View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8201_low_3 (Length: 269)

Name: NF8201_low_3
Description: NF8201
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8201_low_3
NF8201_low_3
[»] chr7 (41 HSPs)
chr7 (24-243)||(18788459-18788678)
chr7 (37-243)||(29186664-29186870)
chr7 (25-243)||(44420423-44420640)
chr7 (25-204)||(43113713-43113892)
chr7 (25-243)||(19217627-19217845)
chr7 (25-243)||(29187930-29188148)
chr7 (25-244)||(9391518-9391737)
chr7 (25-243)||(43962469-43962687)
chr7 (25-243)||(44417457-44417675)
chr7 (35-244)||(13750546-13750755)
chr7 (25-189)||(9392715-9392879)
chr7 (25-200)||(18787191-18787366)
chr7 (25-199)||(45399910-45400084)
chr7 (35-204)||(7011672-7011842)
chr7 (35-204)||(7027030-7027200)
chr7 (25-243)||(48793416-48793634)
chr7 (35-204)||(27072564-27072733)
chr7 (35-204)||(27205580-27205749)
chr7 (38-204)||(44746765-44746931)
chr7 (35-243)||(48792443-48792651)
chr7 (25-203)||(12630603-12630782)
chr7 (25-165)||(44748463-44748603)
chr7 (25-176)||(43961000-43961151)
chr7 (35-249)||(37237138-37237349)
chr7 (42-204)||(3537465-3537627)
chr7 (35-204)||(32519659-32519828)
chr7 (25-204)||(13597183-13597361)
chr7 (39-204)||(32518460-32518616)
chr7 (45-204)||(44230466-44230625)
chr7 (35-165)||(26005429-26005559)
chr7 (132-239)||(12630507-12630614)
chr7 (35-204)||(3538483-3538642)
chr7 (25-162)||(43114987-43115124)
chr7 (26-93)||(13599158-13599225)
chr7 (35-88)||(37235939-37235992)
chr7 (35-83)||(44231771-44231819)
chr7 (115-177)||(37235879-37235941)
chr7 (113-157)||(13599246-13599290)
chr7 (35-74)||(9357706-9357745)
chr7 (150-245)||(45688865-45688960)
chr7 (35-95)||(45398671-45398731)
[»] chr4 (33 HSPs)
chr4 (25-204)||(7261443-7261622)
chr4 (25-204)||(22623043-22623222)
chr4 (25-204)||(22621906-22622085)
chr4 (25-204)||(34095559-34095738)
chr4 (25-204)||(38032320-38032499)
chr4 (25-243)||(8815257-8815475)
chr4 (26-245)||(10802887-10803106)
chr4 (25-204)||(38031207-38031386)
chr4 (37-204)||(5433319-5433486)
chr4 (25-184)||(17356420-17356579)
chr4 (37-204)||(8814174-8814340)
chr4 (42-204)||(48499403-48499565)
chr4 (35-204)||(56234931-56235099)
chr4 (25-200)||(18091623-18091798)
chr4 (25-204)||(23757870-23758050)
chr4 (108-204)||(56233763-56233859)
chr4 (35-243)||(10804105-10804313)
chr4 (40-204)||(17357778-17357942)
chr4 (25-204)||(48501224-48501402)
chr4 (69-204)||(35193140-35193275)
chr4 (38-204)||(35191856-35192019)
chr4 (25-142)||(35927016-35927133)
chr4 (37-93)||(36074706-36074762)
chr4 (25-93)||(48081467-48081535)
chr4 (132-204)||(48081597-48081669)
chr4 (25-93)||(35925841-35925909)
chr4 (137-200)||(48080313-48080376)
chr4 (150-204)||(48081555-48081609)
chr4 (167-243)||(48463026-48463102)
chr4 (167-204)||(34121338-34121375)
chr4 (35-79)||(48081290-48081334)
chr4 (26-73)||(56233878-56233925)
chr4 (35-79)||(34122731-34122775)
[»] chr3 (56 HSPs)
chr3 (25-243)||(31937035-31937253)
chr3 (42-244)||(31938224-31938426)
chr3 (36-204)||(21727949-21728117)
chr3 (25-204)||(28776487-28776666)
chr3 (25-204)||(28777587-28777766)
chr3 (25-240)||(52521930-52522144)
chr3 (25-241)||(43393953-43394170)
chr3 (25-204)||(46903524-46903703)
chr3 (25-204)||(47431087-47431266)
chr3 (25-242)||(35759131-35759348)
chr3 (25-204)||(2233205-2233384)
chr3 (25-204)||(17116241-17116419)
chr3 (25-204)||(46902370-46902549)
chr3 (25-243)||(23073274-23073492)
chr3 (45-243)||(54353023-54353221)
chr3 (44-204)||(17742211-17742372)
chr3 (44-204)||(19043531-19043692)
chr3 (25-157)||(37610663-37610795)
chr3 (25-184)||(17740889-17741048)
chr3 (25-184)||(19042209-19042368)
chr3 (42-204)||(52525276-52525438)
chr3 (42-200)||(54354308-54354466)
chr3 (35-204)||(2232641-2232810)
chr3 (35-204)||(21729098-21729267)
chr3 (25-242)||(37609322-37609539)
chr3 (39-204)||(53180718-53180883)
chr3 (35-204)||(55209821-55209989)
chr3 (44-204)||(5691014-5691173)
chr3 (35-200)||(11346855-11347020)
chr3 (26-177)||(5689785-5689936)
chr3 (35-242)||(53765876-53766083)
chr3 (35-243)||(10979085-10979293)
chr3 (112-243)||(23091191-23091322)
chr3 (25-243)||(11348372-11348589)
chr3 (35-200)||(47917523-47917687)
chr3 (108-204)||(53764467-53764563)
chr3 (25-165)||(35758082-35758222)
chr3 (37-204)||(50881028-50881188)
chr3 (26-204)||(47429666-47429839)
chr3 (37-200)||(15290402-15290564)
chr3 (110-204)||(53178740-53178834)
chr3 (131-204)||(43392665-43392738)
chr3 (25-162)||(55210808-55210945)
chr3 (111-204)||(17117387-17117478)
chr3 (25-148)||(50879782-50879905)
chr3 (111-204)||(46986077-46986169)
chr3 (42-155)||(10978093-10978206)
chr3 (131-204)||(23072099-23072171)
chr3 (113-182)||(33113306-33113376)
chr3 (37-82)||(43392767-43392812)
chr3 (25-89)||(33111745-33111809)
chr3 (42-89)||(53764904-53764951)
chr3 (167-204)||(27750473-27750510)
chr3 (143-204)||(50879533-50879594)
chr3 (35-80)||(53101685-53101730)
chr3 (132-168)||(47429642-47429678)
[»] chr6 (19 HSPs)
chr6 (25-251)||(34995344-34995569)
chr6 (25-204)||(32348937-32349116)
chr6 (25-204)||(34996661-34996840)
chr6 (26-245)||(3000694-3000913)
chr6 (25-243)||(32713783-32714001)
chr6 (35-204)||(11801252-11801421)
chr6 (25-204)||(32347847-32348026)
chr6 (25-253)||(18572875-18573102)
chr6 (25-204)||(32712394-32712573)
chr6 (26-189)||(19383056-19383218)
chr6 (35-142)||(21094506-21094613)
chr6 (37-99)||(27719879-27719941)
chr6 (108-204)||(29479177-29479273)
chr6 (35-93)||(21095289-21095347)
chr6 (131-204)||(18574299-18574372)
chr6 (25-82)||(18574213-18574270)
chr6 (35-82)||(29477901-29477948)
chr6 (42-92)||(7629723-7629773)
chr6 (40-93)||(13561423-13561476)
[»] chr5 (18 HSPs)
chr5 (25-243)||(12372314-12372532)
chr5 (45-204)||(9083216-9083375)
chr5 (35-204)||(13278141-13278310)
chr5 (25-204)||(19228877-19229056)
chr5 (25-204)||(19229973-19230152)
chr5 (39-204)||(18655566-18655731)
chr5 (42-243)||(39350562-39350763)
chr5 (25-200)||(6803525-6803699)
chr5 (25-243)||(12373617-12373839)
chr5 (40-204)||(18654335-18654500)
chr5 (41-204)||(9082018-9082181)
chr5 (35-204)||(39164095-39164262)
chr5 (25-243)||(39349480-39349698)
chr5 (35-243)||(13276819-13277019)
chr5 (25-157)||(4032925-4033057)
chr5 (40-157)||(4031907-4032024)
chr5 (142-200)||(6802017-6802075)
chr5 (135-204)||(8447116-8447185)
[»] chr8 (23 HSPs)
chr8 (37-243)||(9244065-9244271)
chr8 (37-244)||(26364740-26364947)
chr8 (25-243)||(41636831-41637049)
chr8 (25-204)||(521997-522176)
chr8 (25-204)||(9245331-9245510)
chr8 (25-240)||(30640801-30641015)
chr8 (42-245)||(41638070-41638272)
chr8 (25-204)||(43584447-43584626)
chr8 (25-245)||(26366094-26366314)
chr8 (37-200)||(30644617-30644779)
chr8 (25-243)||(20308923-20309141)
chr8 (35-204)||(20309961-20310131)
chr8 (25-243)||(21095556-21095774)
chr8 (35-204)||(21096594-21096764)
chr8 (35-204)||(34642704-34642872)
chr8 (37-200)||(43585857-43586019)
chr8 (35-87)||(31203071-31203123)
chr8 (38-204)||(34643878-34644038)
chr8 (25-82)||(22012298-22012355)
chr8 (35-82)||(22013169-22013216)
chr8 (141-204)||(31203005-31203068)
chr8 (35-82)||(43133978-43134025)
chr8 (35-79)||(3714449-3714493)
[»] chr1 (26 HSPs)
chr1 (42-204)||(50484913-50485075)
chr1 (35-244)||(51468338-51468547)
chr1 (25-204)||(7111375-7111554)
chr1 (25-204)||(17244214-17244393)
chr1 (25-204)||(51693186-51693365)
chr1 (37-204)||(45229515-45229682)
chr1 (38-204)||(5488780-5488946)
chr1 (25-200)||(7110269-7110444)
chr1 (35-243)||(52086627-52086833)
chr1 (45-204)||(40187642-40187800)
chr1 (25-200)||(52759406-52759581)
chr1 (44-243)||(1823215-1823410)
chr1 (25-162)||(52761496-52761633)
chr1 (25-204)||(51468801-51468980)
chr1 (42-204)||(5488540-5488702)
chr1 (45-204)||(18819301-18819460)
chr1 (25-204)||(38235050-38235228)
chr1 (37-204)||(52087686-52087853)
chr1 (26-204)||(50483549-50483727)
chr1 (111-204)||(17245651-17245743)
chr1 (25-157)||(45228361-45228493)
chr1 (38-204)||(1821947-1822114)
chr1 (35-99)||(21203155-21203219)
chr1 (49-204)||(47532996-47533150)
chr1 (35-79)||(47533764-47533808)
chr1 (150-242)||(25181502-25181594)
[»] scaffold0141 (2 HSPs)
scaffold0141 (42-243)||(31033-31234)
scaffold0141 (42-204)||(35202-35364)
[»] scaffold0049 (2 HSPs)
scaffold0049 (42-243)||(83578-83779)
scaffold0049 (42-204)||(79448-79610)
[»] chr2 (12 HSPs)
chr2 (35-243)||(27892246-27892454)
chr2 (25-204)||(16602764-16602943)
chr2 (25-243)||(27891106-27891324)
chr2 (45-245)||(23832966-23833165)
chr2 (25-204)||(38243855-38244034)
chr2 (66-204)||(26388257-26388395)
chr2 (35-182)||(38242944-38243088)
chr2 (131-204)||(16604195-16604268)
chr2 (135-251)||(43814513-43814629)
chr2 (153-243)||(23833898-23833988)
chr2 (159-204)||(15496084-15496129)
chr2 (35-79)||(5033623-5033667)
[»] scaffold0878 (2 HSPs)
scaffold0878 (35-204)||(2936-3106)
scaffold0878 (25-165)||(1847-1986)
[»] scaffold1425 (2 HSPs)
scaffold1425 (25-243)||(1501-1719)
scaffold1425 (42-204)||(173-335)
[»] scaffold0018 (1 HSPs)
scaffold0018 (35-204)||(25254-25424)
[»] scaffold0349 (1 HSPs)
scaffold0349 (37-99)||(9301-9363)
[»] scaffold0026 (2 HSPs)
scaffold0026 (25-89)||(104405-104469)
scaffold0026 (137-204)||(104340-104407)


Alignment Details
Target: chr7 (Bit Score: 115; Significance: 2e-58; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 24 - 243
Target Start/End: Original strand, 18788459 - 18788678
Alignment:
Q  24 gagaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattat 123  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||       || |||||||||||||    
T  18788459 gagaagaagaaagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaacggtctatttttttagaggattaaaattat 18788558  T
Q  124 caaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaagg 223  Q
    |||| |||||||||||||||||||| |||||||| ||||||||||||||||||| |||||| ||||  ||||| |||||||        ||| |||| ||    
T  18788559 caaaattggaccaaattgaataaaagaaataagttaagggacatgtttgagaaagttaagatttataggaccatattgaataaaagaaataaattaaggg 18788658  T
Q  224 accagcatatcaattaagcc 243  Q
    ||| ||||||||||||||||    
T  18788659 accggcatatcaattaagcc 18788678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 37 - 243
Target Start/End: Complemental strand, 29186870 - 29186664
Alignment:
Q  37 taaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggacca 136  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||||| | |||||        | |||||||||||||||||| ||| ||||    
T  29186870 taaataaattaggtgttggtgatacactataaaatctgatagacctccgtaatcctacggtctcattttttaagggattaaaattatcaaaattgaacca 29186771  T
Q  137 aattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaaggaccagcatatcaa 236  Q
    ||||||||||||||||||||| ||||||| ||||||||||| |||| ||||||| |||||||||||||        |||||||| ||||||||| |||||    
T  29186770 aattgaataaaataaataagttaagggacgtgtttgagaaagttaaaacttatgggaccaaattgaataaaagaaataagttaagggaccagcagatcaa 29186671  T
Q  237 ttaagcc 243  Q
    |||||||    
T  29186670 ttaagcc 29186664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 25 - 243
Target Start/End: Original strand, 44420423 - 44420640
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||| ||| |        |||| ||||||||||||    
T  44420423 agaagaagaaagtaaataaattagatgttggtgatacactataaa-tctgatagaccttcgtaatccaacggtatctttttttagggcattaaaattatc 44420521  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaagga 224  Q
    ||| |||||| ||||||||||||| |||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||        ||||||||||||    
T  44420522 aaaattggactaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaaagga 44420621  T
Q  225 ccagcatatcaattaagcc 243  Q
     | ||||||||||||||||    
T  44420622 tcggcatatcaattaagcc 44420640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 25 - 204
Target Start/End: Complemental strand, 43113892 - 43113713
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| || |||||||||||||| |||||||||| |||||||||||||||||||  ||||||||| |||||        |||||||||||||||||    
T  43113892 agaagaagaaagcaaataaattaggtgctggtgatacactataaaatctgatagacctctgtaatccaacggtctctttttttaggggattaaaattatc 43113793  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||| |||||||||||||||||||| |||||||| ||||||| ||||||||||| |||| |||||||||||||||||||||    
T  43113792 aaaattggaccaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaaaacttatgagaccaaattgaat 43113713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 25 - 243
Target Start/End: Complemental strand, 19217845 - 19217627
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||| |||||        |||| ||||||||||||    
T  19217845 agaagaagaaagtaaataaattaggtgttggtgatacactataaaatccgatagacctccgtaatccaacggtctctttttttagggtattaaaattatc 19217746  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaagga 224  Q
    ||| ||| |||||||||||||||| |||||||| || |||| ||||||||||| |||||||||||| |||||||||||||        |||||||| |||    
T  19217745 aaaattgtaccaaattgaataaaagaaataagttaatggacgtgtttgagaaagttaagacttatgggaccaaattgaataaaagaaataagttaaggga 19217646  T
Q  225 ccagcatatcaattaagcc 243  Q
    || ||| ||||||||||||    
T  19217645 ccggcagatcaattaagcc 19217627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 25 - 243
Target Start/End: Original strand, 29187930 - 29188148
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| ||||||||||||||||||||||||| || |||||||||||||||||||  | ||||||| |||||        |||||||||||||||||    
T  29187930 agaagaagaaagtaaataaattaggtgttggtgatgcactataaaatctgatagacctctgcaatccaacggtctctttttttaggggattaaaattatc 29188029  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaagga 224  Q
    ||| |||||| |||||||||||||||||||| | ||||||| ||||||||||| |||||||||||| |||||||||||||        ||||||||||||    
T  29188030 aaaattggactaaattgaataaaataaataaattaagggacgtgtttgagaaagttaagacttatgggaccaaattgaataaaagaaataagttaaagga 29188129  T
Q  225 ccagcatatcaattaagcc 243  Q
    || ||| |||| |||||||    
T  29188130 ccggcagatcatttaagcc 29188148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 25 - 244
Target Start/End: Complemental strand, 9391737 - 9391518
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||| |||||        |  ||||||||||||||    
T  9391737 agaagaagaaagtaaataaatttggtgttgatgatacactataaaatctgatagaccttcgtaatccaacggtctctttttttaaaggattaaaattatc 9391638  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaagga 224  Q
    ||| ||| |||||||||||||||| |||||||| ||||||| |||||||||||||||||| ||||  |||||||||||||        |||||||| |||    
T  9391637 aaaattgtaccaaattgaataaaagaaataagtgaagggacgtgtttgagaaaattaagatttataggaccaaattgaataaaagaaataagttaaggga 9391538  T
Q  225 ccagcatatcaattaagcca 244  Q
    || ||| |||||||||||||    
T  9391537 ccggcagatcaattaagcca 9391518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 25 - 243
Target Start/End: Original strand, 43962469 - 43962687
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| || |||||||||||||||| |||||| | |||||||||||||||||||||||||||||| |||||        ||  |||||||||||||    
T  43962469 agaagaagaaaggaaataaattaggtgttagtgatatactataaaatctgatagaccttcgtaatccaacggtctgtttttttagatgattaaaattatc 43962568  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaagga 224  Q
    ||| ||||| |||||||||||||| |||||||| |||||||||||||||||||  ||||||||||| |||||||||||||        |||||||| |||    
T  43962569 aaaattggatcaaattgaataaaagaaataagttaagggacatgtttgagaaagctaagacttatgtgaccaaattgaataaaagaaataagttaaggga 43962668  T
Q  225 ccagcatatcaattaagcc 243  Q
    || ||| ||||||||||||    
T  43962669 ccggcagatcaattaagcc 43962687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 25 - 243
Target Start/End: Complemental strand, 44417675 - 44417457
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||   |||        |||||||||||||||||    
T  44417675 agaagaagaaagtaaataaattaggtgttggtgatagactataaaatctgatagacctccgtaatccaacaatctctttttttaggggattaaaattatc 44417576  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaagga 224  Q
    ||| ||||||||||||||| ||||||||||||| ||||||| ||||||||||  ||||||||||||  ||||||||||||        |||||||| |||    
T  44417575 aaaattggaccaaattgaagaaaataaataagttaagggacgtgtttgagaatgttaagacttatggaaccaaattgaataaaagaaataagttaaggga 44417476  T
Q  225 ccagcatatcaattaagcc 243  Q
    || ||| ||||||||||||    
T  44417475 ccggcagatcaattaagcc 44417457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 35 - 244
Target Start/End: Original strand, 13750546 - 13750755
Alignment:
Q  35 agtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggac 134  Q
    |||| ||||||||| || || ||||||| |||||||||| ||||||||||||||||||| |||||        |||||||||||||||||||| ||||||    
T  13750546 agtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacggtctgtttttttaggggattaaaattatcaaaattggac 13750645  T
Q  135 caaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaaggaccagcatatc 234  Q
    |||||||||||||| |||||||| ||||||| ||||||||||| |||||||||||| || ||||||||||        |||||||| ||||| ||| |||    
T  13750646 caaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgtgatcaaattgaataaaagaaataagttaagggaccggcagatc 13750745  T
Q  235 aattaagcca 244  Q
    ||||||||||    
T  13750746 aattaagcca 13750755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 25 - 189
Target Start/End: Original strand, 9392715 - 9392879
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||||||||  ||||||||| |||||||||||||||||||  ||||||||| |||||        |||||||||||||||||    
T  9392715 agaagaagaaagtaaataaattaggtgccggtgatacactataaaatctgatagacctctgtaatccaacggtctctttttctaggggattaaaattatc 9392814  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttat 189  Q
    ||| |||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||    
T  9392815 aaaattggaccaaattgaataaaagaaataagttaagggacatgtttgagaaagttaagacttat 9392879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 25 - 200
Target Start/End: Complemental strand, 18787366 - 18787191
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| ||||||||||||| ||||||||||||||  ||||||||||||| |||| |||||||||| ||||||       |||||||||||||||||    
T  18787366 agaagaagaaagtaaataaattaagtgttggtgatacaccataaaatctgataaacctccgtaatccaacggtctatttttttaggggattaaaattatc 18787267  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaatt 200  Q
    ||| |||||||||||||||||||| |||||||| ||||||||| ||||| ||| |||||| ||||| |||||||||    
T  18787266 aaaattggaccaaattgaataaaagaaataagttaagggacatatttgaaaaagttaagatttatgggaccaaatt 18787191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 25 - 199
Target Start/End: Original strand, 45399910 - 45400084
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||        |||||||||||||||||    
T  45399910 agaagaagaaagtaaataaattaggtgttagtgatacactataaaatctgatagaccttcgtaatccaacggtctctttttttaggggattaaaattatc 45400009  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaat 199  Q
    ||| |||||||||| | ||||||| |||||||| ||||||| ||||||  ||| |||||| ||||||||||||||    
T  45400010 aaaattggaccaaagtaaataaaagaaataagttaagggacgtgtttgcaaaagttaagagttatgagaccaaat 45400084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 35 - 204
Target Start/End: Complemental strand, 7011842 - 7011672
Alignment:
Q  35 agtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnn-aggggattaaaattatcaaagttgga 133  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||| |||||         |  ||||||||||||||||| |||||    
T  7011842 agtaaataaattaggtgttggtgatacactataaaatcttatagacctccgtaatccaacggtcttttttttttaatggattaaaattatcaaaattgga 7011743  T
Q  134 ccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||||||||||||||| |||||||  ||||||||||||||| ||| ||||||||||||||| ||||||||||    
T  7011742 ccaaattgaataaaagaaataagctaagggacatgtttgataaagttaagacttatgagatcaaattgaat 7011672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 35 - 204
Target Start/End: Complemental strand, 7027200 - 7027030
Alignment:
Q  35 agtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnn-aggggattaaaattatcaaagttgga 133  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||| |||||         |  ||||||||||||||||| |||||    
T  7027200 agtaaataaattaggtgttggtgatacactataaaatcttatagacctccgtaatccaacggtcttttttttttaatggattaaaattatcaaaattgga 7027101  T
Q  134 ccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||||||||||||||| |||||||  ||||||||||||||| ||| ||||||||||||||| ||||||||||    
T  7027100 ccaaattgaataaaagaaataagctaagggacatgtttgataaagttaagacttatgagatcaaattgaat 7027030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 25 - 243
Target Start/End: Original strand, 48793416 - 48793634
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||| ||||||||||||||| |||||||||| ||| ||||| ||||||||| |||||        ||| |||||||||||||    
T  48793416 agaagaagaaagtaaataaatttggtgttggtgatacactataaaatcttatacacctttgtaatccaacggtctctttttttaggagattaaaattatc 48793515  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaagga 224  Q
    ||| ||||| |||||||||||||| |||||||| ||||||| ||||||| ||| |||||||||||| ||||||| |||||        |||||||| |||    
T  48793516 aaaattggatcaaattgaataaaagaaataagttaagggacgtgtttgaaaaagttaagacttatgggaccaaaatgaataaaagaaataagttaaggga 48793615  T
Q  225 ccagcatatcaattaagcc 243  Q
    || ||| ||||||||||||    
T  48793616 ccggcaaatcaattaagcc 48793634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 35 - 204
Target Start/End: Original strand, 27072564 - 27072733
Alignment:
Q  35 agtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggac 134  Q
    |||||||||||||||||||||||||| | |||||||||| ||||||||  ||||||||| ||| |        || ||||||||||||||||| || |||    
T  27072564 agtaaataaattaggtgttggtgataaactataaaatcttatagacctctgtaatccaacggtttttttttttagtggattaaaattatcaaaatttgac 27072663  T
Q  135 caaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    |||||||||||||| |||||||| ||||||||||||||||||| |||||||||||| || ||||||||||    
T  27072664 caaattgaataaaagaaataagttaagggacatgtttgagaaagttaagacttatgggatcaaattgaat 27072733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 35 - 204
Target Start/End: Complemental strand, 27205749 - 27205580
Alignment:
Q  35 agtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggac 134  Q
    |||||||||||||||||||||||||| | |||||||||| ||||||||  ||||||||| ||| |        || ||||||||||||||||| || |||    
T  27205749 agtaaataaattaggtgttggtgatagactataaaatcttatagacctctgtaatccaacggtttttttttttagtggattaaaattatcaaaatttgac 27205650  T
Q  135 caaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    |||||||||||||| |||||||| ||||||||||||||||||| |||||||||||| || ||||||||||    
T  27205649 caaattgaataaaagaaataagttaagggacatgtttgagaaagttaagacttatgggatcaaattgaat 27205580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 38 - 204
Target Start/End: Complemental strand, 44746931 - 44746765
Alignment:
Q  38 aaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggaccaa 137  Q
    ||||||||||||||||| | ||||| |||||||| |||||||||| |||||||||| |||||        | |||||||||||||||||| || ||||||    
T  44746931 aaataaattaggtgttgataatacactataaaatatgatagacctccgtaatccaacggtctctttttctaagggattaaaattatcaaaatttgaccaa 44746832  T
Q  138 attgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||||||||||| |||||||| || | |||||||||||||||||||||||||| ||| ||||||||||    
T  44746831 attgaataaaagaaataagttaacgaacatgtttgagaaaattaagacttataagatcaaattgaat 44746765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 35 - 243
Target Start/End: Complemental strand, 48792651 - 48792443
Alignment:
Q  35 agtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggac 134  Q
    |||||||||||| ||||||||||||||| |||||||||| ||| ||| | ||||||||| |||||        ||| |||||||||||||||| || ||     
T  48792651 agtaaataaatttggtgttggtgatacactataaaatcttatacacccttgtaatccaacggtctctttttttaggagattaaaattatcaaaattagat 48792552  T
Q  135 caaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaaggaccagcatatc 234  Q
    |||||||||||||| |||||||| ||||||||||||||| ||| |||| ||||||| |||||||||||||        |||||||| ||||| ||| |||    
T  48792551 caaattgaataaaagaaataagttaagggacatgtttgaaaaagttaaaacttatgggaccaaattgaataaaagaaataagttaagggaccggcagatc 48792452  T
Q  235 aattaagcc 243  Q
    |||||||||    
T  48792451 aattaagcc 48792443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 25 - 203
Target Start/End: Complemental strand, 12630782 - 12630603
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| ||||||||||||||||||| ||||| ||| ||||||||||||| ||||  |||||||||  ||||        |||||||||||||||||    
T  12630782 agaagaagaaagtaaataaattaggtgttagtgatccataataaaatctgatatacctctgtaatccaacagtctctttttctaggggattaaaattatc 12630683  T
Q  125 aaagttggaccaaattgaataaaataaataag-taaagggacatgtttgagaaaattaagacttatgagaccaaattgaa 203  Q
    ||| || ||||||||||||||||| ||| ||| | ||||||| ||||||||||||||||||||| |||||||||||||||    
T  12630682 aaaattagaccaaattgaataaaaaaaaaaaggttaagggacgtgtttgagaaaattaagacttttgagaccaaattgaa 12630603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 25 - 165
Target Start/End: Original strand, 44748463 - 44748603
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||        |||||||||||||||||    
T  44748463 agaagaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagaccttcgtaatccaacagtctccttttctaggggattaaaattatc 44748562  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggac 165  Q
    ||| |||||||| ||||||||||| |||||| | |||||||    
T  44748563 aaaattggaccatattgaataaaagaaataaattaagggac 44748603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 25 - 176
Target Start/End: Complemental strand, 43961151 - 43961000
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| ||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||| |||||        || ||||||||||||||    
T  43961151 agaagaagaaagtaaataaattaggtgttagtgatacactataaaatctgatagacctttgtaatccaacggtctgtttttgtagaggattaaaattatc 43961052  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaa 176  Q
    ||| ||||| |||||||||||||| |||||| | ||||||| ||||||||||    
T  43961051 aaaattggatcaaattgaataaaagaaataaattaagggacgtgtttgagaa 43961000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 35 - 249
Target Start/End: Original strand, 37237138 - 37237349
Alignment:
Q  35 agtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggac 134  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||| | |||        || ||||| ||||||||||| ||||||    
T  37237138 agtaaataaattaggtgttggtcatacactataaaatctgatagacctccgtaatccaacgatctctttttttagaggatt-aaattatcaaaattggac 37237236  T
Q  135 caaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaaggaccagcatatc 234  Q
    |||||| ||||||  |||||||| ||||||  ||||||||| | |||||||||||||||||||||| |||        ||| |||| ||||  ||| |||    
T  37237237 caaatttaataaa--aaataagttaagggatgtgtttgagagagttaagacttatgagaccaaattaaataaaagaaataaattaagggacgggcagatc 37237334  T
Q  235 aattaagccattaat 249  Q
    |||||||||||||||    
T  37237335 aattaagccattaat 37237349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 42 - 204
Target Start/End: Complemental strand, 3537627 - 3537465
Alignment:
Q  42 aaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggaccaaattg 141  Q
    |||||||||| |||||||| | |||||||| | ||||||||||||||||||| ||| |        |||||||||||||||| ||| || ||| ||||||    
T  3537627 aaattaggtgatggtgatatactataaaattttatagaccttcgtaatccaacggtttctttttttaggggattaaaattattaaaattagactaaattg 3537528  T
Q  142 aataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||||||| |||||||| ||||||| ||||||||||| |||| ||||||| |||||||||||||    
T  3537527 aataaaagaaataagttaagggacgtgtttgagaaagttaaaacttatgggaccaaattgaat 3537465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 35 - 204
Target Start/End: Original strand, 32519659 - 32519828
Alignment:
Q  35 agtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggac 134  Q
    |||||| ||||||||||||||||| ||| |||| |||||| |||||||||||||| ||| |||||        | |||||||||||||| ||| ||| ||    
T  32519659 agtaaaaaaattaggtgttggtgacacactatacaatctggtagaccttcgtaattcaacggtctctttttttaagggattaaaattattaaaattgaac 32519758  T
Q  135 caaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    |||||||||||||| |||||| | ||||||  ||||||||||| |||||| ||||| |||||||||||||    
T  32519759 caaattgaataaaagaaataatttaagggatgtgtttgagaaagttaagatttatgggaccaaattgaat 32519828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 25 - 204
Target Start/End: Complemental strand, 13597361 - 13597183
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||||||||||||||||||| |||||||||| |||||||| | |||||||| | | |        || ||||||||||||||    
T  13597361 agaagaagaaagtaaataaattaggtgttggtgatacactataaaatcttatagacctccctaatccaacgatatctttttttagaggattaaaattatc 13597262  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||| ||| | |||||| ||||||| ||||||||  |||||| ||||||||||| |||||||||||  |||||||||||||    
T  13597261 aaaattg-atcaaatttaataaaagaaataagttcagggacgtgtttgagaaagttaagacttataggaccaaattgaat 13597183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 39 - 204
Target Start/End: Complemental strand, 32518616 - 32518460
Alignment:
Q  39 aataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggaccaaa 138  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||        ||||||||||||         ||| ||||||    
T  32518616 aataaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctttttttttaggggattaaaa---------ttgaaccaaa 32518526  T
Q  139 ttgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    |||||||||| |||||| | ||||||| ||||||||||| |||||| ||||| |||||||||||||    
T  32518525 ttgaataaaagaaataatttaagggacgtgtttgagaaagttaagatttatgggaccaaattgaat 32518460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 45 - 204
Target Start/End: Complemental strand, 44230625 - 44230466
Alignment:
Q  45 ttaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggaccaaattgaat 144  Q
    |||||||||| ||||||| | |||||||||||||||||  ||||||||| |||||        |||||||| ||||||| ||| ||||||||||||||||    
T  44230625 ttaggtgttgatgatacactgtaaaatctgatagacctctgtaatccaacggtctcttttcgtaggggattgaaattattaaaattggaccaaattgaat 44230526  T
Q  145 aaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    |||| |||||||| || |||| || |||||||| |||| |||||||  || |||||||||    
T  44230525 aaaagaaataagttaaaggacgtgattgagaaagttaaaacttatggaactaaattgaat 44230466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 35 - 165
Target Start/End: Complemental strand, 26005559 - 26005429
Alignment:
Q  35 agtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggac 134  Q
    |||| |||||||| |||||||||||||| |||||||||| ||||||||| ||||||||| |||||        || ||| ||||||||||||| ||| ||    
T  26005559 agtacataaattacgtgttggtgatacactataaaatcttatagacctttgtaatccaacggtctctttttttagtggagtaaaattatcaaaattgaac 26005460  T
Q  135 caaattgaataaaataaataagtaaagggac 165  Q
    |||||||||||||| |||||||| |||||||    
T  26005459 caaattgaataaaagaaataagttaagggac 26005429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 132 - 239
Target Start/End: Complemental strand, 12630614 - 12630507
Alignment:
Q  132 gaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaaggaccagcat 231  Q
    |||||||||||| |||| | |||||| |||| |||||||||||||| ||||||||||||||||||||||||||        ||||||||||||||  |||    
T  12630614 gaccaaattgaagaaaagacataagttaaggaacatgtttgagaaagttaagacttatgagaccaaattgaataaaagacataagttaaaggaccgacat 12630515  T
Q  232 atcaatta 239  Q
    ||||||||    
T  12630514 atcaatta 12630507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 204
Target Start/End: Original strand, 3538483 - 3538642
Alignment:
Q  35 agtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggac 134  Q
    |||||||||||||| |||||||||||||   |||||| ||||||| || |||||||||| |||||        |||||| |||||||||||||           
T  3538483 agtaaataaattagatgttggtgatacaccgtaaaatttgatagatctccgtaatccaacggtctctttttttaggggactaaaattatcaaa------- 3538575  T
Q  135 caaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
       ||||||||||| |||||||| ||  ||| ||||||||||| ||||||||||||||||||||||||||    
T  3538576 ---attgaataaaagaaataagtgaaaagacgtgtttgagaaagttaagacttatgagaccaaattgaat 3538642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 162
Target Start/End: Original strand, 43114987 - 43115124
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| ||||||||||||||||  || |||| || ||||||||||||||||| |  ||||||||| |||||        | |||||||||||||||    
T  43114987 agaagaagaaagtaaataaattaggttatgatgatgcactataaaatctgatagacttcagtaatccaacggtcttcttttttaagggattaaaattatc 43115086  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagg 162  Q
    ||| ||||| |||||||||||||| |||||||| ||||    
T  43115087 aaaattggatcaaattgaataaaagaaataagttaagg 43115124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 26 - 93
Target Start/End: Original strand, 13599158 - 13599225
Alignment:
Q  26 gaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaa 93  Q
    |||| ||| |||||||||||||||||||  ||||||| ||||||||||||||||||| ||||||||||    
T  13599158 gaagaagaaagtaaataaattaggtgttactgatacactataaaatctgatagacctccgtaatccaa 13599225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 37235992 - 37235939
Alignment:
Q  35 agtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaa 88  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||| |||||    
T  37235992 agtaaataaattaggtgttggtgatacattgtaaaatctgattgacctccgtaa 37235939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 35 - 83
Target Start/End: Original strand, 44231771 - 44231819
Alignment:
Q  35 agtaaataaattaggtgttggtgatacattataaaatctgatagacctt 83  Q
    ||||||||||| |||||||||||||||| ||||||||||| ||||||||    
T  44231771 agtaaataaatcaggtgttggtgatacactataaaatctggtagacctt 44231819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 177
Target Start/End: Complemental strand, 37235941 - 37235879
Alignment:
Q  115 taaaattatcaaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaa 177  Q
    ||||||| ||||| |||||||||||||||| ||| |||||||| |||||||  ||||||||||    
T  37235941 taaaattctcaaaattggaccaaattgaatcaaagaaataagttaagggacgcgtttgagaaa 37235879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 157
Target Start/End: Original strand, 13599246 - 13599290
Alignment:
Q  113 attaaaattatcaaagttggaccaaattgaataaaataaataagt 157  Q
    ||||||||||||||| ||||| |||||||||||||| ||||||||    
T  13599246 attaaaattatcaaaattggagcaaattgaataaaagaaataagt 13599290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 74
Target Start/End: Original strand, 9357706 - 9357745
Alignment:
Q  35 agtaaataaattaggtgttggtgatacattataaaatctg 74  Q
    |||||||||||||||||||||||||||| ||||| |||||    
T  9357706 agtaaataaattaggtgttggtgatacactataagatctg 9357745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 245
Target Start/End: Complemental strand, 45688960 - 45688865
Alignment:
Q  150 aaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaaggaccagcatatcaattaagccat 245  Q
    |||| ||| ||||||  ||||||||||| |||||||||||| |||||||||||||        |||||||| |||||  || ||||||||||||||    
T  45688960 aaatgagttaagggatgtgtttgagaaagttaagacttatgtgaccaaattgaataaaagaaataagttaagggaccgacagatcaattaagccat 45688865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 95
Target Start/End: Complemental strand, 45398731 - 45398671
Alignment:
Q  35 agtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatg 95  Q
    |||||||||||||| ||||||||||||| ||||| || ||||| |||| | | ||||||||    
T  45398731 agtaaataaattagatgttggtgatacactataagatttgataaacctcccttatccaatg 45398671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 115; Significance: 2e-58; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 25 - 204
Target Start/End: Original strand, 7261443 - 7261622
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||       |||||||||||||||||    
T  7261443 agaagaagaaagtaaataaattaggtgttggtgatacactataaaatcttatagaccttcgtaatccaatggtctatttttttaggggattaaaattatc 7261542  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||| |||||||||||||||||||| |||||||| ||||||| ||||||||||| |||||||||||| || ||||||||||    
T  7261543 aaaattggaccaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaat 7261622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 25 - 204
Target Start/End: Original strand, 22623043 - 22623222
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||        |||||||||||||||||    
T  22623043 agaagaagagagtaaataaattagatgttggtgatacattataaaatctgatagacctccgtaatccaacggtctctttttgtaggggattaaaattatc 22623142  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||| |||||||||||||||||||| |||||||||||||||| || |||||||| |||||||||||| |||||||||||||    
T  22623143 aaaattggaccaaattgaataaaagaaataagtaaagggacgtgcttgagaaagttaagacttatgggaccaaattgaat 22623222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 25 - 204
Target Start/End: Complemental strand, 22622085 - 22621906
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||| ||||| ||||||||| ||||||||||||||||||| |||||||||| |||||        |||||||||||||||||    
T  22622085 agaagaagaaagtaaataaattcggtgtcggtgatacactataaaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattatc 22621986  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||| |||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  22621985 aaaattggaccaaattgaataaaagaaataagtaaagggacgtgtttgagaaagttaagacttatgagaccaaattgaat 22621906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 25 - 204
Target Start/End: Original strand, 34095559 - 34095738
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||||||||| ||||||||| ||||||||||||||||||| |||||| ||| |||||        |||||||||||||||||    
T  34095559 agaagaagaaagtaaataaattaggtgtgggtgatacactataaaatctgatagacctccgtaattcaacggtctccttttttaggggattaaaattatc 34095658  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||| ||||||||||||||| |||| |||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||    
T  34095659 aaaattggaccaaattgaacaaaagaaataagttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaat 34095738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 25 - 204
Target Start/End: Original strand, 38032320 - 38032499
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||| |||||        |||||||||||||||||    
T  38032320 agaagaagaaagtaaataaattaggtgttgatgatacactataaaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattatc 38032419  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||| |||||||||||||||||||| |||| ||| ||||||| ||||||||||| |||||||||||  |||||||||||||    
T  38032420 aaaattggaccaaattgaataaaagaaatcagttaagggacgtgtttgagaaagttaagacttatatgaccaaattgaat 38032499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 25 - 243
Target Start/End: Original strand, 8815257 - 8815475
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||| ||| |        || ||||||||||||||    
T  8815257 agaagaagaaagtaaataaatttggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtttttttttttagaggattaaaattatc 8815356  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaagga 224  Q
    ||| ||||||||| ||||||| || |||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||        |||||||| |||    
T  8815357 aaaattggaccaatttgaatagaagaaataagttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaacgga 8815456  T
Q  225 ccagcatatcaattaagcc 243  Q
    || ||| ||||||||||||    
T  8815457 ccggcaaatcaattaagcc 8815475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 26 - 245
Target Start/End: Complemental strand, 10803106 - 10802887
Alignment:
Q  26 gaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatca 125  Q
    |||| ||| |||||||||||| ||||||||||||||| |||||||||||||| |||| |||||||||| |||||        |||| |||||||||||||    
T  10803106 gaagaagaaagtaaataaattcggtgttggtgatacaatataaaatctgataaacctccgtaatccaacggtctctttttttagggtattaaaattatca 10803007  T
Q  126 aagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaaggac 225  Q
    || |||||||||||||||||||| |||||||| ||||||| ||||||||||| |||| | ||||| |||||||||||||        |||||||| |||     
T  10803006 aaattggaccaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaaaatttatgggaccaaattgaataaaagaaataagttaagggat 10802907  T
Q  226 cagcatatcaattaagccat 245  Q
    | ||| ||||||||||||||    
T  10802906 cggcagatcaattaagccat 10802887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 25 - 204
Target Start/End: Complemental strand, 38031386 - 38031207
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||||||||||| ||||||| ||||||||||||||||||| |||||| ||| |||||        | |||||||||||||||    
T  38031386 agaagaagaaagtaaataaattaggtgttgatgatacactataaaatctgatagacctccgtaattcaacggtctttttttttatgggattaaaattatc 38031287  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||| |||||||||||||||||||| |||| ||| ||||||| ||||||||||| |||||||||||  |||||||||||||    
T  38031286 aaaattggaccaaattgaataaaagaaatcagttaagggacgtgtttgagaaagttaagacttataggaccaaattgaat 38031207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 37 - 204
Target Start/End: Original strand, 5433319 - 5433486
Alignment:
Q  37 taaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggacca 136  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |||||| |||  ||||        |||| ||||||||||||||| |||||  |    
T  5433319 taaataaattaggtgtttgtgatacattataaaatctgatagacctccgtaatacaacagtctcaatttttagggtattaaaattatcaaaattggagta 5433418  T
Q  137 aattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||||||||||||||||||||| |||| |||||||||||||| |||| ||||||  |||||||||||||    
T  5433419 aattgaataaaataaataagttaaggcacatgtttgagaaagttaaaacttataggaccaaattgaat 5433486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 25 - 184
Target Start/End: Complemental strand, 17356579 - 17356420
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| ||||||| || ||||||||||||||||| ||||||||||||||||||| |||||||||| |||||        |||||||||||||||||    
T  17356579 agaagaagaaagtaaatgaactaggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattatc 17356480  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaaga 184  Q
    ||| ||||| |||||||||||||| |||||||| ||||||| ||||||||||| ||||||    
T  17356479 aaaattggaacaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaaga 17356420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 37 - 204
Target Start/End: Complemental strand, 8814340 - 8814174
Alignment:
Q  37 taaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggacca 136  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||  |||||       |||| ||||||||||||||| || |||||    
T  8814340 taaataaattaggtgttggtgttacactataaaatctgatagacctccgtaatccaacagtctatttttt-agggtattaaaattatcaaaattcgacca 8814242  T
Q  137 aattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    |||||||||||| |||||||| |||||||||||||||||||  ||||| ||||| ||| |||||||||    
T  8814241 aattgaataaaagaaataagttaagggacatgtttgagaaagataagatttatgggactaaattgaat 8814174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 42 - 204
Target Start/End: Complemental strand, 48499565 - 48499403
Alignment:
Q  42 aaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggaccaaattg 141  Q
    ||||||| |||||||||||||   |||||||||||||||||  ||||||||| | |||        |||||||||||||||||||| |||||||||||||    
T  48499565 aaattagatgttggtgatacaccgtaaaatctgatagacctctgtaatccaacgatctctttttttaggggattaaaattatcaaaattggaccaaattg 48499466  T
Q  142 aataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    |||||||||||||||| ||||||||||||||| ||| |||||| ||||| |||||||||||||    
T  48499465 aataaaataaataagttaagggacatgtttgaaaaagttaagaattatgggaccaaattgaat 48499403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 35 - 204
Target Start/End: Original strand, 56234931 - 56235099
Alignment:
Q  35 agtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggac 134  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||        || ||||||||| ||||||| || |||    
T  56234931 agtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaattcattggtct-gttttttagaggattaaaagtatcaaaattagac 56235029  T
Q  135 caaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    | |||||||||||| |||||||| |||||   ||||||| ||| ||||||||||||||| ||||||||||    
T  56235030 cgaattgaataaaagaaataagttaaggggtgtgtttgataaagttaagacttatgagatcaaattgaat 56235099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 25 - 200
Target Start/End: Complemental strand, 18091798 - 18091623
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||  ||||| ||| |||||        | | |||||||||||||    
T  18091798 agaagaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagacctctgtaattcaacggtctcattttttaagagattaaaattatc 18091699  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaatt 200  Q
    ||| |||||| ||||||||||||||| |||||| || |||| | ||||||||| ||||||||||||| ||||||||    
T  18091698 aaaattggactaaattgaataaaatagataagttaatggacgtttttgagaaagttaagacttatgaaaccaaatt 18091623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 25 - 204
Target Start/End: Original strand, 23757870 - 23758050
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| ||||||||||||||||||||||||||||  |||||||||||||||||| |||||| ||| |||||         | ||||||||||||||    
T  23757870 agaagaagaaagtaaataaattaggtgttggtgatacaccataaaatctgatagacctccgtaattcaacggtctctttttttggaggattaaaattatc 23757969  T
Q  125 aaagttggaccaaa-ttgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||| ||||| |||| || ||||||| |||||||| ||||||| ||||||||||| |||| ||||||||||| |||||||||    
T  23757970 aaaattggatcaaaatttaataaaagaaataagttaagggacgtgtttgagaaagttaaaacttatgagactaaattgaat 23758050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 56233859 - 56233763
Alignment:
Q  108 aggggattaaaattatcaaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||| || ||||||||| |||||||||||||    
T  56233859 aggggattaaaattatcaaaattggaccaaattgaataaaagaaataagttaagggacatgtttgagaaagttgagacttatgcgaccaaattgaat 56233763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 35 - 243
Target Start/End: Original strand, 10804105 - 10804313
Alignment:
Q  35 agtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggac 134  Q
    ||||||||||||||| |||| ||||||| | ||||||||||||||||| |||||||||| |||||        || ||||||||||||||||| ||| ||    
T  10804105 agtaaataaattaggcgttgatgatacactgtaaaatctgatagacctccgtaatccaacggtctttttttttagtggattaaaattatcaaaattgaac 10804204  T
Q  135 caaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaaggaccagcatatc 234  Q
    |||||||||||||| |||||||| |||| || | ||| ||||| |||| ||||||  |||||||||||||        |||||||| ||||| ||| |||    
T  10804205 caaattgaataaaagaaataagttaaggaacttatttaagaaagttaaaacttataggaccaaattgaataaaagaaataagttaagggaccggcagatc 10804304  T
Q  235 aattaagcc 243  Q
    |||||||||    
T  10804305 aattaagcc 10804313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 40 - 204
Target Start/End: Original strand, 17357778 - 17357942
Alignment:
Q  40 ataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggaccaaat 139  Q
    |||||||| || ||| ||||||||||||||||||| ||||||| |||||| ||| |||||        ||| |||||||||||||||| ||||| || ||    
T  17357778 ataaattaagtattgctgatacattataaaatctggtagacctccgtaattcaacggtctcttttttcaggagattaaaattatcaaaattggatcatat 17357877  T
Q  140 tgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||||||||| |||||||| ||||||| ||||||||||| ||||||||||||  ||||||||||||    
T  17357878 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatggaaccaaattgaat 17357942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 25 - 204
Target Start/End: Original strand, 48501224 - 48501402
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||||||||||| |||||||  ||||||||||| |||||| ||||||| || |||||        ||||||||||||| ||     
T  48501224 agaagaagaaagtaaataaattaggtgttgatgatacacaataaaatctgacagacctccgtaatctaacggtctctttttttaggggattaaaat-att 48501322  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||| || ||||||||||||||||| |||||||| || |||||||||||||||| |||||| |||||| ||| ||||||||    
T  48501323 aaaattagaccaaattgaataaaagaaataagttaaaggacatgtttgagaaagttaagaattatgaaacctaattgaat 48501402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 69 - 204
Target Start/End: Original strand, 35193140 - 35193275
Alignment:
Q  69 aatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggaccaaattgaataaaataaataagtaaagggacatg 168  Q
    |||||||||||||| |||||||||| |||||        ||||||||||||||||||||  ||||||||||||||||||| |||||||| || |||| ||    
T  35193140 aatctgatagacctccgtaatccaacggtctctttttctaggggattaaaattatcaaaaatggaccaaattgaataaaagaaataagttaaaggacgtg 35193239  T
Q  169 tttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||||||||| |||||  |||||||||||||||||||    
T  35193240 tttgagaaagttaagttttatgagaccaaattgaat 35193275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 204
Target Start/End: Complemental strand, 35192019 - 35191856
Alignment:
Q  38 aaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggaccaa 137  Q
    |||||||||||||| ||||   ||| |||||||| |||||||| | |||||||||| | |||        |||||||||||||||||||| ||| || ||    
T  35192019 aaataaattaggtggtggt---acactataaaatttgatagacttccgtaatccaacgttctctttttttaggggattaaaattatcaaaattgaactaa 35191923  T
Q  138 attgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||||||||||| |||||||| || | || ||||||||||| ||||||||||||| ||||||||||||    
T  35191922 attgaataaaagaaataagttaatgaacgtgtttgagaaagttaagacttatgaaaccaaattgaat 35191856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 25 - 142
Target Start/End: Original strand, 35927016 - 35927133
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| | |||        ||| |||||||||||||    
T  35927016 agaagaagaaagtaaataaattaggtgttggtgatacactataaaatctggtagaccttcgtaatccaacgatctttttttttaggagattaaaattatc 35927115  T
Q  125 aaagttggaccaaattga 142  Q
    ||| ||||| ||||||||    
T  35927116 aaaattggatcaaattga 35927133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 93
Target Start/End: Original strand, 36074706 - 36074762
Alignment:
Q  37 taaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaa 93  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  36074706 taaataaattaggtgttggtgatacactataaaatatgatagaccttcgtaatccaa 36074762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 48081467 - 48081535
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaa 93  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||| ||||| |||||| || |||||||    
T  48081467 agaagaagaaagtaaataaattaggtgttggtgatacattataaactctgaaagacctccgcaatccaa 48081535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 132 - 204
Target Start/End: Original strand, 48081597 - 48081669
Alignment:
Q  132 gaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||||||||||||||||| |||||||| ||||||||| ||||| ||| ||||||||||||  ||||||||||||    
T  48081597 gaccaaattgaataaaagaaataagttaagggacatatttgaaaaagttaagacttatggaaccaaattgaat 48081669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 35925909 - 35925841
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaa 93  Q
    ||||| ||| ||||||||||||||||||||  |||||| |||||||||||||||| || ||||||||||    
T  35925909 agaagaagaaagtaaataaattaggtgttgacgatacactataaaatctgatagatctccgtaatccaa 35925841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 200
Target Start/End: Complemental strand, 48080376 - 48080313
Alignment:
Q  137 aattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaatt 200  Q
    |||||||||||| |||||||| || ||||| |||||||||| ||||||||||||| ||||||||    
T  48080376 aattgaataaaagaaataagttaaaggacaagtttgagaaagttaagacttatgaaaccaaatt 48080313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 150 - 204
Target Start/End: Original strand, 48081555 - 48081609
Alignment:
Q  150 aaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    |||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||    
T  48081555 aaataacttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaat 48081609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 243
Target Start/End: Original strand, 48463026 - 48463102
Alignment:
Q  167 tgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaaggaccagcatatcaattaagcc 243  Q
    ||||||||||| |||| |||||||||||||||||||||        |||||||| ||||||||| ||||||||||||    
T  48463026 tgtttgagaaagttaaaacttatgagaccaaattgaataaaagaaataagttaagggaccagcagatcaattaagcc 48463102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 204
Target Start/End: Complemental strand, 34121375 - 34121338
Alignment:
Q  167 tgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  34121375 tgtttgagaaagttaagacttatgagaccaaattgaat 34121338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 48081290 - 48081334
Alignment:
Q  35 agtaaataaattaggtgttggtgatacattataaaatctgataga 79  Q
    |||||||||||||||||||||||||||| |||||| ||| |||||    
T  48081290 agtaaataaattaggtgttggtgatacagtataaactctcataga 48081334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 56233925 - 56233878
Alignment:
Q  26 gaagcagagagtaaataaattaggtgttggtgatacattataaaatct 73  Q
    |||| ||| ||||||||||||||||||||| |||||| ||||||||||    
T  56233925 gaagaagaaagtaaataaattaggtgttggcgatacactataaaatct 56233878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 34122731 - 34122775
Alignment:
Q  35 agtaaataaattaggtgttggtgatacattataaaatctgataga 79  Q
    ||||||||||| | |||||||||||||| ||||| ||||||||||    
T  34122731 agtaaataaatcaagtgttggtgatacactataagatctgataga 34122775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 110; Significance: 2e-55; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 25 - 243
Target Start/End: Complemental strand, 31937253 - 31937035
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||        |||||||||||||||||    
T  31937253 agaagaagaaagtaaaaaaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattatc 31937154  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaagga 224  Q
    ||| |||||||||| |||||||||||||||||| ||||||| ||||||||||| |||||||||||| |||||||||||||        |||||||| |||    
T  31937153 aaaattggaccaaaatgaataaaataaataagtgaagggacgtgtttgagaaagttaagacttatgggaccaaattgaataaaagaaataagttaaggga 31937054  T
Q  225 ccagcatatcaattaagcc 243  Q
    || ||| ||||||||||||    
T  31937053 ccggcagatcaattaagcc 31937035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 42 - 244
Target Start/End: Original strand, 31938224 - 31938426
Alignment:
Q  42 aaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggaccaaattg 141  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||        |||||||||||||||| ||| |||||| ||||||    
T  31938224 aaattaggtgttggtgatacactataaaatcttatagaccttcgtaatccaacggtctctttttttaggggattaaaattattaaaattggactaaattg 31938323  T
Q  142 aataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaaggaccagcatatcaattaag 241  Q
    ||||||| |||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||        |||||||| ||||| ||| ||||||||||    
T  31938324 aataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggaccggcagatcaattaag 31938423  T
Q  242 cca 244  Q
    |||    
T  31938424 cca 31938426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 36 - 204
Target Start/End: Complemental strand, 21728117 - 21727949
Alignment:
Q  36 gtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggacc 135  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||  |||||       ||| |||||||||||||||| ||| | |    
T  21728117 gtaaataaattaggtgttggtgatacattataaaatgagatagaccttcgtaatctaacagtctacttttttaggagattaaaattatcaaaattgaatc 21728018  T
Q  136 aaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  21728017 aaattgaataaaagaaataagttaagggacatgtttgagaaagttaagacttatgagaccaaattgaat 21727949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 25 - 204
Target Start/End: Complemental strand, 28776666 - 28776487
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||        |||||||||||||||||    
T  28776666 agaagaagaaagtaaataaattaggtgttgatgatacattataaaatctgatagacctccgtaatccaacggtctctgtttttaggggattaaaattatc 28776567  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||| |||||||||||||||||||| |||| ||| ||||||| |||||||||||||||||| ||||  || ||||||||||    
T  28776566 aaaattggaccaaattgaataaaagaaatcagttaagggacttgtttgagaaaattaagatttataggatcaaattgaat 28776487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 25 - 204
Target Start/End: Original strand, 28777587 - 28777766
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||| |||||        |||||||||||||||||    
T  28777587 agaagaagaaagtaaataaattaggtgttgatgatacactataaaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattatc 28777686  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||| |||||||||||||||||||| |||| ||| ||||||| ||||||||||| |||||||||||  |||||||||||||    
T  28777687 aaaattggaccaaattgaataaaagaaatcagttaagggacgtgtttgagaaagttaagacttataggaccaaattgaat 28777766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 25 - 240
Target Start/End: Complemental strand, 52522144 - 52521930
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||  ||||        ||||||||||| |||||    
T  52522144 agaagaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaactgtct-tttttttaggggattaaagttatc 52522046  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaagga 224  Q
    ||| ||||||||||||||||||||||||||||| || |||| ||||||||||| ||||||  ||||||||||||||||||        |||||||| |||    
T  52522045 aaaattggaccaaattgaataaaataaataagtgaaaggacgtgtttgagaaagttaagatctatgagaccaaattgaattaaagaaataagttaaggga 52521946  T
Q  225 ccagcatatcaattaa 240  Q
    |||||| |||||||||    
T  52521945 ccagcagatcaattaa 52521930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 25 - 241
Target Start/End: Original strand, 43393953 - 43394170
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||| |||||        ||||| |||||||||||    
T  43393953 agaagaagaaagtaaataaattaggtgttggtgatacactgtaaaatctgatagacctccgtaatccaacggtctctttttttagggggttaaaattatc 43394052  T
Q  125 aaagttggaccaaattgaataaaataaa-taagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaagg 223  Q
    ||| ||||||||| |||||||||| ||| ||||| ||||||| | ||||||||| ||||||||||||||||||||||||||        |||||||| ||    
T  43394053 aaaattggaccaatttgaataaaagaaaataagttaagggacgtctttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaaggg 43394152  T
Q  224 accagcatatcaattaag 241  Q
    ||| ||| ||||||||||    
T  43394153 accggcagatcaattaag 43394170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 25 - 204
Target Start/End: Original strand, 46903524 - 46903703
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||| |||||        ||||||||||||| |||    
T  46903524 agaagaagaaagtaaataaattaggtgttggtgatacactataaaatctaatagacctccgtaatccaacggtctttttttttaggggattaaaatcatc 46903623  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||| ||| |||||||||||||||| |||||||| || |||| ||||||| ||| |||||| ||||| |||||||||||||    
T  46903624 aaaattgtaccaaattgaataaaagaaataagttaaaggacgtgtttgaaaaacttaagatttatgggaccaaattgaat 46903703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 25 - 204
Target Start/End: Original strand, 47431087 - 47431266
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||||||||| ||||||||| |||||||||| |||||||| | |||||||| |||||        |||||||||||||||||    
T  47431087 agaagaagaaagtaaataaattaggtgtgggtgatacactataaaatctaatagacctccataatccaacggtctctttttttaggggattaaaattatc 47431186  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||| ||||||||||||||| |||| |||||||| |||| || ||||||| ||| |||| |||||||||||||||||||||    
T  47431187 aaaattggaccaaattgaacaaaagaaataagttaaggaacgtgtttgaaaaagttaaaacttatgagaccaaattgaat 47431266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 25 - 242
Target Start/End: Original strand, 35759131 - 35759348
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||| |||||            |||||||||||||    
T  35759131 agaagaagaaagtaaataaattaggtgttggtgatacactgtaaaatctgatagacattcgtaatccaacggtctgttttttttttagattaaaattatc 35759230  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaagga 224  Q
    ||| |||||||||||||||||||| |||||| | ||||||| ||||||||||| |||||||||||| ||| |||||||||        |||||||| |||    
T  35759231 aaaattggaccaaattgaataaaagaaataaattaagggacgtgtttgagaaagttaagacttatgggactaaattgaataaaagaaataagttaaggga 35759330  T
Q  225 ccagcatatcaattaagc 242  Q
    || ||| |||||||||||    
T  35759331 ccggcagatcaattaagc 35759348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 25 - 204
Target Start/End: Original strand, 2233205 - 2233384
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| ||||| |||||||||||||||||||||  |||||||||| ||||| || | |||||||| | |||        || ||||||||||||||    
T  2233205 agaagaagaaagtaattaaattaggtgttggtgatacgctataaaatcttatagatctccataatccaacgatctctttttttagaggattaaaattatc 2233304  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||| |||||||||||||||||||| |||||||| ||||||||||||||| ||| ||||||||||||||||| ||||||||    
T  2233305 aaaattggaccaaattgaataaaagaaataagttaagggacatgtttgacaaagttaagacttatgagaccgaattgaat 2233384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 25 - 204
Target Start/End: Complemental strand, 17116419 - 17116241
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| ||| |||||||||||||||||||||||| |||||| |||||| ||||| |||||||||| ||| |        |||| ||||||||||||    
T  17116419 agaagaagaaagtgaataaattaggtgttggtgatacactataaactctgatggacctccgtaatccaacggtgtcattttttaggg-attaaaattatc 17116321  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||| ||| |||||||||||||||| |||||||| ||||||| ||||||||||| |||| |||||||||||||||||||||    
T  17116320 aaaattgaaccaaattgaataaaagaaataagttaagggacgtgtttgagaaacttaacacttatgagaccaaattgaat 17116241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 25 - 204
Target Start/End: Complemental strand, 46902549 - 46902370
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||| |||||| |||||||| ||||||||||||||||||| ||||||| ||   |||        |||||||||||||||||    
T  46902549 agaagaagaaagtaaataaatttggtgttagtgatacactataaaatctgatagacctccgtaatctaacaatctcttcttttaggggattaaaattatc 46902450  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||| ||| |||||||||||||||| |||||||| ||||||| ||||||||||| |||||| ||||| |||||||||||||    
T  46902449 aaaattgcaccaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagatttatgggaccaaattgaat 46902370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 25 - 243
Target Start/End: Original strand, 23073274 - 23073492
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| ||||||||||||||||||||||||||||   |||||| ||||| |||| |||||| ||| |||||        |||||||||||||||||    
T  23073274 agaagaagaaagtaaataaattaggtgttggtgatacaccgtaaaatttgatacacctccgtaattcaacggtctctttttttaggggattaaaattatc 23073373  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaagga 224  Q
    ||| ||| ||||  |||||||||| |||||||| ||||||||| ||||||||| |||||| ||||| |||||||||||||        ||||||||||||    
T  23073374 aaaattgaaccagtttgaataaaagaaataagttaagggacatctttgagaaagttaagatttatgggaccaaattgaataaaagaaataagttaaagga 23073473  T
Q  225 ccagcatatcaattaagcc 243  Q
    || ||| ||||||||||||    
T  23073474 ccggcagatcaattaagcc 23073492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 45 - 243
Target Start/End: Complemental strand, 54353221 - 54353023
Alignment:
Q  45 ttaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggaccaaattgaat 144  Q
    ||||||||| ||||||||  ||||||||||||||||||||||||||||| |||||         ||||||||||||||| ||| |||||||||||||| |    
T  54353221 ttaggtgttagtgatacacgataaaatctgatagaccttcgtaatccaacggtctctttttttcggggattaaaattataaaaattggaccaaattgagt 54353122  T
Q  145 aaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaaggaccagcatatcaattaagcc 243  Q
    |||| |||||||| ||||||||||||||| ||| |||||||||||| || ||||||||||        ||||||||||||||  || ||||||||||||    
T  54353121 aaaagaaataagttaagggacatgtttgataaagttaagacttatgggatcaaattgaataaaagaaataagttaaaggaccgtcagatcaattaagcc 54353023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 44 - 204
Target Start/End: Original strand, 17742211 - 17742372
Alignment:
Q  44 attaggtgttggtgatacattata-aaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggaccaaattga 142  Q
    ||||||||||| ||||||| | || ||||||||||||||| |||||||||| |||||        |||||||||||||||||||| ||||| |||||| |    
T  17742211 attaggtgttgttgatacactgtataaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattatcaaaattggatcaaattta 17742310  T
Q  143 ataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    |||||| |||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||    
T  17742311 ataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaat 17742372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 44 - 204
Target Start/End: Original strand, 19043531 - 19043692
Alignment:
Q  44 attaggtgttggtgatacattata-aaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggaccaaattga 142  Q
    ||||||||||| ||||||| | || ||||||||||||||| |||||||||| |||||        |||||||||||||||||||| ||||| |||||| |    
T  19043531 attaggtgttgttgatacactgtataaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattatcaaaattggatcaaattta 19043630  T
Q  143 ataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    |||||| |||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||    
T  19043631 ataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaat 19043692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 25 - 157
Target Start/End: Original strand, 37610663 - 37610795
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||        |||||||||||||||||    
T  37610663 agaagaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctttttttttaggggattaaaattatc 37610762  T
Q  125 aaagttggaccaaattgaataaaataaataagt 157  Q
    ||| |||||||||||||||||||| ||||||||    
T  37610763 aaaattggaccaaattgaataaaaaaaataagt 37610795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 25 - 184
Target Start/End: Complemental strand, 17741048 - 17740889
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| | |||||        |  ||||||||||||||    
T  17741048 agaagaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagacctccgtaatccgacggtctctatttttaaaggattaaaattatc 17740949  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaaga 184  Q
    ||| ||||| |||||| ||||||| |||||||| ||||||||||||||||||| ||||||    
T  17740948 aaaattggatcaaatttaataaaagaaataagttaagggacatgtttgagaaagttaaga 17740889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 25 - 184
Target Start/End: Complemental strand, 19042368 - 19042209
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| | |||||        |  ||||||||||||||    
T  19042368 agaagaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagacctccgtaatccgacggtctctatttttaaaggattaaaattatc 19042269  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaaga 184  Q
    ||| ||||| |||||| ||||||| |||||||| ||||||||||||||||||| ||||||    
T  19042268 aaaattggatcaaatttaataaaagaaataagttaagggacatgtttgagaaagttaaga 19042209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 42 - 204
Target Start/End: Original strand, 52525276 - 52525438
Alignment:
Q  42 aaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggaccaaattg 141  Q
    ||||||| ||||||||| |||||||||||||| ||  |||||| |||||||| |||||        |||||||||||||||| ||| |||||| ||||||    
T  52525276 aaattagatgttggtgacacattataaaatcttattaaccttcataatccaacggtctctttttttaggggattaaaattattaaaattggactaaattg 52525375  T
Q  142 aataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||||||| |||||||| ||||||  ||||||||||| ||||||||||||||||||||||||||    
T  52525376 aataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgagaccaaattgaat 52525438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 42 - 200
Target Start/End: Original strand, 54354308 - 54354466
Alignment:
Q  42 aaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggaccaaattg 141  Q
    ||||||||||||||||||||| | |||||||||||||||||   ||||||||||||||        |||| ||||||||||||||| |||||||||||||    
T  54354308 aaattaggtgttggtgatacactgtaaaatctgatagacctctataatccaatggtctctttttatagggaattaaaattatcaaaattggaccaaattg 54354407  T
Q  142 aataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaatt 200  Q
    ||| ||| |||||||| ||||||| ||||||||||| |||||||||| | |||||||||    
T  54354408 aatcaaagaaataagttaagggacgtgtttgagaaagttaagacttaagggaccaaatt 54354466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 35 - 204
Target Start/End: Complemental strand, 2232810 - 2232641
Alignment:
Q  35 agtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggac 134  Q
    |||||||||||||||||||| |||||||   |||||||| |||||||| ||||||||||||||||        |||||||||||||||| ||| |||||     
T  2232810 agtaaataaattaggtgttgctgatacaccgtaaaatctcatagacctccgtaatccaatggtctttttttctaggggattaaaattattaaaattggat 2232711  T
Q  135 caaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
     ||||||||||||| |||||| | ||||||| | ||||||||| |||||||||||| |||||||||||||    
T  2232710 taaattgaataaaagaaataaattaagggacgtatttgagaaagttaagacttatgtgaccaaattgaat 2232641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 35 - 204
Target Start/End: Original strand, 21729098 - 21729267
Alignment:
Q  35 agtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggac 134  Q
    |||||||||||||||||||| ||||||| |||||||| || ||||||||| ||||||||||||||        || ||||||||||||||||| ||| |     
T  21729098 agtaaataaattaggtgttgatgatacactataaaatatggtagaccttcataatccaatggtctcattttttagaggattaaaattatcaaaattgaat 21729197  T
Q  135 caaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    |||||||||||||| |||||||| ||||||| ||||||||||| |||  ||||||| ||| |||||||||    
T  21729198 caaattgaataaaagaaataagttaagggacgtgtttgagaaagttagaacttatgggactaaattgaat 21729267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 25 - 242
Target Start/End: Complemental strand, 37609539 - 37609322
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||||||||||| ||| ||| ||| |||||| |||||||| | |||||||| |||||        ||||||||||||||||     
T  37609539 agaagaagaaagtaaataaattaggtgttgatgagacactattaaatcttatagacctccctaatccaacggtctctttttttaggggattaaaattatt 37609440  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaagga 224  Q
    ||| ||||| |||||||||||||| ||||||||  |||||| ||||||||||| |||||||||||  ||||||||| |||        ||||||||||||    
T  37609439 aaaattggatcaaattgaataaaagaaataagttgagggacgtgtttgagaaagttaagacttatatgaccaaattaaataaaagaaataagttaaagga 37609340  T
Q  225 ccagcatatcaattaagc 242  Q
    || ||| |||||||||||    
T  37609339 ccggcagatcaattaagc 37609322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 39 - 204
Target Start/End: Original strand, 53180718 - 53180883
Alignment:
Q  39 aataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggaccaaa 138  Q
    |||||||||||||||||||||||| |||| |||||||||||||| |||||||||| |||||        || ||||||||||||| ||| |||||| |||    
T  53180718 aataaattaggtgttggtgatacactatacaatctgatagacctccgtaatccaacggtctccttttttagaggattaaaattattaaaattggactaaa 53180817  T
Q  139 ttgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    |||||||||| |||||||| || | || ||||||||||| ||| ||||||||||| ||||||||||    
T  53180818 ttgaataaaaaaaataagttaaagaacgtgtttgagaaagttacgacttatgagatcaaattgaat 53180883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 35 - 204
Target Start/End: Complemental strand, 55209989 - 55209821
Alignment:
Q  35 agtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggac 134  Q
    |||||||||||||||||||||| ||||| |||||| |||||||||||| ||||||||||||||||         | ||||||||||||||||| ||||||    
T  55209989 agtaaataaattaggtgttggtaatacactataaattctgatagacctccgtaatccaatggtctcttttttc-gtggattaaaattatcaaaattggac 55209891  T
Q  135 caaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    |||||| ||||||| |||||| | ||||||| ||||||||||| |||| |||||||  ||||||||||||    
T  55209890 caaattaaataaaagaaataaattaagggacgtgtttgagaaagttaaaacttatggaaccaaattgaat 55209821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 44 - 204
Target Start/End: Original strand, 5691014 - 5691173
Alignment:
Q  44 attaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggaccaaattgaa 143  Q
    ||||||||||||||||||| | ||||||||||||||||| |||||||||| |||||        |||||||| ||||||||||| |||||| || || ||    
T  5691014 attaggtgttggtgatacactgtaaaatctgatagacctccgtaatccaacggtctctttttttaggggatttaaattatcaaaattggac-aagtttaa 5691112  T
Q  144 taaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||||| |||||||| ||||||| |||||||||||||||||||||||| ||| |||||||||    
T  5691113 taaaagaaataagttaagggacgtgtttgagaaaattaagacttatgtgactaaattgaat 5691173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 35 - 200
Target Start/End: Complemental strand, 11347020 - 11346855
Alignment:
Q  35 agtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggac 134  Q
    |||||||||||||||||||||||||||| |||| ||| || ||||||||| ||||||||||||||        |||||||||||||||||||| |||||     
T  11347020 agtaaataaattaggtgttggtgatacactatacaatatggtagaccttcataatccaatggtctctcttttcaggggattaaaattatcaaaattggaa 11346921  T
Q  135 caaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaatt 200  Q
    |||||||||||||| |||||| | |||| || ||||||| ||| |||||| ||||  |||||||||    
T  11346920 caaattgaataaaagaaataaattaaggcacgtgtttgataaagttaagatttatatgaccaaatt 11346855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 26 - 177
Target Start/End: Complemental strand, 5689936 - 5689785
Alignment:
Q  26 gaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatca 125  Q
    |||| ||| ||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||| |||||        |  |||||||||||||||    
T  5689936 gaagaagaaagtaaataaattaagtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctcttgttttaaaggattaaaattatca 5689837  T
Q  126 aagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaa 177  Q
    || |||||||||||| ||||||| |||||||| ||||||| |||||| ||||    
T  5689836 aaattggaccaaatttaataaaagaaataagttaagggacgtgtttgggaaa 5689785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 35 - 242
Target Start/End: Original strand, 53765876 - 53766083
Alignment:
Q  35 agtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggac 134  Q
    ||||||||||| || || |||||||||| | ||||||||  ||||||| ||||||||||| || |        |||||||||||||||| ||| |||||     
T  53765876 agtaaataaatcagatggtggtgatacactgtaaaatctcgtagacctccgtaatccaatagtttctctttttaggggattaaaattattaaaattggat 53765975  T
Q  135 caaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaaggaccagcatatc 234  Q
    |||||||||||||| |||||||| ||||||| |||||||||||||||||||||| |  ||||||||||||        |||||||| ||||| ||| |||    
T  53765976 caaattgaataaaagaaataagttaagggacgtgtttgagaaaattaagacttacggaaccaaattgaataaaagaaataagttaagggacccgcagatc 53766075  T
Q  235 aattaagc 242  Q
    ||||||||    
T  53766076 aattaagc 53766083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 35 - 243
Target Start/End: Original strand, 10979085 - 10979293
Alignment:
Q  35 agtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggac 134  Q
    |||||||||||||| |||||||||||||   |||||| ||||| |||| ||||||||||||||||        | |||| ||||||||||||| ||| |     
T  10979085 agtaaataaattagatgttggtgatacaccgtaaaatttgataaacctccgtaatccaatggtctcttttttaaagggactaaaattatcaaaattgaat 10979184  T
Q  135 caaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaaggaccagcatatc 234  Q
    |||||||||||||| |||||||| ||  ||| ||||||||||| |||||| ||||| |||||||||||||        |||||||| ||||| ||| |||    
T  10979185 caaattgaataaaagaaataagtgaaatgacgtgtttgagaaatttaagatttatgggaccaaattgaataaaagaaataagttaagggaccggcagatc 10979284  T
Q  235 aattaagcc 243  Q
    |||||||||    
T  10979285 aattaagcc 10979293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 112 - 243
Target Start/End: Complemental strand, 23091322 - 23091191
Alignment:
Q  112 gattaaaattatcaaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnn 211  Q
    ||||||||||||||||||||||||||||||||||||| || ||||| ||| ||| ||||||||||| |||||||||||| |||||||||||||           
T  23091322 gattaaaattatcaaagttggaccaaattgaataaaagaattaagttaagagacgtgtttgagaaagttaagacttatgtgaccaaattgaataaaagaa 23091223  T
Q  212 ntaagttaaaggaccagcatatcaattaagcc 243  Q
     ||||||||| |||| ||| ||||||||||||    
T  23091222 ataagttaaaagaccggcagatcaattaagcc 23091191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 25 - 243
Target Start/End: Original strand, 11348372 - 11348589
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| ||||||| |||||||||| ||||||| | ||||||||||||||||||| |||||| ||| |||||        | || ||||||||||||    
T  11348372 agaagaagaaagtaaattaattaggtgt-ggtgatatactataaaatctgatagacctccgtaattcaacggtctctttttctaaggaattaaaattatc 11348470  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaagga 224  Q
    ||| ||||| |||||| ||||||| |||| ||| |||| |||||| ||| ||| |||| |||||||||||||||||||||        |||||||| |||    
T  11348471 aaaattggatcaaattaaataaaagaaattagttaaggaacatgtatgataaagttaatacttatgagaccaaattgaataaaagaaataagttaaggga 11348570  T
Q  225 ccagcatatcaattaagcc 243  Q
    || ||| ||||||||||||    
T  11348571 ccggcagatcaattaagcc 11348589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 35 - 200
Target Start/End: Original strand, 47917523 - 47917687
Alignment:
Q  35 agtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggac 134  Q
    |||||||||||| ||||||||| ||||| |||||||||||||| |||| ||||||||||   |||        |||||||||||||||| ||| || ||     
T  47917523 agtaaataaattcggtgttggtaatacactataaaatctgataaacctccgtaatccaacaatctttatttttaggggattaaaattattaaaattagat 47917622  T
Q  135 caaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaatt 200  Q
    |||||||||||||| ||||||||  |||||| |||||||||||| ||||| |||||||||||||||    
T  47917623 caaattgaataaaagaaataagt-tagggacgtgtttgagaaaactaagatttatgagaccaaatt 47917687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 53764563 - 53764467
Alignment:
Q  108 aggggattaaaattatcaaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    |||||||||||||||||||| || ||| ||||||||||||| |||||||| || |||| ||||||||||| ||||||||||||||||||||||||||    
T  53764563 aggggattaaaattatcaaaatttgactaaattgaataaaagaaataagttaaaggacgtgtttgagaaagttaagacttatgagaccaaattgaat 53764467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 25 - 165
Target Start/End: Complemental strand, 35758222 - 35758082
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||| ||| |           ||||||||||||||    
T  35758222 agaagaagaaagtaaataaattaggtgttggtgatacactgtaaaatctgatagacattcgtaatccaacggtttgttttttttttggattaaaattatc 35758123  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggac 165  Q
    ||| |||||||||||||||||||| |||||||| |||||||    
T  35758122 aaaattggaccaaattgaataaaagaaataagttaagggac 35758082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 204
Target Start/End: Original strand, 50881028 - 50881188
Alignment:
Q  37 taaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggacca 136  Q
    ||||||||||||||||||||| |||| |||||||| || ||||||||| |||||||||  | |        |||||||||||||||||||| ||| || |    
T  50881028 taaataaattaggtgttggtggtacactataaaatatggtagaccttcataatccaatttttt-------taggggattaaaattatcaaaattgaacta 50881120  T
Q  137 aattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    |||||||||||| |||||| | ||||||| ||||||||||| |||||||||||| |  ||||||||||    
T  50881121 aattgaataaaagaaataaattaagggacgtgtttgagaaagttaagacttatgtggtcaaattgaat 50881188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 26 - 204
Target Start/End: Complemental strand, 47429839 - 47429666
Alignment:
Q  26 gaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtc--tannnnnnnaggggattaaaattat 123  Q
    |||| ||| |||||||||||||| ||||||||||||| |||||||||| |||||||| ||||||||||  |||  |        ||||||||||||||||    
T  47429839 gaagaagaaagtaaataaattagatgttggtgatacactataaaatctaatagacctccgtaatccaacagtctttttttttttaggggattaaaattat 47429740  T
Q  124 caaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    |||| ||||||||||||||| |||| |      |||| |||| ||||||||||| ||||||||||||||||||||||||||    
T  47429739 caaaattggaccaaattgaacaaaaga------taaa-ggacgtgtttgagaaagttaagacttatgagaccaaattgaat 47429666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 37 - 200
Target Start/End: Original strand, 15290402 - 15290564
Alignment:
Q  37 taaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggacca 136  Q
    |||||||||||||| ||| ||||||| |||||||| || ||||||||| |||| |||||||||        |  | ||||||||||| ||| ||||| ||    
T  15290402 taaataaattaggtattgatgatacactataaaatatggtagaccttcataattcaatggtcttttttttaaatg-attaaaattattaaaattggatca 15290500  T
Q  137 aattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaatt 200  Q
    |||||||||||  |||||| | ||  |||||||||||||||||||||||||||| || ||||||    
T  15290501 aattgaataaatgaaataatttaatagacatgtttgagaaaattaagacttatgtgatcaaatt 15290564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 110 - 204
Target Start/End: Complemental strand, 53178834 - 53178740
Alignment:
Q  110 gggattaaaattatcaaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||||||||||| |||||| ||||| |||||||||||||| |||||||| |||| || ||||||||||| ||||| ||||||| | ||||||||||    
T  53178834 gggattaaaatgatcaaaattggatcaaattgaataaaagaaataagttaaggaacgtgtttgagaaagttaaggcttatgaaatcaaattgaat 53178740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 131 - 204
Target Start/End: Complemental strand, 43392738 - 43392665
Alignment:
Q  131 ggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    |||||||||||||||||| ||||||||  |||||| || |||||||| ||||||||||||||||||||||||||    
T  43392738 ggaccaaattgaataaaagaaataagttcagggacgtgcttgagaaagttaagacttatgagaccaaattgaat 43392665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 162
Target Start/End: Original strand, 55210808 - 55210945
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||| || |||||| |||  || |        || ||||||||||||||    
T  55210808 agaagaagaaagtaaataaattatgtgttggtgatacattataaaatctgatagatctccgtaattcaacagtatctttttttagtggattaaaattatc 55210907  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagg 162  Q
    ||| |||  ||||||| ||||||| |||||||| ||||    
T  55210908 aaaattgatccaaatttaataaaagaaataagttaagg 55210945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 111 - 204
Target Start/End: Original strand, 17117387 - 17117478
Alignment:
Q  111 ggattaaaattatcaaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    |||||||||| |||||| || | ||||||||||||||| ||| |  | ||||||| ||||||||||| ||||||||||||||||||||||||||    
T  17117387 ggattaaaatcatcaaaatttgcccaaattgaataaaaaaaaaa--ttaagggacgtgtttgagaaacttaagacttatgagaccaaattgaat 17117478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 25 - 148
Target Start/End: Complemental strand, 50879905 - 50879782
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| || ||| ||||||||||||||||||||| ||||||||||||||||||| ||||||| || | | |        | |||||||||||||||    
T  50879905 agaagaagaaaggaaacaaattaggtgttggtgatacactataaaatctgatagacctccgtaatctaacgatttttttttctatgggattaaaattatc 50879806  T
Q  125 aaagttggaccaaattgaataaaa 148  Q
    ||| |||||| |||||||||||||    
T  50879805 aaaattggacaaaattgaataaaa 50879782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 204
Target Start/End: Original strand, 46986077 - 46986169
Alignment:
Q  111 ggattaaaattatcaaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||||||||||||||||| || ||||||||| ||||| | |||||||| ||||||| ||||||||| | |||||||||||  |||||||||||||    
T  46986077 ggattaaaattatcaaaatttgaccaaatttaataaga-aaataagttaagggacgtgtttgagagagttaagacttattggaccaaattgaat 46986169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 155
Target Start/End: Complemental strand, 10978206 - 10978093
Alignment:
Q  42 aaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggaccaaattg 141  Q
    |||||||||| |||||||||| |||||||| | ||||||||||||||||||| ||| |        |||||||||||||||| ||| |||||| || |||    
T  10978206 aaattaggtgatggtgatacactataaaattttatagaccttcgtaatccaacggtttctttttttaggggattaaaattattaaaattggactaagttg 10978107  T
Q  142 aataaaataaataa 155  Q
    ||||||| ||||||    
T  10978106 aataaaagaaataa 10978093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 204
Target Start/End: Complemental strand, 23072171 - 23072099
Alignment:
Q  131 ggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    |||||||||||||||||| |||||||| |||| || | ||||||||| |||||||||||| |||||||||||||    
T  23072171 ggaccaaattgaataaaagaaataagttaagg-acgtctttgagaaagttaagacttatgggaccaaattgaat 23072099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 113 - 182
Target Start/End: Original strand, 33113306 - 33113376
Alignment:
Q  113 attaaaattatcaaagttggaccaaattgaat-aaaataaataagtaaagggacatgtttgagaaaattaa 182  Q
    ||||||||||||||| |||||||||||||||| |||| |||||||| ||||||| ||||||| ||| ||||    
T  33113306 attaaaattatcaaaattggaccaaattgaataaaaagaaataagttaagggacgtgtttgaaaaagttaa 33113376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 82
Target Start/End: Complemental strand, 43392812 - 43392767
Alignment:
Q  37 taaataaattaggtgttggtgatacattataaaatctgatagacct 82  Q
    |||||||||| |||||||||| |||| |||||||||||||||||||    
T  43392812 taaataaatttggtgttggtggtacactataaaatctgatagacct 43392767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 33111745 - 33111809
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaat 89  Q
    ||||| ||| |||||||||||||||||| || |||||| |||||||| | |||||||| ||||||    
T  33111745 agaagaagaaagtaaataaattaggtgtgggagatacactataaaattttatagacctccgtaat 33111809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 42 - 89
Target Start/End: Complemental strand, 53764951 - 53764904
Alignment:
Q  42 aaattaggtgttggtgatacattataaaatctgatagaccttcgtaat 89  Q
    |||||| ||||||||||||||  |||||||||||||||||| ||||||    
T  53764951 aaattaagtgttggtgatacaccataaaatctgatagacctccgtaat 53764904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 204
Target Start/End: Original strand, 27750473 - 27750510
Alignment:
Q  167 tgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||||||| |||||||| |||||||||||||||||||||    
T  27750473 tgtttgaaaaaattaaaacttatgagaccaaattgaat 27750510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 50879594 - 50879533
Alignment:
Q  143 ataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    |||||| |||||| | ||||||| ||||| ||||| |||||| ||||| |||||||||||||    
T  50879594 ataaaaaaaataatttaagggacgtgtttaagaaagttaagatttatgggaccaaattgaat 50879533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 35 - 80
Target Start/End: Complemental strand, 53101730 - 53101685
Alignment:
Q  35 agtaaataaattaggtgttggtgatacattataaaatctgatagac 80  Q
    ||||||||||||| |||||||||||||| ||||| ||||| |||||    
T  53101730 agtaaataaattaagtgttggtgatacactataagatctggtagac 53101685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 168
Target Start/End: Complemental strand, 47429678 - 47429642
Alignment:
Q  132 gaccaaattgaataaaataaataagtaaagggacatg 168  Q
    ||||||||||||||||| |||||||| ||||||||||    
T  47429678 gaccaaattgaataaaagaaataagttaagggacatg 47429642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 106; Significance: 4e-53; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 25 - 251
Target Start/End: Complemental strand, 34995569 - 34995344
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| || |||||        ||||||||||||||||     
T  34995569 agaagaagaaagtaaataaattagatgttggtgatacactataaaatctgatagaccttcgtaatctaacggtctgtttttttaggggattaaaattatt 34995470  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaagga 224  Q
    ||| |||||||||||||||||||| |||||||| ||  ||| ||||||||||| ||||||||||||||||||||||||||        ||||||||||||    
T  34995469 aaaattggaccaaattgaataaaagaaataagttaa-agacgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaaagga 34995371  T
Q  225 ccagcatatcaattaagccattaattt 251  Q
    ||  || ||||||||||||||||||||    
T  34995370 ccgacagatcaattaagccattaattt 34995344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 25 - 204
Target Start/End: Original strand, 32348937 - 32349116
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||| |||||        |||||||||||||||||    
T  32348937 agaagaagaaagtaaataaattaggtgttgatgatacactataaaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattatc 32349036  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||| |||||||||||||||||||| |||| ||| ||||||| ||||||||||| ||||||||||| ||||||||||||||    
T  32349037 aaaattggaccaaattgaataaaagaaatcagttaagggacgtgtttgagaaagttaagacttataagaccaaattgaat 32349116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 25 - 204
Target Start/End: Original strand, 34996661 - 34996840
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||        ||| |||||||||||||    
T  34996661 agaagaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagaccttcgtaatccaacggtctgtttttttaggagattaaaattatc 34996760  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||| |||||||||||||||||||| |||||||| ||||||| | ||||||||| |||||||||||| ||| |||||||||    
T  34996761 aaaattggaccaaattgaataaaagaaataagttaagggacgtatttgagaaagttaagacttatgggactaaattgaat 34996840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 26 - 245
Target Start/End: Original strand, 3000694 - 3000913
Alignment:
Q  26 gaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatca 125  Q
    |||| ||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| | |||        ||||||||||||||||||    
T  3000694 gaagaagaaagtaaataaattaggtgttagtgatacactataaaatctgatagaccttcgtaatccaacgatctgtgtttttaggggattaaaattatca 3000793  T
Q  126 aagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaaggac 225  Q
    || |||||| ||||||||||||| |||||||| ||||||  ||||||||||| |||||| ||||| |||||||||||||        |||||||| ||||    
T  3000794 aaattggactaaattgaataaaagaaataagttaagggaggtgtttgagaaagttaagatttatgggaccaaattgaataaaagaaataagttaagggac 3000893  T
Q  226 cagcatatcaattaagccat 245  Q
    |  || ||||||||||||||    
T  3000894 cgacaaatcaattaagccat 3000913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 25 - 243
Target Start/End: Original strand, 32713783 - 32714001
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||||||||||||||||||| | |||||||| |||||||| |||||||||| ||||         |||||||||||||||||    
T  32713783 agaagaagaaagtaaataaattaggtgttggtgatacactgtaaaatcttatagacctccgtaatccaacggtcactttttttaggggattaaaattatc 32713882  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaagga 224  Q
    ||| |||||||||||||||||||| |||||||| ||||||| ||||||||||| |||||| |||||  |||||| |||||        ||||||| ||||    
T  32713883 aaaattggaccaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagatttatggaaccaaactgaataaaagaaataagttacagga 32713982  T
Q  225 ccagcatatcaattaagcc 243  Q
    |||||| ||||||||||||    
T  32713983 ccagcagatcaattaagcc 32714001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 35 - 204
Target Start/End: Original strand, 11801252 - 11801421
Alignment:
Q  35 agtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggac 134  Q
    |||||||||||||||||||  ||||||| |||||||| |||||||||| |||||||||| |||||        |||||||||||||||||||| ||||||    
T  11801252 agtaaataaattaggtgttaatgatacactataaaatttgatagacctccgtaatccaacggtctcttttttgaggggattaaaattatcaaaattggac 11801351  T
Q  135 caaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    |||||||||||||| |||| ||| ||||||| ||||||||||| |||||||||||  |||||||||||||    
T  11801352 caaattgaataaaagaaatcagttaagggacgtgtttgagaaagttaagacttataggaccaaattgaat 11801421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 25 - 204
Target Start/End: Complemental strand, 32348026 - 32347847
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||||||||||| ||||||| ||||||||||||||||||  |||||||||| | |||        |||||||||||||||||    
T  32348026 agaagaagaaagtaaataaattaggtgttgatgatacactataaaatctgatagacccccgtaatccaacgttctctttttttaggggattaaaattatc 32347927  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||| |||||||||||||||||||| |||| | | ||||||| ||||||||||| |||||||||||  |||||||||||||    
T  32347926 aaaattggaccaaattgaataaaagaaatcacttaagggacgtgtttgagaaagttaagacttatatgaccaaattgaat 32347847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 25 - 253
Target Start/End: Complemental strand, 18573102 - 18572875
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| ||||||||||||| |||||||||||||| | |||||| |||||||||| ||||||||||  || |        |||||||||||||||||    
T  18573102 agaagaagaaagtaaataaattatgtgttggtgatacactgtaaaatttgatagacctccgtaatccaacagtgt-cttttttaggggattaaaattatc 18573004  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaagga 224  Q
    ||| |||| |||| |||||||||| |||||||| ||||||| | ||| ||||| |||||||||||| |||||||||||||        |||||||| |||    
T  18573003 aaaattggcccaatttgaataaaagaaataagttaagggacgtttttaagaaagttaagacttatgggaccaaattgaataaaagaaataagttaacgga 18572904  T
Q  225 ccagcatatcaattaagccattaattttt 253  Q
    || ||| |||||||||||| || ||||||    
T  18572903 ccggcagatcaattaagcctttgattttt 18572875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 25 - 204
Target Start/End: Complemental strand, 32712573 - 32712394
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| ||||||||| ||||||||||||| |||| |||||||| |||||||||| |||||||||| |||||        |||||||||||||||||    
T  32712573 agaagaagaaagtaaataagttaggtgttggtggtacactataaaatttgatagacctccgtaatccaacggtctctttttttaggggattaaaattatc 32712474  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||| |||||||||||||||||||| |||||||| ||| ||| | |||||||||  ||||| ||||  ||||||| |||||    
T  32712473 aaaattggaccaaattgaataaaagaaataagttaagagacgtatttgagaaatgtaagatttataggaccaaactgaat 32712394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 26 - 189
Target Start/End: Original strand, 19383056 - 19383218
Alignment:
Q  26 gaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatca 125  Q
    |||| ||| |||||||||||||| ||||| ||||||| |||||||||||||||||| ||||||||||| |||||        |||| |||||||||||||    
T  19383056 gaagaagaaagtaaataaattagatgttg-tgatacactataaaatctgatagaccatcgtaatccaacggtct--ctttttagggcattaaaattatca 19383152  T
Q  126 aagttggaccaaattgaat--aaaataaataagtaaagggacatgtttgagaaaattaagacttat 189  Q
    || || || ||||||||||  |||| |||||||| ||||||| ||||||||||| |||||||||||    
T  19383153 aaattagatcaaattgaataaaaaaaaaataagttaagggacgtgtttgagaaagttaagacttat 19383218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 35 - 142
Target Start/End: Complemental strand, 21094613 - 21094506
Alignment:
Q  35 agtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggac 134  Q
    |||||||||||||||||||||||||||| ||||||||||  ||||||| |||||||||| |||||        ||||||||||| |||||||| |||||     
T  21094613 agtaaataaattaggtgttggtgatacactataaaatctagtagacctccgtaatccaacggtctctttttttaggggattaaagttatcaaaattggat 21094514  T
Q  135 caaattga 142  Q
    ||||||||    
T  21094513 caaattga 21094506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 27719941 - 27719879
Alignment:
Q  37 taaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtct 99  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||    
T  27719941 taaataaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtct 27719879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 204
Target Start/End: Original strand, 29479177 - 29479273
Alignment:
Q  108 aggggattaaaattatcaaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    |||||||| ||||||| ||| |||||||||||||||||||| |||||||| || |||| || |||||||| |||| ||||||| ||||| |||||||    
T  29479177 aggggattgaaattattaaaattggaccaaattgaataaaagaaataagttaaaggacgtgattgagaaagttaaaacttatgggaccagattgaat 29479273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 35 - 93
Target Start/End: Original strand, 21095289 - 21095347
Alignment:
Q  35 agtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaa 93  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||    
T  21095289 agtaaataaattaggtgttggtgatacactataaaatctggtagacctccgtaatccaa 21095347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 204
Target Start/End: Original strand, 18574299 - 18574372
Alignment:
Q  131 ggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    |||||||||||||||||| ||||||||  |||||| || |||||||| ||||||||||||  ||||||||||||    
T  18574299 ggaccaaattgaataaaagaaataagttcagggacgtgcttgagaaagttaagacttatggaaccaaattgaat 18574372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 18574213 - 18574270
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagacct 82  Q
    ||||| ||| |||||||||||  |||||||||| |||| |||||||||||||||||||    
T  18574213 agaagaagaaagtaaataaatccggtgttggtggtacactataaaatctgatagacct 18574270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 82
Target Start/End: Complemental strand, 29477948 - 29477901
Alignment:
Q  35 agtaaataaattaggtgttggtgatacattataaaatctgatagacct 82  Q
    ||||||||||| ||||||||||||||||  |||||||||| |||||||    
T  29477948 agtaaataaatcaggtgttggtgatacaccataaaatctggtagacct 29477901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 7629723 - 7629773
Alignment:
Q  42 aaattaggtgttggtgatacattataaaatctgatagaccttcgtaatcca 92  Q
    ||||||| |||||| |||||| |||||||||||||| | ||||||||||||    
T  7629723 aaattagatgttggagatacactataaaatctgataaatcttcgtaatcca 7629773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 13561476 - 13561423
Alignment:
Q  40 ataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaa 93  Q
    ||||||||||||||||||||||| ||| | ||||||| ||||||| | ||||||    
T  13561476 ataaattaggtgttggtgatacactattagatctgatggaccttctttatccaa 13561423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 106; Significance: 4e-53; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 25 - 243
Target Start/End: Complemental strand, 12372532 - 12372314
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |        |||| ||||||||||||    
T  12372532 agaagaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagaccttcgtaatccaacggtatgtttttttagggtattaaaattatc 12372433  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaagga 224  Q
    ||| ||||| |||||||||||||| |||||||| ||| ||| ||||||||||| ||||||||||||||||||||||||||        |||||||| |||    
T  12372432 aaaattggatcaaattgaataaaacaaataagttaagagacgtgtttgagaaagttaagacttatgagaccaaattgaataaaacaaataagttaaggga 12372333  T
Q  225 ccagcatatcaattaagcc 243  Q
    || ||| ||||||||||||    
T  12372332 ccggcagatcaattaagcc 12372314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 45 - 204
Target Start/End: Original strand, 9083216 - 9083375
Alignment:
Q  45 ttaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggaccaaattgaat 144  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||| |||||        |||||||||||||||||||| ||||||||||||||||    
T  9083216 ttaggtgttggtgatacactataaaatcttatagaccttcgtaatccaacggtctccttttttaggggattaaaattatcaaaattggaccaaattgaat 9083315  T
Q  145 aaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    |||||||| |||| ||||||| ||||||||||| |||||||||||| |||||||||||||    
T  9083316 aaaataaaaaagttaagggacgtgtttgagaaagttaagacttatgggaccaaattgaat 9083375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 35 - 204
Target Start/End: Original strand, 13278141 - 13278310
Alignment:
Q  35 agtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggac 134  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||| |||||        | |||||||||||||||||| |||||     
T  13278141 agtaaataaattaggtgttggtgatacactataaaatctgatagacctccctaatccaacggtctctttttctatgggattaaaattatcaaaattggat 13278240  T
Q  135 caaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    |||||||||  ||| |||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||    
T  13278241 caaattgaagtaaaaaaataagttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaat 13278310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 25 - 204
Target Start/End: Complemental strand, 19229056 - 19228877
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||||||||||| ||||||| |||||||||| |||||||| |||||||||| |||||        |||||||||||||||||    
T  19229056 agaagaagaaagtaaataaattaggtgttgatgatacactataaaatctaatagacctccgtaatccaacggtctctttttttaggggattaaaattatc 19228957  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||| |||||||||||||||||||| |||| ||| |||| || ||||||||||| |||||||||||  |||||||||||||    
T  19228956 aaaattggaccaaattgaataaaagaaatcagttaaggaacgtgtttgagaaagttaagacttataggaccaaattgaat 19228877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 25 - 204
Target Start/End: Original strand, 19229973 - 19230152
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| ||||||||||||| |||||| ||||||| |||||||| |||||||||| |||||||||| |||||        |||||||||||||||||    
T  19229973 agaagaagaaagtaaataaattaagtgttgatgatacactataaaatttgatagacctccgtaatccaacggtctcttttttgaggggattaaaattatc 19230072  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||| |||||||||||||||||||| |||| ||| ||||||| ||||||||||| |||||||||||  |||||||||||||    
T  19230073 aaaattggaccaaattgaataaaagaaatcagttaagggacgtgtttgagaaagttaagacttataggaccaaattgaat 19230152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 39 - 204
Target Start/End: Original strand, 18655566 - 18655731
Alignment:
Q  39 aataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggaccaaa 138  Q
    |||||||||  |||||||||||||   ||||||||||||||| |||||||| ||| |||||        |||||||||||||||||||||||||||||||    
T  18655566 aataaattaattgttggtgatacaccgtaaaatctgatagactttcgtaattcaacggtctctttttttaggggattaaaattatcaaagttggaccaaa 18655665  T
Q  139 ttgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    |||||||||| |||||| | ||||||| ||||||||||| |||||||||||| |||||||||||||    
T  18655666 ttgaataaaagaaataaattaagggacgtgtttgagaaagttaagacttatgtgaccaaattgaat 18655731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 42 - 243
Target Start/End: Original strand, 39350562 - 39350763
Alignment:
Q  42 aaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggaccaaattg 141  Q
    ||||||||||||||||||||| | ||||||||||||||||| |||||||||| |||||        || ||||||||||||| ||| ||||||||||||     
T  39350562 aaattaggtgttggtgatacactgtaaaatctgatagacctccgtaatccaacggtctctttttttagaggattaaaattataaaaattggaccaaatta 39350661  T
Q  142 aataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaaggaccagcatatcaattaag 241  Q
    | ||||| |||||||| ||||||| ||||||||||| |||||||||||| ||| |||||||||        |||||||| ||||| ||||||||||||||    
T  39350662 agtaaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggactaaattgaataaaagaaataagttaagggaccggcatatcaattaag 39350761  T
Q  242 cc 243  Q
    ||    
T  39350762 cc 39350763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 25 - 200
Target Start/End: Original strand, 6803525 - 6803699
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||||| ||||||||||||| ||||||||||||||||| || |||||| || |||||        |  ||||||||||||||    
T  6803525 agaagaagaaagtaaataaattagatgttggtgatacactataaaatctgatagacttt-gtaatctaacggtctgtttttttaaaggattaaaattatc 6803623  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaatt 200  Q
    ||| |||||||||||||||||||| |||||||| |||  ||||||||||||||||||||||||||| |||||||||    
T  6803624 aaaattggaccaaattgaataaaagaaataagttaagaaacatgtttgagaaaattaagacttatgtgaccaaatt 6803699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 25 - 243
Target Start/End: Original strand, 12373617 - 12373839
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggg----gattaaaat 120  Q
    ||||| ||| |||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||| |||||                |||||||||    
T  12373617 agaagaagaaagtaaataaattaggtgttggtgatacagtgtaaaatctgatagacattcgtaatccaacggtctgtttttttttttttttgattaaaat 12373716  T
Q  121 tatcaaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaa 220  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||| ||| |||||||||        ||||||||    
T  12373717 tatcaaaattggaccaaattgaataaaataaataagttaagggacgtgtttgagaaagttaagacttatgggactaaattgaataaaagaaataagttaa 12373816  T
Q  221 aggaccagcatatcaattaagcc 243  Q
    |||||| ||  ||||||||||||    
T  12373817 aggaccggcggatcaattaagcc 12373839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 40 - 204
Target Start/End: Complemental strand, 18654500 - 18654335
Alignment:
Q  40 ataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggaccaaat 139  Q
    ||||||||||||||||||||||| | ||||||||||||||||| |||||||||| |||||        | ||||||||||| |||||| |||||||||||    
T  18654500 ataaattaggtgttggtgatacactgtaaaatctgatagacctccgtaatccaacggtctcttttttaatgggattaaaatgatcaaaattggaccaaat 18654401  T
Q  140 tg-aataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    |  ||||||| |||||||| ||||||| ||||||||||| |||||||||||| |||||||||||||    
T  18654400 tttaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggaccaaattgaat 18654335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 41 - 204
Target Start/End: Complemental strand, 9082181 - 9082018
Alignment:
Q  41 taaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggaccaaatt 140  Q
    ||||||||||||| | |||| | ||||||||||||||||| | ||| |||||| |||||        |||||||||||||||||||| ||||||||||||    
T  9082181 taaattaggtgttagcgatatactataaaatctgatagacatccgtgatccaacggtctcattttctaggggattaaaattatcaaaattggaccaaatt 9082082  T
Q  141 gaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    |||||||| |||||||| ||||||| ||||||||||| ||||||||||||  | ||||||||||    
T  9082081 gaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatggaatcaaattgaat 9082018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 35 - 204
Target Start/End: Complemental strand, 39164262 - 39164095
Alignment:
Q  35 agtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggac 134  Q
    |||||||||||||||||||||||||||| |||||||| |||||| ||| |||||| |||  ||||        |||| |||||||| |||||| ||||||    
T  39164262 agtaaataaattaggtgttggtgatacactataaaatttgataggcctccgtaattcaacagtcttttttttaaggg-attaaaat-atcaaaattggac 39164165  T
Q  135 caaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    |||||||||||||| |||||||| ||||||| ||||||| ||| |||||||||||||||| |||||||||    
T  39164164 caaattgaataaaagaaataagttaagggacgtgtttgataaagttaagacttatgagactaaattgaat 39164095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 25 - 243
Target Start/End: Complemental strand, 39349698 - 39349480
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| ||||||||||||||||||||||||| ||  ||||||||| |||||||| ||||||| || ||||         ||||||||||||||||     
T  39349698 agaagaagaaagtaaataaattaggtgttggtgatccacgataaaatctaatagacctccgtaatcaaacggtcactttttttaggggattaaaattata 39349599  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaagga 224  Q
    ||| ||| |||||||||| ||||| |||||||| || |||| ||||||||||| |||||| |||||  ||||||||||||        ||||||||||||    
T  39349598 aaaattgaaccaaattgagtaaaagaaataagttaaaggacgtgtttgagaaagttaagagttatggaaccaaattgaataaaagaaataagttaaagga 39349499  T
Q  225 ccagcatatcaattaagcc 243  Q
    ||  || ||||||||||||    
T  39349498 ccgtcagatcaattaagcc 39349480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 35 - 243
Target Start/End: Complemental strand, 13277019 - 13276819
Alignment:
Q  35 agtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggac 134  Q
    |||||||||||||||||||||||        |||||| ||||| |||| |||||||||| |||||        | |||||||||||||||||| || |||    
T  13277019 agtaaataaattaggtgttggtg--------taaaatgtgatacacctccgtaatccaacggtctttttttttaagggattaaaattatcaaaatttgac 13276928  T
Q  135 caaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaaggaccagcatatc 234  Q
    |||||||||||||| |||||||| ||||||| |||||||||||||||||| ||||  |||||||||||||        |||||||| ||||| ||| |||    
T  13276927 caaattgaataaaagaaataagttaagggacgtgtttgagaaaattaagatttataggaccaaattgaataaaagaaataagttaagggaccggcagatc 13276828  T
Q  235 aattaagcc 243  Q
    |||||||||    
T  13276827 aattaagcc 13276819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 25 - 157
Target Start/End: Original strand, 4032925 - 4033057
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||| ||||||||  ||||||||||||||||||||||||||| |||||||||| |||||        || |||||||||||||     
T  4032925 agaagaagaaagtaaataaactaggtgttaatgatacattataaaatctgatagacctccgtaatccaacggtctctttttttagtggattaaaattatt 4033024  T
Q  125 aaagttggaccaaattgaataaaataaataagt 157  Q
    ||| ||||||||| || ||||||| ||||||||    
T  4033025 aaaattggaccaagttaaataaaaaaaataagt 4033057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 157
Target Start/End: Complemental strand, 4032024 - 4031907
Alignment:
Q  40 ataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggaccaaat 139  Q
    ||||||||||||||||||||||| ||||||||||| ||||| | |||||| ||| |||||        || ||||||||||||||||| |||||| ||||    
T  4032024 ataaattaggtgttggtgatacactataaaatctggtagacttccgtaattcaacggtctctttttttagtggattaaaattatcaaaattggactaaat 4031925  T
Q  140 tgaataaaataaataagt 157  Q
    ||||||||| ||||||||    
T  4031924 tgaataaaagaaataagt 4031907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 142 - 200
Target Start/End: Complemental strand, 6802075 - 6802017
Alignment:
Q  142 aataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaatt 200  Q
    ||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  6802075 aataaaagaaataagttaagggacgtgtttgagaaaattaagacttatgagaccaaatt 6802017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 135 - 204
Target Start/End: Complemental strand, 8447185 - 8447116
Alignment:
Q  135 caaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    |||||||||||||| |||||||| ||||||| ||||||||||| |||| ||||||| |||||||||||||    
T  8447185 caaattgaataaaagaaataagttaagggacgtgtttgagaaagttaaaacttatgggaccaaattgaat 8447116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 102; Significance: 1e-50; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 37 - 243
Target Start/End: Complemental strand, 9244271 - 9244065
Alignment:
Q  37 taaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggacca 136  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||||| | |||||        | |||||||||||||||||| ||| ||||    
T  9244271 taaataaattaggtgttggtgatacactataaaatctgatagacctccgtaatcctacggtctcattttttaagggattaaaattatcaaaattgaacca 9244172  T
Q  137 aattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaaggaccagcatatcaa 236  Q
    ||||||||||||||||||||| ||||||| ||||||||||| |||| ||||||| |||||||||||||        |||||||| ||||||||| |||||    
T  9244171 aattgaataaaataaataagttaagggacgtgtttgagaaagttaaaacttatgggaccaaattgaataaaagaaataagttaagggaccagcagatcaa 9244072  T
Q  237 ttaagcc 243  Q
    |||||||    
T  9244071 ttaagcc 9244065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 37 - 244
Target Start/End: Complemental strand, 26364947 - 26364740
Alignment:
Q  37 taaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggacca 136  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||        || ||||||||||||||||| ||||| ||    
T  26364947 taaataaattaggtgttggtgatacattataaaatctgatagacctctgtaatccaacggtctctttttttagaggattaaaattatcaaaattggatca 26364848  T
Q  137 aattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaaggaccagcatatcaa 236  Q
    |||||||||||| |||||||| || |||  ||||||||||| ||||||||||||||||||||||||||        |||||||| ||||| ||| |||||    
T  26364847 aattgaataaaagaaataagttaaaggatgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggaccggcagatcaa 26364748  T
Q  237 ttaagcca 244  Q
    ||||||||    
T  26364747 ttaagcca 26364740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 25 - 243
Target Start/End: Complemental strand, 41637049 - 41636831
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| ||||||||||||||||||||||||||||  |||||||||||||||| | |||||||||| |||||        ||||||||||||||||     
T  41637049 agaagaagaaagtaaataaattaggtgttggtgatacacgataaaatctgatagacttccgtaatccaacggtctctttttttaggggattaaaattata 41636950  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaagga 224  Q
    |||||||||||||||||||||||| |||||| | ||||||| ||||| ||||| |||||||||||| |||||||||||||        ||||| ||||||    
T  41636949 aaagttggaccaaattgaataaaagaaataaattaagggacgtgttttagaaagttaagacttatgggaccaaattgaatgaaagaaataagtaaaagga 41636850  T
Q  225 ccagcatatcaattaagcc 243  Q
    || ||| ||||||||||||    
T  41636849 ccggcaaatcaattaagcc 41636831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 25 - 204
Target Start/End: Original strand, 521997 - 522176
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| ||||||||||||||| |||||||||||| |||||||| |||||||||| ||||||||||  ||||        |||||||||||||||||    
T  521997 agaagaagaaagtaaataaattaggggttggtgatacactataaaatttgatagacctccgtaatccaacagtctctttttctaggggattaaaattatc 522096  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||| || || ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||  ||||||||||||    
T  522097 aaaattagatcaaattgaataaaataaataagttaagggacatgtttgagaaagttaagacttatggaaccaaattgaat 522176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 25 - 204
Target Start/End: Original strand, 9245331 - 9245510
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||  | ||||||| |||||        ||||||||||||||||     
T  9245331 agaagaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagacctcagcaatccaacggtctctttttttaggggattaaaattata 9245430  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||| |||||| |||||||||||||||||||| | ||||||| ||||||||||| |||||||||||| |||||||||||||    
T  9245431 aaaattggactaaattgaataaaataaataaattaagggacgtgtttgagaaagttaagacttatgggaccaaattgaat 9245510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 25 - 240
Target Start/End: Complemental strand, 30641015 - 30640801
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||| |||||        ||||||||||||||||     
T  30641015 agaagaagaaagtaaataaattaggtgttggtgatacactataaaatttgatagacctccgtaatccaacggtctctttttttaggggattaaaattatt 30640916  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaagga 224  Q
    ||| ||||| |||||||||||||| |||||||| ||  ||| ||||||| ||  |||| ||||||| |||||||||||||        ||||||||||||    
T  30640915 aaaattggatcaaattgaataaaagaaataagttaa-tgacgtgtttgataaggttaaaacttatgggaccaaattgaataaaagaaataagttaaagga 30640817  T
Q  225 ccagcatatcaattaa 240  Q
    || |||||||||||||    
T  30640816 ccggcatatcaattaa 30640801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 42 - 245
Target Start/End: Original strand, 41638070 - 41638272
Alignment:
Q  42 aaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggaccaaattg 141  Q
    ||||||||||||||||||||| |||||||  ||||||||||  |||||||||| ||||        |||||||||||||||| ||| |||||||||||||    
T  41638070 aaattaggtgttggtgatacactataaaacatgatagacctctgtaatccaattgtct-cttttttaggggattaaaattattaaaattggaccaaattg 41638168  T
Q  142 aataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaaggaccagcatatcaattaag 241  Q
    ||||||| |||||||| || |||||||||||||||| |||||||||||||||  |||||||||        |||||||| ||||| ||| ||||||||||    
T  41638169 aataaaagaaataagttaaaggacatgtttgagaaagttaagacttatgagaataaattgaataaaagaaataagttaagggaccggcagatcaattaag 41638268  T
Q  242 ccat 245  Q
    ||||    
T  41638269 ccat 41638272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 25 - 204
Target Start/End: Complemental strand, 43584626 - 43584447
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| ||||||||||||||   ||||||||||||||||||||||||||||| || ||||||||| |||||        |   |||||||||||||    
T  43584626 agaagaagaaagtaaataaattagacattggtgatacattataaaatctgatagacttttgtaatccaacggtctctttttttaaaagattaaaattatc 43584527  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||| ||||| |||||||||||||| |||||||| ||||||| ||||||||||| ||||||||||||||| ||||||||||    
T  43584526 aaaattggatcaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgagatcaaattgaat 43584447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 25 - 245
Target Start/End: Original strand, 26366094 - 26366314
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| ||||||||||||| |||||||||||||| |||||||||| |||||||| ||||||| || |||||        ||||||||||||||||     
T  26366094 agaagaagaaagtaaataaattatgtgttggtgatacactataaaatctaatagacctccgtaatctaacggtctttttttttaggggattaaaattatt 26366193  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaagga 224  Q
    |||  ||||||||||||||||||| |||||||| | || |||||||||| ||  ||||||||||||| |||||||| |||        ||||||||||||    
T  26366194 aaaaatggaccaaattgaataaaagaaataagttatggaacatgtttgataaggttaagacttatgaaaccaaattaaataaaagaaataagttaaagga 26366293  T
Q  225 ccagcatatcaattaagccat 245  Q
     | ||| ||||||||||||||    
T  26366294 tcggcagatcaattaagccat 26366314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 37 - 200
Target Start/End: Original strand, 30644617 - 30644779
Alignment:
Q  37 taaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggacca 136  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||| |||||        || ||||||||||||||||| ||||| ||    
T  30644617 taaataaattaggtgttggtgatccattataaaatttgatagacctccgtaatccaacggtct-cttttttagaggattaaaattatcaaaattggatca 30644715  T
Q  137 aattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaatt 200  Q
    |||||||||||| |||||||| ||| ||| ||||||||||| |||||| ||||| |||||||||    
T  30644716 aattgaataaaagaaataagttaagagacgtgtttgagaaagttaagatttatgggaccaaatt 30644779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 25 - 243
Target Start/End: Complemental strand, 20309141 - 20308923
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||||||| ||||||||||| |||||||||||||||||||  || |||||| |||||        ||||||| |||||||||    
T  20309141 agaagaagaaagtaaataaattaggtattggtgatacactataaaatctgatagacctcagtgatccaacggtctctttttctaggggatcaaaattatc 20309042  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaagga 224  Q
    ||| ||||||||||||||||||||  ||||| | ||||||| ||||||||||| |||| ||||||| |||  ||||||||        |||||||| |||    
T  20309041 aaaattggaccaaattgaataaaaacaataaattaagggacgtgtttgagaaagttaaaacttatgggactcaattgaataaaagaaataagttaaggga 20308942  T
Q  225 ccagcatatcaattaagcc 243  Q
    || ||| ||||||||||||    
T  20308941 ccggcagatcaattaagcc 20308923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 35 - 204
Target Start/End: Original strand, 20309961 - 20310131
Alignment:
Q  35 agtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnn-aggggattaaaattatcaaagttgga 133  Q
    ||||||||| |||||||| ||||||||| |||||||||||| |||||||| |||||||| |||||         | |||||||||||||||||| ||| |    
T  20309961 agtaaataagttaggtgtaggtgatacactataaaatctgacagaccttcataatccaacggtcttttttttctaagggattaaaattatcaaaattgaa 20310060  T
Q  134 ccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    |||||| |||||||| |||||||| ||||||| ||||||||||| |||||||||||||||||||| |||||    
T  20310061 ccaaatcgaataaaagaaataagttaagggacgtgtttgagaaacttaagacttatgagaccaaaatgaat 20310131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 25 - 243
Target Start/End: Complemental strand, 21095774 - 21095556
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||||||| ||||||||||| |||||||||||||||||||  || |||||| |||||        ||||||| |||||||||    
T  21095774 agaagaagaaagtaaataaattaggtattggtgatacactataaaatctgatagacctcagtgatccaacggtctctttttctaggggatcaaaattatc 21095675  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaagga 224  Q
    ||| ||||||||||||||||||||  ||||| | ||||||| ||||||||||| |||| ||||||| |||  ||||||||        |||||||| |||    
T  21095674 aaaattggaccaaattgaataaaaacaataaattaagggacgtgtttgagaaagttaaaacttatgggactcaattgaataaaagaaataagttaaggga 21095575  T
Q  225 ccagcatatcaattaagcc 243  Q
    || ||| ||||||||||||    
T  21095574 ccggcagatcaattaagcc 21095556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 35 - 204
Target Start/End: Original strand, 21096594 - 21096764
Alignment:
Q  35 agtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnn-aggggattaaaattatcaaagttgga 133  Q
    ||||||||| |||||||| ||||||||| |||||||||||| |||||||| |||||||| |||||         | |||||||||||||||||| ||| |    
T  21096594 agtaaataagttaggtgtaggtgatacactataaaatctgacagaccttcataatccaacggtcttttttttctaagggattaaaattatcaaaattgaa 21096693  T
Q  134 ccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    |||||| |||||||| |||||||| ||||||| ||||||||||| |||||||||||||||||||| |||||    
T  21096694 ccaaatcgaataaaagaaataagttaagggacgtgtttgagaaacttaagacttatgagaccaaaatgaat 21096764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 35 - 204
Target Start/End: Complemental strand, 34642872 - 34642704
Alignment:
Q  35 agtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggac 134  Q
    |||||||||||||| ||||||||||| | ||||||||||||||||||| || ||||||| ||| |        |||||||||||||||||||| ||  ||    
T  34642872 agtaaataaattagatgttggtgatatactataaaatctgatagacctccgcaatccaacggttt-tttttttaggggattaaaattatcaaaattaaac 34642774  T
Q  135 caaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    |||||||||||||| |||||||| ||||||| ||||||||||| |||||||||||  |||||||||||||    
T  34642773 caaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatatgaccaaattgaat 34642704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 200
Target Start/End: Original strand, 43585857 - 43586019
Alignment:
Q  37 taaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggacca 136  Q
    |||||||||||||| ||| ||||||| |||||||| || ||||||||| ||||||||||||||        | || ||||||||||| ||| ||||| ||    
T  43585857 taaataaattaggtattgatgatacactataaaatatggtagaccttcataatccaatggtcttttttttaaagg-attaaaattattaaaattggatca 43585955  T
Q  137 aattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaatt 200  Q
    |||||||||||  |||||| | ||  ||||||||||||||||||||||||||||||| ||||||    
T  43585956 aattgaataaatgaaataatttaatagacatgtttgagaaaattaagacttatgagatcaaatt 43586019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 31203123 - 31203071
Alignment:
Q  35 agtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgta 87  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||| ||||    
T  31203123 agtaaataagttaggtgttggtgatacattataaaatttgatagacctccgta 31203071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 204
Target Start/End: Original strand, 34643878 - 34644038
Alignment:
Q  38 aaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggaccaa 137  Q
    ||||||||||||||||||||||||   ||||||||||||||||||    ||||||| |||||        |||||||||||||||||||| ||| || ||    
T  34643878 aaataaattaggtgttggtgatacgccataaaatctgatagacct---caatccaacggtct--ttttttaggggattaaaattatcaaaattgaactaa 34643972  T
Q  138 attgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||| ||||||| |||||| | ||  ||  ||||||||||| |||||| ||||| || ||||||||||    
T  34643973 attaaataaaagaaataaattaatagaggtgtttgagaaagttaagatttatggga-caaattgaat 34644038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 22012355 - 22012298
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagacct 82  Q
    ||||| ||| ||||||||||| |||||||||||||||| ||||||||||| |||||||    
T  22012355 agaagaagaaagtaaataaatcaggtgttggtgatacactataaaatctggtagacct 22012298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 82
Target Start/End: Original strand, 22013169 - 22013216
Alignment:
Q  35 agtaaataaattaggtgttggtgatacattataaaatctgatagacct 82  Q
    ||||||||||| |||||||||||||||| ||||||||||| |||||||    
T  22013169 agtaaataaatcaggtgttggtgatacactataaaatctggtagacct 22013216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 204
Target Start/End: Complemental strand, 31203068 - 31203005
Alignment:
Q  141 gaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    |||||||| |||||||| ||||||| ||||||||||| |||||| ||||| ||||||| |||||    
T  31203068 gaataaaagaaataagttaagggacgtgtttgagaaacttaagatttatgggaccaaaatgaat 31203005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 82
Target Start/End: Original strand, 43133978 - 43134025
Alignment:
Q  35 agtaaataaattaggtgttggtgatacattataaaatctgatagacct 82  Q
    ||||||||||| | |||||||||||||| ||||||||||| |||||||    
T  43133978 agtaaataaatcaagtgttggtgatacactataaaatctggtagacct 43134025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 3714449 - 3714493
Alignment:
Q  35 agtaaataaattaggtgttggtgatacattataaaatctgataga 79  Q
    ||||||||||| | |||||||||||||| ||||| ||||||||||    
T  3714449 agtaaataaatcaagtgttggtgatacactataagatctgataga 3714493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 102; Significance: 1e-50; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 42 - 204
Target Start/End: Original strand, 50484913 - 50485075
Alignment:
Q  42 aaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggaccaaattg 141  Q
    ||||||||||||||||||||| | |||||||||||||||||  |||||||||||||||        |||||||||||||||||||| |||||||||||||    
T  50484913 aaattaggtgttggtgatacactgtaaaatctgatagacctatgtaatccaatggtctctttttttaggggattaaaattatcaaaattggaccaaattg 50485012  T
Q  142 aataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||||||| |||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||    
T  50485013 aataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaat 50485075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 35 - 244
Target Start/End: Complemental strand, 51468547 - 51468338
Alignment:
Q  35 agtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggac 134  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||    |||        |||||||||||||||| ||| ||||||    
T  51468547 agtaaataaattgggtgttggtgatacactataaaatctgatagacctccgtaatccatcaatctttttttttaggggattaaaattattaaaattggac 51468448  T
Q  135 caaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaaggaccagcatatc 234  Q
    |||||||||||||| |||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||        |||||||| ||||| ||| |||    
T  51468447 caaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaaaaaataagttaagggaccggcagatc 51468348  T
Q  235 aattaagcca 244  Q
    ||||||||||    
T  51468347 aattaagcca 51468338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 25 - 204
Target Start/End: Original strand, 7111375 - 7111554
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||| |||||        |||||||||||||||||    
T  7111375 agaagaagaaagtaaataaattaggtgttgatgatacactataaaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattatc 7111474  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||| |||||||||||||||||||| |||| ||| || |||| ||||||||||| |||||||||||  |||||||||||||    
T  7111475 aaaattggaccaaattgaataaaagaaatcagttaatggacgtgtttgagaaagttaagacttataggaccaaattgaat 7111554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 25 - 204
Target Start/End: Complemental strand, 17244393 - 17244214
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||| |||||        ||| |||||||||||||    
T  17244393 agaagaagaaagtaaataaattaggtatcggtgatacattataaaatctgatagacctccgtaatccaacggtctctttttttaggagattaaaattatc 17244294  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||| |||||||||||||||| ||| |||||||| ||||||| ||||||||||| || ||||||||| |||||||||||||    
T  17244293 aaaattggaccaaattgaatcaaagaaataagttaagggacgtgtttgagaaagttgagacttatgggaccaaattgaat 17244214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 25 - 204
Target Start/End: Complemental strand, 51693365 - 51693186
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||| |||||        |||| ||||||||||||    
T  51693365 agaagaagaaagtaaataaattaggtgttggtgatacactataaaatccgatagacctccgtaatccaacggtctctttttttagggtattaaaattatc 51693266  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||| ||| |||||||||||||||| |||||||| || |||| ||||||||||| |||||||||||| |||||||||||||    
T  51693265 aaaattgaaccaaattgaataaaagaaataagttaaaggacgtgtttgagaaagttaagacttatgggaccaaattgaat 51693186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 37 - 204
Target Start/End: Original strand, 45229515 - 45229682
Alignment:
Q  37 taaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggacca 136  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||   |||        |  ||||||||||||||||| ||||| ||    
T  45229515 taaataaattaggtgttggtgatccattataaaatctgatagacctccgtaatccaacaatctttttttttataggattaaaattatcaaaattggatca 45229614  T
Q  137 aattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    |||||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||||||||||||    
T  45229615 aattgaataaaagaaataagttaagggacgtgtttgagaaaattaagatttatgagaccaaattgaat 45229682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 38 - 204
Target Start/End: Original strand, 5488780 - 5488946
Alignment:
Q  38 aaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggaccaa 137  Q
    ||||||||||||||||||||||||| |||||||| |||||||||| |||||||||| |||||        | |||||||||||||||||| |||||||||    
T  5488780 aaataaattaggtgttggtgatacactataaaatttgatagacctccgtaatccaacggtctctttttctaagggattaaaattatcaaaattggaccaa 5488879  T
Q  138 attgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||||||||||| |||||||| || | || ||||||||||| |||||||||||| ||| |||||||||    
T  5488880 attgaataaaagaaataagttaatgaacgtgtttgagaaagttaagacttatgggactaaattgaat 5488946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 25 - 200
Target Start/End: Complemental strand, 7110444 - 7110269
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| ||||||||||||||| |||| ||||||| ||||||||||||||||||| || ||||||| | |||        |||||||||||||||||    
T  7110444 agaagaagaaagtaaataaattaggcgttgatgatacactataaaatctgatagacctccgcaatccaacgatctctttttttaggggattaaaattatc 7110345  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaatt 200  Q
    ||| |||||||||||||||||||| |||| ||| ||||||| ||||||||||| |||||||||||  |||||||||    
T  7110344 aaaattggaccaaattgaataaaagaaatcagttaagggacgtgtttgagaaagttaagacttataggaccaaatt 7110269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 35 - 243
Target Start/End: Complemental strand, 52086833 - 52086627
Alignment:
Q  35 agtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggac 134  Q
    |||||| |||||||||| |||||||||| |||||||| | ||||||||||||||||||| ||| |        |||||||||||||||| ||| ||||||    
T  52086833 agtaaaaaaattaggtgatggtgatacactataaaattttatagaccttcgtaatccaacggttt--ttttttaggggattaaaattattaaaattggac 52086736  T
Q  135 caaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaaggaccagcatatc 234  Q
     ||||||||||||| |||||||| ||||||| ||||||||||| |||| ||||||| |||||||||||||        |||||||| ||||| ||| |||    
T  52086735 taaattgaataaaagaaataagttaagggacgtgtttgagaaagttaaaacttatgggaccaaattgaataaaagaaataagttaagggaccggcagatc 52086636  T
Q  235 aattaagcc 243  Q
    |||||||||    
T  52086635 aattaagcc 52086627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 45 - 204
Target Start/End: Complemental strand, 40187800 - 40187642
Alignment:
Q  45 ttaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggaccaaattgaat 144  Q
    ||||||||||||||||||  |||||||||||||||||| |||||||||| |||||        |||||||||||||||| ||| |||||||||||||| |    
T  40187800 ttaggtgttggtgatacacgataaaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattataaaaattggaccaaattgagt 40187701  T
Q  145 aaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    |||| |||||||| || |||||||||||| ||| |||||||||||| |||||||||||||    
T  40187700 aaaagaaataagttaa-ggacatgtttgataaagttaagacttatgggaccaaattgaat 40187642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 25 - 200
Target Start/End: Complemental strand, 52759581 - 52759406
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||  ||||| ||| |||||        | | |||||||||||||    
T  52759581 agaagaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagacctctgtaattcaacggtctcattttttaagagattaaaattatc 52759482  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaatt 200  Q
    ||| |||||| ||||||||||||||| |||||| || |||| | ||||||||| ||||||||||||| ||||||||    
T  52759481 aaaattggactaaattgaataaaatagataagttaatggacgtttttgagaaagttaagacttatgaaaccaaatt 52759406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 44 - 243
Target Start/End: Original strand, 1823215 - 1823410
Alignment:
Q  44 attaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggaccaaattgaa 143  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||       ||  |||||||||||||||| ||||| |||||||||    
T  1823215 attaggtgttggtgatacactataaaatctgatagaccttcgtaatccaacggtttatctttttagaagattaaaattatcaaaattggatcaaattgaa 1823314  T
Q  144 taaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaaggaccagcatatcaattaagcc 243  Q
    ||||| |||||||| ||| ||||||||||||   ||||||||||||| ||| |||||||||        |||||||| ||||| ||| ||||||||||||    
T  1823315 taaaa-aaataagttaagcgacatgtttgag---attaagacttatgtgactaaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 1823410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 25 - 162
Target Start/End: Original strand, 52761496 - 52761633
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||| |||||        |||||||||||||||||    
T  52761496 agaaggagaaagtaaataaattaggtgttggtgatacactataaaatctgatagacctccgcaatccaacggtctcttttttcaggggattaaaattatc 52761595  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagg 162  Q
    ||| |||||||||||||||||||| |||||||| ||||    
T  52761596 aaaattggaccaaattgaataaaagaaataagttaagg 52761633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 25 - 204
Target Start/End: Original strand, 51468801 - 51468980
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||||||||||||||||||| | |||||||| ||||| || |||||||||||| | |        ||||||||||||||||     
T  51468801 agaagaagaaagtaaataaattaggtgttggtgatacactgtaaaatctaatagatctccgtaatccaatgctttttttttttaggggattaaaattatt 51468900  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||| ||||||||||||||||| || ||||||||  |||||| ||||||| ||| |||||| ||||| |||||||||||||    
T  51468901 aaaattggaccaaattgaatagaagaaataagtttagggacgtgtttgaaaaagttaagatttatgggaccaaattgaat 51468980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 42 - 204
Target Start/End: Complemental strand, 5488702 - 5488540
Alignment:
Q  42 aaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggaccaaattg 141  Q
    |||||| |||||||||||||| ||||||||||||||||||| |||||||||| |||||        | |||||||||||||||||| ||||| |||||||    
T  5488702 aaattacgtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctctttttctaagggattaaaattatcaaaattggatcaaattg 5488603  T
Q  142 aataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||||||| |||||||| || |||| ||||||||||| ||||| ||||||  | ||||||||||    
T  5488602 aataaaagaaataagttaaaggacgtgtttgagaaagttaagtcttatggaatcaaattgaat 5488540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 45 - 204
Target Start/End: Complemental strand, 18819460 - 18819301
Alignment:
Q  45 ttaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggaccaaattgaat 144  Q
    |||||||||||||||||| |||||||||||||| |||| |||||||||| ||| |        |||||||||||||||| ||| |||| |||||||||||    
T  18819460 ttaggtgttggtgatacactataaaatctgatatacctccgtaatccaacggtttcttttcataggggattaaaattattaaaattgggccaaattgaat 18819361  T
Q  145 aaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    |||| |||||| | ||||||| || |||||||| |||||||||||| || ||||||||||    
T  18819360 aaaagaaataaattaagggacgtgattgagaaagttaagacttatgggatcaaattgaat 18819301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 25 - 204
Target Start/End: Original strand, 38235050 - 38235228
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||||||||||||||||||| | |||||||| |||||| |||||||||||| ||| |         ||| |||||| ||||     
T  38235050 agaagaagaaagtaaataaattaggtgttggtgatacactgtaaaatcttatagacattcgtaatccaacggtttgttttttttggg-attaaacttatt 38235148  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||| |||||||||||| ||||||| |||||||| ||||||| ||||||||||| |||||||||||  |||||||||||||    
T  38235149 aaaattggaccaaatttaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatatgaccaaattgaat 38235228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 37 - 204
Target Start/End: Original strand, 52087686 - 52087853
Alignment:
Q  37 taaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggacca 136  Q
    |||||||||||| |||||||||||||   |||||| |||||||||| |||||| ||| |||||        |||||| ||||||||||||| ||| | ||    
T  52087686 taaataaattagatgttggtgatacaccgtaaaatttgatagacctccgtaattcaacggtctctttttttaggggactaaaattatcaaaattgaatca 52087785  T
Q  137 aattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    |||||||||||| |||||||| || |||| ||||||||||| ||||||| ||||||||||||||||||    
T  52087786 aattgaataaaagaaataagtgaaaggacgtgtttgagaaagttaagacatatgagaccaaattgaat 52087853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 26 - 204
Target Start/End: Complemental strand, 50483727 - 50483549
Alignment:
Q  26 gaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnn-aggggattaaaattatc 124  Q
    |||| ||| |||||||||||||||||||||| |||||  |||||||||| ||||| | ||||||||||  ||||         |||||| |||||||||     
T  50483727 gaagaagaaagtaaataaattaggtgttggttatacacgataaaatctg-tagacttccgtaatccaacagtctcttttttttaggggagtaaaattata 50483629  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||| |||||||||||||||||||| |||||| | ||  ||| | ||| ||||||||||||||||||||||||||||||||    
T  50483628 aaaattggaccaaattgaataaaagaaataaattaaatgacgtttttaagaaaattaagacttatgagaccaaattgaat 50483549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 111 - 204
Target Start/End: Original strand, 17245651 - 17245743
Alignment:
Q  111 ggattaaaattatcaaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    |||||||||| |||||| |||||||||||| ||||||| |||||||| ||||||| ||||||||| | ||||||||||||||||||||||||||    
T  17245651 ggattaaaatgatcaaaattggaccaaatttaataaaa-aaataagttaagggacttgtttgagagagttaagacttatgagaccaaattgaat 17245743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 25 - 157
Target Start/End: Complemental strand, 45228493 - 45228361
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| ||||||||||||| | ||| |||||||| |||||||| ||||||| || |||||||||| |||||        ||||||||||||||||     
T  45228493 agaagaagaaagtaaataaattaagcgtttgtgatacactataaaatttgatagatctccgtaatccaacggtctctttttttaggggattaaaattatt 45228394  T
Q  125 aaagttggaccaaattgaataaaataaataagt 157  Q
    ||| |||||||||||||||||||| ||||||||    
T  45228393 aaaattggaccaaattgaataaaagaaataagt 45228361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 38 - 204
Target Start/End: Complemental strand, 1822114 - 1821947
Alignment:
Q  38 aaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggaccaa 137  Q
    ||||||||||||||||  ||||||| ||||||||| ||||||||||||||| |||| |||||        |  ||||||||||||||||| || ||| ||    
T  1822114 aaataaattaggtgttaatgatacactataaaatcagatagaccttcgtaacccaacggtctctttttttaaaggattaaaattatcaaaattagactaa 1822015  T
Q  138 attgaat-aaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||| ||| |||| |||||||| ||||||| ||||||||||| |||| | ||||  ||| |||||||||    
T  1822014 attaaataaaaaaaaataagttaagggacgtgtttgagaaagttaaaatttataggacaaaattgaat 1821947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 35 - 99
Target Start/End: Complemental strand, 21203219 - 21203155
Alignment:
Q  35 agtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtct 99  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||| |||||    
T  21203219 agtaaataaattaggtgttgatgatacactataaaatctgatagacctttgtaatccaacggtct 21203155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 49 - 204
Target Start/End: Complemental strand, 47533150 - 47532996
Alignment:
Q  49 gtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggaccaaattgaataaaa 148  Q
    |||||||||||||||||||||||||||||||| | | |||| |||  ||||        ||  |||||||||||||||| ||| | |||||||||||||     
T  47533150 gtgttggtgatacattataaaatctgatagacttccataattcaacagtct-gttttttagaagattaaaattatcaaaattgaatcaaattgaataaat 47533052  T
Q  149 taaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
     |||||| | |||| || ||||||| ||| |||||| |||||||||||||||||||    
T  47533051 gaaataatttaaggaacgtgtttgataaagttaagatttatgagaccaaattgaat 47532996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 47533764 - 47533808
Alignment:
Q  35 agtaaataaattaggtgttggtgatacattataaaatctgataga 79  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  47533764 agtaaataaattaggtgttggtgatacactataaaatctgataga 47533808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 150 - 242
Target Start/End: Complemental strand, 25181594 - 25181502
Alignment:
Q  150 aaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaaggaccagcatatcaattaagc 242  Q
    |||||||| ||||||| ||||||||||| |||||||||||  |||||||||||||        |||||||| ||||| ||| |||||||||||    
T  25181594 aaataagttaagggacgtgtttgagaaagttaagacttataggaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagc 25181502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 42 - 243
Target Start/End: Complemental strand, 31234 - 31033
Alignment:
Q  42 aaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggaccaaattg 141  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||        |||||||||||||||| |||  ||||||||||||    
T  31234 aaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctgtttttttaggggattaaaattataaaaactggaccaaattg 31135  T
Q  142 aataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaaggaccagcatatcaattaag 241  Q
    | ||||| ||||||||  |||||| ||||||||||| ||||||||||||||||||||||||||        |||||||| ||||| ||| ||||||||||    
T  31134 agtaaaagaaataagttgagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggaccggcagatcaattaag 31035  T
Q  242 cc 243  Q
    ||    
T  31034 cc 31033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 42 - 204
Target Start/End: Original strand, 35202 - 35364
Alignment:
Q  42 aaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggaccaaattg 141  Q
    ||||||||||||||||||||| | ||||||||||||||||| |||||||||| |||||        |||||||||||||||| ||| |||||||||||||    
T  35202 aaattaggtgttggtgatacactgtaaaatctgatagacctccgtaatccaacggtctgtttttttaggggattaaaattataaaaattggaccaaattg 35301  T
Q  142 aataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    | ||||| ||||||||  |||||| ||||||||||| |||||||||||| |||||||||||||    
T  35302 agtaaaagaaataagttgagggacgtgtttgagaaagttaagacttatgggaccaaattgaat 35364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 42 - 243
Target Start/End: Original strand, 83578 - 83779
Alignment:
Q  42 aaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggaccaaattg 141  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||        |||||||||||||||| |||  ||||||||||||    
T  83578 aaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctgtttttttaggggattaaaattataaaaactggaccaaattg 83677  T
Q  142 aataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaaggaccagcatatcaattaag 241  Q
    | ||||| ||||||||  |||||| ||||||||||| ||||||||||||||||||||||||||        |||||||| ||||| ||| ||||||||||    
T  83678 agtaaaagaaataagttgagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggaccggcagatcaattaag 83777  T
Q  242 cc 243  Q
    ||    
T  83778 cc 83779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 42 - 204
Target Start/End: Complemental strand, 79610 - 79448
Alignment:
Q  42 aaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggaccaaattg 141  Q
    ||||||||||||||||||||| | ||||||||||||||||| |||||||||| |||||        |||||||||||||||| ||| |||||||||||||    
T  79610 aaattaggtgttggtgatacactgtaaaatctgatagacctccgtaatccaacggtctgtttttttaggggattaaaattataaaaattggaccaaattg 79511  T
Q  142 aataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    | ||||| ||||||||  |||||| ||||||||||| |||||||||||| |||||||||||||    
T  79510 agtaaaagaaataagttgagggacgtgtttgagaaagttaagacttatgggaccaaattgaat 79448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 92; Significance: 9e-45; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 35 - 243
Target Start/End: Original strand, 27892246 - 27892454
Alignment:
Q  35 agtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggac 134  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||            |||||||||||||||| |||||     
T  27892246 agtaaataaattaggtgttggtgatacactataaaatctgatagaccttcgtaatctaacggtctgtttttttttttgattaaaattatcaaaattggat 27892345  T
Q  135 caaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaaggaccagcatatc 234  Q
    |||||||||||||| |||||||| ||||||| ||| ||||||| ||||||||||||||||||||||||||        |||||||| ||||| ||| |||    
T  27892346 caaattgaataaaagaaataagttaagggacgtgtctgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggaccggcagatc 27892445  T
Q  235 aattaagcc 243  Q
    |||||||||    
T  27892446 aattaagcc 27892454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 25 - 204
Target Start/End: Complemental strand, 16602943 - 16602764
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||||||||||||||||||| | ||||||||||||||| | |||||||||| |||||          |||||||||||||||    
T  16602943 agaagaagaaagtaaataaattaggtgttggtgatacactgtaaaatctgatagacatccgtaatccaacggtcttttttttttagggattaaaattatc 16602844  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||| ||||||||| || ||||||| |||||||| ||||||| ||||||||||| |||||||||||| |||||||||||||    
T  16602843 aaaattggaccaatttaaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggaccaaattgaat 16602764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 25 - 243
Target Start/End: Complemental strand, 27891324 - 27891106
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||||||||||||||||||| |  |||||||||||||| ||||||||| || |||||             ||||||||||||    
T  27891324 agaagaagaaagtaaataaattaggtgttggtgatacactggaaaatctgatagacattcgtaatctaacggtctgttttttttttttattaaaattatc 27891225  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaagga 224  Q
    ||| ||| |||||| ||||||||| |||||||| ||||||| ||||||||||| ||||||| ||||||||||||||||||        |||||||| |||    
T  27891224 aaaattgaaccaaaatgaataaaagaaataagttaagggacgtgtttgagaaagttaagacctatgagaccaaattgaataaaagaaataagttaaggga 27891125  T
Q  225 ccagcatatcaattaagcc 243  Q
    || ||| ||||||||||||    
T  27891124 ccggcagatcaattaagcc 27891106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 45 - 245
Target Start/End: Complemental strand, 23833165 - 23832966
Alignment:
Q  45 ttaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggaccaaattgaat 144  Q
    |||||||||| ||||||| ||||||||||  ||||||| |||||||||| |||||        |||||||||||||||||||| |||||| |||||||||    
T  23833165 ttaggtgttgatgatacactataaaatcttctagacctccgtaatccaacggtcttcttttttaggggattaaaattatcaaaattggactaaattgaat 23833066  T
Q  145 aaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaaggaccagcatatcaattaagcca 244  Q
    |||||||| |||| || |||| ||||||||||| |||||||||||| |||||||| ||||        |||||||| |||||  || |||||||||||||    
T  23833065 aaaataaaaaagttaa-ggacgtgtttgagaaagttaagacttatgggaccaaatggaataaaataaataagttaagggaccgacaaatcaattaagcca 23832967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 25 - 204
Target Start/End: Original strand, 38243855 - 38244034
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||| ||||||||| ||||| | |||||||| ||| ||||| |||||||||  || |        ||| |||||||||||||    
T  38243855 agaagaagaaagtaaataaatttggtgttggtaatacactgtaaaatcttatacacctttgtaatccaacagtatctttttttaggagattaaaattatc 38243954  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||| |||||||||||||||||||| |||||||| ||||||| ||||||| ||| |||||||||||| ||||||| |||||    
T  38243955 aaaattggaccaaattgaataaaagaaataagttaagggacgtgtttgaaaaagttaagacttatgggaccaaaatgaat 38244034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 66 - 204
Target Start/End: Complemental strand, 26388395 - 26388257
Alignment:
Q  66 taaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggaccaaattgaataaaataaataagtaaagggac 165  Q
    ||||||||||||||||| ||||||| || |||||        | |||||||||||||||||| ||| | |||||| ||||||| |||||||| || ||||    
T  26388395 taaaatctgatagacctccgtaatcaaacggtctttttttatatgggattaaaattatcaaaattgaatcaaattaaataaaagaaataagttaaaggac 26388296  T
Q  166 atgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
     ||||||||||| ||||||||||||||| ||||||||||    
T  26388295 gtgtttgagaaagttaagacttatgagatcaaattgaat 26388257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 35 - 182
Target Start/End: Complemental strand, 38243088 - 38242944
Alignment:
Q  35 agtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggac 134  Q
    |||||||||||| |||||||||||||||||||||||||| |||   ||| ||||||||| |||||        ||| |||||||||||||||| |||||     
T  38243088 agtaaataaatttggtgttggtgatacattataaaatcttata---ctttgtaatccaacggtctctttttttaggagattaaaattatcaaaattggat 38242992  T
Q  135 caaattgaataaaataaataagtaaagggacatgtttgagaaaattaa 182  Q
    |||||| ||||||| |||||||| ||| ||||||||||| ||| ||||    
T  38242991 caaattaaataaaagaaataagttaagagacatgtttgaaaaagttaa 38242944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 131 - 204
Target Start/End: Original strand, 16604195 - 16604268
Alignment:
Q  131 ggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    |||||||||||||||||| ||||||||  |||||| || |||||||| |||||||||||| |||||||||||||    
T  16604195 ggaccaaattgaataaaagaaataagttcagggacgtgcttgagaaacttaagacttatgggaccaaattgaat 16604268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 135 - 251
Target Start/End: Complemental strand, 43814629 - 43814513
Alignment:
Q  135 caaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaaggaccagcatatc 234  Q
    |||||||||||||| |||||||| || |||| | ||||||||| |||||||||||||||| |||||||||        |||||||| |||||  || |||    
T  43814629 caaattgaataaaagaaataagttaaaggacgtatttgagaaagttaagacttatgagacgaaattgaataaaagaaataagttaagggaccgacaaatc 43814530  T
Q  235 aattaagccattaattt 251  Q
    |||||||||| ||||||    
T  43814529 aattaagccaataattt 43814513  T

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Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 243
Target Start/End: Original strand, 23833898 - 23833988
Alignment:
Q  153 taagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaaggaccagcatatcaattaagcc 243  Q
    ||||| ||||||| ||||||||||| |||||||||||| || ||||||||||        |||||||| ||||| ||| ||||||||||||    
T  23833898 taagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 23833988  T

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Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 204
Target Start/End: Complemental strand, 15496129 - 15496084
Alignment:
Q  159 aagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||||||| |||||| |||| |||||||||||| |||||||||||||    
T  15496129 aagggacgtgtttgtgaaagttaagacttatgggaccaaattgaat 15496084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 5033667 - 5033623
Alignment:
Q  35 agtaaataaattaggtgttggtgatacattataaaatctgataga 79  Q
    |||||||||||||  ||||||||||||| ||||||||||| ||||    
T  5033667 agtaaataaattaaatgttggtgatacactataaaatctggtaga 5033623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 86; Significance: 3e-41; HSPs: 2)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 35 - 204
Target Start/End: Original strand, 2936 - 3106
Alignment:
Q  35 agtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnagg-ggattaaaattatcaaagttgga 133  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||            ||||||||||||||||| |||||    
T  2936 agtaaataaattaggtgttggtgatacactataaaatctgatagaccttcgtaatctaacggtctgtttttttttttggattaaaattatcaaaattgga 3035  T
Q  134 ccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||||||||||||||| |||||||| ||||||| ||| ||||||| |||||||||||| |||||||||||||    
T  3036 ccaaattgaataaaagaaataagttaagggacgtgtctgagaaagttaagacttatgggaccaaattgaat 3106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 25 - 165
Target Start/End: Complemental strand, 1986 - 1847
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||||||||||||||||||||||||| |  ||||||| |||||| ||||||||| || ||||||          |||||||||||||     
T  1986 agaagaagaaagtaaataaattaggtgttggtgatacactggaaaatctaatagacattcgtaatctaacggtctatattttttttggattaaaattat- 1888  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggac 165  Q
    ||| |||||||||||||||||||| |||||||| |||||||    
T  1887 aaaattggaccaaattgaataaaagaaataagttaagggac 1847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1425 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold1425
Description:

Target: scaffold1425; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 25 - 243
Target Start/End: Original strand, 1501 - 1719
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatc 124  Q
    ||||| ||| |||||| ||||||||||||||| |||||   |||||||||||||||||   |||||||| |||||        | |||||||||||||||    
T  1501 agaagaagaaagtaaaaaaattaggtgttggttatacaccgtaaaatctgatagacctctataatccaacggtctgtttttttaagggattaaaattatc 1600  T
Q  125 aaagttggaccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaatnnnnnnnntaagttaaagga 224  Q
    ||| |||||||||||||||||||  |||||| | || |||| ||||||||||| ||||||||||||  ||||||||||||        |||||||| |||    
T  1601 aaaattggaccaaattgaataaaggaaataaattaaaggacgtgtttgagaaagttaagacttatggaaccaaattgaataaaagaaataagttaaggga 1700  T
Q  225 ccagcatatcaattaagcc 243  Q
    || ||| ||||||||||||    
T  1701 ccggcagatcaattaagcc 1719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1425; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 42 - 204
Target Start/End: Complemental strand, 335 - 173
Alignment:
Q  42 aaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtctannnnnnnaggggattaaaattatcaaagttggaccaaattg 141  Q
    ||||||||||||||||||||  | |||||||||||||||||  ||||||||| |||||        | || ||||||||||||||| || ||||||||||    
T  335 aaattaggtgttggtgatacgctgtaaaatctgatagacctctgtaatccaacggtctctttttttaaggaattaaaattatcaaaatttgaccaaattg 236  T
Q  142 aataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||||||  |||||| | || |||| ||||||||||| |||||||||||| || ||||||||||    
T  235 aataaaggaaataaattaaaggacgtgtttgagaaagttaagacttatgggatcaaattgaat 173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 35 - 204
Target Start/End: Original strand, 25254 - 25424
Alignment:
Q  35 agtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtc-tannnnnnnaggggattaaaattatcaaagttgga 133  Q
    |||||||||||||||||||| | ||||| |||||||| ||||| |||| ||||||||||  ||| |        |   |||||||||||||||| |||||    
T  25254 agtaaataaattaggtgttgataatacactataaaatgtgataaacctccgtaatccaactgtcctcttgttttaaatgattaaaattatcaaaattgga 25353  T
Q  134 ccaaattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    ||||||| ||||||| |||||| | ||||||| ||||||||||| |||||||||||| |||||||||||||    
T  25354 ccaaatttaataaaagaaataaattaagggacgtgtttgagaaagttaagacttatgtgaccaaattgaat 25424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 9363 - 9301
Alignment:
Q  37 taaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaatggtct 99  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||    
T  9363 taaataaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtct 9301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 104469 - 104405
Alignment:
Q  25 agaagcagagagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaat 89  Q
    ||||| ||| |||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||    
T  104469 agaagaagaaagtaaataaattagatgttggtgatacactataaaatctgatagacctccgtaat 104405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 204
Target Start/End: Complemental strand, 104407 - 104340
Alignment:
Q  137 aattgaataaaataaataagtaaagggacatgtttgagaaaattaagacttatgagaccaaattgaat 204  Q
    |||||||||||| |||||||| ||||||| ||||||||||  |||| ||||||| |||||||||||||    
T  104407 aattgaataaaagaaataagttaagggacgtgtttgagaatgttaaaacttatgggaccaaattgaat 104340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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