View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8199_high_49 (Length: 215)
Name: NF8199_high_49
Description: NF8199
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8199_high_49 |
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Alignment Details
Target: chr4 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 17 - 148
Target Start/End: Original strand, 107711 - 107842
Alignment:
| Q |
17 |
agaaaaaagtcaatatcatttcattaagaacaatatagctgaaatacaagatagaaagtgaaaaatttggtgactagtctacaatacagcttttgtcact |
116 |
Q |
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| T |
107711 |
agaaaaaagtcaatatcatttcattaagaacaatatagctgaaatacaagatagaaagtgaaaaatttggtgactagtctacaatacagcttttgtcact |
107810 |
T |
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| Q |
117 |
gaatgaaattaatcaaaaagtttgaaaagaaa |
148 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
107811 |
gaatgaaattaatcaaaaagtttgaaaagaaa |
107842 |
T |
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