View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8195_high_13 (Length: 206)
Name: NF8195_high_13
Description: NF8195
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8195_high_13 |
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Alignment Details
Target: chr3 (Bit Score: 168; Significance: 3e-90; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 16 - 183
Target Start/End: Original strand, 40295805 - 40295972
Alignment:
| Q |
16 |
aagaagagcagtgagaaattggagaatgtggactgggaggatgttatcactctcttggatgataacgaatggccagaaaatacaccaagtttcaggtaca |
115 |
Q |
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| T |
40295805 |
aagaagagcagtgagaaattggagaatgtggactgggaggatgttatcactctcttggatgataacgaatggccagaaaatacaccaagtttcaggtaca |
40295904 |
T |
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| Q |
116 |
aagcaaatcaaatgttctttccaagtaaaagttagtcaagcatattgatatcagaaagaacaccacct |
183 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40295905 |
aagcaaatcaaatgttctttccaagtaaaagttagtcaagcatattgatatcagaaagaacaccacct |
40295972 |
T |
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