View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8200_low_38 (Length: 231)
Name: NF8200_low_38
Description: NF8200
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8200_low_38 |
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Alignment Details
Target: chr2 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 10 - 209
Target Start/End: Complemental strand, 708989 - 708790
Alignment:
| Q |
10 |
tatattattcttaattgatgaaaaggaacaccatttgtttagcagaaatggaaatgatttggaaatttgtgttaggattcctctattagatgcacttgca |
109 |
Q |
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| T |
708989 |
tatagtattcttaattgatgaaaaggaacaccatttgtttagcagaaatggaaatgatttggaaatttgtgttaggattcctctattagatgcacttgca |
708890 |
T |
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| Q |
110 |
gggtgctccatgccaattcctctattaggaggtgaaaaaatgaatttagcatttgagaatactgtcatatatcctggttttgagaaggttattgaaggtc |
209 |
Q |
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| T |
708889 |
gggtgctccatgccaattcctctattaggaggtgaaaaaatgaatttagcatttgagaatactgtcatatatcctggttttgagaaggttattgaaggtc |
708790 |
T |
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