View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8199_low_54 (Length: 252)
Name: NF8199_low_54
Description: NF8199
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8199_low_54 |
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Alignment Details
Target: chr8 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 30668134 - 30667897
Alignment:
| Q |
1 |
ttttgtaacgatgacaataacacattaacacgttatttgatcatttgaaatcagttagtttggatcccccaaaatttgccgatgccaggccaagagagca |
100 |
Q |
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| T |
30668134 |
ttttgtaacgatgacaataacacattaacacgtcatttgatcatttgaaatcagttagtttggatcccccaaaattagccgatgccaagccaagagagca |
30668035 |
T |
|
| Q |
101 |
ttgttcaactgtgacaactcttgagctggcttcccatcatctttgggtagcagtaaaatgacctgatattcggccttaaatctgccacatcaatacagtg |
200 |
Q |
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| T |
30668034 |
ttgttcaaccatgacaactcttaagctggcttcccatcgtctttgggtagcagtaaaatgacctgatattcagccttaaatctgccacatcaatacagtg |
30667935 |
T |
|
| Q |
201 |
ctaaaagcgtcacaactcactaatggatggcatggata |
238 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
30667934 |
ctaaaagcgtcacaactcactaatggatggcatggata |
30667897 |
T |
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