatccttcccctca |
26022945 |
T |
|
| Q |
101 |
acgaaaatgggtttcctagcccgcttacgaccatgcccatgcgaaaagnnnnnnnnnttcatagtgtcatgcgttccaagttccaacacggatccaaaac |
200 |
Q |
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||||||| ||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |
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| T |
26022944 |
acgaaaacgggtttcctagcccgcttacggccatgcccatgcgaaaagaaaaaaaaattc--agtgtcatgcgttccaagttccaacacggatccaaaac |
26022847 |
T |
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| Q |
201 |
acttaactttgattccgcggctggaacttcacttttt |
237 |
Q |
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||||||||||| ||||||||||||||||||||||||| |
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| T |
26022846 |
acttaactttggttccgcggctggaacttcacttttt |
26022810 |
T |
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