View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8195_low_15 (Length: 214)

Name: NF8195_low_15
Description: NF8195
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8195_low_15
NF8195_low_15
[»] chr5 (6 HSPs)
chr5 (1-147)||(9902287-9902433)
chr5 (144-187)||(23257199-23257242)
chr5 (144-187)||(21825240-21825284)
chr5 (1-119)||(9882716-9882835)
chr5 (144-187)||(26397286-26397329)
chr5 (144-187)||(37268367-37268410)
[»] chr6 (3 HSPs)
chr6 (144-187)||(18489770-18489813)
chr6 (144-187)||(16477626-16477670)
chr6 (155-187)||(14781983-14782015)
[»] chr3 (3 HSPs)
chr3 (144-187)||(41748803-41748846)
chr3 (144-187)||(10773271-10773314)
chr3 (148-187)||(30045283-30045322)
[»] chr2 (5 HSPs)
chr2 (144-187)||(45468150-45468193)
chr2 (144-184)||(26438382-26438422)
chr2 (144-187)||(22653877-22653920)
chr2 (144-187)||(45701188-45701231)
chr2 (146-187)||(28157739-28157780)
[»] chr8 (2 HSPs)
chr8 (144-187)||(29934729-29934772)
chr8 (143-187)||(9018100-9018144)
[»] chr7 (7 HSPs)
chr7 (144-187)||(45140133-45140176)
chr7 (144-187)||(6459128-6459171)
chr7 (144-183)||(13427953-13427992)
chr7 (144-187)||(22681441-22681484)
chr7 (144-187)||(38889959-38890002)
chr7 (148-187)||(39321910-39321949)
chr7 (156-184)||(38651340-38651368)
[»] chr1 (3 HSPs)
chr1 (144-187)||(7637638-7637681)
chr1 (144-187)||(20819603-20819646)
chr1 (144-187)||(24509317-24509360)
[»] chr4 (9 HSPs)
chr4 (146-187)||(42396697-42396738)
chr4 (144-187)||(13159699-13159742)
chr4 (148-187)||(14453918-14453957)
chr4 (144-187)||(17186304-17186347)
chr4 (144-187)||(22322413-22322456)
chr4 (144-187)||(26893380-26893423)
chr4 (144-187)||(44546662-44546705)
chr4 (144-187)||(46191195-46191238)
chr4 (146-187)||(53084602-53084643)
[»] scaffold0153 (1 HSPs)
scaffold0153 (148-187)||(24976-25015)
[»] scaffold1251 (1 HSPs)
scaffold1251 (144-184)||(861-901)


Alignment Details
Target: chr5 (Bit Score: 139; Significance: 6e-73; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 9902287 - 9902433
Alignment:
Q  1 cataacaataaattataaaatttagagtcaatatgggtccagaaaccatccaaagttcaagtatcattttttctaccatctgaaaacttaacaacaaccg 100  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  9902287 cataacaataaattataaaattcagagtcaatatgggtccagaaaccatccaaagtccaagtatcattttttctaccatctgaaaacttaacaacaaccg 9902386  T
Q  101 gataaaaatcaaatctcatagtttttgatgcactaatgttggttgaa 147  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  9902387 gataaaaatcaaatctcatagtttttgatgcactaatgttggttgaa 9902433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 187
Target Start/End: Original strand, 23257199 - 23257242
Alignment:
Q  144 tgaatcacctttcttttgaacaatatattccattttgatttgtt 187  Q
    |||||||| |||| ||||||||||||||||||||||||||||||    
T  23257199 tgaatcacttttcgtttgaacaatatattccattttgatttgtt 23257242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 187
Target Start/End: Original strand, 21825240 - 21825284
Alignment:
Q  144 tgaatcaccttt-cttttgaacaatatattccattttgatttgtt 187  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||    
T  21825240 tgaatcaccttttcttttgagcaatatattccattttgatttgtt 21825284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 9882716 - 9882835
Alignment:
Q  1 cataacaataaattataaaatttagagtcaata-tgggtccagaaaccatccaaagttcaagtatcattttttctaccatctgaaaacttaacaacaacc 99  Q
    |||||||||||||||||||||| ||| ||||||  ||| ||| |||||||| ||||| ||| || || | ||  || ||| || ||||||| |||||||     
T  9882716 cataacaataaattataaaattgagaatcaatacagggcccaaaaaccatctaaagtccaaatagcactgttaataacatgtggaaacttaccaacaact 9882815  T
Q  100 ggataaaaatcaaatctcat 119  Q
    |||| |||||||| ||||||    
T  9882816 ggatcaaaatcaagtctcat 9882835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 187
Target Start/End: Complemental strand, 26397329 - 26397286
Alignment:
Q  144 tgaatcacctttcttttgaacaatatattccattttgatttgtt 187  Q
    ||||||||  ||||||||| ||||||||||||||||||||||||    
T  26397329 tgaatcactcttcttttgagcaatatattccattttgatttgtt 26397286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 187
Target Start/End: Original strand, 37268367 - 37268410
Alignment:
Q  144 tgaatcacctttcttttgaacaatatattccattttgatttgtt 187  Q
    |||||||| |||| ||||| ||||||||||||||||||||||||    
T  37268367 tgaatcacttttcctttgagcaatatattccattttgatttgtt 37268410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 144 - 187
Target Start/End: Original strand, 18489770 - 18489813
Alignment:
Q  144 tgaatcacctttcttttgaacaatatattccattttgatttgtt 187  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  18489770 tgaatcacctttcttttgagcaatatattccattttgatttgtt 18489813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 187
Target Start/End: Complemental strand, 16477670 - 16477626
Alignment:
Q  144 tgaatcaccttt-cttttgaacaatatattccattttgatttgtt 187  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||    
T  16477670 tgaatcaccttttcttttgagcaatatattccattttgatttgtt 16477626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 187
Target Start/End: Complemental strand, 14782015 - 14781983
Alignment:
Q  155 tcttttgaacaatatattccattttgatttgtt 187  Q
    |||||||| ||||||||||||||||||||||||    
T  14782015 tcttttgagcaatatattccattttgatttgtt 14781983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 144 - 187
Target Start/End: Original strand, 41748803 - 41748846
Alignment:
Q  144 tgaatcacctttcttttgaacaatatattccattttgatttgtt 187  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  41748803 tgaaccacctttcttttgaacaatatattccattttgatttgtt 41748846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 187
Target Start/End: Original strand, 10773271 - 10773314
Alignment:
Q  144 tgaatcacctttcttttgaacaatatattccattttgatttgtt 187  Q
    ||||||||||||||||||| |||||||| |||||||||||||||    
T  10773271 tgaatcacctttcttttgagcaatatatcccattttgatttgtt 10773314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 187
Target Start/End: Original strand, 30045283 - 30045322
Alignment:
Q  148 tcacctttcttttgaacaatatattccattttgatttgtt 187  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  30045283 tcacctttcttttgagcaatatatcccattttgatttgtt 30045322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 144 - 187
Target Start/End: Complemental strand, 45468193 - 45468150
Alignment:
Q  144 tgaatcacctttcttttgaacaatatattccattttgatttgtt 187  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  45468193 tgaatcacttttcttttgaacaatatattccattttgatttgtt 45468150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 26438382 - 26438422
Alignment:
Q  144 tgaatcacctttcttttgaacaatatattccattttgattt 184  Q
    |||||||||||||||||||||||||||||||| ||| ||||    
T  26438382 tgaatcacctttcttttgaacaatatattccaatttaattt 26438422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 187
Target Start/End: Complemental strand, 22653920 - 22653877
Alignment:
Q  144 tgaatcacctttcttttgaacaatatattccattttgatttgtt 187  Q
    |||||||||||  |||||| ||||||||||||||||||||||||    
T  22653920 tgaatcaccttagttttgagcaatatattccattttgatttgtt 22653877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 187
Target Start/End: Complemental strand, 45701231 - 45701188
Alignment:
Q  144 tgaatcacctttcttttgaacaatatattccattttgatttgtt 187  Q
    |||||||| |||||||| | ||||||||||||||||||||||||    
T  45701231 tgaatcacttttcttttaagcaatatattccattttgatttgtt 45701188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 146 - 187
Target Start/End: Original strand, 28157739 - 28157780
Alignment:
Q  146 aatcacctttcttttgaacaatatattccattttgatttgtt 187  Q
    ||||||||||||||| | |||||||||||||||| |||||||    
T  28157739 aatcacctttcttttaagcaatatattccattttaatttgtt 28157780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 187
Target Start/End: Original strand, 29934729 - 29934772
Alignment:
Q  144 tgaatcacctttcttttgaacaatatattccattttgatttgtt 187  Q
    |||||||||| |||||||| ||||||||||||||||||||||||    
T  29934729 tgaatcacctctcttttgagcaatatattccattttgatttgtt 29934772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 9018100 - 9018144
Alignment:
Q  143 ttgaatcacctttcttttgaacaatatattccattttgatttgtt 187  Q
    ||||||||| || ||||||| |||||||||||||||| |||||||    
T  9018100 ttgaatcactttgcttttgagcaatatattccattttaatttgtt 9018144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000002; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 187
Target Start/End: Complemental strand, 45140176 - 45140133
Alignment:
Q  144 tgaatcacctttcttttgaacaatatattccattttgatttgtt 187  Q
    |||||||||||||||||||||||||||| ||||||| |||||||    
T  45140176 tgaatcacctttcttttgaacaatatatcccattttaatttgtt 45140133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 187
Target Start/End: Original strand, 6459128 - 6459171
Alignment:
Q  144 tgaatcacctttcttttgaacaatatattccattttgatttgtt 187  Q
    |||||||| |||||||||| ||||||||| ||||||||||||||    
T  6459128 tgaatcacttttcttttgagcaatatatttcattttgatttgtt 6459171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 183
Target Start/End: Complemental strand, 13427992 - 13427953
Alignment:
Q  144 tgaatcacctttcttttgaacaatatattccattttgatt 183  Q
    ||||||||||||||||||| ||||||||| ||||||||||    
T  13427992 tgaatcacctttcttttgagcaatatatttcattttgatt 13427953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 187
Target Start/End: Complemental strand, 22681484 - 22681441
Alignment:
Q  144 tgaatcacctttcttttgaacaatatattccattttgatttgtt 187  Q
    ||||||||  ||||||||| ||||||||||||||||||||||||    
T  22681484 tgaatcactcttcttttgagcaatatattccattttgatttgtt 22681441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 187
Target Start/End: Original strand, 38889959 - 38890002
Alignment:
Q  144 tgaatcacctttcttttgaacaatatattccattttgatttgtt 187  Q
    ||||||||||||||||||| |||||||||| ||||| |||||||    
T  38889959 tgaatcacctttcttttgagcaatatattctattttaatttgtt 38890002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 187
Target Start/End: Complemental strand, 39321949 - 39321910
Alignment:
Q  148 tcacctttcttttgaacaatatattccattttgatttgtt 187  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  39321949 tcacctttcttttgagcaatatatcccattttgatttgtt 39321910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 184
Target Start/End: Original strand, 38651340 - 38651368
Alignment:
Q  156 cttttgaacaatatattccattttgattt 184  Q
    |||||||||||||||||||||||||||||    
T  38651340 cttttgaacaatatattccattttgattt 38651368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000002; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 187
Target Start/End: Complemental strand, 7637681 - 7637638
Alignment:
Q  144 tgaatcacctttcttttgaacaatatattccattttgatttgtt 187  Q
    ||||||||||||||||||| |||||||| |||||||||||||||    
T  7637681 tgaatcacctttcttttgagcaatatatcccattttgatttgtt 7637638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 187
Target Start/End: Complemental strand, 20819646 - 20819603
Alignment:
Q  144 tgaatcacctttcttttgaacaatatattccattttgatttgtt 187  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  20819646 tgaatcacttttcttttgagcaatatattccattttgatttgtt 20819603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 187
Target Start/End: Complemental strand, 24509360 - 24509317
Alignment:
Q  144 tgaatcacctttcttttgaacaatatattccattttgatttgtt 187  Q
    ||||||||  ||||||||| ||||||||||||||||||||||||    
T  24509360 tgaatcactcttcttttgagcaatatattccattttgatttgtt 24509317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000003; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 187
Target Start/End: Complemental strand, 42396738 - 42396697
Alignment:
Q  146 aatcacctttcttttgaacaatatattccattttgatttgtt 187  Q
    ||||||||||||||||| |||||||||||||||| |||||||    
T  42396738 aatcacctttcttttgagcaatatattccattttaatttgtt 42396697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 187
Target Start/End: Complemental strand, 13159742 - 13159699
Alignment:
Q  144 tgaatcacctttcttttgaacaatatattccattttgatttgtt 187  Q
    |||||||| |||| ||||| ||||||||||||||||||||||||    
T  13159742 tgaatcacttttcgtttgagcaatatattccattttgatttgtt 13159699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 187
Target Start/End: Complemental strand, 14453957 - 14453918
Alignment:
Q  148 tcacctttcttttgaacaatatattccattttgatttgtt 187  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  14453957 tcacctttcttttgagcaatatatcccattttgatttgtt 14453918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 187
Target Start/End: Original strand, 17186304 - 17186347
Alignment:
Q  144 tgaatcacctttcttttgaacaatatattccattttgatttgtt 187  Q
    ||||||||  ||||||||| ||||||||||||||||||||||||    
T  17186304 tgaatcactcttcttttgagcaatatattccattttgatttgtt 17186347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 187
Target Start/End: Complemental strand, 22322456 - 22322413
Alignment:
Q  144 tgaatcacctttcttttgaacaatatattccattttgatttgtt 187  Q
    |||||||| || |||||||||||| |||||||||||||||||||    
T  22322456 tgaatcactttgcttttgaacaatttattccattttgatttgtt 22322413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 187
Target Start/End: Original strand, 26893380 - 26893423
Alignment:
Q  144 tgaatcacctttcttttgaacaatatattccattttgatttgtt 187  Q
    ||||| ||||||||||||| ||||| ||||||||||||||||||    
T  26893380 tgaattacctttcttttgagcaatacattccattttgatttgtt 26893423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 187
Target Start/End: Original strand, 44546662 - 44546705
Alignment:
Q  144 tgaatcacctttcttttgaacaatatattccattttgatttgtt 187  Q
    |||||||| |||| ||||| ||||||||||||||||||||||||    
T  44546662 tgaatcacttttcctttgagcaatatattccattttgatttgtt 44546705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 187
Target Start/End: Complemental strand, 46191238 - 46191195
Alignment:
Q  144 tgaatcacctttcttttgaacaatatattccattttgatttgtt 187  Q
    |||||||| |||| ||||| ||||||||||||||||||||||||    
T  46191238 tgaatcacttttcgtttgagcaatatattccattttgatttgtt 46191195  T

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Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 146 - 187
Target Start/End: Complemental strand, 53084643 - 53084602
Alignment:
Q  146 aatcacctttcttttgaacaatatattccattttgatttgtt 187  Q
    ||||||||||||||||| || ||||||||||||| |||||||    
T  53084643 aatcacctttcttttgagcattatattccattttaatttgtt 53084602  T

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Target: scaffold0153 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 187
Target Start/End: Original strand, 24976 - 25015
Alignment:
Q  148 tcacctttcttttgaacaatatattccattttgatttgtt 187  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  24976 tcacctttcttttgagcaatatatcccattttgatttgtt 25015  T

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Target: scaffold1251 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1251
Description:

Target: scaffold1251; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 901 - 861
Alignment:
Q  144 tgaatcacctttcttttgaacaatatattccattttgattt 184  Q
    |||||||| |||| ||||| |||||||||||||||||||||    
T  901 tgaatcacttttcatttgagcaatatattccattttgattt 861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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