View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8191_low_23 (Length: 238)
Name: NF8191_low_23
Description: NF8191
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8191_low_23 |
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Alignment Details
Target: chr7 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 26023429 - 26023633
Alignment:
| Q |
1 |
aataattttctctagtgagtgtactgtactactaccccaaatgaaaggacaagtttcatcacacaaacagaagtagggatgcacgtatctctataagagc |
100 |
Q |
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| T |
26023429 |
aataattttctctagtgagtgta-----ctactaccccaaatgaaaggacaagcttcatcacacaaacagaagtagggatgcacgtatctctataagagc |
26023523 |
T |
|
| Q |
101 |
agattgtacaagagtaactctatccgtaaagagagcaaagatgacctttcaaggagaaagctttttccttcataaggtccaccatgtggcatgtgacata |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
26023524 |
agattgtacaagagtaactctatccgtaaagagagcaaagatgacctttcaaggagaaagctttttccttcataaggtccac-------catgtgacata |
26023616 |
T |
|
| Q |
201 |
aaagttgatcttggtag |
217 |
Q |
| |
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||||||||||||||||| |
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| T |
26023617 |
aaagttgatcttggtag |
26023633 |
T |
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