View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8202_high_10 (Length: 298)
Name: NF8202_high_10
Description: NF8202
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8202_high_10 |
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Alignment Details
Target: chr6 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 23 - 285
Target Start/End: Original strand, 26317649 - 26317911
Alignment:
| Q |
23 |
atgaatgaatgaatgtttttaacagaatagttatttatatatctttgtgatggattagatgtgtcaagtactgaaaagtcagtcaaatataacatgaaat |
122 |
Q |
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| T |
26317649 |
atgaatgaatgaatgtttttaacagaatagttatttatatatctttgtgatggattagatgtgtcaagtactgaaaagtcagtcaaatataacatgaaag |
26317748 |
T |
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| Q |
123 |
atgacacaatataggaaattaaatccattgattgatggatacttcatggttttggttaaaggatgtgtctattcctaatattgaatgagactctacactg |
222 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26317749 |
atgacacaatataggaaattaaatccattgattgatggatacttcatggttttggttaaaggatgtgtctattcctaatattgaatgagactctacactg |
26317848 |
T |
|
| Q |
223 |
tgaatatttagcatagttttttgttccaattctttgattgtgacattttttctatttgtctct |
285 |
Q |
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|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
26317849 |
tgaatatttagcatagttttttgttccaattccttgattgtgacattttttctatttgtctct |
26317911 |
T |
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