View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8202_low_5 (Length: 523)

Name: NF8202_low_5
Description: NF8202
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8202_low_5
NF8202_low_5
[»] chr7 (41 HSPs)
chr7 (163-508)||(31271894-31272252)
chr7 (306-508)||(7505374-7505577)
chr7 (161-296)||(7505208-7505343)
chr7 (163-288)||(23025135-23025260)
chr7 (164-289)||(35709867-35709992)
chr7 (164-288)||(1873610-1873734)
chr7 (163-288)||(39494054-39494180)
chr7 (163-289)||(41200196-41200322)
chr7 (199-288)||(33604564-33604653)
chr7 (164-288)||(16526162-16526286)
chr7 (164-288)||(49112512-49112636)
chr7 (199-289)||(47381487-47381577)
chr7 (199-288)||(10993195-10993285)
chr7 (199-289)||(17511311-17511401)
chr7 (199-289)||(17541813-17541903)
chr7 (164-296)||(32795678-32795810)
chr7 (164-294)||(40685628-40685758)
chr7 (164-296)||(37471539-37471671)
chr7 (193-290)||(2621446-2621543)
chr7 (163-289)||(33889179-33889305)
chr7 (216-289)||(17475746-17475819)
chr7 (216-289)||(17577395-17577468)
chr7 (206-296)||(8613760-8613849)
chr7 (129-164)||(40842555-40842590)
chr7 (206-296)||(47761704-47761793)
chr7 (217-273)||(4266886-4266942)
chr7 (206-296)||(39560512-39560601)
chr7 (129-164)||(40717126-40717161)
chr7 (130-164)||(7807203-7807237)
chr7 (130-164)||(8792489-8792523)
chr7 (130-164)||(43657150-43657184)
chr7 (127-164)||(19426728-19426765)
chr7 (259-296)||(34182087-34182124)
chr7 (259-296)||(34202676-34202713)
chr7 (162-191)||(35528503-35528532)
chr7 (259-296)||(35710647-35710684)
chr7 (162-195)||(48137326-48137359)
chr7 (136-164)||(28597028-28597056)
chr7 (136-164)||(32154445-32154473)
chr7 (136-164)||(47424880-47424908)
chr7 (130-158)||(48522299-48522327)
[»] chr3 (44 HSPs)
chr3 (306-508)||(19975929-19976135)
chr3 (163-296)||(19975753-19975886)
chr3 (164-289)||(6888731-6888856)
chr3 (161-295)||(43735955-43736088)
chr3 (199-289)||(33983000-33983090)
chr3 (164-288)||(21075896-21076020)
chr3 (162-277)||(42854312-42854427)
chr3 (163-288)||(43746291-43746417)
chr3 (164-288)||(46311832-46311956)
chr3 (200-289)||(27969482-27969571)
chr3 (164-288)||(2868979-2869103)
chr3 (164-288)||(46219071-46219196)
chr3 (201-288)||(27877537-27877624)
chr3 (164-289)||(50737950-50738075)
chr3 (164-289)||(50774779-50774904)
chr3 (163-296)||(7910179-7910312)
chr3 (163-296)||(41933240-41933373)
chr3 (164-295)||(31412155-31412286)
chr3 (244-296)||(10267883-10267935)
chr3 (202-289)||(21389755-21389842)
chr3 (130-164)||(46003855-46003889)
chr3 (164-296)||(54313366-54313498)
chr3 (164-295)||(1694942-1695073)
chr3 (206-289)||(7399708-7399790)
chr3 (164-224)||(11486112-11486172)
chr3 (244-296)||(26823062-26823114)
chr3 (206-296)||(9301081-9301170)
chr3 (199-274)||(24310810-24310885)
chr3 (206-296)||(55423723-55423812)
chr3 (164-296)||(3994992-3995124)
chr3 (130-164)||(6126603-6126637)
chr3 (130-164)||(43169643-43169677)
chr3 (130-164)||(46473276-46473310)
chr3 (163-248)||(20510554-20510639)
chr3 (130-159)||(36318169-36318198)
chr3 (163-278)||(36638060-36638175)
chr3 (259-296)||(43088028-43088065)
chr3 (244-296)||(1842582-1842634)
chr3 (244-288)||(10804565-10804609)
chr3 (244-296)||(26898262-26898314)
chr3 (136-164)||(31249216-31249244)
chr3 (244-296)||(32774462-32774514)
chr3 (136-164)||(44695160-44695188)
chr3 (136-164)||(51650505-51650533)
[»] chr4 (51 HSPs)
chr4 (306-508)||(19240913-19241110)
chr4 (1-129)||(19553893-19554021)
chr4 (164-295)||(44341168-44341299)
chr4 (164-296)||(19240744-19240876)
chr4 (164-290)||(32594018-32594144)
chr4 (199-289)||(32767591-32767681)
chr4 (199-289)||(43286269-43286359)
chr4 (158-288)||(54134500-54134630)
chr4 (161-288)||(17543719-17543847)
chr4 (164-288)||(20034306-20034430)
chr4 (164-288)||(27869997-27870121)
chr4 (162-288)||(47295537-47295663)
chr4 (165-286)||(1705217-1705337)
chr4 (164-288)||(39345806-39345931)
chr4 (164-288)||(951348-951472)
chr4 (199-275)||(3415234-3415310)
chr4 (164-288)||(45522475-45522599)
chr4 (167-290)||(34859066-34859189)
chr4 (164-290)||(9455343-9455469)
chr4 (199-289)||(52464103-52464193)
chr4 (164-288)||(2323804-2323928)
chr4 (164-289)||(34030272-34030396)
chr4 (164-273)||(41361232-41361341)
chr4 (166-282)||(1324942-1325060)
chr4 (164-296)||(56264427-56264559)
chr4 (164-296)||(40731225-40731357)
chr4 (170-296)||(1139012-1139138)
chr4 (164-223)||(16029724-16029783)
chr4 (238-289)||(51401349-51401400)
chr4 (164-296)||(401381-401513)
chr4 (216-296)||(15194495-15194575)
chr4 (244-296)||(39240448-39240500)
chr4 (244-296)||(51435598-51435650)
chr4 (129-164)||(1580170-1580205)
chr4 (206-296)||(26706931-26707020)
chr4 (129-164)||(30042281-30042316)
chr4 (206-296)||(35666590-35666679)
chr4 (199-272)||(50004746-50004818)
chr4 (206-288)||(53724870-53724951)
chr4 (130-164)||(22257085-22257119)
chr4 (130-164)||(31240797-31240831)
chr4 (130-164)||(36792481-36792515)
chr4 (378-416)||(51204242-51204280)
chr4 (242-287)||(16029783-16029828)
chr4 (260-297)||(32594851-32594888)
chr4 (244-289)||(39809649-39809694)
chr4 (164-261)||(54787555-54787652)
chr4 (244-296)||(6643317-6643369)
chr4 (244-296)||(16623506-16623558)
chr4 (130-158)||(48791489-48791517)
chr4 (244-296)||(54094010-54094062)
[»] chr6 (28 HSPs)
chr6 (306-483)||(27966550-27966722)
chr6 (164-289)||(20139188-20139313)
chr6 (164-289)||(22193556-22193681)
chr6 (163-296)||(27966754-27966887)
chr6 (162-279)||(12272226-12272343)
chr6 (164-288)||(11369587-11369712)
chr6 (164-288)||(15065901-15066025)
chr6 (199-287)||(31472498-31472586)
chr6 (164-296)||(31655531-31655663)
chr6 (164-288)||(10997714-10997838)
chr6 (201-279)||(3044290-3044368)
chr6 (436-508)||(27966477-27966549)
chr6 (199-289)||(12076650-12076739)
chr6 (159-296)||(26555232-26555373)
chr6 (170-289)||(32465657-32465776)
chr6 (160-296)||(15068035-15068171)
chr6 (161-296)||(34178400-34178535)
chr6 (166-296)||(29641060-29641190)
chr6 (166-296)||(31511239-31511369)
chr6 (163-288)||(2703019-2703144)
chr6 (164-296)||(17547462-17547594)
chr6 (212-289)||(17869271-17869348)
chr6 (206-296)||(2067151-2067240)
chr6 (244-296)||(4170949-4171001)
chr6 (212-279)||(17879033-17879100)
chr6 (216-296)||(9035114-9035194)
chr6 (259-296)||(22988185-22988222)
chr6 (259-296)||(23800174-23800211)
[»] chr8 (37 HSPs)
chr8 (164-290)||(2349667-2349792)
chr8 (162-290)||(15243745-15243873)
chr8 (199-289)||(42739369-42739459)
chr8 (164-288)||(30436472-30436597)
chr8 (164-288)||(35813441-35813566)
chr8 (167-290)||(28968170-28968293)
chr8 (164-295)||(9201084-9201214)
chr8 (164-288)||(3654313-3654437)
chr8 (200-287)||(3940680-3940767)
chr8 (164-296)||(5927043-5927175)
chr8 (163-295)||(6142867-6143000)
chr8 (164-296)||(6266236-6266368)
chr8 (164-296)||(31894956-31895087)
chr8 (164-296)||(24101769-24101901)
chr8 (164-296)||(38231749-38231880)
chr8 (207-296)||(45451769-45451859)
chr8 (206-296)||(26098281-26098370)
chr8 (206-296)||(40027752-40027841)
chr8 (206-296)||(41827575-41827664)
chr8 (164-286)||(29894474-29894596)
chr8 (130-164)||(32175104-32175138)
chr8 (130-164)||(34474099-34474133)
chr8 (216-296)||(15041352-15041432)
chr8 (206-289)||(7433417-7433499)
chr8 (244-296)||(11202203-11202255)
chr8 (244-296)||(37819256-37819308)
chr8 (206-296)||(7161578-7161667)
chr8 (127-162)||(37101571-37101606)
chr8 (125-155)||(3206346-3206376)
chr8 (130-164)||(45101544-45101578)
chr8 (164-261)||(19293590-19293687)
chr8 (216-296)||(41644198-41644278)
chr8 (244-296)||(957506-957558)
chr8 (128-164)||(13971123-13971159)
chr8 (206-289)||(27640047-27640129)
chr8 (200-244)||(40633408-40633452)
chr8 (244-296)||(44679177-44679229)
[»] chr1 (40 HSPs)
chr1 (163-296)||(32057529-32057662)
chr1 (163-288)||(33188999-33189124)
chr1 (162-288)||(12745549-12745676)
chr1 (162-288)||(12756538-12756665)
chr1 (161-296)||(31489503-31489638)
chr1 (203-289)||(46237603-46237689)
chr1 (164-288)||(9660833-9660957)
chr1 (164-288)||(42763259-42763383)
chr1 (162-288)||(43781177-43781303)
chr1 (164-288)||(45757248-45757372)
chr1 (164-289)||(48470436-48470561)
chr1 (162-296)||(30533365-30533498)
chr1 (164-289)||(49229172-49229296)
chr1 (200-289)||(6501619-6501708)
chr1 (166-296)||(5114871-5115001)
chr1 (164-288)||(47188574-47188695)
chr1 (201-289)||(4220895-4220982)
chr1 (166-296)||(42102156-42102286)
chr1 (163-296)||(19406609-19406742)
chr1 (164-296)||(48812564-48812696)
chr1 (212-284)||(45565782-45565854)
chr1 (206-296)||(1858800-1858889)
chr1 (164-285)||(44372919-44373040)
chr1 (164-296)||(28199181-28199313)
chr1 (164-296)||(44922155-44922287)
chr1 (127-164)||(4638073-4638110)
chr1 (244-289)||(45039032-45039077)
chr1 (215-279)||(15699330-15699394)
chr1 (206-289)||(41310560-41310642)
chr1 (206-289)||(17331278-17331361)
chr1 (206-296)||(30723307-30723396)
chr1 (130-164)||(48872840-48872874)
chr1 (130-164)||(49425884-49425918)
chr1 (259-296)||(39995484-39995521)
chr1 (127-164)||(45272043-45272080)
chr1 (130-162)||(5304719-5304751)
chr1 (136-164)||(7503614-7503642)
chr1 (244-296)||(21088554-21088606)
chr1 (244-296)||(50512005-50512057)
chr1 (136-164)||(52020319-52020347)
[»] chr2 (40 HSPs)
chr2 (190-289)||(15614163-15614262)
chr2 (164-288)||(21747391-21747515)
chr2 (164-288)||(25096278-25096402)
chr2 (162-288)||(15560581-15560707)
chr2 (164-290)||(20922773-20922899)
chr2 (163-288)||(40000802-40000926)
chr2 (164-288)||(29201421-29201545)
chr2 (164-290)||(42730728-42730853)
chr2 (199-296)||(5271081-5271178)
chr2 (164-289)||(9470798-9470923)
chr2 (161-260)||(17088255-17088355)
chr2 (161-289)||(17920758-17920886)
chr2 (164-284)||(26556501-26556622)
chr2 (166-290)||(4564894-4565017)
chr2 (199-290)||(38838051-38838142)
chr2 (190-260)||(17071256-17071326)
chr2 (202-288)||(40861050-40861136)
chr2 (199-260)||(17077328-17077389)
chr2 (164-296)||(27495846-27495978)
chr2 (164-295)||(31742842-31742973)
chr2 (163-296)||(1002521-1002654)
chr2 (164-230)||(12465985-12466051)
chr2 (206-296)||(35439552-35439641)
chr2 (201-296)||(38570685-38570777)
chr2 (244-296)||(13247771-13247823)
chr2 (244-296)||(30801222-30801274)
chr2 (206-296)||(1346294-1346383)
chr2 (123-162)||(7428578-7428617)
chr2 (129-164)||(34138924-34138959)
chr2 (161-255)||(4471014-4471108)
chr2 (130-164)||(19913933-19913967)
chr2 (164-296)||(28222876-28223008)
chr2 (258-296)||(42730064-42730102)
chr2 (216-296)||(2650104-2650184)
chr2 (206-294)||(10440146-10440233)
chr2 (159-191)||(2650184-2650216)
chr2 (130-162)||(16577617-16577649)
chr2 (163-195)||(31618211-31618243)
chr2 (244-296)||(36240768-36240820)
chr2 (136-164)||(45515494-45515522)
[»] chr5 (49 HSPs)
chr5 (164-290)||(37206042-37206168)
chr5 (161-286)||(10642053-10642178)
chr5 (164-288)||(6955797-6955921)
chr5 (164-288)||(35038758-35038882)
chr5 (163-288)||(6238155-6238281)
chr5 (163-288)||(35838080-35838206)
chr5 (164-288)||(6899866-6899991)
chr5 (164-288)||(21731688-21731812)
chr5 (164-288)||(38356031-38356155)
chr5 (199-290)||(38976252-38976343)
chr5 (164-288)||(24477257-24477382)
chr5 (201-296)||(33908126-33908221)
chr5 (167-288)||(4699935-4700057)
chr5 (164-289)||(20338513-20338638)
chr5 (163-288)||(42860321-42860446)
chr5 (201-288)||(9996251-9996338)
chr5 (203-290)||(31230266-31230353)
chr5 (164-254)||(74953-75043)
chr5 (164-296)||(6452985-6453118)
chr5 (207-288)||(36016288-36016369)
chr5 (162-296)||(26264406-26264540)
chr5 (202-290)||(36866128-36866216)
chr5 (164-296)||(7949742-7949874)
chr5 (201-255)||(17085407-17085461)
chr5 (164-289)||(38986610-38986735)
chr5 (199-284)||(1398370-1398456)
chr5 (164-296)||(26507198-26507330)
chr5 (201-286)||(40917914-40917999)
chr5 (201-289)||(3436725-3436813)
chr5 (206-296)||(2466322-2466411)
chr5 (238-289)||(3296166-3296217)
chr5 (214-289)||(4975801-4975876)
chr5 (206-296)||(28759386-28759475)
chr5 (164-296)||(5361187-5361319)
chr5 (126-164)||(39595422-39595460)
chr5 (164-216)||(1845416-1845468)
chr5 (128-164)||(3141644-3141680)
chr5 (244-296)||(20122749-20122801)
chr5 (125-164)||(16202869-16202908)
chr5 (130-164)||(6515328-6515362)
chr5 (130-164)||(42699197-42699231)
chr5 (259-288)||(1845488-1845517)
chr5 (129-162)||(40223673-40223706)
chr5 (206-289)||(1840568-1840650)
chr5 (130-158)||(8955546-8955574)
chr5 (244-296)||(16748996-16749048)
chr5 (244-296)||(17016524-17016576)
chr5 (244-296)||(27345279-27345331)
chr5 (136-164)||(31284289-31284317)
[»] scaffold0295 (2 HSPs)
scaffold0295 (164-296)||(6139-6272)
scaffold0295 (164-256)||(3654-3747)
[»] scaffold1449 (1 HSPs)
scaffold1449 (161-260)||(1581-1680)
[»] scaffold0219 (1 HSPs)
scaffold0219 (163-288)||(16645-16770)
[»] scaffold0664 (1 HSPs)
scaffold0664 (206-296)||(7799-7888)
[»] scaffold0007 (1 HSPs)
scaffold0007 (162-296)||(56193-56326)
[»] scaffold1243 (1 HSPs)
scaffold1243 (163-296)||(1975-2108)
[»] scaffold0173 (1 HSPs)
scaffold0173 (206-288)||(21967-22048)
[»] scaffold0036 (1 HSPs)
scaffold0036 (164-296)||(27587-27719)
[»] scaffold0204 (1 HSPs)
scaffold0204 (130-162)||(27490-27522)
[»] scaffold0001 (1 HSPs)
scaffold0001 (130-162)||(396012-396044)


Alignment Details
Target: chr7 (Bit Score: 206; Significance: 1e-112; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 163 - 508
Target Start/End: Complemental strand, 31272252 - 31271894
Alignment:
Q  163 ctagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccaggg 262  Q
    ||||||||||||||||||| |||||| |||||| |  ||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  31272252 ctagagctgtcaaaacgggtcgggccgtatgggccgacccaaaagcccgaataaaatgtagggcttgggcctaataattgcagcacgaatttttccaggg 31272153  T
Q  263 ctttttagcccggcccgtaaaagcccgtta-------------cccggnnnnnnnntacaagtgggttaagtttggtgtggttttgaaggcatggctttt 349  Q
    |||||||||||||||||||||||| |||||             |||||        ||||||||||||||||||||||||||||||||||||||||||||    
T  31272152 ctttttagcccggcccgtaaaagcacgttagggctacgggtagcccggcaaaaaa-tacaagtgggttaagtttggtgtggttttgaaggcatggctttt 31272054  T
Q  350 aaagttctatcatttttataannnnnnn-aacagctaatattattaatggcctcaatccactcaagctgagcagaaaaaacacaaaagcctctgatataa 448  Q
    |||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||     
T  31272053 aaagttctatcatttttataaatttttttaacagctaatattattaatggcctcaatccactcaagctgagcagaaaaaacacaaaagtctctgatatag 31271954  T
Q  449 cagtaacaatctaacataagaagcttactgcacatccaccaaattaatgttggcatcaat 508  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  31271953 cagtagcaatctaacataagaagcttactccacatccaccaaattaatgttggcatcaat 31271894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 306 - 508
Target Start/End: Original strand, 7505374 - 7505577
Alignment:
Q  306 tacaagtgggttaagtttggtgtggttttgaaggcatggcttttaaagttctatcatttttataannnnnnn-aacagctaatattattaatggcctcaa 404  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||| ||||||||||||||||||||||    
T  7505374 tacaagtgggttaagtttggtgtggttttgaaggcatggcttttaaagttctatcatttttataattttttttaacaactaatattattaatggcctcaa 7505473  T
Q  405 tccactcaagctgagcagaaaaaacacaaaagcctctgatataacagtaacaatctaacataagaagcttactgcacatccaccaaattaatgttggcat 504  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7505474 tccactcaagctgagcagaaaaaacacaaaagcctctgatgtagcagtagcaatctaacataagaagcttactgcacatccaccaaattaatgttggcat 7505573  T
Q  505 caat 508  Q
    ||||    
T  7505574 caat 7505577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 161 - 296
Target Start/End: Original strand, 7505208 - 7505343
Alignment:
Q  161 aactagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccag 260  Q
    ||||||||||||||||||||||||| || |||||| | ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  7505208 aactagagctgtcaaaacgggccggcccgtatgggccggcccgaaagcctgaataaaatgtagggcttgggcctaataattgcagcccgaatttttccag 7505307  T
Q  261 ggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    ||||||||||||||||||||||||||||||||||||    
T  7505308 ggctttttagcccggcccgtaaaagcccgttacccg 7505343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 163 - 288
Target Start/End: Original strand, 23025135 - 23025260
Alignment:
Q  163 ctagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccaggg 262  Q
    ||||||||||||||| |||||||||| || ||| | |||||||||||||||||||||||||||| |||||| |||||||| |||||||| ||    ||||    
T  23025135 ctagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaattgaagaggg 23025234  T
Q  263 ctttttagcccggcccgtaaaagccc 288  Q
    ||||||||||||||||||||||||||    
T  23025235 ctttttagcccggcccgtaaaagccc 23025260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 164 - 289
Target Start/End: Original strand, 35709867 - 35709992
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggc 263  Q
    ||||||||||||||||||   ||||||||||| |||||||||||||||||||||| | ||||| ||||||||| |||||||||||  |||||  ||||||    
T  35709867 tagagctgtcaaaacgggttaggccatatgggccagcccgaaagcccgaataaaacgcagggcttgggcctaaaaattgcagcccatattttatcagggc 35709966  T
Q  264 tttttagcccggcccgtaaaagcccg 289  Q
    |||||||||||||||| |||||||||    
T  35709967 tttttagcccggcccgaaaaagcccg 35709992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 164 - 288
Target Start/End: Original strand, 1873610 - 1873734
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggc 263  Q
    |||||||||||||| |||||||||| || ||| | |||||||||||||||||||||||||||| |||||| |||||||| |||||||| ||    |||||    
T  1873610 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaattgaagagggc 1873709  T
Q  264 tttttagcccggcccgtaaaagccc 288  Q
    |||||||||||||||||||||||||    
T  1873710 tttttagcccggcccgtaaaagccc 1873734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 163 - 288
Target Start/End: Complemental strand, 39494180 - 39494054
Alignment:
Q  163 ctagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttcc-agg 261  Q
    ||||||||||||||| |||||||||| || ||| | |||||||||||||||||||||||||||| |||||| |||||||| |||||||| |||    |||    
T  39494180 ctagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaatttgaatagg 39494081  T
Q  262 gctttttagcccggcccgtaaaagccc 288  Q
    |||||||||||||||| ||||||||||    
T  39494080 gctttttagcccggcctgtaaaagccc 39494054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 163 - 289
Target Start/End: Original strand, 41200196 - 41200322
Alignment:
Q  163 ctagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccaggg 262  Q
    ||||||||||||||| |||||||||| || ||| | |||||||||||| |||||||||||||||||| ||| |  ||| ||||||||||||||| |||||    
T  41200196 ctagagctgtcaaaatgggccgggccttacgggccggcccgaaagcccaaataaaatgtagggcctgagccgataaatagcagcccgaattttttcaggg 41200295  T
Q  263 ctttttagcccggcccgtaaaagcccg 289  Q
     |||||||||||| ||| |||||||||    
T  41200296 ttttttagcccggtccgaaaaagcccg 41200322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 199 - 288
Target Start/End: Original strand, 33604564 - 33604653
Alignment:
Q  199 gcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggctttttagcccggcccgtaaaagccc 288  Q
    ||||||||| |||| ||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||||||    
T  33604564 gcccgaaagtccgagtaaaacgtagggcttgggcctaataattgtagcccgaatttttccagggctttttagcccgacccgaaaaagccc 33604653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 164 - 288
Target Start/End: Original strand, 16526162 - 16526286
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggc 263  Q
    |||||||||||||| |||||||||| || ||| | ||||||||| |||||||||||||||||| || ||| |||||||| |||||||| ||    |||||    
T  16526162 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagtccgaataaaatgtagggcttgagccgaataattggagcccgaaattgaagagggc 16526261  T
Q  264 tttttagcccggcccgtaaaagccc 288  Q
    ||||||| |||||||||||||||||    
T  16526262 tttttagtccggcccgtaaaagccc 16526286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 164 - 288
Target Start/End: Original strand, 49112512 - 49112636
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggc 263  Q
    |||||||||||||| ||| |||||| || ||| | ||||||||||||||||| ||| ||||||||| ||| |  ||| ||||||||||||||| ||||||    
T  49112512 tagagctgtcaaaatgggtcgggccttacgggccggcccgaaagcccgaatataatatagggcctgagccgataaatagcagcccgaattttttcagggc 49112611  T
Q  264 tttttagcccggcccgtaaaagccc 288  Q
    ||||||||||| |||| ||||||||    
T  49112612 tttttagcccgacccgaaaaagccc 49112636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 199 - 289
Target Start/End: Complemental strand, 47381577 - 47381487
Alignment:
Q  199 gcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccg 289  Q
    ||||||||  ||| |||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||    
T  47381577 gcccgaaaatccgcataaaacgtagggcttgggcctaataattggagcccgaatttttccagggctttttagcccggcccaaaaaagcccg 47381487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 199 - 288
Target Start/End: Original strand, 10993195 - 10993285
Alignment:
Q  199 gcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttcc-agggctttttagcccggcccgtaaaagccc 288  Q
    |||||||||||||||||||||||||||| |||||| |||||||| ||| |||| |||    ||||||||||||||||||||||||||||||    
T  10993195 gcccgaaagcccgaataaaatgtagggcttgggccgaataattggagctcgaaatttgaagagggctttttagcccggcccgtaaaagccc 10993285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 199 - 289
Target Start/End: Complemental strand, 17511401 - 17511311
Alignment:
Q  199 gcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccg 289  Q
    ||||||||||| |||||||||||||| |||||||| |  ||| | ||||||||||||| ||||| |||||||||||||||| |||||||||    
T  17511401 gcccgaaagcctgaataaaatgtaggtcctgggccgataaatagtagcccgaattttttcagggttttttagcccggcccgaaaaagcccg 17511311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 199 - 289
Target Start/End: Original strand, 17541813 - 17541903
Alignment:
Q  199 gcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccg 289  Q
    ||||||||||| |||||||||||||| |||||||| |  ||| | ||||||||||||| ||||| |||||||||||||||| |||||||||    
T  17541813 gcccgaaagcctgaataaaatgtaggtcctgggccgataaatagtagcccgaattttttcagggttttttagcccggcccgaaaaagcccg 17541903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 164 - 296
Target Start/End: Original strand, 32795678 - 32795810
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaa-agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagg 261  Q
    |||||||||||||||||||||| || |||||| |||||||   |||||||||||| | |||||| |||| |||| | |||| ||||||||||||   |||    
T  32795678 tagagctgtcaaaacgggccggcccgtatgggccagcccgtttagcccgaataaa-tatagggcttgggtctaaaatattg-agcccgaattttaatagg 32795775  T
Q  262 gctttttagcccggcccgtaaaagcccgttacccg 296  Q
    ||||||||||||||||| |||||||||| ||||||    
T  32795776 gctttttagcccggcccttaaaagcccggtacccg 32795810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 164 - 294
Target Start/End: Complemental strand, 40685758 - 40685628
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccg-aaagcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagg 261  Q
    |||||||||||||||||||||| || |||||||| |||||   ||||||||| |||| |||||| ||||||||| | |||| ||||||||||||   |||    
T  40685758 tagagctgtcaaaacgggccggtccgtatgggtcggcccgtttagcccgaat-aaatatagggcttgggcctaaaatattg-agcccgaattttaatagg 40685661  T
Q  262 gctttttagcccggcccgtaaaagcccgttacc 294  Q
    ||||||||||||| ||| |||||||||| ||||    
T  40685660 gctttttagcccgacccttaaaagcccggtacc 40685628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 164 - 296
Target Start/End: Complemental strand, 37471671 - 37471539
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaa-agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagg 261  Q
    |||||||||||||||||||||| || |||||| | |||||   |||||||||||| | |||| | ||||||||| | |||| ||||||||||||   |||    
T  37471671 tagagctgtcaaaacgggccggcccgtatgggccggcccgtttagcccgaataaa-tataggacttgggcctaaaatattg-agcccgaattttaatagg 37471574  T
Q  262 gctttttagcccggcccgtaaaagcccgttacccg 296  Q
    ||||||||||||||||| |||||||||| ||||||    
T  37471573 gctttttagcccggcccttaaaagcccggtacccg 37471539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 193 - 290
Target Start/End: Complemental strand, 2621543 - 2621446
Alignment:
Q  193 gggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccgt 290  Q
    ||||||||  |||||||||||||||| ||||||  || |||||||||||||||||||||||||  || ||| |||||  |||||||  ||||||||||    
T  2621543 gggtcagcttgaaagcccgaataaaacgtagggtttgagcctaataattgcagcccgaattttctcaaggccttttaatccggcccaaaaaagcccgt 2621446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 163 - 289
Target Start/End: Original strand, 33889179 - 33889305
Alignment:
Q  163 ctagagctgtcaaaacgggccgggccatatgggtcagcccgaa-agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccag 260  Q
    ||||||||||||||||||||| || | |||||||| |||||   |||||||| ||||| |||||| ||||||||| | |||| ||||||||||||   ||    
T  33889179 ctagagctgtcaaaacgggccaggtcgtatgggtcggcccgtttagcccgaa-aaaatatagggcttgggcctaaaatattg-agcccgaattttaatag 33889276  T
Q  261 ggctttttagcccggcccgtaaaagcccg 289  Q
     ||||||||||||||||| ||||||||||    
T  33889277 agctttttagcccggcccttaaaagcccg 33889305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 17475819 - 17475746
Alignment:
Q  216 aaatgtagggcctgggcctaataattgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccg 289  Q
    |||||||||||||| ||| |  ||| ||||||||||||||| ||||| ||||||||||| |||| |||||||||    
T  17475819 aaatgtagggcctgagccgataaatagcagcccgaattttttcagggttttttagcccgacccgaaaaagcccg 17475746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 17577395 - 17577468
Alignment:
Q  216 aaatgtagggcctgggcctaataattgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccg 289  Q
    |||||||||||||| ||| |  ||| ||||||||||||||| ||||| ||||||||||| |||| |||||||||    
T  17577395 aaatgtagggcctgagccgataaatagcagcccgaattttttcagggttttttagcccgacccgaaaaagcccg 17577468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 206 - 296
Target Start/End: Original strand, 8613760 - 8613849
Alignment:
Q  206 agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    |||||||||||| | |||||| ||||||||| | |||| ||||||||||||   |||||||||||||||||||| |||||||||| ||||||    
T  8613760 agcccgaataaa-tatagggcttgggcctaaaatattg-agcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccg 8613849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 129 - 164
Target Start/End: Complemental strand, 40842590 - 40842555
Alignment:
Q  129 tgagtaatgatatttgaacaaccatttcatacaact 164  Q
    ||||||||||||||||||||||||||||||||||||    
T  40842590 tgagtaatgatatttgaacaaccatttcatacaact 40842555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 206 - 296
Target Start/End: Complemental strand, 47761793 - 47761704
Alignment:
Q  206 agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    |||||||||||| | |||||| ||||||||| | |||| ||||||||||||   |||||||||||||||||||| |||||||||| ||||||    
T  47761793 agcccgaataaa-tatagggcttgggcctaaaatattg-agcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccg 47761704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 4266886 - 4266942
Alignment:
Q  217 aatgtagggcctgggcctaataattgcagcccgaatttttccagggctttttagccc 273  Q
    |||||||||| |||||| |  ||| ||||||||||||||| ||||||||||||||||    
T  4266886 aatgtagggcatgggccgataaatagcagcccgaattttttcagggctttttagccc 4266942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 296
Target Start/End: Original strand, 39560512 - 39560601
Alignment:
Q  206 agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    |||||||||||| | |||||| ||||||||| | |||| ||||||||||||   |||||||||||||||||||| ||||||| || ||||||    
T  39560512 agcccgaataaa-tatagggcttgggcctaaaatattg-agcccgaattttaatagggctttttagcccggcccttaaaagctcggtacccg 39560601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 164
Target Start/End: Original strand, 40717126 - 40717161
Alignment:
Q  129 tgagtaatgatatttgaacaaccatttcatacaact 164  Q
    |||||| |||||||||||||||||||||||||||||    
T  40717126 tgagtagtgatatttgaacaaccatttcatacaact 40717161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 130 - 164
Target Start/End: Complemental strand, 7807237 - 7807203
Alignment:
Q  130 gagtaatgatatttgaacaaccatttcatacaact 164  Q
    ||||| |||||||||||||||||||||||||||||    
T  7807237 gagtagtgatatttgaacaaccatttcatacaact 7807203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 130 - 164
Target Start/End: Original strand, 8792489 - 8792523
Alignment:
Q  130 gagtaatgatatttgaacaaccatttcatacaact 164  Q
    |||||||||||||||||||||||||| ||||||||    
T  8792489 gagtaatgatatttgaacaaccatttgatacaact 8792523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 130 - 164
Target Start/End: Complemental strand, 43657184 - 43657150
Alignment:
Q  130 gagtaatgatatttgaacaaccatttcatacaact 164  Q
    ||||| |||||||||||||||||||||||||||||    
T  43657184 gagtagtgatatttgaacaaccatttcatacaact 43657150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 164
Target Start/End: Complemental strand, 19426765 - 19426728
Alignment:
Q  127 tttgagtaatgatatttgaacaaccatttcatacaact 164  Q
    |||||| | |||||||||||||||||||||||||||||    
T  19426765 tttgagaagtgatatttgaacaaccatttcatacaact 19426728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 296
Target Start/End: Complemental strand, 34182124 - 34182087
Alignment:
Q  259 agggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    |||||||||||||||||||| |||||||||| ||||||    
T  34182124 agggctttttagcccggcccttaaaagcccggtacccg 34182087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 296
Target Start/End: Complemental strand, 34202713 - 34202676
Alignment:
Q  259 agggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    |||||||||||||||||||| |||||||||| ||||||    
T  34202713 agggctttttagcccggcccttaaaagcccggtacccg 34202676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 191
Target Start/End: Complemental strand, 35528532 - 35528503
Alignment:
Q  162 actagagctgtcaaaacgggccgggccata 191  Q
    ||||||||||||||||||||||||||||||    
T  35528532 actagagctgtcaaaacgggccgggccata 35528503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 296
Target Start/End: Original strand, 35710647 - 35710684
Alignment:
Q  259 agggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  35710647 agggctttttagcccggccctaaaaagcccgttacccg 35710684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 195
Target Start/End: Complemental strand, 48137359 - 48137326
Alignment:
Q  162 actagagctgtcaaaacgggccgggccatatggg 195  Q
    ||||||||||||||||||||||||||| ||||||    
T  48137359 actagagctgtcaaaacgggccgggccgtatggg 48137326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 136 - 164
Target Start/End: Complemental strand, 28597056 - 28597028
Alignment:
Q  136 tgatatttgaacaaccatttcatacaact 164  Q
    |||||||||||||||||||||||||||||    
T  28597056 tgatatttgaacaaccatttcatacaact 28597028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 136 - 164
Target Start/End: Original strand, 32154445 - 32154473
Alignment:
Q  136 tgatatttgaacaaccatttcatacaact 164  Q
    |||||||||||||||||||||||||||||    
T  32154445 tgatatttgaacaaccatttcatacaact 32154473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 136 - 164
Target Start/End: Original strand, 47424880 - 47424908
Alignment:
Q  136 tgatatttgaacaaccatttcatacaact 164  Q
    |||||||||||||||||||||||||||||    
T  47424880 tgatatttgaacaaccatttcatacaact 47424908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 48522327 - 48522299
Alignment:
Q  130 gagtaatgatatttgaacaaccatttcat 158  Q
    |||||||||||||||||||||||||||||    
T  48522327 gagtaatgatatttgaacaaccatttcat 48522299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 148; Significance: 7e-78; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 306 - 508
Target Start/End: Original strand, 19975929 - 19976135
Alignment:
Q  306 tacaagtgggttaagtttggtgtggttttgaaggcatggcttttaaagttctatcatttttataannnnnnn-aacagctaatattattaatggcctcaa 404  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||    
T  19975929 tacaagtgggttaagtttggtgtggttttgaaggaatggcttttaaagttctatcatttttataaaaaattttaacagctaatattattaatggcctcaa 19976028  T
Q  405 tccactcaagctgagcagaaaa---aacacaaaagcctctgatataacagtaacaatctaacataagaagcttactgcacatccaccaaattaatgttgg 501  Q
    ||||||||||||||||||||||   ||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  19976029 tccactcaagctgagcagaaaaaaaaacacaaaatcctctgatatagcagtagcaatctaacataagaagcttactgcacatccaccaaattaatgttgg 19976128  T
Q  502 catcaat 508  Q
    |||||||    
T  19976129 catcaat 19976135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 163 - 296
Target Start/End: Original strand, 19975753 - 19975886
Alignment:
Q  163 ctagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccaggg 262  Q
    ||||||||||||||||||| |||| | |||||| | |||  ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  19975753 ctagagctgtcaaaacgggtcgggtcgtatgggccggccgaaaagcccgaataaaatgtagggcttgggtctaataattgcagcccgaatttttccaggg 19975852  T
Q  263 ctttttagcccggcccgtaaaagcccgttacccg 296  Q
    |||||||||||||||||||||||| |||||||||    
T  19975853 ctttttagcccggcccgtaaaagctcgttacccg 19975886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 164 - 289
Target Start/End: Complemental strand, 6888856 - 6888731
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggc 263  Q
    ||||| |||||||| ||||||| || |||||| | ||||||||||||| ||||||| |||||| ||||||||||||||| ||||||||||||||||||||    
T  6888856 tagagttgtcaaaatgggccggcccgtatgggccggcccgaaagcccgcataaaatatagggcttgggcctaataattggagcccgaatttttccagggc 6888757  T
Q  264 tttttagcccggcccgtaaaagcccg 289  Q
    |||||||||||||||| |||||||||    
T  6888756 tttttagcccggcccggaaaagcccg 6888731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 161 - 295
Target Start/End: Original strand, 43735955 - 43736088
Alignment:
Q  161 aactagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccag 260  Q
    ||||||||||||||||| ||| |||||| |||||| |||||||||||||||||||||| | |||||||||||| || ||||| ||||| || ||||| ||    
T  43735955 aactagagctgtcaaaatgggtcgggccgtatgggccagcccgaaagcccgaataaaacgcagggcctgggccgaaaaattggagccc-aaattttctag 43736053  T
Q  261 ggctttttagcccggcccgtaaaagcccgttaccc 295  Q
    |||||||||||||||||||||||||||||| ||||    
T  43736054 ggctttttagcccggcccgtaaaagcccgtaaccc 43736088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 199 - 289
Target Start/End: Original strand, 33983000 - 33983090
Alignment:
Q  199 gcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccg 289  Q
    |||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  33983000 gcccgaaagcccaaataaaatgtagggcttgggcctaataattggagcccgaatttttccagggctttttagcccggcccggaaaagcccg 33983090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 164 - 288
Target Start/End: Complemental strand, 21076020 - 21075896
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggc 263  Q
    |||||||||||||| |||||||||| || ||| | |||||||||||||||||||||||||||| |||||| |||||||| |||||||| ||    |||||    
T  21076020 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaattgaagagggc 21075921  T
Q  264 tttttagcccggcccgtaaaagccc 288  Q
    |||||||||||||||||||||||||    
T  21075920 tttttagcccggcccgtaaaagccc 21075896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 162 - 277
Target Start/End: Complemental strand, 42854427 - 42854312
Alignment:
Q  162 actagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagg 261  Q
    |||||||||||||||| |||||||  | |||||| ||||||||||||||| |||||| ||||||| ||||||||||||||| ||||||||||||| || |    
T  42854427 actagagctgtcaaaatgggccggctcgtatgggccagcccgaaagcccgcataaaacgtagggcttgggcctaataattggagcccgaattttttcaag 42854328  T
Q  262 gctttttagcccggcc 277  Q
    ||||||||||||||||    
T  42854327 gctttttagcccggcc 42854312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 163 - 288
Target Start/End: Complemental strand, 43746417 - 43746291
Alignment:
Q  163 ctagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttcc-agg 261  Q
    ||||||||||||||| |||||||||| || ||| | |||||||||||||||||||||||||||| |||||| |||||||| |||||||| |||    |||    
T  43746417 ctagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaatttgaagagg 43746318  T
Q  262 gctttttagcccggcccgtaaaagccc 288  Q
    |||||||||||||||||||||||||||    
T  43746317 gctttttagcccggcccgtaaaagccc 43746291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 164 - 288
Target Start/End: Original strand, 46311832 - 46311956
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggc 263  Q
    |||||||||||||| ||| |||||| || ||| | |||||||||||||||||||||||||||| |||||| |||||||| ||||| || ||    |||||    
T  46311832 tagagctgtcaaaatgggtcgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccaaaattgaagagggc 46311931  T
Q  264 tttttagcccggcccgtaaaagccc 288  Q
    |||||||||||||||||||||||||    
T  46311932 tttttagcccggcccgtaaaagccc 46311956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 200 - 289
Target Start/End: Original strand, 27969482 - 27969571
Alignment:
Q  200 cccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccg 289  Q
    |||||||||||| |||||| ||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||| ||| |||||||||    
T  27969482 cccgaaagcccgcataaaacgtagggcttgggcctaataattggagcccgaatttttcccgggctttttagcccggaccgaaaaagcccg 27969571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 164 - 288
Target Start/End: Original strand, 2868979 - 2869103
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggc 263  Q
    |||||||||||||| ||| |||||| ||||||   |||||||||||||||||||| |||| || ||||||| | ||||||||||||||||| |  |||||    
T  2868979 tagagctgtcaaaaggggtcgggccgtatgggctggcccgaaagcccgaataaaacgtagagcttgggcctgaaaattgcagcccgaatttctttagggc 2869078  T
Q  264 tttttagcccggcccgtaaaagccc 288  Q
    |||||| |||||||||| |||||||    
T  2869079 tttttaacccggcccgtgaaagccc 2869103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 164 - 288
Target Start/End: Original strand, 46219071 - 46219196
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaa-gcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccaggg 262  Q
    |||||||||| ||| |||||||||| || ||| | |||||||| |||||||||||||||||||| |||||| |||||||| |||||||| ||    ||||    
T  46219071 tagagctgtcgaaatgggccgggccgtaagggccggcccgaaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaattgaagaggg 46219170  T
Q  263 ctttttagcccggcccgtaaaagccc 288  Q
    |||||||||| |||||||||||||||    
T  46219171 ctttttagccgggcccgtaaaagccc 46219196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 201 - 288
Target Start/End: Original strand, 27877537 - 27877624
Alignment:
Q  201 ccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggctttttagcccggcccgtaaaagccc 288  Q
    |||||||||||||||||||||||||| |||||| |||||||| |||||||| ||    ||||||||||||||||||||||||||||||    
T  27877537 ccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaattgaagagggctttttagcccggcccgtaaaagccc 27877624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 164 - 289
Target Start/End: Complemental strand, 50738075 - 50737950
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggc 263  Q
    ||||| |||||||| ||  |||| | || ||| ||||||||| | ||||||||||||||||||||||||| |  ||| |||| |||||||||| |||||     
T  50738075 tagagatgtcaaaatggatcgggtcttacgggccagcccgaatgtccgaataaaatgtagggcctgggccgataaatagcagtccgaattttttcagggt 50737976  T
Q  264 tttttagcccggcccgtaaaagcccg 289  Q
    |||||||||||||||| |||||||||    
T  50737975 tttttagcccggcccgaaaaagcccg 50737950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 164 - 289
Target Start/End: Original strand, 50774779 - 50774904
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggc 263  Q
    ||||| |||||||| ||  |||| | || ||| ||||||||| | ||||||||||||||||||||||||| |  ||| |||| |||||||||| |||||     
T  50774779 tagagatgtcaaaatggatcgggtcttacgggccagcccgaatgtccgaataaaatgtagggcctgggccgataaatagcagtccgaattttttcagggt 50774878  T
Q  264 tttttagcccggcccgtaaaagcccg 289  Q
    |||||||||||||||| |||||||||    
T  50774879 tttttagcccggcccgaaaaagcccg 50774904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 163 - 296
Target Start/End: Complemental strand, 7910312 - 7910179
Alignment:
Q  163 ctagagctgtcaaaacgggccgggccatatgggtcagcccgaa-agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccag 260  Q
    ||||||||||||||||||||||| || |||||| | |||||   |||||||||||| | |||||| ||||||||| | |||| ||||||||||||   ||    
T  7910312 ctagagctgtcaaaacgggccggcccgtatgggccggcccgtttagcccgaataaa-tatagggcttgggcctaaaatattg-agcccgaattttaatag 7910215  T
Q  261 ggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    |||||||||||||||||| |||||||||| ||||||    
T  7910214 ggctttttagcccggcccttaaaagcccggtacccg 7910179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 163 - 296
Target Start/End: Original strand, 41933240 - 41933373
Alignment:
Q  163 ctagagctgtcaaaacgggccgggccatatgggtcagcccg-aaagcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccag 260  Q
    |||||||||||||||||||||||||| |||||| | |||||   ||||||||| |||| |||||| ||||||||| | |||| ||||||||||||   ||    
T  41933240 ctagagctgtcaaaacgggccgggccgtatgggccggcccgtttagcccgaat-aaatatagggcttgggcctaaaatattg-agcccgaattttaatag 41933337  T
Q  261 ggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    ||||||| |||||||||| |||||||||| ||||||    
T  41933338 ggcttttcagcccggcccttaaaagcccggtacccg 41933373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 164 - 295
Target Start/End: Complemental strand, 31412286 - 31412155
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaa-agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagg 261  Q
    |||||||||||||||||||||| || ||| || | |||||   |||||||||||| | |||||| ||||||||| | |||| ||||||||||||   |||    
T  31412286 tagagctgtcaaaacgggccggcccgtatagggcggcccgtttagcccgaataaa-tatagggcttgggcctaaaatattg-agcccgaattttaatagg 31412189  T
Q  262 gctttttagcccggcccgtaaaagcccgttaccc 295  Q
    ||||||||||||||||| ||||| |||| |||||    
T  31412188 gctttttagcccggcccttaaaaacccggtaccc 31412155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 244 - 296
Target Start/End: Original strand, 10267883 - 10267935
Alignment:
Q  244 agcccgaatttttccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    ||||||||||||   |||||||||||||||||||| |||||||||||||||||    
T  10267883 agcccgaattttaatagggctttttagcccggcccttaaaagcccgttacccg 10267935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 202 - 289
Target Start/End: Original strand, 21389755 - 21389842
Alignment:
Q  202 cgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccg 289  Q
    |||||||| ||| |||||||||||| ||||||||| ||| ||||||| |||||    |||| ||||| |||| |||||||||||||||    
T  21389755 cgaaagcctgaaaaaaatgtagggcttgggcctaaaaatggcagcccaaatttaaatagggttttttggcccagcccgtaaaagcccg 21389842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 164
Target Start/End: Complemental strand, 46003889 - 46003855
Alignment:
Q  130 gagtaatgatatttgaacaaccatttcatacaact 164  Q
    |||||||||||||||||||||||||||||||||||    
T  46003889 gagtaatgatatttgaacaaccatttcatacaact 46003855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 296
Target Start/End: Complemental strand, 54313498 - 54313366
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaa-agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagg 261  Q
    ||||||||||||||||||||||||| || ||| |||||||   ||||||| |||  | |||||| ||||||| | | |||| ||||||||||||   |||    
T  54313498 tagagctgtcaaaacgggccgggccttacgggccagcccgtttagcccgattaat-tatagggcttgggccttaaatattg-agcccgaattttaatagg 54313401  T
Q  262 gctttttagcccggcccgtaaaagcccgttacccg 296  Q
    |||||||||||||||||  ||||||||| ||||||    
T  54313400 gctttttagcccggccctaaaaagcccggtacccg 54313366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 164 - 295
Target Start/End: Original strand, 1694942 - 1695073
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaa-agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagg 261  Q
    ||||||||||||||||||||||  | ||||||   |||||   |||||||||||| | |||||| ||||||||| | |||| ||||||||||||   |||    
T  1694942 tagagctgtcaaaacgggccggctcgtatgggctggcccgtttagcccgaataaa-tatagggcttgggcctaaaatattg-agcccgaattttaatagg 1695039  T
Q  262 gctttttagcccggcccgtaaaagcccgttaccc 295  Q
    ||||||||||||||||| ||||| |||| |||||    
T  1695040 gctttttagcccggcccttaaaaacccggtaccc 1695073  T

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Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 206 - 289
Target Start/End: Original strand, 7399708 - 7399790
Alignment:
Q  206 agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccg 289  Q
    |||||||||||| | |||||| ||||||||| | |||| ||||||||||||   |||||||||||||||||||| ||||||||||    
T  7399708 agcccgaataaa-tatagggcttgggcctaaaatattg-agcccgaattttaatagggctttttagcccggcccttaaaagcccg 7399790  T

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Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 164 - 224
Target Start/End: Original strand, 11486112 - 11486172
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagg 224  Q
    |||||||||||||||||||||||||| ||||| |  ||||||||||| || |||| |||||    
T  11486112 tagagctgtcaaaacgggccgggccaaatgggccgacccgaaagcccaaaaaaaacgtagg 11486172  T

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Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 244 - 296
Target Start/End: Original strand, 26823062 - 26823114
Alignment:
Q  244 agcccgaatttttccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    ||||||||||||   |||||||||||||||||||| |||||||||| ||||||    
T  26823062 agcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccg 26823114  T

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Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 296
Target Start/End: Complemental strand, 9301170 - 9301081
Alignment:
Q  206 agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    |||||||||||| | |||||| ||||||||| | |||| |||| |||||||   |||||||||||||||||||| |||||||||| ||||||    
T  9301170 agcccgaataaa-tatagggcttgggcctaaaatattg-agccggaattttaatagggctttttagcccggcccttaaaagcccggtacccg 9301081  T

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Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 274
Target Start/End: Original strand, 24310810 - 24310885
Alignment:
Q  199 gcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggctttttagcccg 274  Q
    |||||||| ||||||||||| ||||||  | | ||||| |||||||||||||||||||  |||  |||||||||||    
T  24310810 gcccgaaaacccgaataaaacgtagggtttagacctaaaaattgcagcccgaatttttttaggattttttagcccg 24310885  T

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Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 296
Target Start/End: Original strand, 55423723 - 55423812
Alignment:
Q  206 agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    |||||||||||| | |||||| ||||||||| | |||| ||||||||||||   |||| ||||||||||||||| |||||||||| ||||||    
T  55423723 agcccgaataaa-tatagggcttgggcctaaaatattg-agcccgaattttaatagggttttttagcccggcccttaaaagcccggtacccg 55423812  T

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Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 296
Target Start/End: Original strand, 3994992 - 3995124
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaa-agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagg 261  Q
    ||||||||||||||||||||||||| |||||| | ||||    ||||||| |||| | |||||| | ||||| | | |||| ||||||||||||   |||    
T  3994992 tagagctgtcaaaacgggccgggccgtatgggccggcccatttagcccgattaaa-tatagggcttaggccttaaatattg-agcccgaattttaatagg 3995089  T
Q  262 gctttttagcccggcccgtaaaagcccgttacccg 296  Q
    |||||||||||||||||  ||||||||| ||||||    
T  3995090 gctttttagcccggccctaaaaagcccgctacccg 3995124  T

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Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 130 - 164
Target Start/End: Complemental strand, 6126637 - 6126603
Alignment:
Q  130 gagtaatgatatttgaacaaccatttcatacaact 164  Q
    ||||| |||||||||||||||||||||||||||||    
T  6126637 gagtagtgatatttgaacaaccatttcatacaact 6126603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 130 - 164
Target Start/End: Original strand, 43169643 - 43169677
Alignment:
Q  130 gagtaatgatatttgaacaaccatttcatacaact 164  Q
    ||||| |||||||||||||||||||||||||||||    
T  43169643 gagtagtgatatttgaacaaccatttcatacaact 43169677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 130 - 164
Target Start/End: Complemental strand, 46473310 - 46473276
Alignment:
Q  130 gagtaatgatatttgaacaaccatttcatacaact 164  Q
    |||||||||||||||||||||||||| ||||||||    
T  46473310 gagtaatgatatttgaacaaccatttgatacaact 46473276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 248
Target Start/End: Original strand, 20510554 - 20510639
Alignment:
Q  163 ctagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagccc 248  Q
    |||||| |||||||||||||  |  |||||||| | || ||||||||| ||||||| | ||||  ||||||||| |||||||||||    
T  20510554 ctagagttgtcaaaacgggctagttcatatgggccggctcgaaagcccaaataaaacgcagggtttgggcctaaaaattgcagccc 20510639  T

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Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 159
Target Start/End: Original strand, 36318169 - 36318198
Alignment:
Q  130 gagtaatgatatttgaacaaccatttcata 159  Q
    ||||||||||||||||||||||||||||||    
T  36318169 gagtaatgatatttgaacaaccatttcata 36318198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 278
Target Start/End: Original strand, 36638060 - 36638175
Alignment:
Q  163 ctagagctgtcaaaacgggccgggccatatgggtcagcccg-aaagcccgaataaaatgtagggcctgggcc-taataattgcagcccgaatttttccag 260  Q
    |||||||||||||||| || |||||| |||||| |||||||   |||||| || |||| ||||||||||||| |||  |||| ||||||||||||   ||    
T  36638060 ctagagctgtcaaaacaggtcgggccgtatgggccagcccgtttagcccg-attaaatatagggcctgggccttaaatattg-agcccgaattttaatag 36638157  T
Q  261 ggctttttagcccggccc 278  Q
    |||||||||||| |||||    
T  36638158 ggctttttagcctggccc 36638175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 296
Target Start/End: Original strand, 43088028 - 43088065
Alignment:
Q  259 agggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    |||||||||||||||||||| |||||||||| ||||||    
T  43088028 agggctttttagcccggcccttaaaagcccggtacccg 43088065  T

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Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 244 - 296
Target Start/End: Original strand, 1842582 - 1842634
Alignment:
Q  244 agcccgaatttttccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    ||||||||||||   | |||||||||||||||||| |||||||||| ||||||    
T  1842582 agcccgaattttaatatggctttttagcccggcccttaaaagcccggtacccg 1842634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 244 - 288
Target Start/End: Complemental strand, 10804609 - 10804565
Alignment:
Q  244 agcccgaatttttccagggctttttagcccggcccgtaaaagccc 288  Q
    ||||||||||||   |||||||||||||||||||| |||||||||    
T  10804609 agcccgaattttaatagggctttttagcccggcccttaaaagccc 10804565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 244 - 296
Target Start/End: Original strand, 26898262 - 26898314
Alignment:
Q  244 agcccgaatttttccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    ||||||||||||   |||||||||||||||||||| |||||| ||| ||||||    
T  26898262 agcccgaattttaatagggctttttagcccggcccttaaaagtccggtacccg 26898314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 136 - 164
Target Start/End: Original strand, 31249216 - 31249244
Alignment:
Q  136 tgatatttgaacaaccatttcatacaact 164  Q
    |||||||||||||||||||||||||||||    
T  31249216 tgatatttgaacaaccatttcatacaact 31249244  T

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Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 244 - 296
Target Start/End: Complemental strand, 32774514 - 32774462
Alignment:
Q  244 agcccgaatttttccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    ||||||||||||   ||||||||||||||||||||  ||||||||| ||||||    
T  32774514 agcccgaattttaatagggctttttagcccggccctaaaaagcccggtacccg 32774462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 136 - 164
Target Start/End: Complemental strand, 44695188 - 44695160
Alignment:
Q  136 tgatatttgaacaaccatttcatacaact 164  Q
    |||||||||||||||||||||||||||||    
T  44695188 tgatatttgaacaaccatttcatacaact 44695160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 136 - 164
Target Start/End: Complemental strand, 51650533 - 51650505
Alignment:
Q  136 tgatatttgaacaaccatttcatacaact 164  Q
    |||||||||||||||||||||||||||||    
T  51650533 tgatatttgaacaaccatttcatacaact 51650505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 127; Significance: 2e-65; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 306 - 508
Target Start/End: Original strand, 19240913 - 19241110
Alignment:
Q  306 tacaagtgggttaagtttggtgtggttttgaaggcatggcttttaaagttctatcatttttataannnnnnn-aacagctaatattattaatggcctcaa 404  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||        |||| ||||||||||||||||||||||    
T  19240913 tacaagtgggttaagtttggtgtggttttgaaggcatgg-ttttaaagttcaatcatttttataattttttttaacaactaatattattaatggcctcaa 19241011  T
Q  405 tccactcaagctgagcagaaaaaacacaaaagcctctgatataacagtaacaatctaacataagaagcttactgcacatccaccaaattaatgttggcat 504  Q
    ||||||||| |||||||||||||||||||||||||||  ||     ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19241012 tccactcaaactgagcagaaaaaacacaaaagcctctagta-----gtaacaatctaacataagaagcttactgcacatccaccaaattaatgttggcat 19241106  T

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Target: chr4; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 19554021 - 19553893
Alignment:
Q  1 atccgtctctaaaaataagtaccatttgaagnnnnnnnnttatccataaaatatacggattttttaaattgattgatgaatttaatatttttcttaaaca 100  Q
    |||||||||||||||||||||||||||||||        ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  19554021 atccgtctctaaaaataagtaccatttgaagaaaaaaaattatccataaaatatacagattttttaaattgattgatgaatttaatatttttcttaaaca 19553922  T
Q  101 gaatcaactttaattaatattatctattt 129  Q
     ||||||||||||||||||||||||||||    
T  19553921 caatcaactttaattaatattatctattt 19553893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 164 - 295
Target Start/End: Original strand, 44341168 - 44341299
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggc 263  Q
    |||||||||||||||||||||||||||| ||| | | |||||||||||||||||||||||||| |||||| ||||||||||| ||| ||| |||||||||    
T  44341168 tagagctgtcaaaacgggccgggccatacgggccggtccgaaagcccgaataaaatgtagggcttgggccgaataattgcagtccggattcttccagggc 44341267  T
Q  264 tttttagcccggcccgtaaaagcccgttaccc 295  Q
    ||||||||||||||||||||||||||| ||||    
T  44341268 tttttagcccggcccgtaaaagcccgtaaccc 44341299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 164 - 296
Target Start/End: Original strand, 19240744 - 19240876
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggc 263  Q
    ||||||||||||||||||||||| |||||||  | |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||    
T  19240744 tagagctgtcaaaacgggccgggtcatatggaccggcccgaaagcccgaataaaatgtagggtttgggcctaataattgcagcccgaattttttcagggc 19240843  T
Q  264 tttttagcccggcccgtaaaagcccgttacccg 296  Q
     |||||||||| || ||||||  ||||||||||    
T  19240844 attttagcccgacctgtaaaaatccgttacccg 19240876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 164 - 290
Target Start/End: Original strand, 32594018 - 32594144
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggc 263  Q
    |||||||||||||| |||||||||| || ||| | |||||||||||||||||||||||||| ||||| || |||||||||||||||||||||| ||||||    
T  32594018 tagagctgtcaaaatgggccgggccgtacgggccggcccgaaagcccgaataaaatgtaggacctggaccgaataattgcagcccgaattttttcagggc 32594117  T
Q  264 tttttagcccggcccgtaaaagcccgt 290  Q
    |||||| |||| |||| ||||||||||    
T  32594118 tttttaacccgacccgaaaaagcccgt 32594144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 199 - 289
Target Start/End: Original strand, 32767591 - 32767681
Alignment:
Q  199 gcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccg 289  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  32767591 gcccgaaagcccgaataaaatatagggcttgggcctaataattgcagcccgaatttttccagggctttttagcccggcccgaaaaagcccg 32767681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 199 - 289
Target Start/End: Complemental strand, 43286359 - 43286269
Alignment:
Q  199 gcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccg 289  Q
    |||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  43286359 gcccgagagcccgaataaaacgtagggcttgggcctaataattgcagcccgaatttttccagggctttttagcccggcccgaaaaagcccg 43286269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 158 - 288
Target Start/End: Complemental strand, 54134630 - 54134500
Alignment:
Q  158 tacaactagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttc 257  Q
    ||||| |||||||||||||| |||||||||| || ||||| |||||||||||||||||||||||||||| |||||| |||||||| ||||| || ||       
T  54134630 tacaattagagctgtcaaaatgggccgggccgtaagggtcggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccaaaattgaa 54134531  T
Q  258 cagggctttttagcccggcccgtaaaagccc 288  Q
     ||||||||||||||||||||||||||||||    
T  54134530 gagggctttttagcccggcccgtaaaagccc 54134500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 161 - 288
Target Start/End: Original strand, 17543719 - 17543847
Alignment:
Q  161 aactagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttcc-a 259  Q
    ||||||||||||||||| |||||||||| || ||| | |||||||||||||||||||||||||||| |||||| |||||||| |||||||| |||    |    
T  17543719 aactagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaatttgaaga 17543818  T
Q  260 gggctttttagcccggcccgtaaaagccc 288  Q
    |||||||||||||||||||||||||||||    
T  17543819 gggctttttagcccggcccgtaaaagccc 17543847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 164 - 288
Target Start/End: Complemental strand, 20034430 - 20034306
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggc 263  Q
    |||||||||||||| |||||||||| || ||| | |||||||||||||||||||||||||||| |||||| |||||||| |||||||| ||    |||||    
T  20034430 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaattgaagagggc 20034331  T
Q  264 tttttagcccggcccgtaaaagccc 288  Q
    |||||||||||||||||||||||||    
T  20034330 tttttagcccggcccgtaaaagccc 20034306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 164 - 288
Target Start/End: Original strand, 27869997 - 27870121
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggc 263  Q
    |||||||||||||| |||||||||| || ||| | |||||||||||||||||||||||||||| |||||| |||||||| |||||||| ||    |||||    
T  27869997 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccaaataattggagcccgaaattgaagagggc 27870096  T
Q  264 tttttagcccggcccgtaaaagccc 288  Q
    |||||||||||||||||||||||||    
T  27870097 tttttagcccggcccgtaaaagccc 27870121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 162 - 288
Target Start/End: Original strand, 47295537 - 47295663
Alignment:
Q  162 actagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagg 261  Q
    |||||||||||||||| |||||||||| || ||| | |||||||||||||||||||||||||||| ||| || |||||||| |||||||| ||    |||    
T  47295537 actagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttggaccgaataattggagcccgaaattgaagagg 47295636  T
Q  262 gctttttagcccggcccgtaaaagccc 288  Q
    |||||||||||||||||||||||||||    
T  47295637 gctttttagcccggcccgtaaaagccc 47295663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 165 - 286
Target Start/End: Complemental strand, 1705337 - 1705217
Alignment:
Q  165 agagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggct 264  Q
    ||||||||||||| ||| |||||| || ||| | |||||||||||||||||||||| |||| ||||||| |||||| ||||||||||||||| |||||||    
T  1705337 agagctgtcaaaatgggtcgggccgtacgggccggcccgaaagcccgaataaaatgcagggtctgggccaaataatagcagcccgaattttt-cagggct 1705239  T
Q  265 ttttagcccggcccgtaaaagc 286  Q
    ||||||||||||||| ||||||    
T  1705238 ttttagcccggcccgaaaaagc 1705217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 164 - 288
Target Start/End: Original strand, 39345806 - 39345931
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttcc-aggg 262  Q
    |||||||||||||| |||||||||| || ||| | |||||||||||||||||||||||||||| |||||| |||||||| |||||||| |||    ||||    
T  39345806 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaatttgaataggg 39345905  T
Q  263 ctttttagcccggcccgtaaaagccc 288  Q
    ||||||||||||||||||||||||||    
T  39345906 ctttttagcccggcccgtaaaagccc 39345931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 164 - 288
Target Start/End: Original strand, 951348 - 951472
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggc 263  Q
    |||||||||||||| |||||||||| || ||| | |||||||||||||||||||||||| ||| |||||| ||||| || |||||||| ||    |||||    
T  951348 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtaaggcttgggccgaataagtggagcccgaaattgaagagggc 951447  T
Q  264 tttttagcccggcccgtaaaagccc 288  Q
    |||||||||||||||||||||||||    
T  951448 tttttagcccggcccgtaaaagccc 951472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 199 - 275
Target Start/End: Complemental strand, 3415310 - 3415234
Alignment:
Q  199 gcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggctttttagcccgg 275  Q
    |||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  3415310 gcccgaaagcccgaataaaacgtagggcttgggcctaataattggagcccgaatttttccagggctttttagcccgg 3415234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 164 - 288
Target Start/End: Original strand, 45522475 - 45522599
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggc 263  Q
    |||||||||||||| ||| |||||| || ||| | |||||||||||||||||||||||||||| |||||| |||||||| |||||||| ||    || ||    
T  45522475 tagagctgtcaaaatgggtcgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaattgaagagagc 45522574  T
Q  264 tttttagcccggcccgtaaaagccc 288  Q
    |||||||||||||||||||||||||    
T  45522575 tttttagcccggcccgtaaaagccc 45522599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 167 - 290
Target Start/End: Complemental strand, 34859189 - 34859066
Alignment:
Q  167 agctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggcttt 266  Q
    |||||||||||  ||||||||| || ||||| | |||||| ||||||||||||| |||||||||||| |||||| | |||| |||||||| |||||||||    
T  34859189 agctgtcaaaataggccgggccgtacgggtcggtccgaaaacccgaataaaatgcagggcctgggccgaataatagaagcctgaattttttcagggcttt 34859090  T
Q  267 ttagcccggcccgtaaaagcccgt 290  Q
    ||||||||||||  ||||||||||    
T  34859089 ttagcccggcccaaaaaagcccgt 34859066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 164 - 290
Target Start/End: Complemental strand, 9455469 - 9455343
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggc 263  Q
    |||||||||||||| ||||||| | ||| ||| | | ||||||||||||||||||||||||| |||| |  |||||||||||||||||||||| ||||||    
T  9455469 tagagctgtcaaaatgggccggacaatacgggccggtccgaaagcccgaataaaatgtagggactggactgaataattgcagcccgaattttttcagggc 9455370  T
Q  264 tttttagcccggcccgtaaaagcccgt 290  Q
    ||||||||  |||||| ||||| ||||    
T  9455369 tttttagctgggcccgaaaaaggccgt 9455343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 199 - 289
Target Start/End: Complemental strand, 52464193 - 52464103
Alignment:
Q  199 gcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccg 289  Q
    |||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||| || ||||||||||||||| || |||||||||    
T  52464193 gcccgaaagcccgaataaaacgtagggcttgggcctaataattacagcccgaatttttcaagagctttttagcccggctcgaaaaagcccg 52464103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 164 - 288
Target Start/End: Complemental strand, 2323928 - 2323804
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggc 263  Q
    |||||||||||||| |||||||||| || ||  | | | |||||||||||||||||||||||| |||||| |||||||| |||||||| ||    |||||    
T  2323928 tagagctgtcaaaatgggccgggccgtaaggaccgggctgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaattgaagagggc 2323829  T
Q  264 tttttagcccggcccgtaaaagccc 288  Q
    |||||||||||||||||||||||||    
T  2323828 tttttagcccggcccgtaaaagccc 2323804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 164 - 289
Target Start/End: Original strand, 34030272 - 34030396
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggc 263  Q
    ||||||||||||||| |||||| || || ||| |  |||||||||||||| |||| ||||||| ||||||||| ||| |||||| ||||||   ||||||    
T  34030272 tagagctgtcaaaacaggccggtccgtacgggccgacccgaaagcccgaa-aaaacgtagggcttgggcctaaaaatggcagcctgaatttaaacagggc 34030370  T
Q  264 tttttagcccggcccgtaaaagcccg 289  Q
    ||||| ||||||||||||||||||||    
T  34030371 tttttggcccggcccgtaaaagcccg 34030396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 164 - 273
Target Start/End: Original strand, 41361232 - 41361341
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggc 263  Q
    |||||||||||||||||||  | | ||||||| | |||||||||||||||||||| | | ||| ||||||||| |||||||||||| |||||  ||||||    
T  41361232 tagagctgtcaaaacgggctagcctatatgggccggcccgaaagcccgaataaaacgcatggcttgggcctaaaaattgcagcccgtattttagcagggc 41361331  T
Q  264 tttttagccc 273  Q
    ||||||||||    
T  41361332 tttttagccc 41361341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 1325060 - 1324942
Alignment:
Q  166 gagctgtcaaaacg--ggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggc 263  Q
    ||||||||||||||  |||||| ||||||||  | | ||||||| |||||||||||||| ||| |||||  || ||||  ||||||||||||||||||||    
T  1325060 gagctgtcaaaacgagggccggaccatatggaccggaccgaaagtccgaataaaatgtaaggcttgggctgaaaaattagagcccgaatttttccagggc 1324961  T
Q  264 tttttagcccggcccgtaa 282  Q
    |||||||||| ||||||||    
T  1324960 tttttagcccagcccgtaa 1324942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 164 - 296
Target Start/End: Complemental strand, 56264559 - 56264427
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaa-agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagg 261  Q
    |||||||||||||||||||||| || |||||| | |||||   |||||||||||| | |||||| ||||||||| | |||| ||||||||||||   |||    
T  56264559 tagagctgtcaaaacgggccggcccgtatgggccggcccgtttagcccgaataaa-tatagggcttgggcctaaaatattg-agcccgaattttaatagg 56264462  T
Q  262 gctttttagcccggcccgtaaaagcccgttacccg 296  Q
    ||||||||||||||||| |||||||||| ||||||    
T  56264461 gctttttagcccggcccttaaaagcccggtacccg 56264427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 164 - 296
Target Start/End: Complemental strand, 40731357 - 40731225
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaa-agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagg 261  Q
    |||||||||||||||||||||| || |||||| |  ||||   |||||||||||| | |||||| ||||||||| | |||| |||||| |||||   |||    
T  40731357 tagagctgtcaaaacgggccggcccgtatgggccgacccgtttagcccgaataaa-tatagggcttgggcctaaaatattg-agcccggattttaatagg 40731260  T
Q  262 gctttttagcccggcccgtaaaagcccgttacccg 296  Q
    ||||||||||||||||| |||||||||||||||||    
T  40731259 gctttttagcccggcccttaaaagcccgttacccg 40731225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 170 - 296
Target Start/End: Complemental strand, 1139138 - 1139012
Alignment:
Q  170 tgtcaaaacgggccgggccatatgggtcagcccgaa-agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagggctttt 267  Q
    |||||||||||||||| || |||||| | |||||   |||||||||||| | |||||||||||||||| | |||| ||||| ||||||   |||||||||    
T  1139138 tgtcaaaacgggccggcccgtatgggccggcccgtttagcccgaataaa-tatagggcctgggcctaaaatattg-agcccaaattttaatagggctttt 1139041  T
Q  268 tagcccggcccgtaaaagcccgttacccg 296  Q
    ||||||||||| ||||||| || ||||||    
T  1139040 tagcccggcccttaaaagctcggtacccg 1139012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 164 - 223
Target Start/End: Original strand, 16029724 - 16029783
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtag 223  Q
    |||||||||||||| | | |||||| || ||| |||||||||||||||||||||||||||    
T  16029724 tagagctgtcaaaatgagtcgggccttacgggccagcccgaaagcccgaataaaatgtag 16029783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 238 - 289
Target Start/End: Complemental strand, 51401400 - 51401349
Alignment:
Q  238 aattgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccg 289  Q
    |||| |||||||||||||||||| |||||||||||||||||| |||| ||||    
T  51401400 aattccagcccgaatttttccagagctttttagcccggcccgaaaaaacccg 51401349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 296
Target Start/End: Complemental strand, 401513 - 401381
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaa-agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagg 261  Q
    ||||||||||||||  |||||| || |||||| | |||||   |||||||||||| | |||||| ||||||||| | |||| ||||||||||||   |||    
T  401513 tagagctgtcaaaataggccggcccgtatgggccggcccgtttagcccgaataaa-tatagggcttgggcctaaaatattg-agcccgaattttaatagg 401416  T
Q  262 gctttttagcccggcccgtaaaagcccgttacccg 296  Q
    |||||||||| |||||| |||||||||| ||||||    
T  401415 gctttttagctcggcccttaaaagcccggtacccg 401381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 216 - 296
Target Start/End: Original strand, 15194495 - 15194575
Alignment:
Q  216 aaatgtagggcctgggcctaata-attgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    |||| |||||| ||||||||| | |||| ||||||||||||   |||||||||||||||||||| |||||||||| ||||||    
T  15194495 aaatatagggcttgggcctaaaatattg-agcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccg 15194575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 244 - 296
Target Start/End: Complemental strand, 39240500 - 39240448
Alignment:
Q  244 agcccgaatttttccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    ||||||||||||   |||||||||||||||||||| |||||||||| ||||||    
T  39240500 agcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccg 39240448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 244 - 296
Target Start/End: Complemental strand, 51435650 - 51435598
Alignment:
Q  244 agcccgaatttttccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    ||||||||||||   |||||||||||||||||||| |||||||||| ||||||    
T  51435650 agcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccg 51435598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 164
Target Start/End: Original strand, 1580170 - 1580205
Alignment:
Q  129 tgagtaatgatatttgaacaaccatttcatacaact 164  Q
    |||||| |||||||||||||||||||||||||||||    
T  1580170 tgagtagtgatatttgaacaaccatttcatacaact 1580205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 296
Target Start/End: Complemental strand, 26707020 - 26706931
Alignment:
Q  206 agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    |||||||||||| | |||||| ||||||||| | |||| ||||||||||||   | |||||||||||||||||| |||||||||| ||||||    
T  26707020 agcccgaataaa-tatagggcttgggcctaaaatattg-agcccgaattttaatatggctttttagcccggcccttaaaagcccggtacccg 26706931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 164
Target Start/End: Complemental strand, 30042316 - 30042281
Alignment:
Q  129 tgagtaatgatatttgaacaaccatttcatacaact 164  Q
    |||||||||||||||||||||| |||||||||||||    
T  30042316 tgagtaatgatatttgaacaactatttcatacaact 30042281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 296
Target Start/End: Original strand, 35666590 - 35666679
Alignment:
Q  206 agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    |||||||||||| | |||||| ||||||||| | |||| ||||||||||||   ||||||||||| |||||||| |||||||||| ||||||    
T  35666590 agcccgaataaa-tatagggcttgggcctaaaatattg-agcccgaattttaatagggctttttaccccggcccttaaaagcccggtacccg 35666679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 272
Target Start/End: Original strand, 50004746 - 50004818
Alignment:
Q  199 gcccgaaagcccgaataaaatgtagggcctgggcc-taataattgcagcccgaatttttccagggctttttagcc 272  Q
    ||||| ||||| |||| ||||||||||||||||||  || ||| ||||||||||||||  |||||||||||||||    
T  50004746 gcccggaagcctgaattaaatgtagggcctgggccgaaaaaatagcagcccgaatttt--cagggctttttagcc 50004818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 288
Target Start/End: Original strand, 53724870 - 53724951
Alignment:
Q  206 agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagggctttttagcccggcccgtaaaagccc 288  Q
    |||||||||||| | |||||| ||||||||| | |||| ||||||||||||   |||||||||||||||||||| |||||||||    
T  53724870 agcccgaataaa-tatagggcttgggcctaaaatattg-agcccgaattttaatagggctttttagcccggcccttaaaagccc 53724951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 130 - 164
Target Start/End: Original strand, 22257085 - 22257119
Alignment:
Q  130 gagtaatgatatttgaacaaccatttcatacaact 164  Q
    ||||| |||||||||||||||||||||||||||||    
T  22257085 gagtagtgatatttgaacaaccatttcatacaact 22257119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 130 - 164
Target Start/End: Complemental strand, 31240831 - 31240797
Alignment:
Q  130 gagtaatgatatttgaacaaccatttcatacaact 164  Q
    ||||| |||||||||||||||||||||||||||||    
T  31240831 gagtagtgatatttgaacaaccatttcatacaact 31240797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 130 - 164
Target Start/End: Complemental strand, 36792515 - 36792481
Alignment:
Q  130 gagtaatgatatttgaacaaccatttcatacaact 164  Q
    ||||| |||||||||||||||||||||||||||||    
T  36792515 gagtagtgatatttgaacaaccatttcatacaact 36792481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 378 - 416
Target Start/End: Complemental strand, 51204280 - 51204242
Alignment:
Q  378 aacagctaatattattaatggcctcaatccactcaagct 416  Q
    |||||| |||||||||||||||||||||| |||||||||    
T  51204280 aacagcgaatattattaatggcctcaatctactcaagct 51204242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 287
Target Start/End: Original strand, 16029783 - 16029828
Alignment:
Q  242 gcagcccgaatttttccagggctttttagcccggcccgtaaaagcc 287  Q
    |||||| |||||||| |||||||||||||||||||||  |||||||    
T  16029783 gcagcctgaattttttcagggctttttagcccggcccaaaaaagcc 16029828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 297
Target Start/End: Original strand, 32594851 - 32594888
Alignment:
Q  260 gggctttttagcccggcccgtaaaagcccgttacccgg 297  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  32594851 gggcttttcagcccggcccgaaaaagcccgttacccgg 32594888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 289
Target Start/End: Complemental strand, 39809694 - 39809649
Alignment:
Q  244 agcccgaatttttccagggctttttagcccggcccgtaaaagcccg 289  Q
    ||||||||||||   |||||||||||||||||||| ||||||||||    
T  39809694 agcccgaattttaatagggctttttagcccggcccttaaaagcccg 39809649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 261
Target Start/End: Complemental strand, 54787652 - 54787555
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagg 261  Q
    ||||| |||||||| |||| ||||| || ||| | |||||||| ||| ||||||| ||| ||  ||| |||  |||||||||||||||||||| ||||    
T  54787652 tagagttgtcaaaatgggctgggccgtacgggccggcccgaaaaccctaataaaacgtatggtttggaccttttaattgcagcccgaattttttcagg 54787555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 244 - 296
Target Start/End: Complemental strand, 6643369 - 6643317
Alignment:
Q  244 agcccgaatttttccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    ||||||||||||   |||| ||||||||||||||| |||||||||| ||||||    
T  6643369 agcccgaattttaatagggttttttagcccggcccttaaaagcccggtacccg 6643317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 244 - 296
Target Start/End: Original strand, 16623506 - 16623558
Alignment:
Q  244 agcccgaatttttccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    ||||||||||||   ||||||||||||||||||||  ||||||||| ||||||    
T  16623506 agcccgaattttaatagggctttttagcccggccctaaaaagcccgctacccg 16623558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 48791489 - 48791517
Alignment:
Q  130 gagtaatgatatttgaacaaccatttcat 158  Q
    |||||||||||||||||||||||||||||    
T  48791489 gagtaatgatatttgaacaaccatttcat 48791517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 244 - 296
Target Start/End: Complemental strand, 54094062 - 54094010
Alignment:
Q  244 agcccgaatttttccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    ||||||||||||   |||||||||||||||||||| |||||| ||| ||||||    
T  54094062 agcccgaattttaatagggctttttagcccggcccttaaaagtccggtacccg 54094010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 107; Significance: 2e-53; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 306 - 483
Target Start/End: Complemental strand, 27966722 - 27966550
Alignment:
Q  306 tacaagtgggttaagtttggtgtggttttgaaggcatggcttttaaagttctatcatttttataa-nnnnnnnaacagctaatattattaatggcctcaa 404  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||        |||| ||||||||||||||||||||||    
T  27966722 tacaagtgggttaagtttggtgtggttttgaaggcatgacttttaaagttctatcatttttacaattttttttaacaactaatattattaatggcctcaa 27966623  T
Q  405 tccactcaagctgagcagaaaaaacacaaaagcctctgatataacagtaacaatctaacataagaagcttactgcacat 483  Q
    ||||||||||||||||      ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  27966622 tccactcaagctgagc------aacacaaaagcctctgatatagcagtagcaatctaacataagaagcttactgcacat 27966550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 164 - 289
Target Start/End: Original strand, 20139188 - 20139313
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggc 263  Q
    |||||||||||||||||||| | || |||||| | |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  20139188 tagagctgtcaaaacgggcccgcccgtatgggccggcccgaaagcccgaataaaacgtagggcttgggcctaataattgcagcccgaatttttccagggc 20139287  T
Q  264 tttttagcccggcccgtaaaagcccg 289  Q
    |||||||||||||||| |||||||||    
T  20139288 tttttagcccggcccgaaaaagcccg 20139313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 164 - 289
Target Start/End: Complemental strand, 22193681 - 22193556
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggc 263  Q
    |||||||||||||||||||| | || |||||| | |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  22193681 tagagctgtcaaaacgggcccgcccgtatgggccggcccgaaagcccgaataaaacgtagggcttgggcctaataattgcagcccgaatttttccagggc 22193582  T
Q  264 tttttagcccggcccgtaaaagcccg 289  Q
    |||||||||||||||| |||||||||    
T  22193581 tttttagcccggcccgaaaaagcccg 22193556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 163 - 296
Target Start/End: Complemental strand, 27966887 - 27966754
Alignment:
Q  163 ctagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccaggg 262  Q
    ||||||||||||||||||| ||| || | |||| | |||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  27966887 ctagagctgtcaaaacgggtcggaccgtgtgggccggcccgaaagcccgagtaaaatgtagggcttgggcctaataattgcagcccaaatttttccaggg 27966788  T
Q  263 ctttttagcccggcccgtaaaagcccgttacccg 296  Q
    |||||||||||||||| ||||||||| |||||||    
T  27966787 ctttttagcccggcccataaaagcccattacccg 27966754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 162 - 279
Target Start/End: Complemental strand, 12272343 - 12272226
Alignment:
Q  162 actagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagg 261  Q
    |||||||||||||||| |||||||||| || ||| | ||||||||||||||||||||||||||||||||||| |  ||| ||||||||||||||| ||||    
T  12272343 actagagctgtcaaaatgggccgggccttacgggccggcccgaaagcccgaataaaatgtagggcctgggccgataaatagcagcccgaattttttcagg 12272244  T
Q  262 gctttttagcccggcccg 279  Q
    ||||||||||||||||||    
T  12272243 gctttttagcccggcccg 12272226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 164 - 288
Target Start/End: Complemental strand, 11369712 - 11369587
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttcc-aggg 262  Q
    |||||||||||||| |||||||||| || ||||||||||||||||||||||||||||||| |  |||||| |||||||| |||||||| |||    ||||    
T  11369712 tagagctgtcaaaatgggccgggccgtaagggtcagcccgaaagcccgaataaaatgtagagtttgggccgaataattggagcccgaaatttaaagaggg 11369613  T
Q  263 ctttttagcccggcccgtaaaagccc 288  Q
    ||||||||||||||||||||||||||    
T  11369612 ctttttagcccggcccgtaaaagccc 11369587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 164 - 288
Target Start/End: Original strand, 15065901 - 15066025
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggc 263  Q
    |||||||||||||| | |||||||| || ||| | |||||||||||||||||||||||||||| |||||| |||||||| |||||||| ||    |||||    
T  15065901 tagagctgtcaaaatgagccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaattgaagagggc 15066000  T
Q  264 tttttagcccggcccgtaaaagccc 288  Q
    |||||||||||||||||||||||||    
T  15066001 tttttagcccggcccgtaaaagccc 15066025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 199 - 287
Target Start/End: Complemental strand, 31472586 - 31472498
Alignment:
Q  199 gcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggctttttagcccggcccgtaaaagcc 287  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||| |||||||    
T  31472586 gcccgaaagcccgaataaaacgtagggcttgggcctaataattgcagcccgaatttttctagggctttttagccaggcccgaaaaagcc 31472498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 164 - 296
Target Start/End: Complemental strand, 31655663 - 31655531
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggc 263  Q
    |||||||||||||||||||||||||  ||||| ||||||||||||||||||||||  |||||  ||||||||| |||| ||||||||||   | | ||||    
T  31655663 tagagctgtcaaaacgggccgggccgaatgggccagcccgaaagcccgaataaaacatagggtttgggcctaaaaattacagcccgaataaattccgggc 31655564  T
Q  264 tttttagcccggcccgtaaaagcccgttacccg 296  Q
    |||||||||||| ||| ||||||||||| ||||    
T  31655563 tttttagcccggtccgaaaaagcccgttgcccg 31655531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 164 - 288
Target Start/End: Original strand, 10997714 - 10997838
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggc 263  Q
    |||||||||||||| ||| |||||| || ||| |  ||||||||||||||||||||| ||||| |||||| |||||||| |||||||| ||    |||||    
T  10997714 tagagctgtcaaaatgggtcgggccgtaagggccgacccgaaagcccgaataaaatggagggcttgggccgaataattggagcccgaaattgaagagggc 10997813  T
Q  264 tttttagcccggcccgtaaaagccc 288  Q
    |||||||||||||||||||||||||    
T  10997814 tttttagcccggcccgtaaaagccc 10997838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 201 - 279
Target Start/End: Original strand, 3044290 - 3044368
Alignment:
Q  201 ccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggctttttagcccggcccg 279  Q
    |||||||||||||||||||| |||||||||||| |||||| ||||||||||||||| ||||| ||||||||||||||||    
T  3044290 ccgaaagcccgaataaaatgcagggcctgggccgaataatagcagcccgaattttttcagggttttttagcccggcccg 3044368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 436 - 508
Target Start/End: Complemental strand, 27966549 - 27966477
Alignment:
Q  436 gcctctgatataacagtaacaatctaacataagaagcttactgcacatccaccaaattaatgttggcatcaat 508  Q
    |||||||||||| || || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  27966549 gcctctgatatagcaatagcaatctaacataagaagcttagtgcacatccaccaaattaatgttggcatcaat 27966477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 199 - 289
Target Start/End: Complemental strand, 12076739 - 12076650
Alignment:
Q  199 gcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccg 289  Q
    |||||||||||||||||||||||||||||||| || |  ||| ||||||| ||||||| |||||||||||| ||||||||| |||||||||    
T  12076739 gcccgaaagcccgaataaaatgtagggcctgg-ccgataaatagcagcccaaattttttcagggctttttaacccggcccgaaaaagcccg 12076650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 159 - 296
Target Start/End: Complemental strand, 26555373 - 26555232
Alignment:
Q  159 acaactagagctgtcaaaacgggccgggc----catatgggtcagcccgaa-agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaat 252  Q
    ||||||||||||||||||||||||||| |    |||||||| |||||||   |||||||||||| | |||||| ||||||||| | |||| |||||||||    
T  26555373 acaactagagctgtcaaaacgggccggacggcccatatgggccagcccgtttagcccgaataaa-tatagggcttgggcctaaaatattg-agcccgaat 26555276  T
Q  253 ttttccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    |||   |||||||||||||||||||| |||||||||| ||||||    
T  26555275 tttaatagggctttttagcccggcccttaaaagcccggtacccg 26555232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 170 - 289
Target Start/End: Complemental strand, 32465776 - 32465657
Alignment:
Q  170 tgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggcttttta 269  Q
    ||||||||| |||||| || || ||| |  |||||||||||||| |||||||||||| ||||||||| ||| ||| |||||||||   |||||||||||     
T  32465776 tgtcaaaacaggccggtccgtacgggccgacccgaaagcccgaa-aaaatgtagggcttgggcctaaaaatggcaacccgaatttaaacagggctttttt 32465678  T
Q  270 g-cccggcccgtaaaagcccg 289  Q
    | |||||||||||||||||||    
T  32465677 gacccggcccgtaaaagcccg 32465657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 160 - 296
Target Start/End: Complemental strand, 15068171 - 15068035
Alignment:
Q  160 caactagagctgtcaaaacgggccgggccatatgggtcagcccgaa-agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttc 257  Q
    ||||||||||||||||||||| |||| || |||||||| |||||   |||| ||||||| | |||||| || |||||| | |||| ||||||||||||      
T  15068171 caactagagctgtcaaaacggaccggcccgtatgggtcggcccgtttagcctgaataaa-tatagggcttgtgcctaaaatattg-agcccgaattttaa 15068074  T
Q  258 cagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
     |||||||||||||||||||| |||||||||| ||||||    
T  15068073 tagggctttttagcccggcccttaaaagcccggtacccg 15068035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 161 - 296
Target Start/End: Original strand, 34178400 - 34178535
Alignment:
Q  161 aactagagctgtcaaaacgggccgggccatatgggtcagcccg-aaagcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttcc 258  Q
    ||||||||||||||||||||| |||||| |||||| | |||||   ||||||||| |||| |||||| ||||||||| | |||| ||||| ||||||       
T  34178400 aactagagctgtcaaaacgggtcgggccgtatgggccggcccgtttagcccgaat-aaatatagggcttgggcctaaaatattg-agcccaaattttaat 34178497  T
Q  259 agggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    |||||||||||||||||||| |||||||| | ||||||    
T  34178498 agggctttttagcccggcccttaaaagcctggtacccg 34178535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 166 - 296
Target Start/End: Complemental strand, 29641190 - 29641060
Alignment:
Q  166 gagctgtcaaaacgggccgggccatatgggtcagcccgaa-agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagggc 263  Q
    |||||||||||||||||||| || |||||| |  ||||   |||||||||||| | |||||| ||||||||| | |||| ||||||||||||   |||||    
T  29641190 gagctgtcaaaacgggccggcccgtatgggccgacccgtttagcccgaataaa-tatagggcttgggcctaaaatattg-agcccgaattttaatagggc 29641093  T
Q  264 tttttagcccggcccgtaaaagcccgttacccg 296  Q
    ||||||||||||||| |||||||||| ||||||    
T  29641092 tttttagcccggcccttaaaagcccgatacccg 29641060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 166 - 296
Target Start/End: Complemental strand, 31511369 - 31511239
Alignment:
Q  166 gagctgtcaaaacgggccgggccatatgggtcagcccgaa-agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagggc 263  Q
    |||||||||||||||||||| || |||||| |  ||||   |||||||||||| | |||||| ||||||||| | |||| ||||||||||||   |||||    
T  31511369 gagctgtcaaaacgggccggcccgtatgggccgacccgtttagcccgaataaa-tatagggcttgggcctaaaatattg-agcccgaattttaatagggc 31511272  T
Q  264 tttttagcccggcccgtaaaagcccgttacccg 296  Q
    ||||||||||||||| |||||||||| ||||||    
T  31511271 tttttagcccggcccttaaaagcccgatacccg 31511239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 163 - 288
Target Start/End: Complemental strand, 2703144 - 2703019
Alignment:
Q  163 ctagagctgtcaaaacgggccgggccatatgggtcagcccgaa-agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccag 260  Q
    ||||||||||||||||||||||| || |||||| | ||||    |||||||||||| | |||||| ||||||||| | |||| ||||||||||||   ||    
T  2703144 ctagagctgtcaaaacgggccggcccgtatgggccggcccatttagcccgaataaa-tatagggcttgggcctaaaatattg-agcccgaattttaatag 2703047  T
Q  261 ggctttttagcccggcccgtaaaagccc 288  Q
    |||||||||||||||||| |||||||||    
T  2703046 ggctttttagcccggcccttaaaagccc 2703019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 164 - 296
Target Start/End: Original strand, 17547462 - 17547594
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaa-agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagg 261  Q
    |||||||||||||||||||||| || |||||| | |||||   |||||||||||| | ||| || ||||||||| | |||| ||||||||||||   |||    
T  17547462 tagagctgtcaaaacgggccggcccgtatgggccggcccgtttagcccgaataaa-tatagagcttgggcctaaaatattg-agcccgaattttaatagg 17547559  T
Q  262 gctttttagcccggcccgtaaaagcccgttacccg 296  Q
     |||||||||||||||| |||||||||| ||||||    
T  17547560 actttttagcccggcccttaaaagcccggtacccg 17547594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 212 - 289
Target Start/End: Complemental strand, 17869348 - 17869271
Alignment:
Q  212 aataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccg 289  Q
    |||||||  |||||| |||||  || |||| |||||||||||||| ||||| |||||||||||||||| |||||||||    
T  17869348 aataaaacttagggcttgggctaaaaaattccagcccgaattttttcagggttttttagcccggcccgaaaaagcccg 17869271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 206 - 296
Target Start/End: Original strand, 2067151 - 2067240
Alignment:
Q  206 agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    |||||||||||| | |||||| ||||||||| | |||| ||||||||||||   |||||||||||||||||||| |||||||||| ||||||    
T  2067151 agcccgaataaa-tatagggcttgggcctaaaatattg-agcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccg 2067240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 244 - 296
Target Start/End: Complemental strand, 4171001 - 4170949
Alignment:
Q  244 agcccgaatttttccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    ||||||||||||   |||||||||||||||||||| |||||||||| ||||||    
T  4171001 agcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccg 4170949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 212 - 279
Target Start/End: Complemental strand, 17879100 - 17879033
Alignment:
Q  212 aataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggctttttagcccggcccg 279  Q
    |||||||  |||||| |||||  || |||| |||||||||||||| ||||||||||||||| ||||||    
T  17879100 aataaaacttagggcttgggctaaaaaattccagcccgaattttttcagggctttttagcctggcccg 17879033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 296
Target Start/End: Complemental strand, 9035194 - 9035114
Alignment:
Q  216 aaatgtagggcctgggcctaata-attgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    |||| |||||| ||||||||| | |||| ||||||||||||   ||||||||||||| |||||| |||||||||| ||||||    
T  9035194 aaatatagggcttgggcctaaaatattg-agcccgaattttaatagggctttttagcacggcccttaaaagcccggtacccg 9035114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 296
Target Start/End: Complemental strand, 22988222 - 22988185
Alignment:
Q  259 agggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    |||||||||||||||||||| |||||||||| ||||||    
T  22988222 agggctttttagcccggcccttaaaagcccggtacccg 22988185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 296
Target Start/End: Original strand, 23800174 - 23800211
Alignment:
Q  259 agggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    |||||||||||||||||||| |||||||||| ||||||    
T  23800174 agggctttttagcccggcccttaaaagcccggtacccg 23800211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 4e-39; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 164 - 290
Target Start/End: Original strand, 2349667 - 2349792
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggc 263  Q
    |||||||||||||| |||||||| | || ||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||    
T  2349667 tagagctgtcaaaatgggccgggtcgtacgggccagcccgaaagcccgaataaaatgtagggcctgggccgaataattgcagctcgaattttt-cagggc 2349765  T
Q  264 tttttagcccggcccgtaaaagcccgt 290  Q
    |||||||||||||||  ||||||||||    
T  2349766 tttttagcccggcccaaaaaagcccgt 2349792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 162 - 290
Target Start/End: Original strand, 15243745 - 15243873
Alignment:
Q  162 actagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagg 261  Q
    |||||| ||||||||| ||| |||||| |||||| | ||||||||||| || |||||||||||||||||||| ||||||||||||||||||| || ||||    
T  15243745 actagaactgtcaaaatgggtcgggccgtatgggccggcccgaaagcctgagtaaaatgtagggcctgggccgaataattgcagcccgaattctttcagg 15243844  T
Q  262 gctttttagcccggcccgtaaaagcccgt 290  Q
    |||||||||||||| |||| |||||||||    
T  15243845 gctttttagcccggaccgttaaagcccgt 15243873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 199 - 289
Target Start/End: Complemental strand, 42739459 - 42739369
Alignment:
Q  199 gcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccg 289  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  42739459 gcccgaaagcccgaataaaacgtagggcttgggcctaataattgcagcccgaatttttccagggctttttagcccggcccaaaaaagcccg 42739369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 164 - 288
Target Start/End: Complemental strand, 30436597 - 30436472
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttcc-aggg 262  Q
    |||||||||||||| |||||||||| || ||| | |||||||||||||||||||||||||||| |||||| |||||||| |||||||| |||    ||||    
T  30436597 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaatttgaagaggg 30436498  T
Q  263 ctttttagcccggcccgtaaaagccc 288  Q
    ||||||||||||||||||||||||||    
T  30436497 ctttttagcccggcccgtaaaagccc 30436472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 164 - 288
Target Start/End: Complemental strand, 35813566 - 35813441
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttcc-aggg 262  Q
    |||||||||||||| |||||||||| || ||| | |||||||||||||||||||||||||||| |||||| |||||||| |||||||| |||    ||||    
T  35813566 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaatttgaagaggg 35813467  T
Q  263 ctttttagcccggcccgtaaaagccc 288  Q
    ||||||||||||||||||||||||||    
T  35813466 ctttttagcccggcccgtaaaagccc 35813441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 167 - 290
Target Start/End: Original strand, 28968170 - 28968293
Alignment:
Q  167 agctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggcttt 266  Q
    |||||||||||  ||||||||| || ||||| | |||||| ||||||||||||| |||||||||||| |||||| | |||| |||||||| |||||||||    
T  28968170 agctgtcaaaataggccgggccgtacgggtcggtccgaaaacccgaataaaatgcagggcctgggccgaataatagaagcctgaattttttcagggcttt 28968269  T
Q  267 ttagcccggcccgtaaaagcccgt 290  Q
    ||||||||||||  ||||||||||    
T  28968270 ttagcccggcccaaaaaagcccgt 28968293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 164 - 295
Target Start/End: Original strand, 9201084 - 9201214
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggc 263  Q
    ||||| |||||||||||||||| ||||||||  | ||||||||| |||||||||| ||||||  |||||| ||||||||||||| ||||| || ||| ||    
T  9201084 tagagttgtcaaaacgggccgg-ccatatggaccggcccgaaagtccgaataaaacgtagggtttgggccgaataattgcagcctgaattctttcagagc 9201182  T
Q  264 tttttagcccggcccgtaaaagcccgttaccc 295  Q
    |||||||||||| || ||||||||||| ||||    
T  9201183 tttttagcccggtccataaaagcccgtaaccc 9201214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 164 - 288
Target Start/End: Complemental strand, 3654437 - 3654313
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggc 263  Q
    ||||||||||||||  ||||||||| || ||| | | || ||||||||||||||||||||||| |||||| |||||||| |||||||| ||    |||||    
T  3654437 tagagctgtcaaaataggccgggccgtaagggccggtccaaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaattgaagagggc 3654338  T
Q  264 tttttagcccggcccgtaaaagccc 288  Q
    |||||||| ||||||||||||||||    
T  3654337 tttttagctcggcccgtaaaagccc 3654313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 200 - 287
Target Start/End: Original strand, 3940680 - 3940767
Alignment:
Q  200 cccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggctttttagcccggcccgtaaaagcc 287  Q
    ||||||||||||||||||||||||||| |||||| |||||||| |||||||| ||    |||||||||||||||||||||||||||||    
T  3940680 cccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaattgaagagggctttttagcccggcccgtaaaagcc 3940767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 164 - 296
Target Start/End: Original strand, 5927043 - 5927175
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaa-agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagg 261  Q
    |||||||||||||||||||||| || |||||||| |||||   |||||||||||| | |||||| ||||||||| | |||| ||||||||||||   |||    
T  5927043 tagagctgtcaaaacgggccggcccgtatgggtcggcccgtttagcccgaataaa-tatagggcttgggcctaaaatattg-agcccgaattttaatagg 5927140  T
Q  262 gctttttagcccggcccgtaaaagcccgttacccg 296  Q
    ||||||||||||||||| |||||||||| ||||||    
T  5927141 gctttttagcccggcccttaaaagcccggtacccg 5927175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 163 - 295
Target Start/End: Original strand, 6142867 - 6143000
Alignment:
Q  163 ctagagctgtcaaaacgggccgggccatatgggtcagcccgaaa-gcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagg 261  Q
    ||||||||||||||| ||  ||||||||| ||| | | |||||| | || ||||||| |||||   | |||| ||||||||||||||| ||| |||||||    
T  6142867 ctagagctgtcaaaatggatcgggccatacgggccggaccgaaaagtccaaataaaacgtaggatttaggccgaataattgcagcccggattcttccagg 6142966  T
Q  262 gctttttagcccggcccgtaaaagcccgttaccc 295  Q
    ||||||||||||||||||||||| ||||| ||||    
T  6142967 gctttttagcccggcccgtaaaaacccgtaaccc 6143000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 164 - 296
Target Start/End: Original strand, 6266236 - 6266368
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaa-agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagg 261  Q
    |||||||||||||||||||||| || |||||| | |||||   |||||||||||| | |||||| ||||||||| | |||| ||||||||||||   |||    
T  6266236 tagagctgtcaaaacgggccggcccgtatgggccggcccgtttagcccgaataaa-tatagggcttgggcctaaaatattg-agcccgaattttaatagg 6266333  T
Q  262 gctttttagcccggcccgtaaaagcccgttacccg 296  Q
    ||||||||||||||||| |||||||||| ||||||    
T  6266334 gctttttagcccggcccttaaaagcccggtacccg 6266368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 164 - 296
Target Start/End: Complemental strand, 31895087 - 31894956
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaa-agcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccaggg 262  Q
    |||||||||||||||||||||| ||||| ||  | |||||   |||||||||||| | |||||| |||||||||  |||| ||||||||||||   ||||    
T  31895087 tagagctgtcaaaacgggccggcccatacggaccggcccgtttagcccgaataaa-tatagggcttgggcctaaatattg-agcccgaattttaataggg 31894990  T
Q  263 ctttttagcccggcccgtaaaagcccgttacccg 296  Q
    |||||||||||||||| |||||||||| ||||||    
T  31894989 ctttttagcccggcccttaaaagcccggtacccg 31894956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 164 - 296
Target Start/End: Complemental strand, 24101901 - 24101769
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaa-gcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagg 261  Q
    |||||||||||||||||||||| || |||||| | |||||    ||||||||||| | |||||| ||||||||| | |||| ||||||||||||   |||    
T  24101901 tagagctgtcaaaacgggccggcccgtatgggccggcccgtttcgcccgaataaa-tatagggcttgggcctaaaatattg-agcccgaattttaatagg 24101804  T
Q  262 gctttttagcccggcccgtaaaagcccgttacccg 296  Q
    ||||||||||||||||| |||||||||| ||||||    
T  24101803 gctttttagcccggcccttaaaagcccggtacccg 24101769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 164 - 296
Target Start/End: Complemental strand, 38231880 - 38231749
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccaggg 262  Q
    |||||||||||||||||||||| || |||||| | |||    || |||||| |||| |||||| ||||||||| | |||| ||||||||||||   ||||    
T  38231880 tagagctgtcaaaacgggccggcccgtatgggccggccgtttagtccgaat-aaatatagggcttgggcctaaaatattg-agcccgaattttaataggg 38231783  T
Q  263 ctttttagcccggcccgtaaaagcccgttacccg 296  Q
    |||||||||||||||| |||||||||| ||||||    
T  38231782 ctttttagcccggcccttaaaagcccggtacccg 38231749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 207 - 296
Target Start/End: Complemental strand, 45451859 - 45451769
Alignment:
Q  207 gcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttt-tccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    |||||||||||||||||||| || ||| |||||||||||| ||||||||    ||| |||||||||||||| ||||||| ||||| |||||    
T  45451859 gcccgaataaaatgtagggcttgagccgaataattgcagctcgaattttgaagaggactttttagcccggctcgtaaaaacccgtaacccg 45451769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 206 - 296
Target Start/End: Original strand, 26098281 - 26098370
Alignment:
Q  206 agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    |||||||||||| | |||||| ||||||||| | |||| ||||||||||||   |||||||||||||||||||| |||||||||| ||||||    
T  26098281 agcccgaataaa-tatagggcttgggcctaaaatattg-agcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccg 26098370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 206 - 296
Target Start/End: Original strand, 40027752 - 40027841
Alignment:
Q  206 agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    |||||||||||| | |||||| ||||||||| | |||| ||||||||||||   |||||||||||||||||||| |||||||||| ||||||    
T  40027752 agcccgaataaa-tatagggcttgggcctaaaatattg-agcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccg 40027841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 206 - 296
Target Start/End: Complemental strand, 41827664 - 41827575
Alignment:
Q  206 agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    |||||||||||| | |||||| ||||||||| | |||| ||||||||||||   |||||||||||||||||||| |||||||||| ||||||    
T  41827664 agcccgaataaa-tatagggcttgggcctaaaatattg-agcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccg 41827575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 286
Target Start/End: Complemental strand, 29894596 - 29894474
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggc 263  Q
    ||||||| |||||| ||| |||| |  ||||| | |||| ||||||||||||||| ||||| | ||| ||||| |||||||||||||||   | ||||      
T  29894596 tagagctatcaaaatgggtcgggtcgaatgggccggcccaaaagcccgaataaaacgtaggacttggacctaaaaattgcagcccgaataaattcaggat 29894497  T
Q  264 tttttagcccggcccgtaaaagc 286  Q
    |||||||||||| ||| ||||||    
T  29894496 tttttagcccggtccgaaaaagc 29894474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 164
Target Start/End: Complemental strand, 32175138 - 32175104
Alignment:
Q  130 gagtaatgatatttgaacaaccatttcatacaact 164  Q
    |||||||||||||||||||||||||||||||||||    
T  32175138 gagtaatgatatttgaacaaccatttcatacaact 32175104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 164
Target Start/End: Complemental strand, 34474133 - 34474099
Alignment:
Q  130 gagtaatgatatttgaacaaccatttcatacaact 164  Q
    |||||||||||||||||||||||||||||||||||    
T  34474133 gagtaatgatatttgaacaaccatttcatacaact 34474099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 216 - 296
Target Start/End: Original strand, 15041352 - 15041432
Alignment:
Q  216 aaatgtagggcctgggcctaata-attgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    |||| |||||| ||||||||| | |||| ||||||||||||   |||||||||||||||||||| |||||||||| ||||||    
T  15041352 aaatatagggcttgggcctaagatattg-agcccgaattttaatagggctttttagcccggcccttaaaagcccgatacccg 15041432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 206 - 289
Target Start/End: Original strand, 7433417 - 7433499
Alignment:
Q  206 agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccg 289  Q
    |||||||||||| | |||||| ||||||||| | |||| ||||||||||||   |||||||||||||||||||| ||||||||||    
T  7433417 agcccgaataaa-tatagggcttgggcctaaaatattg-agcccgaattttaatagggctttttagcccggcccttaaaagcccg 7433499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 244 - 296
Target Start/End: Complemental strand, 11202255 - 11202203
Alignment:
Q  244 agcccgaatttttccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    ||||||||||||   |||||||||||||||||||| |||||||||| ||||||    
T  11202255 agcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccg 11202203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 244 - 296
Target Start/End: Original strand, 37819256 - 37819308
Alignment:
Q  244 agcccgaatttttccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    ||||||||||||   |||||||||||||||||||| |||||||||| ||||||    
T  37819256 agcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccg 37819308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 296
Target Start/End: Original strand, 7161578 - 7161667
Alignment:
Q  206 agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    |||||||||||| | |||||| ||||||||| | |||| ||||||||||||   |||||||||||||||| ||| |||||||||| ||||||    
T  7161578 agcccgaataaa-tatagggcttgggcctaaaatattg-agcccgaattttaatagggctttttagcccgtcccttaaaagcccggtacccg 7161667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 162
Target Start/End: Original strand, 37101571 - 37101606
Alignment:
Q  127 tttgagtaatgatatttgaacaaccatttcatacaa 162  Q
    |||||||| |||||||||||||||||||||||||||    
T  37101571 tttgagtagtgatatttgaacaaccatttcatacaa 37101606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 125 - 155
Target Start/End: Original strand, 3206346 - 3206376
Alignment:
Q  125 tatttgagtaatgatatttgaacaaccattt 155  Q
    |||||||||||||||||||||||||||||||    
T  3206346 tatttgagtaatgatatttgaacaaccattt 3206376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 130 - 164
Target Start/End: Complemental strand, 45101578 - 45101544
Alignment:
Q  130 gagtaatgatatttgaacaaccatttcatacaact 164  Q
    ||||| |||||||||||||||||||||||||||||    
T  45101578 gagtagtgatatttgaacaaccatttcatacaact 45101544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 261
Target Start/End: Complemental strand, 19293687 - 19293590
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagg 261  Q
    ||||| |||||||| |||| ||||| || ||| | |||||||| ||| ||||||| ||| ||  ||| |||  |||||||||||||||||||| ||||    
T  19293687 tagagttgtcaaaatgggctgggccgtacgggccggcccgaaaaccctaataaaacgtatggtttggaccttttaattgcagcccgaattttttcagg 19293590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 296
Target Start/End: Complemental strand, 41644278 - 41644198
Alignment:
Q  216 aaatgtagggcctgggcctaata-attgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    |||| |||||| ||||||||| | |||| ||||||||||||   ||| |||||||||||||||| |||||||||| ||||||    
T  41644278 aaatatagggcttgggcctaaaatattg-agcccgaattttaataggcctttttagcccggcccttaaaagcccggtacccg 41644198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 244 - 296
Target Start/End: Original strand, 957506 - 957558
Alignment:
Q  244 agcccgaatttttccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    ||||||||||||   ||||||||||||||||||||  ||||||||| ||||||    
T  957506 agcccgaattttaatagggctttttagcccggccctaaaaagcccgctacccg 957558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 13971123 - 13971159
Alignment:
Q  128 ttgagtaatgatatttgaacaaccatttcatacaact 164  Q
    ||||| ||||||||||||||| |||||||||||||||    
T  13971123 ttgagaaatgatatttgaacatccatttcatacaact 13971159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 206 - 289
Target Start/End: Complemental strand, 27640129 - 27640047
Alignment:
Q  206 agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccg 289  Q
    |||||||||||| | |||||| ||||||||| | |||| |||||||| |||   |||||||||||||||||||| ||||||||||    
T  27640129 agcccgaataaa-tatagggcttgggcctaaaatattg-agcccgaaatttaatagggctttttagcccggcccttaaaagcccg 27640047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 200 - 244
Target Start/End: Complemental strand, 40633452 - 40633408
Alignment:
Q  200 cccgaaagcccgaataaaatgtagggcctgggcctaataattgca 244  Q
    ||||||| |||||||||||||||| ||||||||| || |||||||    
T  40633452 cccgaaatcccgaataaaatgtagagcctgggccaaaaaattgca 40633408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 244 - 296
Target Start/End: Complemental strand, 44679229 - 44679177
Alignment:
Q  244 agcccgaatttttccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    ||||||||||||   ||||||||||||||||| || |||||||||| ||||||    
T  44679229 agcccgaattttaatagggctttttagcccggtccttaaaagcccggtacccg 44679177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 4e-36; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 163 - 296
Target Start/End: Original strand, 32057529 - 32057662
Alignment:
Q  163 ctagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccaggg 262  Q
    ||||||||||||||| ||| |||||| |||||| | |||||||| ||||||||||| | |||||||||||| || ||||| |||||||||||||| ||||    
T  32057529 ctagagctgtcaaaatggggcgggccgtatgggccggcccgaaatcccgaataaaacgcagggcctgggccgaaaaattggagcccgaatttttctaggg 32057628  T
Q  263 ctttttagcccggcccgtaaaagcccgttacccg 296  Q
    ||||||||||||| |||||||||||||| |||||    
T  32057629 ctttttagcccggtccgtaaaagcccgtaacccg 32057662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 163 - 288
Target Start/End: Original strand, 33188999 - 33189124
Alignment:
Q  163 ctagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccaggg 262  Q
    ||||||||||||||| |||||||||| || ||| | |||||||||||||||||||||||||||| |||||| |||||||| |||||||| ||    ||||    
T  33188999 ctagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaattgaagaggg 33189098  T
Q  263 ctttttagcccggcccgtaaaagccc 288  Q
    ||||||||||||||||||||||||||    
T  33189099 ctttttagcccggcccgtaaaagccc 33189124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 162 - 288
Target Start/End: Original strand, 12745549 - 12745676
Alignment:
Q  162 actagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttcc-ag 260  Q
    |||||||||||||||| |||||||||| || ||| | |||||||||||||||||||||||||||| |||||| |||||||| |||||||| |||    ||    
T  12745549 actagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaatttgaatag 12745648  T
Q  261 ggctttttagcccggcccgtaaaagccc 288  Q
    ||||||||||||||||||||||||||||    
T  12745649 ggctttttagcccggcccgtaaaagccc 12745676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 162 - 288
Target Start/End: Original strand, 12756538 - 12756665
Alignment:
Q  162 actagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttcc-ag 260  Q
    |||||||||||||||| |||||||||| || ||| | |||||||||||||||||||||||||||| |||||| |||||||| |||||||| |||    ||    
T  12756538 actagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaatttgaatag 12756637  T
Q  261 ggctttttagcccggcccgtaaaagccc 288  Q
    ||||||||||||||||||||||||||||    
T  12756638 ggctttttagcccggcccgtaaaagccc 12756665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 161 - 296
Target Start/End: Complemental strand, 31489638 - 31489503
Alignment:
Q  161 aactagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccag 260  Q
    ||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||  |||||| ||||||||| |||| ||||||||||   | | |    
T  31489638 aactagagctgtcaaaacgggccgggccgaatgggccagcccgaaagcccgaataaaacatagggcttgggcctaaaaattacagcccgaataaattccg 31489539  T
Q  261 ggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    ||||||||| ||||||||| ||| ||||||||||||    
T  31489538 ggctttttaacccggcccgaaaaggcccgttacccg 31489503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 203 - 289
Target Start/End: Complemental strand, 46237689 - 46237603
Alignment:
Q  203 gaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccg 289  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  46237689 gaaagcccgaataaaatatagggcttgggcctaataattgcagcccgaatttttccagggctttttagctcggcccgaaaaagcccg 46237603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 164 - 288
Target Start/End: Complemental strand, 9660957 - 9660833
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggc 263  Q
    |||||||||||||| |||||||||| || ||| | |||||||| ||||||||||||||||||| |||||| |||||||| |||||||| ||    |||||    
T  9660957 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaatcccgaataaaatgtagggcttgggccgaataattggagcccgaaattgaagagggc 9660858  T
Q  264 tttttagcccggcccgtaaaagccc 288  Q
    |||||||||||||||||||||||||    
T  9660857 tttttagcccggcccgtaaaagccc 9660833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 164 - 288
Target Start/End: Complemental strand, 42763383 - 42763259
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggc 263  Q
    |||||||||||||| |||||||||| || ||| | |||||||||||||||||||||||||||| |||||| |||||||| |||||||| ||    |||||    
T  42763383 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattgaagcccgaaattgaagagggc 42763284  T
Q  264 tttttagcccggcccgtaaaagccc 288  Q
    |||||||||||| ||||||||||||    
T  42763283 tttttagcccggtccgtaaaagccc 42763259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 162 - 288
Target Start/End: Complemental strand, 43781303 - 43781177
Alignment:
Q  162 actagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagg 261  Q
    |||||||||||||||| ||||| |||| || ||| | |||||||||||||||||||||||||||| |||||| |||||||| |||||||| ||    |||    
T  43781303 actagagctgtcaaaatgggccaggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaattgaagagg 43781204  T
Q  262 gctttttagcccggcccgtaaaagccc 288  Q
    | |||||||||||||||||||||||||    
T  43781203 gttttttagcccggcccgtaaaagccc 43781177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 164 - 288
Target Start/End: Complemental strand, 45757372 - 45757248
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggc 263  Q
    |||||||||||||| ||| |||||| || ||| | |||||||||||||||||||||||||||| |||||| |||||||| |||||||| ||    |||||    
T  45757372 tagagctgtcaaaatgggtcgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaattgaagagggc 45757273  T
Q  264 tttttagcccggcccgtaaaagccc 288  Q
    ||||||||||||||| |||||||||    
T  45757272 tttttagcccggcccataaaagccc 45757248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 164 - 289
Target Start/End: Complemental strand, 48470561 - 48470436
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggc 263  Q
    ||||| |||||||| ||| |||||| || ||| | |||| |||||||||||||||||||||| ||||||| |  ||| ||||||||||||||| |||| |    
T  48470561 tagaggtgtcaaaatgggtcgggccttacgggccggcccaaaagcccgaataaaatgtagggtctgggccgataaatagcagcccgaattttttcaggac 48470462  T
Q  264 tttttagcccggcccgtaaaagcccg 289  Q
    |||||||||||||||| |||||||||    
T  48470461 tttttagcccggcccgaaaaagcccg 48470436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 162 - 296
Target Start/End: Original strand, 30533365 - 30533498
Alignment:
Q  162 actagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagg 261  Q
    ||||||||||||||||||| |||| ||| ||||||| |||||||||||||||||||||||||| | ||||||||| |||| ||||||| ||   |   ||    
T  30533365 actagagctgtcaaaacggaccggaccaaatgggtcggcccgaaagcccgaataaaatgtaggtcttgggcctaaaaattacagcccggatagattatgg 30533464  T
Q  262 gctttttagcccggcccgtaaaagcccgttacccg 296  Q
    |||||||||||||||||| |||||| |||| ||||    
T  30533465 gctttttagcccggcccg-aaaagctcgttgcccg 30533498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 164 - 289
Target Start/End: Complemental strand, 49229296 - 49229172
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggc 263  Q
    |||||||||||||| || ||||||| || ||| |||||||||||||||||||||||| ||||  |||||| |  ||| |||||||| |||||| ||||||    
T  49229296 tagagctgtcaaaatggaccgggccttacgggccagcccgaaagcccgaataaaatgcagggtttgggccgataaatagcagcccggattttttcagggc 49229197  T
Q  264 tttttagcccggcccgtaaaagcccg 289  Q
    |||||||||| ||||| |||||||||    
T  49229196 tttttagccc-gcccgaaaaagcccg 49229172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 200 - 289
Target Start/End: Original strand, 6501619 - 6501708
Alignment:
Q  200 cccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccg 289  Q
    ||||||||||||||||||||| |||||||||||| |  ||| | ||||| ||||||| ||| |||||||||||||||||| |||||||||    
T  6501619 cccgaaagcccgaataaaatgcagggcctgggccgataaatagaagcccaaattttttcagagctttttagcccggcccgaaaaagcccg 6501708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 166 - 296
Target Start/End: Original strand, 5114871 - 5115001
Alignment:
Q  166 gagctgtcaaaacgggccgggccatatgggtcagcccgaa-agcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggct 264  Q
    |||||||||||||||||||| || |||||| | |||||   |||||||||||| | |||||| ||||||||| |  |  ||||||||||||   ||||||    
T  5114871 gagctgtcaaaacgggccggcccgtatgggccggcccgtttagcccgaataaa-tatagggcttgggcctaaaatattaagcccgaattttaatagggct 5114969  T
Q  265 ttttagcccggcccgtaaaagcccgttacccg 296  Q
    |||||||||||||| |||||||||| ||||||    
T  5114970 ttttagcccggcccttaaaagcccggtacccg 5115001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 164 - 288
Target Start/End: Complemental strand, 47188695 - 47188574
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggc 263  Q
    |||||||||||||| ||||||| || || | | | ||| |||||||||||||||||||||||| |||||  |||||||| |||| ||| ||    ||| |    
T  47188695 tagagctgtcaaaatgggccgg-ccgtaagagccggcctgaaagcccgaataaaatgtagggcttgggc--aataattggagcctgaaattgaagaggac 47188599  T
Q  264 tttttagcccggcccgtaaaagccc 288  Q
    |||||||||||||||||||||||||    
T  47188598 tttttagcccggcccgtaaaagccc 47188574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 201 - 289
Target Start/End: Original strand, 4220895 - 4220982
Alignment:
Q  201 ccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccg 289  Q
    ||||||||||||| |||||| |||||||||||| || ||| || |||| |||||||  |||||||||||||| |||||| |||||||||    
T  4220895 ccgaaagcccgaaaaaaatgcagggcctgggccgaaaaatggccgcccaaatttttttagggctttttagcctggcccg-aaaagcccg 4220982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 166 - 296
Target Start/End: Original strand, 42102156 - 42102286
Alignment:
Q  166 gagctgtcaaaacgggccgggccatatgggtcagcccg-aaagcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagggc 263  Q
    ||||||||||||||||||||||| |||||| |||||||   ||||||||| |||| |||||  |||| |||| | |||| ||||||||||||   |||||    
T  42102156 gagctgtcaaaacgggccgggccgtatgggccagcccgtttagcccgaat-aaatatagggtttgggtctaaaatattg-agcccgaattttaatagggc 42102253  T
Q  264 tttttagcccggcccgtaaaagcccgttacccg 296  Q
    ||||||||||||||| ||||||| || ||||||    
T  42102254 tttttagcccggcccttaaaagctcggtacccg 42102286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 163 - 296
Target Start/End: Original strand, 19406609 - 19406742
Alignment:
Q  163 ctagagctgtcaaaacgggccgggccatatgggtcagcccgaa-agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccag 260  Q
    |||||| |||||||| ||||||| || |||||| | |||||   |||||||||||| | |||||| ||||||||| | |||| ||||||||||||   ||    
T  19406609 ctagagttgtcaaaatgggccggcccgtatgggccggcccgtttagcccgaataaa-tatagggcttgggcctaaaatattg-agcccgaattttaatag 19406706  T
Q  261 ggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    |||||||||||||||||| |||||||||| ||||||    
T  19406707 ggctttttagcccggcccttaaaagcccggtacccg 19406742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 164 - 296
Target Start/End: Complemental strand, 48812696 - 48812564
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaa-agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagg 261  Q
    |||||||||||||||||||||| || |||||| |  ||||   |||||||||||| | |||||| ||||||||| | |||| ||||||||||||   |||    
T  48812696 tagagctgtcaaaacgggccggcccgtatgggccgtcccgtttagcccgaataaa-tatagggcttgggcctaaaatattg-agcccgaattttaatagg 48812599  T
Q  262 gctttttagcccggcccgtaaaagcccgttacccg 296  Q
    ||||||||||||| ||| |||||||||| ||||||    
T  48812598 gctttttagcccgacccttaaaagcccggtacccg 48812564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 284
Target Start/End: Original strand, 45565782 - 45565854
Alignment:
Q  212 aataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggctttttagcccggcccgtaaaa 284  Q
    ||||||||||||||||| |||  |  ||| |||||||||| |||| |||||||||||||||||||||| ||||    
T  45565782 aataaaatgtagggcctaggctgataaatagcagcccgaaatttttcagggctttttagcccggcccgaaaaa 45565854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 206 - 296
Target Start/End: Complemental strand, 1858889 - 1858800
Alignment:
Q  206 agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    |||||||||||| | |||||| ||||||||| | |||| ||||||||||||   |||||||||||||||||||| |||||||||| ||||||    
T  1858889 agcccgaataaa-tatagggcttgggcctaaaatattg-agcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccg 1858800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 164 - 285
Target Start/End: Complemental strand, 44373040 - 44372919
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccg-aaagcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagg 261  Q
    ||||||||||||||||| |||| ||||||||| | |||||   ||||||||| |||| |||||| ||||||||| | |||| |||| |||||||   |||    
T  44373040 tagagctgtcaaaacggaccggcccatatgggccggcccgtttagcccgaat-aaatatagggcttgggcctaaaatattg-agcctgaattttaatagg 44372943  T
Q  262 gctttttagcccggcccgtaaaag 285  Q
    ||||||||||||||||| ||||||    
T  44372942 gctttttagcccggcccttaaaag 44372919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 296
Target Start/End: Original strand, 28199181 - 28199313
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaa-agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagg 261  Q
    |||||||||||||||||||||| |  |||||| | |||||   |||||||||||| | |||||  ||||||||| | |||| |||||||||||    |||    
T  28199181 tagagctgtcaaaacgggccggcctgtatgggccggcccgtttagcccgaataaa-tatagggtttgggcctaaaatattg-agcccgaatttgaatagg 28199278  T
Q  262 gctttttagcccggcccgtaaaagcccgttacccg 296  Q
    ||||||||||||||||| |||||||||| ||||||    
T  28199279 gctttttagcccggcccttaaaagcccggtacccg 28199313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 296
Target Start/End: Original strand, 44922155 - 44922287
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccg-aaagcccgaataaaatgtagggcctgggcc-taataattgcagcccgaatttttccagg 261  Q
    ||||||||||||||||||||||||| |||||| |||||||   ||||| ||| || | || ||| |||||| |||  |||| ||||||||||||   |||    
T  44922155 tagagctgtcaaaacgggccgggccgtatgggccagcccgtttagccc-aattaattataaggcttgggccttaaatattg-agcccgaattttaatagg 44922252  T
Q  262 gctttttagcccggcccgtaaaagcccgttacccg 296  Q
    |||||||||||||||||  ||||||||| ||||||    
T  44922253 gctttttagcccggccctaaaaagcccgctacccg 44922287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 127 - 164
Target Start/End: Complemental strand, 4638110 - 4638073
Alignment:
Q  127 tttgagtaatgatatttgaacaaccatttcatacaact 164  Q
    |||||||| |||||||||||||||||||||||||||||    
T  4638110 tttgagtagtgatatttgaacaaccatttcatacaact 4638073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 244 - 289
Target Start/End: Original strand, 45039032 - 45039077
Alignment:
Q  244 agcccgaatttttccagggctttttagcccggcccgtaaaagcccg 289  Q
    ||||||||||||||||||| ||||||||||| |||| |||||||||    
T  45039032 agcccgaatttttccagggttttttagcccgacccgaaaaagcccg 45039077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 15699394 - 15699330
Alignment:
Q  215 aaaatgtagggcctgggcctaataattgcagcccgaatttttccagggctttttagcccggcccg 279  Q
    |||| ||||||| ||||||||| ||| |||||||||||||   ||||||||||| ||||||||||    
T  15699394 aaaaggtagggcttgggcctaaaaatggcagcccgaatttaaacagggctttttggcccggcccg 15699330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 206 - 289
Target Start/End: Complemental strand, 41310642 - 41310560
Alignment:
Q  206 agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccg 289  Q
    |||||||||||| | |||||| ||||||||| | |||| ||||||||||||   |||||||||||||||||||| ||||||||||    
T  41310642 agcccgaataaa-tatagggcttgggcctaaaatattg-agcccgaattttaatagggctttttagcccggcccttaaaagcccg 41310560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 289
Target Start/End: Original strand, 17331278 - 17331361
Alignment:
Q  206 agcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccg 289  Q
    ||||||||||||||||||||||||| || |  ||| ||||| | | ||||| ||||||||||||| | || ||| |||||||||    
T  17331278 agcccgaataaaatgtagggcctggaccgataaatagcagctcaagttttttcagggctttttaggctggtccgaaaaagcccg 17331361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 296
Target Start/End: Original strand, 30723307 - 30723396
Alignment:
Q  206 agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    |||||||||||| | |||||| ||||||||| | |||| ||||||||||||   |||| ||||||||||||||| |||||||||| ||||||    
T  30723307 agcccgaataaa-tatagggcttgggcctaaaatattg-agcccgaattttaatagggttttttagcccggcccttaaaagcccggtacccg 30723396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 130 - 164
Target Start/End: Original strand, 48872840 - 48872874
Alignment:
Q  130 gagtaatgatatttgaacaaccatttcatacaact 164  Q
    ||||| |||||||||||||||||||||||||||||    
T  48872840 gagtagtgatatttgaacaaccatttcatacaact 48872874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 130 - 164
Target Start/End: Complemental strand, 49425918 - 49425884
Alignment:
Q  130 gagtaatgatatttgaacaaccatttcatacaact 164  Q
    ||||| |||||||||||||||||||||||||||||    
T  49425918 gagtagtgatatttgaacaaccatttcatacaact 49425884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 296
Target Start/End: Complemental strand, 39995521 - 39995484
Alignment:
Q  259 agggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    |||||||||||||||||||| |||||||||| ||||||    
T  39995521 agggctttttagcccggcccttaaaagcccggtacccg 39995484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 164
Target Start/End: Original strand, 45272043 - 45272080
Alignment:
Q  127 tttgagtaatgatatttgaacaaccatttcatacaact 164  Q
    |||||| | |||||||||||||||||||||||||||||    
T  45272043 tttgaggagtgatatttgaacaaccatttcatacaact 45272080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 162
Target Start/End: Original strand, 5304719 - 5304751
Alignment:
Q  130 gagtaatgatatttgaacaaccatttcatacaa 162  Q
    ||||| |||||||||||||||||||||||||||    
T  5304719 gagtagtgatatttgaacaaccatttcatacaa 5304751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 136 - 164
Target Start/End: Complemental strand, 7503642 - 7503614
Alignment:
Q  136 tgatatttgaacaaccatttcatacaact 164  Q
    |||||||||||||||||||||||||||||    
T  7503642 tgatatttgaacaaccatttcatacaact 7503614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 244 - 296
Target Start/End: Complemental strand, 21088606 - 21088554
Alignment:
Q  244 agcccgaatttttccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    ||||||||||||  |||| |||||||||||||||  |||||||||| ||||||    
T  21088606 agcccgaattttaacaggcctttttagcccggcctttaaaagcccggtacccg 21088554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 244 - 296
Target Start/End: Complemental strand, 50512057 - 50512005
Alignment:
Q  244 agcccgaatttttccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    ||||||||||||   ||||||||||||||||||||  ||||||||| ||||||    
T  50512057 agcccgaattttaatagggctttttagcccggccctaaaaagcccgctacccg 50512005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 136 - 164
Target Start/End: Original strand, 52020319 - 52020347
Alignment:
Q  136 tgatatttgaacaaccatttcatacaact 164  Q
    |||||||||||||||||||||||||||||    
T  52020319 tgatatttgaacaaccatttcatacaact 52020347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 7e-35; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 190 - 289
Target Start/End: Complemental strand, 15614262 - 15614163
Alignment:
Q  190 tatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccg 289  Q
    |||||| | ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  15614262 tatgggccggcccgaaagcccgaataaaatatagggcttgggcctaataattgcagcccgaatttttccagggctttttagcccgccccgaaaaagcccg 15614163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 164 - 288
Target Start/End: Original strand, 21747391 - 21747515
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggc 263  Q
    |||||||||||||| |||||||||| || ||| | |||||||||||||||||||||||||||| |||||| |||||||| |||||||| ||    |||||    
T  21747391 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaattgaagagggc 21747490  T
Q  264 tttttagcccggcccgtaaaagccc 288  Q
    |||||||||||||||||||||||||    
T  21747491 tttttagcccggcccgtaaaagccc 21747515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 164 - 288
Target Start/End: Original strand, 25096278 - 25096402
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggc 263  Q
    |||||||||||||| |||||||||| || ||| | |||||||||||||||||||||||||||| |||||| |||||||| |||||||| ||    |||||    
T  25096278 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaattgaagagggc 25096377  T
Q  264 tttttagcccggcccgtaaaagccc 288  Q
    |||||||||||||||||||||||||    
T  25096378 tttttagcccggcccgtaaaagccc 25096402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 162 - 288
Target Start/End: Complemental strand, 15560707 - 15560581
Alignment:
Q  162 actagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagg 261  Q
    ||||||||||||||||  ||||||||| || ||| | |||||||||||||||||||||||||||| |||||| |||||||| |||||||| ||    |||    
T  15560707 actagagctgtcaaaataggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaattgaagagg 15560608  T
Q  262 gctttttagcccggcccgtaaaagccc 288  Q
    |||||||||||||||||||||||||||    
T  15560607 gctttttagcccggcccgtaaaagccc 15560581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 164 - 290
Target Start/End: Complemental strand, 20922899 - 20922773
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggc 263  Q
    ||||||||||||||  ||||||||| || ||| | | |||||||||||||||||||| || | ||| ||| |||||||||||||||||||||| ||||||    
T  20922899 tagagctgtcaaaattggccgggccgtacgggccggtccgaaagcccgaataaaatgcagagtctgtgccgaataattgcagcccgaattttttcagggc 20922800  T
Q  264 tttttagcccggcccgtaaaagcccgt 290  Q
    |||||||||||||||| ||||||||||    
T  20922799 tttttagcccggcccgaaaaagcccgt 20922773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 163 - 288
Target Start/End: Complemental strand, 40000926 - 40000802
Alignment:
Q  163 ctagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccaggg 262  Q
    ||||||||||||||| |||||||||| || ||| | |||||||||||||||||||||||||||| |||||| ||||||||  ||||||| ||    ||||    
T  40000926 ctagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattg-ggcccgaaattgaagaggg 40000828  T
Q  263 ctttttagcccggcccgtaaaagccc 288  Q
    ||||||||||||||||||||||||||    
T  40000827 ctttttagcccggcccgtaaaagccc 40000802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 164 - 288
Target Start/End: Complemental strand, 29201545 - 29201421
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggc 263  Q
    |||||||||||||| ||| |||||| || ||| | | |||||||||||||||||||||||||| |||||| |||||||| |||||||| ||    |||||    
T  29201545 tagagctgtcaaaatgggtcgggccgtaagggccgggccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaattgaagagggc 29201446  T
Q  264 tttttagcccggcccgtaaaagccc 288  Q
    |||||||||||||||||||||||||    
T  29201445 tttttagcccggcccgtaaaagccc 29201421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 164 - 290
Target Start/End: Complemental strand, 42730853 - 42730728
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggc 263  Q
    |||||||||||||| ||  |||||| || ||| | | |||||||||||||||||||| ||||| |||||| |||||| ||||||||||||||| ||||||    
T  42730853 tagagctgtcaaaatggatcgggccgtacgggccgggccgaaagcccgaataaaatgcagggcttgggccgaataatagcagcccgaattttttcagggc 42730754  T
Q  264 tttttagcccggcccgtaaaagcccgt 290  Q
    ||||||||||| |||| ||||||||||    
T  42730753 tttttagcccgacccg-aaaagcccgt 42730728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 199 - 296
Target Start/End: Original strand, 5271081 - 5271178
Alignment:
Q  199 gcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    |||||||||||||||||||||| ||||| |||||| || ||||| |||||||||||||||||| ||||||||||||||||| |||| ||||| |||||    
T  5271081 gcccgaaagcccgaataaaatgcagggcttgggccgaaaaattggagcccgaatttttccaggactttttagcccggcccgcaaaaccccgtaacccg 5271178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 164 - 289
Target Start/End: Original strand, 9470798 - 9470923
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggc 263  Q
    |||||||||||||| || ||||||| ||  || | |||||||||||||||||||||||||||  |||||| |  ||| ||||||||||||||| ||||||    
T  9470798 tagagctgtcaaaatggaccgggccttacaggccggcccgaaagcccgaataaaatgtagggtttgggccgataaatagcagcccgaattttttcagggc 9470897  T
Q  264 tttttagcccggcccgtaaaagcccg 289  Q
    |||||||||||||||| |||| ||||    
T  9470898 tttttagcccggcccgaaaaatcccg 9470923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 161 - 260
Target Start/End: Complemental strand, 17088355 - 17088255
Alignment:
Q  161 aactagagctgtcaaaacgggccgggccatat-gggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttcca 259  Q
    ||||||||||||||||||||||||| || ||| ||| | |||||||||||||||||||||||||||  ||||| ||||||||  ||||||||||||||||    
T  17088355 aactagagctgtcaaaacgggccggcccgtattgggccggcccgaaagcccgaataaaatgtagggtttgggcttaataattttagcccgaatttttcca 17088256  T
Q  260 g 260  Q
    |    
T  17088255 g 17088255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 161 - 289
Target Start/End: Original strand, 17920758 - 17920886
Alignment:
Q  161 aactagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccag 260  Q
    ||||||||||||||||| ||| |||||| ||  || | ||||||||||| |||||||||||||||  |||||| |  ||| |||||| ||||||||  ||    
T  17920758 aactagagctgtcaaaatgggtcgggccttacaggccggcccgaaagcctgaataaaatgtagggtttgggccgataaatagcagcctgaatttttttag 17920857  T
Q  261 ggctttttagcccggcccgtaaaagcccg 289  Q
    ||||||||||||||||||| |||||||||    
T  17920858 ggctttttagcccggcccgaaaaagcccg 17920886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 164 - 284
Target Start/End: Complemental strand, 26556622 - 26556501
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttt-tccaggg 262  Q
    |||||| ||||||| |||||||| | || ||| | ||||||||| |||| ||||||||||||| |||||| |||||||||||| ||||||||    ||||    
T  26556622 tagagccgtcaaaatgggccgggacgtacgggccggcccgaaagtccgattaaaatgtagggcttgggccgaataattgcagctcgaattttgaagaggg 26556523  T
Q  263 ctttttagcccggcccgtaaaa 284  Q
    ||||||||||||||||||||||    
T  26556522 ctttttagcccggcccgtaaaa 26556501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 166 - 290
Target Start/End: Original strand, 4564894 - 4565017
Alignment:
Q  166 gagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggctt 265  Q
    |||||||||||||||||||| ||||||||  | ||| ||| || ||||||||||||||||| || |||||| |||||||||||||| |||||||| | ||    
T  4564894 gagctgtcaaaacgggccggcccatatggaccggcctgaacgctcgaataaaatgtagggcttgtgcctaaaaattgcagcccgaaattttccagag-tt 4564992  T
Q  266 tttagcccggcccgtaaaagcccgt 290  Q
    |||| |||  |||| ||||||||||    
T  4564993 tttaacccaacccgaaaaagcccgt 4565017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 199 - 290
Target Start/End: Complemental strand, 38838142 - 38838051
Alignment:
Q  199 gcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccgt 290  Q
    |||||||||||||||||||| ||||||| ||||||||| |||||||| ||||||||||  | ||||| |||||||| ||| |||||||||||    
T  38838142 gcccgaaagcccgaataaaacgtagggcttgggcctaaaaattgcagtccgaatttttttaaggcttgttagcccgacccataaaagcccgt 38838051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 190 - 260
Target Start/End: Complemental strand, 17071326 - 17071256
Alignment:
Q  190 tatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccag 260  Q
    |||||| | |||||||||||||||||||||||||||  ||||| |||||||| ||||||||||||||||||    
T  17071326 tatgggccggcccgaaagcccgaataaaatgtagggtttgggcttaataatttcagcccgaatttttccag 17071256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 40861136 - 40861050
Alignment:
Q  202 cgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggctttttagcccggcccgtaaaagccc 288  Q
    ||||||||||||||||||||||||| || ||| |||||||| |||||||| ||    |||||||||||||| |||||||||||||||    
T  40861136 cgaaagcccgaataaaatgtagggcttgagccgaataattggagcccgaaattgaagagggctttttagcctggcccgtaaaagccc 40861050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 199 - 260
Target Start/End: Complemental strand, 17077389 - 17077328
Alignment:
Q  199 gcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccag 260  Q
    |||||||||||||||||||||||||||  ||||| |||||||| ||||||||||||||||||    
T  17077389 gcccgaaagcccgaataaaatgtagggtttgggcttaataatttcagcccgaatttttccag 17077328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 164 - 296
Target Start/End: Original strand, 27495846 - 27495978
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaa-agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagg 261  Q
    ||||||||||||||||| |||| || |||||| | |||||   |||||||||||| | |||||| ||||||||| | |||| ||||||||||||   |||    
T  27495846 tagagctgtcaaaacggaccggcccgtatgggccggcccgtttagcccgaataaa-tatagggcttgggcctaaaatattg-agcccgaattttaatagg 27495943  T
Q  262 gctttttagcccggcccgtaaaagcccgttacccg 296  Q
    ||||||||||||||||| |||||||||| ||||||    
T  27495944 gctttttagcccggcccttaaaagcccggtacccg 27495978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 164 - 295
Target Start/End: Original strand, 31742842 - 31742973
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaa-agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagg 261  Q
    |||||||||||||||||||||| || |||||| | |||||   |||||||||||| | |||||| ||||||||| | |||| ||||||||||||   ||     
T  31742842 tagagctgtcaaaacgggccggcccgtatgggccggcccgtttagcccgaataaa-tatagggcttgggcctaaaatattg-agcccgaattttaataga 31742939  T
Q  262 gctttttagcccggcccgtaaaagcccgttaccc 295  Q
    ||||||||||||||||| |||||||||| |||||    
T  31742940 gctttttagcccggcccttaaaagcccggtaccc 31742973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 163 - 296
Target Start/End: Complemental strand, 1002654 - 1002521
Alignment:
Q  163 ctagagctgtcaaaacgggccgggccatatgggtcagcccgaa-agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccag 260  Q
    ||||||||||||||| ||| |||||| |||||||| |||||   |||||||||||| | |||||  ||||||||| | |||| ||| ||||||||   ||    
T  1002654 ctagagctgtcaaaatgggtcgggccgtatgggtcggcccgtttagcccgaataaa-tatagggtttgggcctaaaatattg-agctcgaattttaatag 1002557  T
Q  261 ggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    |||||||||||||||||| |||||||||| ||||||    
T  1002556 ggctttttagcccggcccataaaagcccggtacccg 1002521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 164 - 230
Target Start/End: Complemental strand, 12466051 - 12465985
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgg 230  Q
    |||||||||||||| ||| | |||| |||||||| |||||||||||| ||| |||||||||||||||    
T  12466051 tagagctgtcaaaatgggtcaggccttatgggtcggcccgaaagcccaaattaaatgtagggcctgg 12465985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 206 - 296
Target Start/End: Complemental strand, 35439641 - 35439552
Alignment:
Q  206 agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    |||||||||||| | |||||| ||||||||| | |||| ||||||||||||   |||||||||||||||||||| |||||||||| ||||||    
T  35439641 agcccgaataaa-tatagggcttgggcctaaaatattg-agcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccg 35439552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 201 - 296
Target Start/End: Original strand, 38570685 - 38570777
Alignment:
Q  201 ccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    |||||||||||||||||   |||||| ||||||||| |||||||||||||||     || ||||||||||||||| ||| |||| ||| |||||||    
T  38570685 ccgaaagcccgaataaa---tagggcttgggcctaaaaattgcagcccgaataaactcaaggctttttagcccggtccgaaaaaaccctttacccg 38570777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 244 - 296
Target Start/End: Original strand, 13247771 - 13247823
Alignment:
Q  244 agcccgaatttttccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    ||||||||||||   |||||||||||||||||||| |||||||||| ||||||    
T  13247771 agcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccg 13247823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 244 - 296
Target Start/End: Complemental strand, 30801274 - 30801222
Alignment:
Q  244 agcccgaatttttccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    ||||||||||||   |||||||||||||||||||| |||||||||| ||||||    
T  30801274 agcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccg 30801222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 296
Target Start/End: Complemental strand, 1346383 - 1346294
Alignment:
Q  206 agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    |||||||||||| | |||||| ||||||||| | |||| ||||||||||||   |||||||||||||||||||| |||||| ||| ||||||    
T  1346383 agcccgaataaa-tatagggcttgggcctaaaatattg-agcccgaattttaatagggctttttagcccggcccttaaaagtccggtacccg 1346294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 162
Target Start/End: Complemental strand, 7428617 - 7428578
Alignment:
Q  123 tctatttgagtaatgatatttgaacaaccatttcatacaa 162  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  7428617 tctatttgagcagtgatatttgaacaaccatttcatacaa 7428578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 164
Target Start/End: Original strand, 34138924 - 34138959
Alignment:
Q  129 tgagtaatgatatttgaacaaccatttcatacaact 164  Q
    |||||| |||||||||||||||||||||||||||||    
T  34138924 tgagtagtgatatttgaacaaccatttcatacaact 34138959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 161 - 255
Target Start/End: Complemental strand, 4471108 - 4471014
Alignment:
Q  161 aactagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttt 255  Q
    ||||||||||||||||| ||||||     || ||| | |||| |||||| || ||||||||||||| |||||| |||||| ||||||| ||||||    
T  4471108 aactagagctgtcaaaatgggccgaattgtacgggccggcccaaaagcctgattaaaatgtagggcttgggccaaataatggcagcccaaatttt 4471014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 130 - 164
Target Start/End: Complemental strand, 19913967 - 19913933
Alignment:
Q  130 gagtaatgatatttgaacaaccatttcatacaact 164  Q
    ||||| |||||||||||||||||||||||||||||    
T  19913967 gagtagtgatatttgaacaaccatttcatacaact 19913933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 296
Target Start/End: Original strand, 28222876 - 28223008
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaa-agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagg 261  Q
    ||||||||||||||||||||||| | |||||| | |||     |||||||||||| | ||||| |||||||||| | | || ||||||||||||   |||    
T  28222876 tagagctgtcaaaacgggccgggtcgtatgggccggcctatttagcccgaataaa-tatagggtctgggcctaaaataatg-agcccgaattttaatagg 28222973  T
Q  262 gctttttagcccggcccgtaaaagcccgttacccg 296  Q
    ||||||||||||||| | |||||||||| ||||||    
T  28222974 gctttttagcccggctcttaaaagcccggtacccg 28223008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 258 - 296
Target Start/End: Complemental strand, 42730102 - 42730064
Alignment:
Q  258 cagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  42730102 cagggcttttcagcccggcccttaaaagcccgttacccg 42730064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 296
Target Start/End: Complemental strand, 2650184 - 2650104
Alignment:
Q  216 aaatgtagggcctgggcctaata-attgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    |||| |||||| ||||||||| | |||| ||||||||||||   ||||||||||||||||| || |||||||||| ||||||    
T  2650184 aaatatagggcttgggcctaaaatattg-agcccgaattttaatagggctttttagcccggtccttaaaagcccggtacccg 2650104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 294
Target Start/End: Original strand, 10440146 - 10440233
Alignment:
Q  206 agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccgttacc 294  Q
    |||||||||||| | |||||| ||||||||| | |||| ||||||||||||   |||||||||||||||| ||| |||||||||| ||||    
T  10440146 agcccgaataaa-tatagggcttgggcctaaaatattg-agcccgaattttaatagggctttttagcccgacccttaaaagcccggtacc 10440233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 191
Target Start/End: Complemental strand, 2650216 - 2650184
Alignment:
Q  159 acaactagagctgtcaaaacgggccgggccata 191  Q
    ||||||||||||||||||||||||||| |||||    
T  2650216 acaactagagctgtcaaaacgggccggcccata 2650184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 162
Target Start/End: Complemental strand, 16577649 - 16577617
Alignment:
Q  130 gagtaatgatatttgaacaaccatttcatacaa 162  Q
    ||||||||||||||||| |||||||||||||||    
T  16577649 gagtaatgatatttgaataaccatttcatacaa 16577617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 31618243 - 31618211
Alignment:
Q  163 ctagagctgtcaaaacgggccgggccatatggg 195  Q
    |||||||||||||||||||||||||| ||||||    
T  31618243 ctagagctgtcaaaacgggccgggccttatggg 31618211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 244 - 296
Target Start/End: Complemental strand, 36240820 - 36240768
Alignment:
Q  244 agcccgaatttttccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    ||||||||||||   |||||||||||||||| ||| |||||||||| ||||||    
T  36240820 agcccgaattttaatagggctttttagcccgacccttaaaagcccggtacccg 36240768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 136 - 164
Target Start/End: Original strand, 45515494 - 45515522
Alignment:
Q  136 tgatatttgaacaaccatttcatacaact 164  Q
    |||||||||||||||||||||||||||||    
T  45515494 tgatatttgaacaaccatttcatacaact 45515522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 3e-34; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 164 - 290
Target Start/End: Complemental strand, 37206168 - 37206042
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggc 263  Q
    |||||||||||||||||||||| || ||| || | |||||||||||||||||||| ||||||| ||||||||| ||||||| ||||| |||||  |||||    
T  37206168 tagagctgtcaaaacgggccggcccgtataggccggcccgaaagcccgaataaaacgtagggcttgggcctaaaaattgcaacccgattttttttagggc 37206069  T
Q  264 tttttagcccggcccgtaaaagcccgt 290  Q
    |||||||| ||||||||||||||||||    
T  37206068 tttttagctcggcccgtaaaagcccgt 37206042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 161 - 286
Target Start/End: Complemental strand, 10642178 - 10642053
Alignment:
Q  161 aactagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccag 260  Q
    ||||||||||||||||| |||||||||| || ||| | |||||||||||||||||||||||||||| |||||| |||||||| |||||||| ||    ||    
T  10642178 aactagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaattgaagag 10642079  T
Q  261 ggctttttagcccggcccgtaaaagc 286  Q
    ||||||||||||||||||||||||||    
T  10642078 ggctttttagcccggcccgtaaaagc 10642053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 164 - 288
Target Start/End: Complemental strand, 6955921 - 6955797
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggc 263  Q
    |||||||||||||| |||||||||| || ||| | |||||||||||||||||||||||||||| |||||| |||||||| |||||||| ||    |||||    
T  6955921 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaattgaagagggc 6955822  T
Q  264 tttttagcccggcccgtaaaagccc 288  Q
    |||||||||||||||||||||||||    
T  6955821 tttttagcccggcccgtaaaagccc 6955797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 164 - 288
Target Start/End: Complemental strand, 35038882 - 35038758
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggc 263  Q
    |||||||||||||| |||||||||| || ||| | |||||||||||||||||||||||||||| |||||| |||||||| |||||||| ||    |||||    
T  35038882 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaattgaagagggc 35038783  T
Q  264 tttttagcccggcccgtaaaagccc 288  Q
    |||||||||||||||||||||||||    
T  35038782 tttttagcccggcccgtaaaagccc 35038758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 163 - 288
Target Start/End: Original strand, 6238155 - 6238281
Alignment:
Q  163 ctagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttcc-agg 261  Q
    ||||||||||||||| |||||||||| || ||| | |||||||||||||||||||||||||||| |||||| |||||||| |||||||| |||    |||    
T  6238155 ctagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaatttgaagagg 6238254  T
Q  262 gctttttagcccggcccgtaaaagccc 288  Q
    |||||||||||||||||||||||||||    
T  6238255 gctttttagcccggcccgtaaaagccc 6238281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 163 - 288
Target Start/End: Original strand, 35838080 - 35838206
Alignment:
Q  163 ctagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttcc-agg 261  Q
    ||||||||||||||| |||||||||| || ||| | |||||||||||||||||||||||||||| |||||| |||||||| |||||||| |||    |||    
T  35838080 ctagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaatttgaatagg 35838179  T
Q  262 gctttttagcccggcccgtaaaagccc 288  Q
    |||||||||||||||||||||||||||    
T  35838180 gctttttagcccggcccgtaaaagccc 35838206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 164 - 288
Target Start/End: Original strand, 6899866 - 6899991
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttcc-aggg 262  Q
    |||||||||||||| |||||||||| || ||| | |||||||||||||||||||||||||||| |||||| |||||||| |||||||| |||    ||||    
T  6899866 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaatttgaagaggg 6899965  T
Q  263 ctttttagcccggcccgtaaaagccc 288  Q
    ||||||||||||||||||||||||||    
T  6899966 ctttttagcccggcccgtaaaagccc 6899991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 164 - 288
Target Start/End: Original strand, 21731688 - 21731812
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggc 263  Q
    |||||||||||||| |||||||||| || ||| | | |||||||||||||||||||||||||| |||||| |||||||| |||||||| ||    |||||    
T  21731688 tagagctgtcaaaatgggccgggccgtaagggccgggccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaattgaagagggc 21731787  T
Q  264 tttttagcccggcccgtaaaagccc 288  Q
    |||||||||||||||||||||||||    
T  21731788 tttttagcccggcccgtaaaagccc 21731812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 164 - 288
Target Start/End: Complemental strand, 38356155 - 38356031
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggc 263  Q
    |||||||||||||| |||||||| | || ||| | |||||||||||||||||||||||||||| |||||| |||||||| |||||||| ||    |||||    
T  38356155 tagagctgtcaaaatgggccgggtcgtaagggccggcccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaattgaagagggc 38356056  T
Q  264 tttttagcccggcccgtaaaagccc 288  Q
    |||||||||||||||||||||||||    
T  38356055 tttttagcccggcccgtaaaagccc 38356031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 199 - 290
Target Start/End: Complemental strand, 38976343 - 38976252
Alignment:
Q  199 gcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccgt 290  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| | | ||||||||||||||||||| ||||||||||    
T  38976343 gcccgaaagcccgaataaaacgtagggcttgggcctaataattgcagcccgaattttccaaaggctttttagcccggcccgaaaaagcccgt 38976252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 164 - 288
Target Start/End: Original strand, 24477257 - 24477382
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttcc-aggg 262  Q
    |||||||||||||| |||||||||| || ||| | |||||||||||||||||||||||||||| || ||| |||||||| |||||||| |||    ||||    
T  24477257 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggcttgagccgaataattggagcccgaaatttgaagaggg 24477356  T
Q  263 ctttttagcccggcccgtaaaagccc 288  Q
    ||||||||||||||||||||||||||    
T  24477357 ctttttagcccggcccgtaaaagccc 24477382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 201 - 296
Target Start/End: Complemental strand, 33908221 - 33908126
Alignment:
Q  201 ccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    ||||||||||||||||||   |||||||||||| || ||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||    
T  33908221 ccgaaagcccgaataaaacacagggcctgggccgaaaaattggagcccgaatttttctagggctttttagcccggcccgtaaaagcccgtaacccg 33908126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 167 - 288
Target Start/End: Complemental strand, 4700057 - 4699935
Alignment:
Q  167 agctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttcc-agggctt 265  Q
    ||||||||||| |||||||||| || ||| | |||||||||||||||||||||||||||  |||||| |||||||| |||||||| |||    |||||||    
T  4700057 agctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggtttgggccgaataattggagcccgaaatttgaatagggctt 4699958  T
Q  266 tttagcccggcccgtaaaagccc 288  Q
    |||||||||||||||||||||||    
T  4699957 tttagcccggcccgtaaaagccc 4699935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 164 - 289
Target Start/End: Complemental strand, 20338638 - 20338513
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggc 263  Q
    |||||||||||||| |||||||||  || ||| | ||||||||| |||||||||||||||||||| |||| |  ||| ||||||||||||||| |||||     
T  20338638 tagagctgtcaaaatgggccgggctttacgggccggcccgaaagtccgaataaaatgtagggcctaggccgataaatagcagcccgaattttttcaggga 20338539  T
Q  264 tttttagcccggcccgtaaaagcccg 289  Q
    |||||||||||| ||| |||||||||    
T  20338538 tttttagcccggtccgaaaaagcccg 20338513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 163 - 288
Target Start/End: Complemental strand, 42860446 - 42860321
Alignment:
Q  163 ctagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccaggg 262  Q
    ||||||||||||||| |||||||||| || ||| | |||||||||||||||||||||||||||  |||||| |||||||| |||||||| ||    ||||    
T  42860446 ctagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataaaatgtagggtttgggccgaataattggagcccgaaattgaagaggg 42860347  T
Q  263 ctttttagcccggcccgtaaaagccc 288  Q
     |||||||||| ||||||||||||||    
T  42860346 ttttttagcccagcccgtaaaagccc 42860321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 201 - 288
Target Start/End: Original strand, 9996251 - 9996338
Alignment:
Q  201 ccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggctttttagcccggcccgtaaaagccc 288  Q
    |||||||||||||||||||||||||| |||||| |||||||| |||||||| ||    ||||||||||||||||||||||||||||||    
T  9996251 ccgaaagcccgaataaaatgtagggcttgggccgaataattggagcccgaaattgaagagggctttttagcccggcccgtaaaagccc 9996338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 203 - 290
Target Start/End: Original strand, 31230266 - 31230353
Alignment:
Q  203 gaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccgt 290  Q
    |||||||||||||||| | |||||||||||| || |  || ||||||||||||||||||||||||||||||||||||||||| |||||    
T  31230266 gaaagcccgaataaaacgcagggcctgggccgaaaagctggagcccgaatttttccagggctttttagcccggcccgtaaaatcccgt 31230353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 164 - 254
Target Start/End: Original strand, 74953 - 75043
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaattt 254  Q
    |||||||||||||||||||  | ||||||||||| | |||||||||||||||||| ||||||| ||||||||| |||||||||||| ||||    
T  74953 tagagctgtcaaaacgggctagcccatatgggtcggtccgaaagcccgaataaaacgtagggcttgggcctaaaaattgcagcccgtattt 75043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 164 - 296
Target Start/End: Original strand, 6452985 - 6453118
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttt-tccaggg 262  Q
    |||||||||||||| || ||||| |||| | | | | | |||||| ||||||||||||||||  || ||| |||||||||||||||||||||    ||||    
T  6452985 tagagctgtcaaaatggaccgggtcatacgagccggtctgaaagctcgaataaaatgtagggtttgtgccgaataattgcagcccgaattttgaagaggg 6453084  T
Q  263 ctttttagcccggcccgtaaaagcccgttacccg 296  Q
    |||||||||||| ||||||||| ||||| |||||    
T  6453085 ctttttagcccgacccgtaaaaacccgtaacccg 6453118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 207 - 288
Target Start/End: Original strand, 36016288 - 36016369
Alignment:
Q  207 gcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggctttttagcccggcccgtaaaagccc 288  Q
    |||||||||||||||||||| |||||| |||||||| ||||| || ||    ||||||||||||||||||||||||||||||    
T  36016288 gcccgaataaaatgtagggcttgggccgaataattggagcccaaaattgaagagggctttttagcccggcccgtaaaagccc 36016369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 162 - 296
Target Start/End: Complemental strand, 26264540 - 26264406
Alignment:
Q  162 actagagctgtcaaaacgggccgggccatatgggtcagcccgaa-agcccgaataaaatgtagggcctgggcctaa-taattgcagcccgaatttttcca 259  Q
    |||||||||||||||||||||||| || |||||| | | |||   |||||||||||| | |||||| ||||||||| | |||| ||||||||||||   |    
T  26264540 actagagctgtcaaaacgggccggcccgtatgggccggtccgtttagcccgaataaa-tatagggcttgggcctaaattattg-agcccgaattttaata 26264443  T
Q  260 gggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  26264442 gggctttttagcccggcccttaaaagcccggtacccg 26264406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 202 - 290
Target Start/End: Original strand, 36866128 - 36866216
Alignment:
Q  202 cgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccgt 290  Q
    ||||||| ||||||||| |||| |  |||| | ||||| |||||||||||||||| |||||||||||| |||| |||||||||||||||    
T  36866128 cgaaagctcgaataaaacgtagagtttgggtcgaataagtgcagcccgaattttttcagggctttttatcccgacccgtaaaagcccgt 36866216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 164 - 296
Target Start/End: Complemental strand, 7949874 - 7949742
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccg-aaagcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagg 261  Q
    ||||||||||||||||||||||||| |||||| |||||||   ||||||||| |||| |||||  ||||||||| | |||| ||||| ||||||   |||    
T  7949874 tagagctgtcaaaacgggccgggccgtatgggccagcccgtttagcccgaat-aaatatagggtttgggcctaaaatattg-agcccaaattttaatagg 7949777  T
Q  262 gctttttagcccggcccgtaaaagcccgttacccg 296  Q
    | ||||||||||||||| |||||||||| ||||||    
T  7949776 gttttttagcccggcccttaaaagcccggtacccg 7949742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 201 - 255
Target Start/End: Original strand, 17085407 - 17085461
Alignment:
Q  201 ccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttt 255  Q
    ||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||    
T  17085407 ccgaaagcccgaataaaatgtagggtctgggccgaataattgaagcccgaatttt 17085461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 164 - 289
Target Start/End: Complemental strand, 38986735 - 38986610
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggc 263  Q
    |||||||||||||||||||  | ||  ||||| | | |||  |||| || |||||  |||||| |||||  || |||| ||||||||||||||| |||||    
T  38986735 tagagctgtcaaaacgggctagcccgaatgggccggaccgttagcctgagtaaaacttagggcttgggctcaaaaatttcagcccgaatttttctagggc 38986636  T
Q  264 tttttagcccggcccgtaaaagcccg 289  Q
    |||||||||||||||| |||||||||    
T  38986635 tttttagcccggcccgaaaaagcccg 38986610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 199 - 284
Target Start/End: Complemental strand, 1398456 - 1398370
Alignment:
Q  199 gcccgaaagcccgaataaaat-gtagggcctgggcctaataattgcagcccgaatttttccagggctttttagcccggcccgtaaaa 284  Q
    ||||||||||||||| ||||  ||||||| ||||||||| ||| |||||||||||||    |||||||||| |||||||||||||||    
T  1398456 gcccgaaagcccgaaaaaaaacgtagggcttgggcctaaaaatggcagcccgaatttaaatagggctttttggcccggcccgtaaaa 1398370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 164 - 296
Target Start/End: Original strand, 26507198 - 26507330
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaa-agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagg 261  Q
    ||||||||||||||||||| || ||||||||| | |||||   |||||||||||| | |||||| |||||| || | |||| |||| |||||||   |||    
T  26507198 tagagctgtcaaaacgggcaggcccatatgggccggcccgtttagcccgaataaa-tatagggcttgggccgaaaatattg-agcctgaattttgatagg 26507295  T
Q  262 gctttttagcccggcccgtaaaagcccgttacccg 296  Q
    ||||||||||||||||| |||||||||| ||||||    
T  26507296 gctttttagcccggcccttaaaagcccggtacccg 26507330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 201 - 286
Target Start/End: Complemental strand, 40917999 - 40917914
Alignment:
Q  201 ccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggctttttagcccggcccgtaaaagc 286  Q
    ||||||||||||||||||||||||| ||| ||  |  ||| ||||||||||||||| ||| ||||||||||| |||| | ||||||    
T  40917999 ccgaaagcccgaataaaatgtagggtctgagctgataaatagcagcccgaattttttcagagctttttagcctggcctgaaaaagc 40917914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 201 - 289
Target Start/End: Complemental strand, 3436813 - 3436725
Alignment:
Q  201 ccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccg 289  Q
    ||||||| | ||||||||||||||| || |||| |  ||| || ||||||||||||  |||||||||||||||||| || |||||||||    
T  3436813 ccgaaagtctgaataaaatgtagggtcttggccaataaatagctgcccgaatttttttagggctttttagcccggctcgaaaaagcccg 3436725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 206 - 296
Target Start/End: Complemental strand, 2466411 - 2466322
Alignment:
Q  206 agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    |||||||||||| | |||||| ||||||||| | |||| ||||||||||||   |||||||||||||||||||| |||||||||| ||||||    
T  2466411 agcccgaataaa-tatagggcttgggcctaaaatattg-agcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccg 2466322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 238 - 289
Target Start/End: Original strand, 3296166 - 3296217
Alignment:
Q  238 aattgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccg 289  Q
    |||||||||||||||| || |||||||||||||||||||||  |||||||||    
T  3296166 aattgcagcccgaattgtttcagggctttttagcccggcccaaaaaagcccg 3296217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 4975876 - 4975801
Alignment:
Q  214 taaaatgtagggcctgggcctaataattgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccg 289  Q
    ||||| ||||||  ||||||||||||||| ||| |||||||||| | | ||||||||||||| ||| |||||||||    
T  4975876 taaaacgtagggtttgggcctaataattgtagctcgaatttttctaagactttttagcccggtccgaaaaagcccg 4975801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 206 - 296
Target Start/End: Complemental strand, 28759475 - 28759386
Alignment:
Q  206 agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    |||||||||||| | |||||| ||||||||| | |||| ||||||||||||   |||||||||||||||||||| |||||||||| ||||||    
T  28759475 agcccgaataaa-tatagggcttgggcctaaaatattg-agcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccg 28759386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 296
Target Start/End: Complemental strand, 5361319 - 5361187
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaa-agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagg 261  Q
    |||||||||||||| ||| |||||| |||||| | |||||   |||||||||||| | |||||| ||||||||| | |||| ||||||||||||   |||    
T  5361319 tagagctgtcaaaatgggtcgggccgtatgggccggcccgtttagcccgaataaa-tatagggcttgggcctaaaatattg-agcccgaattttaatagg 5361222  T
Q  262 gctttttagcccggcccgtaaaagcccgttacccg 296  Q
    ||||||||||||||||  ||||||| || ||||||    
T  5361221 gctttttagcccggccgttaaaagcacggtacccg 5361187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 164
Target Start/End: Complemental strand, 39595460 - 39595422
Alignment:
Q  126 atttgagtaatgatatttgaacaaccatttcatacaact 164  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  39595460 atttgagtaatgatatttgaacaaccatttgatacaact 39595422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 1845416 - 1845468
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataa 216  Q
    |||||||||||||| |||||||||| || ||| | ||||||||||||||||||    
T  1845416 tagagctgtcaaaatgggccgggccgtaagggccggcccgaaagcccgaataa 1845468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 3141680 - 3141644
Alignment:
Q  128 ttgagtaatgatatttgaacaaccatttcatacaact 164  Q
    ||||||| |||||||||||||||||||||||||||||    
T  3141680 ttgagtagtgatatttgaacaaccatttcatacaact 3141644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 244 - 296
Target Start/End: Original strand, 20122749 - 20122801
Alignment:
Q  244 agcccgaatttttccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    ||||||||||||   |||||||||||||||||||| |||||||||| ||||||    
T  20122749 agcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccg 20122801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 164
Target Start/End: Complemental strand, 16202908 - 16202869
Alignment:
Q  125 tatttgagtaatgatatttgaacaaccatttcatacaact 164  Q
    |||||||||| |||||||||||||| ||||||||||||||    
T  16202908 tatttgagtagtgatatttgaacaatcatttcatacaact 16202869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 130 - 164
Target Start/End: Original strand, 6515328 - 6515362
Alignment:
Q  130 gagtaatgatatttgaacaaccatttcatacaact 164  Q
    ||||| |||||||||||||||||||||||||||||    
T  6515328 gagtagtgatatttgaacaaccatttcatacaact 6515362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 130 - 164
Target Start/End: Complemental strand, 42699231 - 42699197
Alignment:
Q  130 gagtaatgatatttgaacaaccatttcatacaact 164  Q
    ||||||||||||||||||||| |||||||||||||    
T  42699231 gagtaatgatatttgaacaactatttcatacaact 42699197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 288
Target Start/End: Original strand, 1845488 - 1845517
Alignment:
Q  259 agggctttttagcccggcccgtaaaagccc 288  Q
    ||||||||||||||||||||||||||||||    
T  1845488 agggctttttagcccggcccgtaaaagccc 1845517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 162
Target Start/End: Original strand, 40223673 - 40223706
Alignment:
Q  129 tgagtaatgatatttgaacaaccatttcatacaa 162  Q
    |||||| |||||||||||||||||||||||||||    
T  40223673 tgagtagtgatatttgaacaaccatttcatacaa 40223706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 206 - 289
Target Start/End: Complemental strand, 1840650 - 1840568
Alignment:
Q  206 agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccg 289  Q
    |||||||||||| | |||||| ||||||||| | |||| ||||||||||||   |||||||||||||||| ||| ||||||||||    
T  1840650 agcccgaataaa-tatagggcttgggcctaaaatattg-agcccgaattttaatagggctttttagcccgacccttaaaagcccg 1840568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 8955546 - 8955574
Alignment:
Q  130 gagtaatgatatttgaacaaccatttcat 158  Q
    |||||||||||||||||||||||||||||    
T  8955546 gagtaatgatatttgaacaaccatttcat 8955574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 244 - 296
Target Start/End: Original strand, 16748996 - 16749048
Alignment:
Q  244 agcccgaatttttccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    ||||||||||||   |||||||||| ||||||||| |||||||||| ||||||    
T  16748996 agcccgaattttaatagggcttttttgcccggcccttaaaagcccgatacccg 16749048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 244 - 296
Target Start/End: Original strand, 17016524 - 17016576
Alignment:
Q  244 agcccgaatttttccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    ||||||||||||   ||||||||||||||||||||  ||||||||| ||||||    
T  17016524 agcccgaattttaatagggctttttagcccggccctaaaaagcccgctacccg 17016576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 244 - 296
Target Start/End: Complemental strand, 27345331 - 27345279
Alignment:
Q  244 agcccgaatttttccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    ||||||||||||   |||||||||||||||||||| ||||||| || ||||||    
T  27345331 agcccgaattttaatagggctttttagcccggcccttaaaagctcggtacccg 27345279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 136 - 164
Target Start/End: Original strand, 31284289 - 31284317
Alignment:
Q  136 tgatatttgaacaaccatttcatacaact 164  Q
    |||||||||||||||||||||||||||||    
T  31284289 tgatatttgaacaaccatttcatacaact 31284317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 66; Significance: 6e-29; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 164 - 296
Target Start/End: Original strand, 6139 - 6272
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagc-ccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccaggg 262  Q
    |||||||||||||| |||||||||  || ||| | |  |||| |||||||||||||||||||||||||||  ||||||||||| |||||||||| |||||    
T  6139 tagagctgtcaaaatgggccgggctttacgggcctgggccgatagcccgaataaaatgtagggcctgggcggaataattgcagtccgaattttttcaggg 6238  T
Q  263 ctttttagcccggcccgtaaaagcccgttacccg 296  Q
    ||||||||||||||||| ||||| |||| |||||    
T  6239 ctttttagcccggcccgcaaaagtccgtaacccg 6272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 164 - 256
Target Start/End: Original strand, 3654 - 3747
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagc-ccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaattttt 256  Q
    |||||||||||||| |||||||||  || ||| | |  |||| | ||||||||||||| |||| ||||||| ||||||||||| ||||||||||    
T  3654 tagagctgtcaaaatgggccgggctttacgggcctgtgccgataacccgaataaaatgcagggtctgggccgaataattgcagtccgaattttt 3747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1449 (Bit Score: 64; Significance: 9e-28; HSPs: 1)
Name: scaffold1449
Description:

Target: scaffold1449; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 161 - 260
Target Start/End: Complemental strand, 1680 - 1581
Alignment:
Q  161 aactagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccag 260  Q
    ||||||||||||||||||||||||| || |||||| | |||||||||||||||||||||||||||  ||||| ||||||||  |||||||||||||||||    
T  1680 aactagagctgtcaaaacgggccggcccgtatgggccggcccgaaagcccgaataaaatgtagggtttgggcttaataattttagcccgaatttttccag 1581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 163 - 288
Target Start/End: Complemental strand, 16770 - 16645
Alignment:
Q  163 ctagagctgtcaaaacgggccgggccatatgggtcagcccgaaagcccgaataaaatgtagggcctgggcctaataattgcagcccgaatttttccaggg 262  Q
    ||||||||||||||| |||||||||| || ||  | | | |||||||||||||||||||||||| |||||| |||||||| |||||||| ||    ||||    
T  16770 ctagagctgtcaaaatgggccgggccgtaaggtccggtctgaaagcccgaataaaatgtagggcttgggccgaataattgtagcccgaaattgaagaggg 16671  T
Q  263 ctttttagcccggcccgtaaaagccc 288  Q
    ||||||||||||||||||||||||||    
T  16670 ctttttagcccggcccgtaaaagccc 16645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 206 - 296
Target Start/End: Complemental strand, 7888 - 7799
Alignment:
Q  206 agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    |||||||||||| | |||||| ||||||||| | |||| ||||||||||||   |||||||||||||||||||| |||||||||| ||||||    
T  7888 agcccgaataaa-tatagggcttgggcctaaaatattg-agcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccg 7799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 162 - 296
Target Start/End: Original strand, 56193 - 56326
Alignment:
Q  162 actagagctgtcaaaacgggccgggccatatgggtcagcccgaa-agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttcca 259  Q
    |||||||||||||||||||||| |||| |||||| | |||||   | |||||||||| | |||||  ||||||||| | |||| ||||||||||||   |    
T  56193 actagagctgtcaaaacgggccaggccgtatgggccggcccgtttatcccgaataaa-tatagggt-tgggcctaaaatattg-agcccgaattttaata 56289  T
Q  260 gggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    ||||||||||||||||||| ||||| |||| ||||||    
T  56290 gggctttttagcccggcccttaaaatcccggtacccg 56326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1243 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1243
Description:

Target: scaffold1243; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 296
Target Start/End: Original strand, 1975 - 2108
Alignment:
Q  163 ctagagctgtcaaaacgggccgggccatatgggtcagcccg-aaagcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccag 260  Q
    ||||||||||||||||||| |||| | |||||| |||||||   ||||||||| |||| |||||| ||||||||| | |||| || |||||||||   ||    
T  1975 ctagagctgtcaaaacgggtcgggtcgtatgggccagcccgtttagcccgaat-aaatatagggcttgggcctaaaatattg-agtccgaattttaatag 2072  T
Q  261 ggctttttagcccggcccgtaaaagcccgttacccg 296  Q
    |||| ||||||||| ||| || ||||||| ||||||    
T  2073 ggctatttagcccgacccttataagcccggtacccg 2108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 288
Target Start/End: Complemental strand, 22048 - 21967
Alignment:
Q  206 agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagggctttttagcccggcccgtaaaagccc 288  Q
    |||||||||||| | |||||| ||||||||| | |||| ||||||||||||   |||||||||||||||||||| |||||||||    
T  22048 agcccgaataaa-tatagggcttgggcctaaaatattg-agcccgaattttaatagggctttttagcccggcccttaaaagccc 21967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 296
Target Start/End: Original strand, 27587 - 27719
Alignment:
Q  164 tagagctgtcaaaacgggccgggccatatgggtcagcccgaa-agcccgaataaaatgtagggcctgggcctaata-attgcagcccgaatttttccagg 261  Q
    |||||||||||||||||||||| || |||||| | |||||   |||||||||||| | ||||   |||| |||| | |||| ||||||||||||   |||    
T  27587 tagagctgtcaaaacgggccggtccgtatgggccggcccgtttagcccgaataaa-tataggatttgggtctaaaatattg-agcccgaattttaatagg 27684  T
Q  262 gctttttagcccggcccgtaaaagcccgttacccg 296  Q
    ||||||| ||||||||| |||||||||| ||||||    
T  27685 gctttttcgcccggcccttaaaagcccggtacccg 27719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 162
Target Start/End: Complemental strand, 27522 - 27490
Alignment:
Q  130 gagtaatgatatttgaacaaccatttcatacaa 162  Q
    ||||| |||||||||||||||||||||||||||    
T  27522 gagtagtgatatttgaacaaccatttcatacaa 27490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 162
Target Start/End: Complemental strand, 396044 - 396012
Alignment:
Q  130 gagtaatgatatttgaacaaccatttcatacaa 162  Q
    ||||| |||||||||||||||||||||||||||    
T  396044 gagtagtgatatttgaacaaccatttcatacaa 396012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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