View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8200_high_25 (Length: 251)
Name: NF8200_high_25
Description: NF8200
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8200_high_25 |
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Alignment Details
Target: chr7 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 65 - 235
Target Start/End: Original strand, 4520929 - 4521094
Alignment:
| Q |
65 |
agaaaaactaatgaattaatgagaaaatcttgtccctcaaatatctacatcaagaataagcaacaattgagtgagatgacgaatcaactccttcaccctc |
164 |
Q |
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| T |
4520929 |
agaaaaactaatgaattaatcagaaaatcttgtccctcgaatatctacatcaagaataagctacaattgagagagatgacgaatcaactccttcaccctc |
4521028 |
T |
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| Q |
165 |
cagtccacgccattagtactcgcgatgaggtgtggttctgagcctgggcaagaagggcggccgcccaagac |
235 |
Q |
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| T |
4521029 |
cat-----gccattagtacccgcgatgaggtgtggttctgagcatgggcaagaagggcagctgcccaagac |
4521094 |
T |
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