View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8200_high_14 (Length: 320)
Name: NF8200_high_14
Description: NF8200
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8200_high_14 |
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Alignment Details
Target: chr1 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 20 - 258
Target Start/End: Original strand, 41604583 - 41604821
Alignment:
| Q |
20 |
cttagttgtatcaaatttgaaatctccatttctgtccatctatgaatattatccacactttcaaaagggtattcatgatttgttgtatcatttgcttctt |
119 |
Q |
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| T |
41604583 |
cttagttgtatcaaatttgaaatctccatttctgtccatctatgaatattatccacactttcaaaagggtattcataatttgttgtatcatttgcttctt |
41604682 |
T |
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| Q |
120 |
ggctcttactcttatttggtgcttcaagttgtatcccaatatgttttcttacaacttctaacaatgcagaatctcttgcttcaacccatgctttttcttt |
219 |
Q |
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| T |
41604683 |
ggctcttactcttatttggtgcttcaagttgtatcccaatatgttttcttacaacttctaacaatgcagaatctcttgcttcaacccatgctttttcttt |
41604782 |
T |
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| Q |
220 |
agcccaaagttcatgtatttcttgatcaaacctcattga |
258 |
Q |
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| T |
41604783 |
agcccaaagttcatgtatttcttgatcaaacctcattga |
41604821 |
T |
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