View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8203_low_5 (Length: 379)

Name: NF8203_low_5
Description: NF8203
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8203_low_5
NF8203_low_5
[»] chr7 (49 HSPs)
chr7 (9-191)||(11685331-11685513)
chr7 (61-361)||(45464683-45464983)
chr7 (215-367)||(11684057-11684209)
chr7 (61-361)||(4321375-4321673)
chr7 (58-191)||(34784308-34784441)
chr7 (16-367)||(38614327-38614669)
chr7 (62-367)||(2168343-2168649)
chr7 (61-361)||(34692250-34692554)
chr7 (61-361)||(48302444-48302744)
chr7 (61-290)||(1547241-1547467)
chr7 (57-342)||(3690440-3690725)
chr7 (61-170)||(30108857-30108966)
chr7 (61-367)||(23954794-23955099)
chr7 (200-361)||(30109024-30109185)
chr7 (76-367)||(46994970-46995261)
chr7 (60-342)||(36756398-36756681)
chr7 (60-342)||(36762195-36762478)
chr7 (61-132)||(19712014-19712085)
chr7 (60-191)||(36766074-36766205)
chr7 (76-190)||(40785216-40785330)
chr7 (57-191)||(46810995-46811129)
chr7 (57-171)||(7403476-7403590)
chr7 (63-191)||(8421712-8421840)
chr7 (58-176)||(13036191-13036309)
chr7 (57-191)||(45360929-45361062)
chr7 (6-83)||(19712098-19712175)
chr7 (63-191)||(35342722-35342850)
chr7 (59-191)||(37791965-37792097)
chr7 (58-192)||(23904917-23905052)
chr7 (61-191)||(6605032-6605162)
chr7 (57-191)||(13169302-13169435)
chr7 (57-191)||(39857999-39858133)
chr7 (61-191)||(47384608-47384738)
chr7 (200-305)||(48705396-48705499)
chr7 (262-347)||(40785079-40785164)
chr7 (119-191)||(48850929-48851001)
chr7 (58-113)||(12904046-12904101)
chr7 (58-176)||(48311427-48311543)
chr7 (57-147)||(3921007-3921096)
chr7 (161-248)||(12903939-12904026)
chr7 (61-191)||(38549845-38549975)
chr7 (58-190)||(22155495-22155626)
chr7 (58-190)||(22211410-22211541)
chr7 (59-191)||(38472573-38472705)
chr7 (58-189)||(34775362-34775493)
chr7 (224-278)||(8421867-8421921)
chr7 (6-52)||(34784243-34784289)
chr7 (69-125)||(27956933-27956988)
chr7 (58-94)||(48227707-48227743)
[»] chr3 (39 HSPs)
chr3 (57-365)||(26448037-26448342)
chr3 (59-279)||(30501391-30501610)
chr3 (61-265)||(40962981-40963184)
chr3 (59-367)||(1847154-1847462)
chr3 (61-361)||(41945600-41945898)
chr3 (59-355)||(32842721-32843017)
chr3 (65-291)||(49494787-49495011)
chr3 (57-358)||(48634872-48635173)
chr3 (57-346)||(24382004-24382293)
chr3 (61-176)||(37865676-37865791)
chr3 (76-338)||(31885827-31886088)
chr3 (57-191)||(2975749-2975883)
chr3 (61-170)||(33051144-33051253)
chr3 (159-367)||(33112233-33112441)
chr3 (233-361)||(37886239-37886367)
chr3 (157-361)||(23775149-23775353)
chr3 (57-367)||(35861831-35862141)
chr3 (215-367)||(45897487-45897640)
chr3 (229-367)||(2975887-2976024)
chr3 (57-342)||(18429030-18429314)
chr3 (57-342)||(45255773-45256058)
chr3 (76-342)||(33851291-33851555)
chr3 (58-191)||(2378576-2378709)
chr3 (58-191)||(42282135-42282268)
chr3 (76-283)||(10380511-10380719)
chr3 (57-191)||(610850-610984)
chr3 (61-191)||(51686013-51686143)
chr3 (58-191)||(17516608-17516741)
chr3 (58-191)||(21350257-21350390)
chr3 (58-191)||(30598658-30598791)
chr3 (57-189)||(44268301-44268432)
chr3 (314-360)||(13466609-13466655)
chr3 (57-191)||(23887489-23887622)
chr3 (57-191)||(27897512-27897646)
chr3 (58-191)||(23875963-23876095)
chr3 (58-183)||(45897342-45897467)
chr3 (57-191)||(23291889-23292023)
chr3 (6-52)||(30501321-30501367)
chr3 (314-367)||(22218719-22218772)
[»] chr2 (29 HSPs)
chr2 (61-361)||(11021825-11022125)
chr2 (61-361)||(28247674-28247974)
chr2 (61-191)||(363354-363485)
chr2 (61-350)||(11313127-11313402)
chr2 (61-361)||(38149535-38149836)
chr2 (61-191)||(7744932-7745062)
chr2 (59-366)||(10715400-10715690)
chr2 (58-191)||(17948601-17948734)
chr2 (57-361)||(37418263-37418569)
chr2 (61-367)||(35575-35881)
chr2 (61-184)||(2359394-2359516)
chr2 (58-361)||(42880309-42880610)
chr2 (57-191)||(34400628-34400762)
chr2 (57-191)||(42517877-42518011)
chr2 (63-191)||(15373554-15373683)
chr2 (158-318)||(40150664-40150825)
chr2 (57-269)||(40152135-40152346)
chr2 (58-190)||(17697776-17697903)
chr2 (57-191)||(19907036-19907170)
chr2 (224-342)||(42002990-42003108)
chr2 (63-191)||(41708097-41708225)
chr2 (77-191)||(26581316-26581430)
chr2 (57-138)||(16377082-16377163)
chr2 (58-113)||(4047703-4047758)
chr2 (34-72)||(363509-363547)
chr2 (58-99)||(161813-161854)
chr2 (58-103)||(2359542-2359587)
chr2 (119-191)||(14387765-14387837)
chr2 (63-191)||(31474719-31474847)
[»] chr1 (26 HSPs)
chr1 (61-361)||(5784366-5784666)
chr1 (58-367)||(42558248-42558546)
chr1 (61-291)||(51123115-51123342)
chr1 (61-361)||(11152837-11153136)
chr1 (74-191)||(25172701-25172818)
chr1 (57-367)||(31803190-31803500)
chr1 (57-367)||(46637056-46637365)
chr1 (57-342)||(45379374-45379658)
chr1 (63-342)||(44158807-44159088)
chr1 (57-342)||(42135761-42136045)
chr1 (57-189)||(6576774-6576906)
chr1 (224-367)||(18183063-18183205)
chr1 (57-342)||(35478378-35478660)
chr1 (57-191)||(50554500-50554634)
chr1 (57-188)||(33679549-33679680)
chr1 (57-191)||(31237139-31237273)
chr1 (58-191)||(18058121-18058254)
chr1 (61-191)||(15105986-15106116)
chr1 (58-191)||(6817200-6817333)
chr1 (108-190)||(18180818-18180900)
chr1 (58-191)||(45045232-45045365)
chr1 (76-191)||(27952167-27952282)
chr1 (57-191)||(2870712-2870845)
chr1 (57-191)||(3012175-3012309)
chr1 (224-342)||(33679696-33679814)
chr1 (61-99)||(33599542-33599580)
[»] chr8 (46 HSPs)
chr8 (6-191)||(11031643-11031828)
chr8 (61-361)||(40019448-40019748)
chr8 (58-269)||(25356622-25356834)
chr8 (57-367)||(33369050-33369362)
chr8 (70-361)||(28432520-28432810)
chr8 (58-367)||(9876053-9876361)
chr8 (61-191)||(10269206-10269336)
chr8 (57-347)||(461467-461756)
chr8 (61-347)||(33158951-33159236)
chr8 (61-191)||(9186302-9186432)
chr8 (58-356)||(38881691-38881992)
chr8 (61-191)||(10268093-10268223)
chr8 (61-291)||(44620244-44620472)
chr8 (57-342)||(1321829-1322115)
chr8 (57-189)||(10770636-10770768)
chr8 (58-163)||(25373335-25373440)
chr8 (57-138)||(25705571-25705652)
chr8 (57-312)||(42895061-42895317)
chr8 (61-191)||(15684048-15684178)
chr8 (58-164)||(25402504-25402610)
chr8 (58-164)||(25707013-25707119)
chr8 (86-191)||(12515395-12515499)
chr8 (57-176)||(11719746-11719865)
chr8 (57-124)||(25370798-25370865)
chr8 (224-367)||(33748793-33748935)
chr8 (58-191)||(17807313-17807446)
chr8 (57-367)||(31822975-31823276)
chr8 (60-191)||(11790496-11790627)
chr8 (57-191)||(32823938-32824072)
chr8 (200-345)||(25371636-25371781)
chr8 (6-81)||(9186447-9186522)
chr8 (57-176)||(24527184-24527303)
chr8 (57-175)||(37525149-37525267)
chr8 (57-191)||(41041032-41041166)
chr8 (58-191)||(13484831-13484964)
chr8 (262-347)||(37525333-37525418)
chr8 (157-269)||(8655640-8655752)
chr8 (58-191)||(41824261-41824394)
chr8 (63-191)||(31199781-31199909)
chr8 (76-191)||(33748644-33748759)
chr8 (314-367)||(11719994-11720047)
chr8 (58-191)||(22273535-22273668)
chr8 (59-191)||(29693963-29694095)
chr8 (295-342)||(32823816-32823863)
chr8 (314-367)||(11790317-11790370)
chr8 (329-361)||(42895321-42895353)
[»] chr4 (36 HSPs)
chr4 (61-361)||(39922506-39922806)
chr4 (61-361)||(39084651-39084951)
chr4 (61-361)||(39190318-39190618)
chr4 (61-361)||(42879576-42879876)
chr4 (61-361)||(43778681-43778979)
chr4 (61-361)||(5485551-5485851)
chr4 (61-360)||(44993100-44993399)
chr4 (62-191)||(13438146-13438275)
chr4 (61-361)||(32653130-32653430)
chr4 (72-257)||(25994708-25994897)
chr4 (61-191)||(230740-230869)
chr4 (57-367)||(4519959-4520270)
chr4 (76-342)||(44556917-44557183)
chr4 (118-190)||(39294553-39294625)
chr4 (57-341)||(27626246-27626530)
chr4 (58-347)||(51041027-51041314)
chr4 (59-171)||(28100865-28100977)
chr4 (59-191)||(13449984-13450107)
chr4 (57-191)||(2691684-2691818)
chr4 (58-191)||(20820290-20820423)
chr4 (57-335)||(35997284-35997568)
chr4 (8-84)||(39294645-39294721)
chr4 (63-191)||(47942413-47942541)
chr4 (58-191)||(54387537-54387670)
chr4 (253-360)||(10544498-10544605)
chr4 (76-191)||(44793243-44793358)
chr4 (57-191)||(11254378-11254512)
chr4 (63-148)||(10544693-10544778)
chr4 (57-138)||(26397635-26397715)
chr4 (58-191)||(49524394-49524527)
chr4 (57-191)||(35402069-35402202)
chr4 (327-367)||(27385940-27385980)
chr4 (6-84)||(230650-230728)
chr4 (206-367)||(28101018-28101179)
chr4 (58-95)||(42982211-42982248)
chr4 (58-94)||(20494146-20494182)
[»] chr6 (12 HSPs)
chr6 (61-361)||(17950853-17951152)
chr6 (61-361)||(35174674-35174974)
chr6 (59-355)||(17936042-17936339)
chr6 (61-361)||(34344824-34345123)
chr6 (61-189)||(4289710-4289838)
chr6 (10-183)||(31210129-31210313)
chr6 (57-191)||(33277101-33277234)
chr6 (58-191)||(7371453-7371586)
chr6 (59-183)||(30639903-30640027)
chr6 (57-176)||(11356803-11356922)
chr6 (61-138)||(33267342-33267419)
chr6 (71-147)||(14337985-14338061)
[»] chr5 (33 HSPs)
chr5 (57-191)||(1344478-1344612)
chr5 (61-361)||(42619581-42619875)
chr5 (61-186)||(24497749-24497874)
chr5 (57-367)||(18726853-18727164)
chr5 (57-359)||(38176923-38177225)
chr5 (57-359)||(38204147-38204449)
chr5 (61-367)||(35291343-35291644)
chr5 (76-367)||(40330004-40330296)
chr5 (57-367)||(32089411-32089725)
chr5 (59-191)||(1343482-1343614)
chr5 (61-291)||(27350095-27350322)
chr5 (214-367)||(43317176-43317329)
chr5 (76-361)||(32836186-32836470)
chr5 (57-291)||(6116465-6116700)
chr5 (215-367)||(18341593-18341745)
chr5 (57-191)||(18623765-18623899)
chr5 (57-191)||(32134556-32134690)
chr5 (76-339)||(35400226-35400489)
chr5 (58-191)||(34328466-34328600)
chr5 (58-191)||(12738337-12738470)
chr5 (58-191)||(12801160-12801293)
chr5 (58-191)||(27077123-27077256)
chr5 (58-191)||(33257426-33257559)
chr5 (320-367)||(33257262-33257309)
chr5 (6-68)||(24497885-24497947)
chr5 (70-188)||(41494167-41494285)
chr5 (57-138)||(30464263-30464344)
chr5 (58-138)||(28035772-28035852)
chr5 (314-361)||(27076963-27077010)
chr5 (57-147)||(28821770-28821860)
chr5 (61-95)||(29620495-29620529)
chr5 (59-95)||(8541036-8541072)
chr5 (58-138)||(19998149-19998229)
[»] scaffold0006 (1 HSPs)
scaffold0006 (63-291)||(37856-38082)
[»] scaffold0070 (1 HSPs)
scaffold0070 (57-278)||(57669-57890)
[»] scaffold1041 (2 HSPs)
scaffold1041 (57-124)||(2643-2710)
scaffold1041 (57-124)||(2356-2423)
[»] scaffold0722 (1 HSPs)
scaffold0722 (57-186)||(4446-4574)
[»] scaffold0564 (1 HSPs)
scaffold0564 (58-191)||(9533-9666)
[»] scaffold0345 (1 HSPs)
scaffold0345 (57-176)||(1164-1283)


Alignment Details
Target: chr7 (Bit Score: 147; Significance: 2e-77; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 9 - 191
Target Start/End: Complemental strand, 11685513 - 11685331
Alignment:
Q  9 gaccaaaatttccaaggatcaaattaattgatttgtagaaaatgctttgctctttcttcctcaaatatataaaattggaaccctaattttacaatatgta 108  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||    
T  11685513 gaccaaaatttccaaggatcaaattgattgatttgtagaaaatgctttgctctttctcccccaaatatataaaattggaaccctaattttacaatctgta 11685414  T
Q  109 atctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagcttcaaaccctaat 191  Q
    ||||||||||||||||  ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||    
T  11685413 atctacactccaaaatctccaaaatttctttcaataattagaggtaacgttcttcaccaattcaaaaagcttcaaaacctaat 11685331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 61 - 361
Target Start/End: Complemental strand, 45464983 - 45464683
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 160  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||  ||||| ||||||||||||||||  ||| ||||||    
T  45464983 tttcttcctcaaatatataaaattggaactctaattttacaatgtgtaatctacactccaaaatctccaaattttctttcaataattaagggtcacgttc 45464884  T
Q  161 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 260  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||| | |||| || ||||||||    
T  45464883 ttccccaaatcaaaaaattacaaaccctaattttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaatactgttgaaattgaatct 45464784  T
Q  261 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 360  Q
     |||||||| | |||||   || ||||||||  |  ||| |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||    
T  45464783 aaaatgatgggaggtggtcatatgggcaaaaagagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 45464684  T
Q  361 g 361  Q
    |    
T  45464683 g 45464683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 215 - 367
Target Start/End: Complemental strand, 11684209 - 11684057
Alignment:
Q  215 caaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaa-gcaattatgaaagtcaagcttt 313  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||| |||||     
T  11684209 caaaatccccaaaatttcttcaagcaaaattgttcaatttgaatccgaaatgatgaggggtgg-tgtaagggcaaaaagcaattatgaaagtcgagcttc 11684111  T
Q  314 atctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 367  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  11684110 atctttaagctccatgtttaatggtgatgtgagagtacttgaatgttggtgtcc 11684057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 61 - 361
Target Start/End: Original strand, 4321375 - 4321673
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 160  Q
    |||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||  | ||| |||||| |||||||||  ||| ||||||    
T  4321375 tttcatccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctcaaaattttcttccaataattaagggtcacgttc 4321474  T
Q  161 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 260  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||||| | || || ||||||||    
T  4321475 ttccccaaatcaaaaaattgcaaaccctaat-ttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactattgaaattgaatct 4321573  T
Q  261 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 360  Q
     |||||||| |||||||   || ||||||||  |  ||| |||||||||||| ||||| |  |||||||||||||| |||||||||||||||||||||||    
T  4321574 aaaatgatg-ggggtggtcatatgggcaaaaagagctatcaaagtcaagcttcatcttcatcctccatgtttaatgttgatgtgagagtgcttgaatgtt 4321672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 58 - 191
Target Start/End: Original strand, 34784308 - 34784441
Alignment:
Q  58 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 157  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||||||||||||  ||||||||| | |||||||||||||||||||    
T  34784308 ctctttcttccccaaatatataaaattggaaccctaattttacaatctttaatctacactccaaaatctccaaaatttatgtcaataattagtggtaacg 34784407  T
Q  158 ttcttccccaattcaaaaagcttcaaaccctaat 191  Q
    ||||||||||||||||||| || |||||||||||    
T  34784408 ttcttccccaattcaaaaaactccaaaccctaat 34784441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 16 - 367
Target Start/End: Complemental strand, 38614669 - 38614327
Alignment:
Q  16 atttccaaggatcaaattaattgatttgtagaaaatgctttgctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctaca 115  Q
    ||||| |||||  ||||| ||||||||| |||||||| ||||  ||||||||| ||  | ||||||||||||| |||||||  ||||| || ||||||      
T  38614669 atttcaaaggactaaattgattgatttgcagaaaatgttttgg-ctttcttccccagctgtataaaattggaatcctaattacacaatctgcaatcta-- 38614573  T
Q  116 ctccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattc 215  Q
         ||||  |||||||||| | ||||||| ||||||   ||||||| || ||||||||| ||||||||||||||        |||||||| ||||  |    
T  38614572 -----aaatcaccaaaatttcctccaataataagtggtccagttcttctccgattcaaaaaacttcaaaccctaattttttcgtattgaatctgaaagcc 38614478  T
Q  216 aaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttat 315  Q
    ||||||  ||||||||||| |||||||| | || || ||||||||||||||||| ||||||||  || ||| |||| || ||||||||||| ||||| ||    
T  38614477 aaaatcctcaaaatttcttgaagcaaaactattgaaattgaatctgaaatgatg-ggggtgggaatatgggaaaaaacagttatgaaagtcgagcttcat 38614379  T
Q  316 ctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 367  Q
    ||| |||||||| || |||||||||||||||||||||| ||||||| |||||    
T  38614378 cttcaagctccaagtctaatggtgatgtgagagtgcttaaatgttggtgtcc 38614327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 62 - 367
Target Start/End: Complemental strand, 2168649 - 2168343
Alignment:
Q  62 ttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttct 161  Q
    ||||||| ||| | |||||||||| ||||||||||  ||||| || ||||||||||| |||||  |||||||||| | ||||||| ||| ||   |||||    
T  2168649 ttcttccccaattgtataaaattgtaaccctaattacacaatctgcaatctacactctaaaatcaccaaaatttcctccaataataagtagtccagttct 2168550  T
Q  162 tccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctg 261  Q
    || |||||||||||| ||||||||||||||        |||||||| ||||  |||||||  ||||||||||| |||||||| | || || ||||||||     
T  2168549 tctccaattcaaaaaacttcaaaccctaattttttcgtattgaatctgaaagccaaaatcctcaaaatttcttgaagcaaaactattgaaattgaatcta 2168450  T
Q  262 aaatgatgaggggtgggtgtaaggg--caaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgt 359  Q
    |||||||| ||||||||  || |||   ||||  | ||||||||||| ||||||||||| |||||||| ||||||||||||||| ||||||||  |||||    
T  2168449 aaatgatg-ggggtgggaatatgggaaaaaaaatagttatgaaagtcgagctttatcttcaagctccaagtttaatggtgatgtcagagtgctcaaatgt 2168351  T
Q  360 tgatgtcc 367  Q
    || |||||    
T  2168350 tggtgtcc 2168343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 61 - 361
Target Start/End: Complemental strand, 34692554 - 34692250
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 160  Q
    |||||||| |||||||||||||||||||||||||||||||||| | ||||||||||||||||||  ||||| |||||| |||||||||||||| ||||||    
T  34692554 tttcttccccaaatatataaaattggaaccctaattttacaatgtttaatctacactccaaaatctccaaattttcttccaataattagtggtcacgttc 34692455  T
Q  161 ttccccaattcaaaaagcttcaaacc-ctaa----tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttg 255  Q
    |||||||| |||||||  | |||||| ||||    |        |||||||| ||||  |||||||  |||||||  ||||||||||| | || || |||    
T  34692454 ttccccaaatcaaaaaattccaaaccactaatttttttttttttattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactattgaaattg 34692355  T
Q  256 aatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttga 355  Q
    ||||| |||||||| ||||| |   || ||||||||  |  ||| |||||||||||| ||||| |  || |||||||||| ||||||||||| |||||||    
T  34692354 aatctaaaatgatg-ggggtagtcatatgggcaaaaagagctatcaaagtcaagcttcatcttcatcctacatgtttaatagtgatgtgagaatgcttga 34692256  T
Q  356 atgttg 361  Q
    ||||||    
T  34692255 atgttg 34692250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 61 - 361
Target Start/End: Original strand, 48302444 - 48302744
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 160  Q
    |||||||| |||||||||||||||| ||| ||||||||||||| |||| |||||||||||||||  ||||| || ||| |||||||||   || ||||||    
T  48302444 tttcttccccaaatatataaaattgaaactctaattttacaatgtgtattctacactccaaaatctccaaatttgcttccaataattaagagtcacgttc 48302543  T
Q  161 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 260  Q
    |||||||| |||||||  | |||||||||||        |||||||  ||||  |||||||  |||||||  ||||||||||| |||| || ||||| |     
T  48302544 ttccccaaatcaaaaaattgcaaaccctaattttttttaattgaatatgaaaaccaaaatcttcaaaattcattcaagcaaaactgttgaaattgaaaca 48302643  T
Q  261 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 360  Q
     |||||||  |||||||   || ||||||||  |  ||| ||||||||| || ||||| |   |||||||||||||||||||||||||||||||||||||    
T  48302644 aaaatgattgggggtggtcatatgggcaaaaagagctatcaaagtcaagtttcatcttcatcttccatgtttaatggtgatgtgagagtgcttgaatgtt 48302743  T
Q  361 g 361  Q
    |    
T  48302744 g 48302744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 61 - 290
Target Start/End: Complemental strand, 1547467 - 1547241
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 160  Q
    |||||||| ||||| |||||||||| ||||||||||||||||| | ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||    
T  1547467 tttcttccccaaatgtataaaattgaaaccctaattttacaatctttaatccacactctaaaattcccaaaa-ttctttcaataattagtggtaacgttc 1547369  T
Q  161 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaat-tcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatc 259  Q
    |||||| ||| ||| | | ||||||||||||        ||||||| ||||||   |||||| |||||||| |||||| ||||| ||||  | ||||||     
T  1547368 ttccccgattgaaataacctcaaaccctaat--tttttgattgaattcgaaataaaaaaatccccaaaattccttcaaacaaaactgttgtaattgaata 1547271  T
Q  260 tgaaatgatgaggggtgggtgtaagggcaaa 290  Q
     ||||||||| |||||||||||| |||||||    
T  1547270 cgaaatgatg-ggggtgggtgtatgggcaaa 1547241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 57 - 342
Target Start/End: Original strand, 3690440 - 3690725
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    ||||| |||||| ||| | |||||||||||||||||||||  ||||| || |||||||| || |||||  || ||||||| | ||||||| ||||||       
T  3690440 gctctgtcttccccaattgtataaaattggaaccctaattacacaatttgcaatctacattctaaaatcacctaaatttcctccaataataagtggtcca 3690539  T
Q  157 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 256  Q
    |||||||||||||||||||| ||| ||||||||||        |||||||| ||||  |||||||  ||||||||||| |||||||| | || || ||||    
T  3690540 gttcttccccaattcaaaaaacttgaaaccctaattttttcgtattgaatctgaaagccaaaatccacaaaatttcttgaagcaaaactattgaaattga 3690639  T
Q  257 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatg 342  Q
    |||||||||||   ||||||||  || ||| ||||    ||||||||||||||||| ||||| |||||||| ||||| ||||||||    
T  3690640 atctgaaatgaaatggggtgggaatatgggaaaaaattgttatgaaagtcaagcttcatcttcaagctccaagtttagtggtgatg 3690725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 61 - 170
Target Start/End: Original strand, 30108857 - 30108966
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 160  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  30108857 tttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttc 30108956  T
Q  161 ttccccaatt 170  Q
    ||||||||||    
T  30108957 ttccccaatt 30108966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 61 - 367
Target Start/End: Complemental strand, 23955099 - 23954794
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 160  Q
    |||||||| ||| | |||||||||||||||||||||  ||||| |  | ||||||||| |||||  | |||||||| | ||||||| ||||||   ||||    
T  23955099 tttcttccccaattgtataaaattggaaccctaattacacaatcttcagtctacactctaaaataacaaaaatttcctccaataataagtggtccagttc 23955000  T
Q  161 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 260  Q
    ||| ||||||||| || ||||||||||||||        |||||||| ||||   ||||||  ||||||||||| |||||||| | || |  ||||||||    
T  23954999 ttcgccaattcaacaaacttcaaaccctaatttcttggtattgaatctgaaagctaaaatcctcaaaatttcttgaagcaaaactattgacattgaatct 23954900  T
Q  261 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 360  Q
    ||||||| | |||||| |  || ||  |||| || |||||||| || ||||| |||||  ||||||| ||||||||||| ||| ||||||||||||||||    
T  23954899 gaaatgacg-ggggtgagaatatggaaaaaaacagttatgaaaatcgagcttcatcttcgagctccaagtttaatggtgttgttagagtgcttgaatgtt 23954801  T
Q  361 gatgtcc 367  Q
    | |||||    
T  23954800 ggtgtcc 23954794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 200 - 361
Target Start/End: Original strand, 30109024 - 30109185
Alignment:
Q  200 attgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattat 299  Q
    |||||||| |||| ||||||||  |||||||  ||||||||||| |||| || |||||||| |||||||| | |||||   || ||||||||  || |||    
T  30109024 attgaatctgaaaatcaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatctaaaatgatgggaggtggtcatatgggcaaaaagaactat 30109123  T
Q  300 gaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttg 361  Q
     |||||||||||| ||||| |  |||||||||||||||||||||||||||||||||||||||    
T  30109124 caaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgttg 30109185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 76 - 367
Target Start/End: Original strand, 46994970 - 46995261
Alignment:
Q  76 tataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaa 175  Q
    ||||||||||||||| |||||  ||||| || ||||||||||| | |||    |||||||| | ||||||| ||||||   ||||| |||||||||||||    
T  46994970 tataaaattggaaccttaattacacaatctgcaatctacactctataatcatgaaaatttcctccaataataagtggttcagttctgccccaattcaaaa 46995069  T
Q  176 agcttcaaaccctaatannnnnnn-attgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgagggg 274  Q
    | || |||||||||||         | |||||  ||||  || ||||  ||||||||||| |||||||| | || || ||||||||||||||||| ||||    
T  46995070 aactccaaaccctaatttttttcgtagtgaatttgaaagccagaatcctcaaaatttcttgaagcaaaactattgaaattgaatctgaaatgatgtgggg 46995169  T
Q  275 tgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 367  Q
    ||||  || ||  | || |  ||||||||||||||||| ||||| |||||||| ||||||||||| ||||||||||||||||||||| |||||    
T  46995170 tgggaatatggaaataa-cggttatgaaagtcaagcttcatcttcaagctccaagtttaatggtgttgtgagagtgcttgaatgttggtgtcc 46995261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 60 - 342
Target Start/End: Complemental strand, 36756681 - 36756398
Alignment:
Q  60 ctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgtt 159  Q
    ||||||||| ||| | |||||||||| ||||||||||  ||||| || ||||||||||| |||||  || ||||||| | ||||||| ||||||   |||    
T  36756681 ctttcttccccaattgtataaaattgaaaccctaattacacaatctgcaatctacactctaaaatcacctaaatttcctccaataataagtggtttagtt 36756582  T
Q  160 cttccccaattcaaaaagcttcaaaccctaa-tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaat 258  Q
    ||||||||||||||||| ||||||||||||| |        ||||||||  |||  |||| ||  ||||||||||| |||||||| | || || |  |||    
T  36756581 cttccccaattcaaaaaacttcaaaccctaatttttttcgtattgaatcataaaaccaaattcctcaaaatttcttgaagcaaaactattgaaataaaat 36756482  T
Q  259 ctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatg 342  Q
    |  |||||||| ||||||||  || ||| |||| |  ||||||||||| ||||| ||||| |||||||| ||||||||||||||    
T  36756481 ccaaaatgatggggggtgggaatatgggaaaaaactgttatgaaagtcgagcttcatcttcaagctccaagtttaatggtgatg 36756398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 60 - 342
Target Start/End: Complemental strand, 36762478 - 36762195
Alignment:
Q  60 ctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgtt 159  Q
    ||||||||| ||| | |||||||||| ||||||||||  ||||| || ||||||||||| |||||  || ||||||| | ||||||| ||||||   |||    
T  36762478 ctttcttccccaattgtataaaattgaaaccctaattacacaatctgcaatctacactctaaaatcacctaaatttcctccaataataagtggtttagtt 36762379  T
Q  160 cttccccaattcaaaaagcttcaaaccctaa-tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaat 258  Q
    ||||||||||||||||| ||||||||||||| |        ||||||||  |||  |||| ||  ||||||||||| |||||||| | || || |  |||    
T  36762378 cttccccaattcaaaaaacttcaaaccctaatttttttcgtattgaatcataaaaccaaattcctcaaaatttcttgaagcaaaactattgaaataaaat 36762279  T
Q  259 ctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatg 342  Q
    |  |||||||| ||||||||  || ||| |||| |  ||||||||||| ||||| ||||| |||||||| ||||||||||||||    
T  36762278 ccaaaatgatggggggtgggaatatgggaaaaaactgttatgaaagtcgagcttcatcttcaagctccaagtttaatggtgatg 36762195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 61 - 132
Target Start/End: Complemental strand, 19712085 - 19712014
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaa 132  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  19712085 tttcttccccaaatatataaaattggaaccctaattttacaatctgtaatctacactccaaaatttccaaaa 19712014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 60 - 191
Target Start/End: Complemental strand, 36766205 - 36766074
Alignment:
Q  60 ctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgtt 159  Q
    ||||||||| ||| | |||||||||| |||||||||| |||||| || ||||||||||| |||||  || ||||||| | ||||||| ||||||   |||    
T  36766205 ctttcttccccaattgtataaaattgaaaccctaattatacaatctgcaatctacactctaaaatcacctaaatttcctccaataataagtggtttagtt 36766106  T
Q  160 cttccccaattcaaaaagcttcaaaccctaat 191  Q
    ||||||||||||||||| ||||||||||||||    
T  36766105 cttccccaattcaaaaaacttcaaaccctaat 36766074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 76 - 190
Target Start/End: Complemental strand, 40785330 - 40785216
Alignment:
Q  76 tataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaa 175  Q
    |||||||||| |||||||||| |||||| || |||||||||||||||||  |||||||||| | || |||| ||||||   |||||||||||||||||||    
T  40785330 tataaaattgtaaccctaattgtacaatctgcaatctacactccaaaatcaccaaaatttcctccactaataagtggtccagttcttccccaattcaaaa 40785231  T
Q  176 agcttcaaaccctaa 190  Q
    | |||||||||||||    
T  40785230 atcttcaaaccctaa 40785216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 57 - 191
Target Start/End: Original strand, 46810995 - 46811129
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    |||||||||| | ||| | |||||||||||||| ||||||  ||| | || ||||||||||| |||||  || ||||||| | ||||||| ||||||       
T  46810995 gctctttctttcccaattgtataaaattggaactctaattacacagtctgcaatctacactctaaaatcacctaaatttcctccaataataagtggtcca 46811094  T
Q  157 gttcttccccaattcaaaaagcttcaaaccctaat 191  Q
    |||||||||||||||||||| ||||||||||||||    
T  46811095 gttcttccccaattcaaaaaacttcaaaccctaat 46811129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 57 - 171
Target Start/End: Complemental strand, 7403590 - 7403476
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    |||||||||| | ||||| ||| |||||||||||||| ||||||||||||||||||| | ||||||||  |||| ||||||| || |||||  ||  |||    
T  7403590 gctctttctttcccaaatctattaaattggaaccctagttttacaatatgtaatctagagtccaaaatctccaagatttcttccattaattgatgacaac 7403491  T
Q  157 gttcttccccaattc 171  Q
    ||||||| |||||||    
T  7403490 gttcttctccaattc 7403476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 63 - 191
Target Start/End: Original strand, 8421712 - 8421840
Alignment:
Q  63 tcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttctt 162  Q
    |||||| ||| |||||||||||| ||||||||||  ||||| | ||||||||| || || ||  || ||||||| | ||||||| ||||||   ||||||    
T  8421712 tcttccccaattatataaaattgaaaccctaattacacaatctataatctacattctaatatcacctaaatttcctccaataataagtggtccagttctt 8421811  T
Q  163 ccccaattcaaaaagcttcaaaccctaat 191  Q
    |||||||||||||| ||| ||||||||||    
T  8421812 ccccaattcaaaaaacttaaaaccctaat 8421840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 58 - 176
Target Start/End: Complemental strand, 13036309 - 13036191
Alignment:
Q  58 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 157  Q
    ||||||||||| |||||||||||| |||||| ||| |||||| ||| ||| | ||| | | |||||| ||||||||||||| || |||||  ||  || |    
T  13036309 ctctttcttccccaaatatataaatttggaatccttattttataatttgtcacctagagttcaaaatccccaaaatttcttccattaattgatgacaaag 13036210  T
Q  158 ttcttccccaattcaaaaa 176  Q
    |||||||||||||||||||    
T  13036209 ttcttccccaattcaaaaa 13036191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 191
Target Start/End: Complemental strand, 45361062 - 45360929
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    |||||||||||| ||||||| |||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||| ||||  ||  ||     
T  45361062 gctctttcttccccaaatat-taaatttggaaccctaatgttataatttgttacctagagttcaaaatcccccaaatttcttacaagaattgatgtcaat 45360964  T
Q  157 gttcttccccaattcaaaaagcttcaaaccctaat 191  Q
    |||||||||||||||||||| ||| ||||||||||    
T  45360963 gttcttccccaattcaaaaaacttaaaaccctaat 45360929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 19712175 - 19712098
Alignment:
Q  6 agtgaccaaaatttccaaggatcaaattaattgatttgtagaaaatgctttgctctttcttcctcaaatatataaaat 83  Q
    |||||||| || ||| |||||  |||||||||||||||| ||||||| ||||| ||||||||| ||||||||||||||    
T  19712175 agtgaccataacttcaaaggactaaattaattgatttgttgaaaatgttttgccctttcttccccaaatatataaaat 19712098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 63 - 191
Target Start/End: Original strand, 35342722 - 35342850
Alignment:
Q  63 tcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttctt 162  Q
    |||||| ||| | |||||||||||||||||||||  ||||| | ||||||||| || || ||  || ||||||| | ||||||| ||| ||   ||||||    
T  35342722 tcttccccaattgtataaaattggaaccctaattacacaatctataatctacattctaatatcacctaaatttcctccaataataagtagtccagttctt 35342821  T
Q  163 ccccaattcaaaaagcttcaaaccctaat 191  Q
    |||||||||||||| ||| ||||||||||    
T  35342822 ccccaattcaaaaaacttaaaaccctaat 35342850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 59 - 191
Target Start/End: Original strand, 37791965 - 37792097
Alignment:
Q  59 tctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgt 158  Q
    |||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||| | | |||||| || |||||||||| |   || |  ||| || ||    
T  37791965 tctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatcccaaaaatttcttccctgaacttatggcaaagt 37792064  T
Q  159 tcttccccaattcaaaaagcttcaaaccctaat 191  Q
    |||||||||||||||||| ||| ||||||||||    
T  37792065 tcttccccaattcaaaaaacttaaaaccctaat 37792097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 192
Target Start/End: Original strand, 23904917 - 23905052
Alignment:
Q  58 ctctttcttcctc-aaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    ||||||||||| | ||||||||||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  ||     
T  23904917 ctctttcttcccccaaatatataaatttggaaccctaatgttataatttgtcaactagagttcaaaatcccccaaatttcttccatgaattgatgtcaat 23905016  T
Q  157 gttcttccccaattcaaaaagcttcaaaccctaata 192  Q
    |||||||||||||||||||| ||| |||||||||||    
T  23905017 gttcttccccaattcaaaaaacttaaaaccctaata 23905052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 61 - 191
Target Start/End: Complemental strand, 6605162 - 6605032
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 160  Q
    |||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  || |||     
T  6605162 tttcttccccaaatatataaatttggaaccctaatgttataatttgttacctagagttcaaaatcccccaaatttcttccatgaattgatgtcaatgttt 6605063  T
Q  161 ttccccaattcaaaaagcttcaaaccctaat 191  Q
    |||||||||||||||| ||| ||||||||||    
T  6605062 ttccccaattcaaaaaacttaaaaccctaat 6605032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 57 - 191
Target Start/End: Complemental strand, 13169435 - 13169302
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    |||||||||||| |||||||||||| ||||| ||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  ||     
T  13169435 gctctttcttccccaaatatataaatttgga-ccctaatgttataatttgttacctagagttcaaaatcccccaaatttcttacatgaattgatgtcaat 13169337  T
Q  157 gttcttccccaattcaaaaagcttcaaaccctaat 191  Q
    |||||||||||||||||||| ||| ||||||||||    
T  13169336 gttcttccccaattcaaaaaacttaaaaccctaat 13169302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 57 - 191
Target Start/End: Original strand, 39857999 - 39858133
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    |||||||||||| |||||||||||| | ||||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  ||     
T  39857999 gctctttcttccccaaatatataaattcggaaccctaatgttataatttgttacctagagttcaaaatcccccaaatttcttacatgaattgatgtcaat 39858098  T
Q  157 gttcttccccaattcaaaaagcttcaaaccctaat 191  Q
    ||||||| |||||||||||| ||| ||||||||||    
T  39858099 gttcttcaccaattcaaaaaacttaaaaccctaat 39858133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 61 - 191
Target Start/End: Original strand, 47384608 - 47384738
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 160  Q
    |||||||| ||| |||||||| ||||||||||||| ||| ||| ||| | ||| | | |||||| |||||||| |||| ||  ||||  ||  || ||||    
T  47384608 tttcttccccaattatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatccccaaaatgtcttccatgaattgatgtcaaagttc 47384707  T
Q  161 ttccccaattcaaaaagcttcaaaccctaat 191  Q
    |||||||||||||||| ||| ||||||||||    
T  47384708 ttccccaattcaaaaaacttaaaaccctaat 47384738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 200 - 305
Target Start/End: Complemental strand, 48705499 - 48705396
Alignment:
Q  200 attgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattat 299  Q
    |||||||||||||  || |||| ||| ||||||||||||||||| ||||||| ||||||| ||||||||  ||||||||  || ||||||||  ||||||    
T  48705499 attgaatccgaaaaccagaatctccataatttcttcaagcaaaactgttcaaattgaatccgaaatgat--ggggtgggcatatgggcaaaaagaattat 48705402  T
Q  300 gaaagt 305  Q
     |||||    
T  48705401 caaagt 48705396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 347
Target Start/End: Complemental strand, 40785164 - 40785079
Alignment:
Q  262 aaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgaga 347  Q
    |||||||| ||||||||  || ||  |||| |||||||||||||| |||||  |||| |||||||| |||||||||||||||||||    
T  40785164 aaatgatggggggtgggaatatggaaaaaaacaattatgaaagtcgagcttcttcttcaagctccaagtttaatggtgatgtgaga 40785079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 119 - 191
Target Start/End: Original strand, 48850929 - 48851001
Alignment:
Q  119 caaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagcttcaaaccctaat 191  Q
    |||||||||||||||||||| || |||||  ||  || |||||||||||||||||||| ||| ||||||||||    
T  48850929 caaaattcccaaaatttcttccattaattgatgccaaagttcttccccaattcaaaaaacttaaaaccctaat 48851001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 113
Target Start/End: Complemental strand, 12904101 - 12904046
Alignment:
Q  58 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatcta 113  Q
    ||||||||||  ||||| ||||||||| |||||||||||||||||| |||||||||    
T  12904101 ctctttcttctccaaatctataaaatttgaaccctaattttacaatctgtaatcta 12904046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 176
Target Start/End: Complemental strand, 48311543 - 48311427
Alignment:
Q  58 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 157  Q
    ||||||||||| ||||||||||   |||||||| |||||||| ||| ||| | ||| | | |||||| | |||||||||||||| |||||  ||  || |    
T  48311543 ctctttcttccccaaatatatat--ttggaaccttaattttataatttgtcacctagaattcaaaatcctcaaaatttctttcattaattgatgacaaag 48311446  T
Q  158 ttcttccccaattcaaaaa 176  Q
    |||||||||||||||||||    
T  48311445 ttcttccccaattcaaaaa 48311427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 147
Target Start/End: Original strand, 3921007 - 3921096
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataatt 147  Q
    |||||||||||| | ||| |||||||||| |||| ||||| |||||| ||||||||| | | |||||| ||||||||||||| || |||||    
T  3921007 gctctttcttccccgaatctataaaattgaaacc-taattctacaatctgtaatctatagtacaaaatccccaaaatttcttccattaatt 3921096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 248
Target Start/End: Complemental strand, 12904026 - 12903939
Alignment:
Q  161 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgtt 248  Q
    ||||||||||| |||| | ||||||||||||        |||||| ||||||| |||| || ||||||||||||||||||||||||||    
T  12904026 ttccccaattctaaaaacgtcaaaccctaatttgtttttattgaacccgaaatccaaagtctccaaaatttcttcaagcaaaattgtt 12903939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 191
Target Start/End: Original strand, 38549845 - 38549975
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 160  Q
    ||||||||  ||||||||||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||||||||||||| ||  ||||  |   || ||||    
T  38549845 tttcttccctaaatatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatccccaaaatttcttccatgaattgataccaaagttc 38549944  T
Q  161 ttccccaattcaaaaagcttcaaaccctaat 191  Q
    |||||||||||||||| ||| ||| ||||||    
T  38549945 ttccccaattcaaaaaacttaaaatcctaat 38549975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 190
Target Start/End: Complemental strand, 22155626 - 22155495
Alignment:
Q  58 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 157  Q
    ||||||||||| |||||||||||| |||||||| |||| ||| ||| ||| |  || | | |||||| ||| ||||||||| ||  ||||  ||  || |    
T  22155626 ctctttcttccccaaatatataaa-ttggaaccttaatgttataatttgtcacttagagttcaaaatcccccaaatttcttccatgaattgatgtcaatg 22155528  T
Q  158 ttcttccccaattcaaaaagcttcaaaccctaa 190  Q
    ||||||||||||||||||| ||| |||||||||    
T  22155527 ttcttccccaattcaaaaaacttaaaaccctaa 22155495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 190
Target Start/End: Complemental strand, 22211541 - 22211410
Alignment:
Q  58 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 157  Q
    ||||||||||| |||||||||||| |||||||| |||| ||| ||| ||| |  || | | |||||| ||| ||||||||| ||  ||||  ||  || |    
T  22211541 ctctttcttccccaaatatataaa-ttggaaccttaatgttataatttgtcacttagagttcaaaatcccccaaatttcttccatgaattgatgtcaatg 22211443  T
Q  158 ttcttccccaattcaaaaagcttcaaaccctaa 190  Q
    ||||||||||||||||||| ||| |||||||||    
T  22211442 ttcttccccaattcaaaaaacttaaaaccctaa 22211410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 191
Target Start/End: Original strand, 38472573 - 38472705
Alignment:
Q  59 tctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgt 158  Q
    ||||| |||| |||||||||||| |||||||| |||| ||| ||| ||| | ||| | | |||||| |||  |||||||| ||  ||||  ||  || ||    
T  38472573 tctttattccccaaatatataaatttggaaccttaatgttataatttgtcacctagagttcaaaatcccccgaatttcttccatgaattgatgtcaatgt 38472672  T
Q  159 tcttccccaattcaaaaagcttcaaaccctaat 191  Q
    |||||||||||||||||| ||| ||||||||||    
T  38472673 tcttccccaattcaaaaaacttaaaaccctaat 38472705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 58 - 189
Target Start/End: Original strand, 34775362 - 34775493
Alignment:
Q  58 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 157  Q
    |||||||||||  ||||||||||| ||||||||||||| ||| ||| ||| | ||| | | ||||||  || ||||||||| ||  ||||  ||  || |    
T  34775362 ctctttcttccctaaatatataaatttggaaccctaatgttataatttgttacctagagttcaaaatctcccaaatttcttacatgaattgatgtcaatg 34775461  T
Q  158 ttcttccccaattcaaaaagcttcaaacccta 189  Q
    ||||||||||||||| ||| ||| ||||||||    
T  34775462 ttcttccccaattcagaaaacttaaaacccta 34775493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 278
Target Start/End: Original strand, 8421867 - 8421921
Alignment:
Q  224 caaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtggg 278  Q
    ||||||||||| ||||||||   || || ||||||||||||||||||||||||||    
T  8421867 caaaatttcttgaagcaaaacgcttgaaattgaatctgaaatgatgaggggtggg 8421921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 34784243 - 34784289
Alignment:
Q  6 agtgaccaaaatttccaaggatcaaattaattgatttgtagaaaatg 52  Q
    |||||||||||||||||||||  ||||| ||||||||| ||||||||    
T  34784243 agtgaccaaaatttccaaggacgaaattgattgatttgcagaaaatg 34784289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 125
Target Start/End: Complemental strand, 27956988 - 27956933
Alignment:
Q  69 tcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaatt 125  Q
    ||||||||||||| ||||||| ||||||  ||||| || ||||||||||||||||||    
T  27956988 tcaaatatataaa-ttggaactctaattacacaatctgcaatctacactccaaaatt 27956933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 48227743 - 48227707
Alignment:
Q  58 ctctttcttcctcaaatatataaaattggaaccctaa 94  Q
    ||||||||||| |||||||||||| ||||||||||||    
T  48227743 ctctttcttccccaaatatataaatttggaaccctaa 48227707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 128; Significance: 4e-66; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 57 - 365
Target Start/End: Original strand, 26448037 - 26448342
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||| | ||||| |||||||||  || |||||||||| |||||||||||||||||    
T  26448037 gctctttcatcctcaaatatataaaattggaaccttaattttacaatattttatctatactccaaaa-ccctaaaatttcttccaataattagtggtaac 26448135  T
Q  157 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 256  Q
    || ||| | ||||||||||| ||||||||||||||        ||||||||  |||  || |||  ||||||||||||||||||||| ||||||| ||||    
T  26448136 gtcctttctcaattcaaaaaacttcaaaccctaat-tttttttattgaatctaaaaaccagaatacccaaaatttcttcaagcaaaactgttcaaattga 26448234  T
Q  257 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaa 356  Q
    |||||||||||||| |||||||  || ||||| ||  | |||| |||||||||||| | ||| ||||||||| ||||||||||||||||||||| |||||    
T  26448235 atctgaaatgatga-gggtgggcatatgggcacaaagagttatcaaagtcaagcttcaccttcaagctccatctttaatggtgatgtgagagtgtttgaa 26448333  T
Q  357 tgttgatgt 365  Q
    |||||||||    
T  26448334 tgttgatgt 26448342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 59 - 279
Target Start/End: Original strand, 30501391 - 30501610
Alignment:
Q  59 tctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgt 158  Q
    |||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30501391 tctttcttcctccaatatataaaattggaaccctaattttacaatctttaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgt 30501490  T
Q  159 tcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaat 258  Q
     ||||||||||||||||| |  |||||||| ||        ||||||||||||| ||| | || | ||||||||||||||||||| ||||||| ||||||    
T  30501491 acttccccaattcaaaaaaccccaaaccct-atttttttttattgaatccgaaaatcagattccctaaaatttcttcaagcaaaactgttcaaattgaat 30501589  T
Q  259 ctgaaatgatgaggggtgggt 279  Q
    |||||||||||  ||||||||    
T  30501590 ctgaaatgatggtgggtgggt 30501610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 61 - 265
Target Start/End: Complemental strand, 40963184 - 40962981
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 160  Q
    |||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  40963184 tttcttccccaaatatataaaattggaaccctaattttacaatctttaatctacactccaaaattcccaaaatttcttacaataattagtggtaacgttc 40963085  T
Q  161 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 260  Q
    ||||||||||||||||  |||||||||||||        ||||||||||||   || ||||  |||||||||||||||||||||||||||| ||||||||    
T  40963084 ttccccaattcaaaaaaattcaaaccctaat-tttttttattgaatccgaataccagaatccacaaaatttcttcaagcaaaattgttcaaattgaatct 40962986  T
Q  261 gaaat 265  Q
    |||||    
T  40962985 gaaat 40962981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 59 - 367
Target Start/End: Complemental strand, 1847462 - 1847154
Alignment:
Q  59 tctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgt 158  Q
    |||||||||| ||||| |||||||||||||||||||||  ||||| ||||||||||||| ||||||  |||||||||| | ||||||  | ||||   ||    
T  1847462 tctttcttccccaaatgtataaaattggaaccctaattacacaatttgtaatctacacttcaaaatcaccaaaatttcatccaataaaaaatggttcagt 1847363  T
Q  159 tcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaat 258  Q
    |||||||||||| ||||| || |||||||||||        |||||||  ||||  |||||||  ||||||||||| |||||||| | || |  ||||||    
T  1847362 tcttccccaatttaaaaaactacaaaccctaattttttcgtattgaatttgaaagccaaaatcctcaaaatttcttgaagcaaaactattgatattgaat 1847263  T
Q  259 ctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatg 358  Q
    ||||||||||| ||||||||  || ||| |||| || ||||||||||| ||||| ||||| |||||||| |||||||||||||||||||| |||||||||    
T  1847262 ctgaaatgatggggggtgggaatatgggaaaaaacagttatgaaagtcgagcttcatcttcaagctccaagtttaatggtgatgtgagagagcttgaatg 1847163  T
Q  359 ttgatgtcc 367  Q
    ||| |||||    
T  1847162 ttggtgtcc 1847154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 61 - 361
Target Start/End: Complemental strand, 41945898 - 41945600
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 160  Q
    |||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||||  | ||| |||||| |||||||||  ||| ||||||    
T  41945898 tttcttccccaaatatataaaattggaaccctaattttacgatgtgtaatctacactccaaaatctctaaattttcttccaataattaagggtcacgttc 41945799  T
Q  161 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 260  Q
    |||||||| |||||||  | |||| ||||||        |||||||| ||||  |||||||  ||||| || ||||||||||| |||| || ||||||||    
T  41945798 ttccccaaatcaaaaaattgcaaatcctaat-ttttttaattgaatctgaaaaccaaaatctgcaaaa-ttattcaagcaaaactgttgaaattgaatct 41945701  T
Q  261 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 360  Q
     |||||| | |||||||   || ||||||||  |  ||| |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||    
T  41945700 aaaatgaaggggggtggtcatatgggcaaaaagagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 41945601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 59 - 355
Target Start/End: Original strand, 32842721 - 32843017
Alignment:
Q  59 tctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgt 158  Q
    |||||||||||||||| ||||||||||||||||||||||| |||| | ||||||||| |||||||||||||||||||||| || |||||| ||  |||||    
T  32842721 tctttcttcctcaaatctataaaattggaaccctaatttttcaatctctaatctacaatccaaaattcccaaaatttcttccattaattaatgacaacgt 32842820  T
Q  159 tcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaat 258  Q
    ||||||  | ||| |||| ||||||||||||||        |||||||| ||||| ||||||| ||||||    ||||||||||||||||||  ||||||    
T  32842821 tcttccttacttctaaaaacttcaaaccctaatttgttttgattgaatctgaaatccaaaatccccaaaaaaaattcaagcaaaattgttcagattgaat 32842920  T
Q  259 ctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttga 355  Q
      ||||||||| | |||||| ||| |||||| |  | || | |||||| ||||| ||||| || ||  ||||||||||||||||| ||| |||||||    
T  32842921 gcgaaatgatgggtggtgggcgtatgggcaacacaagttctcaaagtcgagcttcatcttcaaactttatgtttaatggtgatgtcagaatgcttga 32843017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 65 - 291
Target Start/End: Original strand, 49494787 - 49495011
Alignment:
Q  65 ttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttcc 164  Q
    |||| ||||| ||||||||||||||||||||||||||||   ||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  49494787 ttccccaaatgtataaaattggaaccctaattttacaatcattaatccacactccaaaattcccaaaaattcttccaataattagtggtaacgttcttcc 49494886  T
Q  165 ccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaat-tcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaa 263  Q
    |||||||||| | | ||||||||||||        ||||||||||||||   |||||| | |||||| |||||| ||||| ||||  | |||||||||||    
T  49494887 ccaattcaaataacctcaaaccctaat--tttttgattgaatccgaaataaaaaaatcccgaaaattccttcaaacaaaactgttataattgaatctgaa 49494984  T
Q  264 atgatgaggggtgggtgtaagggcaaaa 291  Q
    |||||| |||||||||||| ||||||||    
T  49494985 atgatg-ggggtgggtgtatgggcaaaa 49495011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 57 - 358
Target Start/End: Complemental strand, 48635173 - 48634872
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    |||||||||||| ||| | ||||| |||||||||||||||  ||||| |  ||| ||||||| |||||  | ||||| || | |||| || | ||||       
T  48635173 gctctttcttccccaattgtataacattggaaccctaattacacaatctacaatttacactctaaaatcactaaaatatcctccaattataaatggtcca 48635074  T
Q  157 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 256  Q
    |||||||||||||||||||| ||||||||||||||        |||||||  |||| ||||||||  ||||||||||| |||||||| | || || ||||    
T  48635073 gttcttccccaattcaaaaaacttcaaaccctaattttttcgtattgaatttgaaagtcaaaatcctcaaaatttcttaaagcaaaactattgaaattga 48634974  T
Q  257 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaa 356  Q
    ||||||||||||| ||||||||  || ||  |||| || ||||||||||| ||||| |||||  ||||||| ||||||||||| ||||||||||||||||    
T  48634973 atctgaaatgatggggggtgggaatatggaaaaaaacagttatgaaagtcgagcttcatcttcgagctccaagtttaatggtgttgtgagagtgcttgaa 48634874  T
Q  357 tg 358  Q
    ||    
T  48634873 tg 48634872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 57 - 346
Target Start/End: Original strand, 24382004 - 24382293
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    |||||||||||| ||| | |||||| ||| ||||||||||  ||||| |  |||||||||||||||||  |||||||||| |||| |||| |||| |       
T  24382004 gctctttcttccccaattgtataaagttgtaaccctaattacacaatcttcaatctacactccaaaatcaccaaaatttccttcagtaataagtgatcca 24382103  T
Q  157 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 256  Q
    |||||||||||||| ||||| ||||||||||||||        |||||||| |||| ||||||||  ||| |||| || |||||||| | || || ||||    
T  24382104 gttcttccccaattaaaaaatcttcaaaccctaattttttcgcattgaatctgaaagtcaaaatcctcaagattttttgaagcaaaactattgaaattga 24382203  T
Q  257 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgag 346  Q
    ||||||||||||| ||||||||  || ||  |||| |  ||||||||||  | ||| ||||| |||||||| || |||||||||||||||    
T  24382204 atctgaaatgatggggggtgggaatatggaaaaaaactgttatgaaagtttaacttcatcttgaagctccaagtataatggtgatgtgag 24382293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 61 - 176
Target Start/End: Original strand, 37865676 - 37865791
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 160  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||| ||||||  ||||||||  ||| ||||||    
T  37865676 tttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttctaataattaagggtcacgttc 37865775  T
Q  161 ttccccaattcaaaaa 176  Q
    |||||||| |||||||    
T  37865776 ttccccaaatcaaaaa 37865791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 76 - 338
Target Start/End: Original strand, 31885827 - 31886088
Alignment:
Q  76 tataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaa 175  Q
    |||||||||||||| ||||||  ||||| || ||||||||||| |||||  |||||||||| | ||||||| ||||||   |||||||||||||| ||||    
T  31885827 tataaaattggaactctaattacacaatctgcaatctacactctaaaatcaccaaaatttcctccaataataagtggttcagttcttccccaattgaaaa 31885926  T
Q  176 agcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggt 275  Q
    | ||||||||||||||        |||||||  ||||  |||||||  ||||||||||| |||||| | | || || |||||||| |||||| | |||||    
T  31885927 aacttcaaaccctaattttttcgtattgaatttgaaagccaaaatcctcaaaatttcttgaagcaagactattgaaattgaatctaaaatgacg-ggggt 31886025  T
Q  276 gggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggt 338  Q
    |||  || ||| |||| || ||||||||||| ||||| ||||| ||| |||| ||||||||||    
T  31886026 gggaatatgggaaaaaacagttatgaaagtcgagcttcatcttcaagatccaagtttaatggt 31886088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 57 - 191
Target Start/End: Original strand, 2975749 - 2975883
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    |||||||||||| ||||||||||||||||||||  |||||  ||||| |  | |||||||||||||||  |||||||||||| ||||||| || |||       
T  2975749 gctctttcttccccaaatatataaaattggaactttaattacacaatcttcattctacactccaaaatcaccaaaatttcttccaataataagcggtcca 2975848  T
Q  157 gttcttccccaattcaaaaagcttcaaaccctaat 191  Q
    |||||||||||||||||||| ||||||||||||||    
T  2975849 gttcttccccaattcaaaaaacttcaaaccctaat 2975883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 61 - 170
Target Start/End: Complemental strand, 33051253 - 33051144
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 160  Q
    |||||||| ||||| |||||||| |||||| ||||| |||||||| ||||| ||||||||||||| ||||||  |||| ||||||||||||||||| |||    
T  33051253 tttcttccccaaatgtataaaataggaaccataattatacaatatttaatccacactccaaaatttccaaaaaatcttccaataattagtggtaacattc 33051154  T
Q  161 ttccccaatt 170  Q
    ||||||||||    
T  33051153 ttccccaatt 33051144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 159 - 367
Target Start/End: Original strand, 33112233 - 33112441
Alignment:
Q  159 tcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaat 258  Q
    |||||||||||||||||| |||||||||||||         |||||||  |||  ||||||||   |||||||||| |||||||| | || || ||| ||    
T  33112233 tcttccccaattcaaaaaacttcaaaccctaac-tttttgcattgaatttgaatgtcaaaatccttaaaatttcttgaagcaaaactattgaaattggat 33112331  T
Q  259 ctgaaatgatgagggg-tgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaat 357  Q
    ||||||||||| |||| ||||  || ||| |||| || ||||||||||| ||||| ||||| || ||||| |||||||||||||||||||||||||||||    
T  33112332 ctgaaatgatgggggggtgggaatatgggaaaaaacagttatgaaagtcgagcttcatcttcaaactccaagtttaatggtgatgtgagagtgcttgaat 33112431  T
Q  358 gttgatgtcc 367  Q
    |||| |||||    
T  33112432 gttggtgtcc 33112441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 233 - 361
Target Start/End: Original strand, 37886239 - 37886367
Alignment:
Q  233 ttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgttt 332  Q
    ||||||||||| |||| || |||||||| ||||||||||||||||   || ||||||||  |  ||| |||||||||||| ||||| |  ||||||||||    
T  37886239 ttcaagcaaaactgttgaaattgaatctaaaatgatgaggggtggtcatatgggcaaaaagagctatcaaagtcaagcttcatcttcatcctccatgttt 37886338  T
Q  333 aatggtgatgtgagagtgcttgaatgttg 361  Q
    |||||||||||||||||||||||||||||    
T  37886339 aatggtgatgtgagagtgcttgaatgttg 37886367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 157 - 361
Target Start/End: Complemental strand, 23775353 - 23775149
Alignment:
Q  157 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 256  Q
    ||||||||||| |||||||| ||||||||||||||        ||| |||  ||||  |||||||  ||||||||||| |||||||| | || || ||||    
T  23775353 gttcttccccacttcaaaaaacttcaaaccctaattttttcgtatttaatttgaaagccaaaatcctcaaaatttcttgaagcaaaactattgaaattga 23775254  T
Q  257 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaa 356  Q
    ||||||||||||| ||| ||||  || ||| |||| || ||||||||||| ||||| |||||  ||||| | ||| ||||||| ||||||||||||||||    
T  23775253 atctgaaatgatgggggatgggaatatgggaaaaaacagttatgaaagtcgagcttcatcttcgagctctaagttcaatggtgttgtgagagtgcttgaa 23775154  T
Q  357 tgttg 361  Q
    |||||    
T  23775153 tgttg 23775149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 57 - 367
Target Start/End: Original strand, 35861831 - 35862141
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatt-tctttcaataattagtggtaa 155  Q
    |||||||||||| ||||| |||||||||| |||||||||| || ||| ||||||||| | |||||||| ||||||| | |||| |  |||||  ||  ||    
T  35861831 gctctttcttccccaaatctataaaattgaaaccctaattataaaatttgtaatctatagtccaaaatccccaaaaatatcttcctttaattgatgacaa 35861930  T
Q  156 cgttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaa-atcaccaaaatttcttcaagcaaaattgttcaattt 254  Q
    | |||||||||| || ||||| |||| || |||| |        ||||||||||||||||||| ||| |||||||| |||||||      ||||||  ||    
T  35861931 cattcttccccatttaaaaaa-cttctaaacctatt-tttttttattgaatccgaaattcaaagatccccaaaattccttcaagttttggtgttcaggtt 35862028  T
Q  255 gaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttg 354  Q
    ||||||||||||||| | |||||  ||| |||||||| ||||||| |||||  |  || ||||| |||||| |||||||||||||||||||||||| |||    
T  35862029 gaatctgaaatgatgggtggtggacgtatgggcaaaaacaattatcaaagttgattttcatcttcaagctctatgtttaatggtgatgtgagagtgtttg 35862128  T
Q  355 aatgttgatgtcc 367  Q
    | ||||| |||||    
T  35862129 agtgttggtgtcc 35862141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 215 - 367
Target Start/End: Original strand, 45897487 - 45897640
Alignment:
Q  215 caaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaag-caattatgaaagtcaagcttt 313  Q
    |||||||  ||||||||||| |||||||| | || || |||||| |||||||||| ||||||||  || ||| ||||  |  |||| ||||||||||||     
T  45897487 caaaatcctcaaaatttcttgaagcaaaactattgaaattgaatatgaaatgatgtggggtgggaatatgggaaaaaaacggttataaaagtcaagcttc 45897586  T
Q  314 atctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 367  Q
    ||||| |||||||| ||||||||||| ||||||||||||||||||||| |||||    
T  45897587 atcttcaagctccaagtttaatggtgttgtgagagtgcttgaatgttggtgtcc 45897640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 229 - 367
Target Start/End: Original strand, 2975887 - 2976024
Alignment:
Q  229 tttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccat 328  Q
    |||||| |||||||| | || || |||||||||||||||| |||||||||  || ||| |||| || |||| |||||| ||||| ||||| ||| ||||     
T  2975887 tttcttgaagcaaaactattgaaattgaatctgaaatgataaggggtgggaatatgggaaaaa-cagttatcaaagtcgagcttcatcttcaagttccaa 2975985  T
Q  329 gtttaatggtgatgtgagagtgcttgaatgttgatgtcc 367  Q
    ||||||||||||||||||| ||||||||||||| |||||    
T  2975986 gtttaatggtgatgtgagattgcttgaatgttgttgtcc 2976024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 57 - 342
Target Start/End: Original strand, 18429030 - 18429314
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    ||||| |||||| ||| | |||||||||| ||||||||||  ||||| || |||||| | || |||||  || ||||||| |  |||||| ||||||       
T  18429030 gctctgtcttccccaattgtataaaattgaaaccctaattacacaatctgcaatctatattctaaaatcacctaaatttcctctaataataagtggtcca 18429129  T
Q  157 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 256  Q
    |||||||||||||||||||| ||| |||||| |||        |||||||| |||| ||||||||  ||||||||||| |||||||| | || || ||||    
T  18429130 gttcttccccaattcaaaaaacttgaaacccgaatttttttgtattgaatctgaaagtcaaaatctacaaaatttcttgaagcaaaactattgaaattga 18429229  T
Q  257 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatg 342  Q
    || ||||||||   |||||| |  |||||| ||||    ||||||||||| ||||| ||||| |||||||| |||||| |||||||    
T  18429230 atttgaaatga-acggggtgagaataagggaaaaaattgttatgaaagtcgagcttcatcttcaagctccaagtttaacggtgatg 18429314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 57 - 342
Target Start/End: Original strand, 45255773 - 45256058
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    ||||| |||||| ||| | ||||||||| |||||||||||  ||||| || |||||||| || |||||  || ||||||| | ||||||| ||||||       
T  45255773 gctctgtcttccccaattgtataaaatttgaaccctaattacacaatctgcaatctacattctaaaatcacctaaatttcctccaataataagtggtcca 45255872  T
Q  157 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 256  Q
    |||||||||||||||||||| ||| ||||||||||        |||||||| ||||  |||||||  ||||||||||| || ||||| | || || ||||    
T  45255873 gttcttccccaattcaaaaaacttgaaaccctaat-ttttcgtattgaatctgaaagccaaaatccacaaaatttcttgaaacaaaactattgaaattga 45255971  T
Q  257 atctgaaatgatgaggggtgggtgtaagggcaaaagca--attatgaaagtcaagctttatctttaagctccatgtttaatggtgatg 342  Q
    ||||||||||| | |||||| |  || ||| ||||  |   ||||||||||| ||||| || || |||||||| ||||||||||||||    
T  45255972 atctgaaatgaag-ggggtgagaatatgggaaaaaaaattgttatgaaagtcgagcttcattttcaagctccaagtttaatggtgatg 45256058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 76 - 342
Target Start/End: Original strand, 33851291 - 33851555
Alignment:
Q  76 tataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaa 175  Q
    ||||||||||||||| |||||  ||||| || |||||||| || |||||  || ||||||| | ||||||| ||||||   |||||||||||||||||||    
T  33851291 tataaaattggaacc-taattacacaatctgcaatctacattctaaaatcacctaaatttcctccaataataagtggtccagttcttccccaattcaaaa 33851389  T
Q  176 agcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggt 275  Q
    |  || ||||||||||        |||||||| ||||  |||||||  ||||||||||| ||| |||| | || || ||||||||||||||| | |||||    
T  33851390 aatttgaaaccctaatttttttgtattgaatctgaaagccaaaatccacaaaatttcttgaagaaaaactattgaaattgaatctgaaatgaaggggggt 33851489  T
Q  276 gggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatg 342  Q
     ||  |  ||| ||||    ||||||||||| ||||| ||||| |||||||| ||||||||||||||    
T  33851490 -ggaatctgggaaaaaattgttatgaaagtcgagcttcatcttcaagctccaagtttaatggtgatg 33851555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 58 - 191
Target Start/End: Complemental strand, 2378709 - 2378576
Alignment:
Q  58 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 157  Q
    ||||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  || |    
T  2378709 ctctttcttccccaaatatataaatttggaaccctaatattataatttgttacctagagttcaaaatcccccaaatttcttacatgaattgatgtcaatg 2378610  T
Q  158 ttcttccccaattcaaaaagcttcaaaccctaat 191  Q
    |||||||| |||||||||| ||| ||||||||||    
T  2378609 ttcttccctaattcaaaaaacttaaaaccctaat 2378576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 58 - 191
Target Start/End: Complemental strand, 42282268 - 42282135
Alignment:
Q  58 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 157  Q
    |||||||||||  ||||||||||| ||||||||||||| ||| ||| ||| |  || | | |||||| ||||||||||||| ||  ||||  ||  || |    
T  42282268 ctctttcttccctaaatatataaatttggaaccctaatgttataatttgtcacatagaattcaaaatccccaaaatttcttccatgaattgatgccaaag 42282169  T
Q  158 ttcttccccaattcaaaaagcttcaaaccctaat 191  Q
    ||||||||||||||||||| ||| ||||||||||    
T  42282168 ttcttccccaattcaaaaaacttaaaaccctaat 42282135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 283
Target Start/End: Complemental strand, 10380719 - 10380511
Alignment:
Q  76 tataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaa 175  Q
    ||||| |||| ||||||||||  ||||| |||||| ||||||  |||||  ||||||| || | |||| || | ||||   |||||||||||||||||||    
T  10380719 tataacattgaaaccctaattacacaatctgtaatttacactttaaaatctccaaaatatcctccaattataaatggtccagttcttccccaattcaaaa 10380620  T
Q  176 agcttcaaaccctaa-tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgagggg 274  Q
    | ||||||||||||| |        |||||||  ||||  |||||||  ||||||||||| |||||||| | || || |||||||| |||| ||| ||||    
T  10380619 atcttcaaaccctaatttttttcatattgaatttgaaagccaaaatcctcaaaatttcttgaagcaaaactattgaaattgaatctaaaatcatgggggg 10380520  T
Q  275 tgggtgtaa 283  Q
    |||||||||    
T  10380519 tgggtgtaa 10380511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 57 - 191
Target Start/End: Complemental strand, 610984 - 610850
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    |||||||||||| |||||||||||  |||||||| |||| ||| ||| ||| | | | | | || ||| ||||||||||||||||  ||||  ||  ||     
T  610984 gctctttcttccccaaatatataattttggaaccttaatgttataatttgtcaccaagagttcacaatccccaaaatttctttcatgaattgatgccaaa 610885  T
Q  157 gttcttccccaattcaaaaagcttcaaaccctaat 191  Q
    |||||||||||||||||||| ||| ||||||||||    
T  610884 gttcttccccaattcaaaaaacttaaaaccctaat 610850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 61 - 191
Target Start/End: Complemental strand, 51686143 - 51686013
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 160  Q
    |||||||| |||||||||||| ||  ||||||||| ||| ||| ||| | ||| | | |||||| ||||||||||||| ||  ||||  ||  || ||||    
T  51686143 tttcttccccaaatatataaatttctaaccctaatgttataatttgtcacctagagttcaaaatccccaaaatttcttccatgaattgatgccaaagttc 51686044  T
Q  161 ttccccaattcaaaaagcttcaaaccctaat 191  Q
    |||||||||||||||| ||| ||||||||||    
T  51686043 ttccccaattcaaaaaacttaaaaccctaat 51686013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 191
Target Start/End: Complemental strand, 17516741 - 17516608
Alignment:
Q  58 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 157  Q
    ||||||||||| |||||||||||| ||||||| ||||| ||| ||| ||||| ||| | | |||||| | | ||||||||| ||  ||||  ||  || |    
T  17516741 ctctttcttccccaaatatataaatttggaactctaatgttataatttgtaacctagagttcaaaatcctccaaatttcttccatgaattgatgtcaatg 17516642  T
Q  158 ttcttccccaattcaaaaagcttcaaaccctaat 191  Q
    |||||||| |||||||||| ||| ||||||||||    
T  17516641 ttcttccctaattcaaaaaacttaaaaccctaat 17516608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 191
Target Start/End: Complemental strand, 21350390 - 21350257
Alignment:
Q  58 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 157  Q
    ||||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||| | |  ||||| ||| ||||||||| ||  ||||  ||  || |    
T  21350390 ctctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacctagagtttaaaatcccccaaatttcttccatgaattgatgtcaatg 21350291  T
Q  158 ttcttccccaattcaaaaagcttcaaaccctaat 191  Q
    | ||||||||||||||||| ||| ||||||||||    
T  21350290 tacttccccaattcaaaaaacttaaaaccctaat 21350257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 191
Target Start/End: Original strand, 30598658 - 30598791
Alignment:
Q  58 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 157  Q
    |||||||| || |||||||||||| ||||||||||||| ||| ||| ||| | ||| | | ||||||  || ||||||||| ||  ||||  ||  || |    
T  30598658 ctctttctaccccaaatatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatctcccaaatttcttccatgaattgatgtcaatg 30598757  T
Q  158 ttcttccccaattcaaaaagcttcaaaccctaat 191  Q
    ||||||||||||||||||| ||| ||||||||||    
T  30598758 ttcttccccaattcaaaaaacttaaaaccctaat 30598791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 57 - 189
Target Start/End: Original strand, 44268301 - 44268432
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    |||||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | | | | | |||||| ||| ||||||||| ||  ||||| ||  ||     
T  44268301 gctctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacccagagttcaaaatcccccaaatttcttccatgaattaatgtcaat 44268400  T
Q  157 gttcttccccaattcaaaaagcttcaaacccta 189  Q
    |||||| ||||||||||||| ||| ||||||||    
T  44268401 gttctttcccaattcaaaaaactt-aaacccta 44268432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 360
Target Start/End: Complemental strand, 13466655 - 13466609
Alignment:
Q  314 atctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 360  Q
    ||||| |||||| ||||||||||||||||||||||| ||||||||||    
T  13466655 atcttgaagctctatgtttaatggtgatgtgagagtacttgaatgtt 13466609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 191
Target Start/End: Original strand, 23887489 - 23887622
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    |||||||||||| ||| | |||||||||| || |||||||  ||||| || ||||||||||| | |||    |||||||| | ||||||| ||||||       
T  23887489 gctctttcttcc-caattgtataaaattgaaatcctaattacacaatctgcaatctacactctataatcatgaaaatttcctccaataataagtggttga 23887587  T
Q  157 gttcttccccaattcaaaaagcttcaaaccctaat 191  Q
    ||||| ||||||||||||||  |||||||||||||    
T  23887588 gttctgccccaattcaaaaaatttcaaaccctaat 23887622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 191
Target Start/End: Original strand, 27897512 - 27897646
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    |||||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||  ||||||||| ||  ||||  ||  ||     
T  27897512 gctctttcttccccaaatatataaatttggaaccctaatgttataatttgttacctagagttcaaaatccctcaaatttcttacatgaattgatgtcaat 27897611  T
Q  157 gttcttccccaattcaaaaagcttcaaaccctaat 191  Q
    |||||||||||||| ||||| ||| ||||| ||||    
T  27897612 gttcttccccaattaaaaaaacttaaaaccataat 27897646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 58 - 191
Target Start/End: Original strand, 23875963 - 23876095
Alignment:
Q  58 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 157  Q
    |||||||||||  |||| || |||||||||||||| ||||||  || ||| || || | | |||||||| ||||||||||| || |||||  ||  ||      
T  23875963 ctctttcttcccaaaatctacaaaattggaacccttattttatcatttgtcat-tagagttcaaaattctcaaaatttcttccattaattgatgacaatc 23876061  T
Q  158 ttcttccccaattcaaaaagcttcaaaccctaat 191  Q
    ||||||||||||||||||| ||||||| ||||||    
T  23876062 ttcttccccaattcaaaaaacttcaaaacctaat 23876095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 58 - 183
Target Start/End: Original strand, 45897342 - 45897467
Alignment:
Q  58 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 157  Q
    ||||||||||| ||| | ||||||||| |||||||||||  |||||||| ||||||||||| | |||    |||||||| | ||||||| |||| |   |    
T  45897342 ctctttcttccccaattgtataaaattagaaccctaattacacaatatgcaatctacactctataatcatgaaaatttcctccaataataagtgcttcag 45897441  T
Q  158 ttcttccccaattcaaaaagcttcaa 183  Q
    |||| | |||||||||||| ||||||    
T  45897442 ttctgctccaattcaaaaaacttcaa 45897467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 191
Target Start/End: Original strand, 23291889 - 23292023
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    |||||||||||   ||||||||||| ||||||||||||| ||| |||  || ||||| | | ||||||  || ||||||||| ||  |||||  |  ||     
T  23291889 gctctttcttctataaatatataaatttggaaccctaatgttataattcgtcatctagagttcaaaatctcccaaatttcttccatgaattaacgtcaat 23291988  T
Q  157 gttcttccccaattcaaaaagcttcaaaccctaat 191  Q
    |||||||||||||||||||  ||| ||||||||||    
T  23291989 gttcttccccaattcaaaagacttaaaaccctaat 23292023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 30501321 - 30501367
Alignment:
Q  6 agtgaccaaaatttccaaggatcaaattaattgatttgtagaaaatg 52  Q
    |||||||||||||||||||||  ||||| ||||||||| ||||||||    
T  30501321 agtgaccaaaatttccaaggacgaaattgattgatttgcagaaaatg 30501367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 314 - 367
Target Start/End: Original strand, 22218719 - 22218772
Alignment:
Q  314 atctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 367  Q
    ||||| ||| || |||| |||||||||||||||||| ||||||||||| |||||    
T  22218719 atcttcaagttctatgtctaatggtgatgtgagagtacttgaatgttggtgtcc 22218772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 128; Significance: 4e-66; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 61 - 361
Target Start/End: Original strand, 11021825 - 11022125
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 160  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  11021825 tttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttc 11021924  T
Q  161 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 260  Q
    |||||||| |||||||  | |||||||||||        |||||||| |||| ||||||||  |||||||  ||||||||||| |||| || ||||||||    
T  11021925 ttccccaaatcaaaaaattgcaaaccctaattttttttaattgaatctgaaaatcaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatct 11022024  T
Q  261 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 360  Q
     ||||||||||||||||   || || |||||  |  ||| |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||    
T  11022025 aaaatgatgaggggtggtcatatggacaaaaagagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 11022124  T
Q  361 g 361  Q
    |    
T  11022125 g 11022125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 61 - 361
Target Start/End: Complemental strand, 28247974 - 28247674
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 160  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  28247974 tttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttc 28247875  T
Q  161 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 260  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||||| |||| || ||||||||    
T  28247874 ttccccaaatcaaaaaattgcaaaccctaattttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatct 28247775  T
Q  261 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 360  Q
     |||||||| | |||||   || ||||||||  |  ||| |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||    
T  28247774 aaaatgatgggaggtggtcatatgggcaaaaagagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 28247675  T
Q  361 g 361  Q
    |    
T  28247674 g 28247674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 61 - 191
Target Start/End: Complemental strand, 363485 - 363354
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 160  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||    
T  363485 tttcttccccaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaatcctcaaaatttcttccaataattagtggtaacgttc 363386  T
Q  161 ttccccaattca-aaaagcttcaaaccctaat 191  Q
    ||| |||||||| |||| ||||||||||||||    
T  363385 ttctccaattcaaaaaaacttcaaaccctaat 363354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 61 - 350
Target Start/End: Original strand, 11313127 - 11313402
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 160  Q
    |||||||| ||||||||||||||| |||||||||||||||||| | |||| ||||||||||||| |||| ||||             |||||||||||||    
T  11313127 tttcttccccaaatatataaaattagaaccctaattttacaatctttaatgtacactccaaaatccccacaatt-------------agtggtaacgttc 11313213  T
Q  161 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 260  Q
    |||||||||| ||||| || |||||||| ||        |||||||||||||   | |||  ||||||||||||||||||||| ||||||| ||||||      
T  11313214 ttccccaattaaaaaaactccaaaccctcatttttttttattgaatccgaaaactagaattcccaaaatttcttcaagcaaaactgttcaaattgaatag 11313313  T
Q  261 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtg 350  Q
     || ||||| ||||||||  || ||||||||  | | || |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  11313314 aaactgatg-ggggtgggcatatgggcaaaaagagtcatcaaagtcaagctttatcttcaagctccatgtttaatggtgatgtgagagtg 11313402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 61 - 361
Target Start/End: Complemental strand, 38149836 - 38149535
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 160  Q
    |||||| | |||||||||||||||||||||||||||||||||| |||||||||||||| |||||  ||||| |||||| |||||||||  ||| |||||     
T  38149836 tttctttcccaaatatataaaattggaaccctaattttacaatgtgtaatctacactctaaaatctccaaattttcttccaataattaagggtcacgtta 38149737  T
Q  161 ttccccaattcaaaaagcttcaaaccct-aatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatc 259  Q
    |||||||| |||||||  | |||| ||| | |        |||||||| ||||  |||||||  |||||||  ||||||||||| |||| || |||||||    
T  38149736 ttccccaaatcaaaaaattgcaaatcctgatttttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatc 38149637  T
Q  260 tgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgt 359  Q
    | |||||||| | |||||   || ||||||||  |  ||| |||||||||||| ||||| |  ||||||||||||||||||||||||| ||||| |||||    
T  38149636 taaaatgatgggaggtggtcatatgggcaaaaagagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagaatgcttaaatgt 38149537  T
Q  360 tg 361  Q
    ||    
T  38149536 tg 38149535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 61 - 191
Target Start/End: Complemental strand, 7745062 - 7744932
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 160  Q
    |||||| | ||||| |||||||||| ||||||||||||||||| | ||||| |||||||||||||||||||| ||||| |||||||||||||||||||||    
T  7745062 tttctttcccaaatgtataaaattgaaaccctaattttacaatctttaatccacactccaaaattcccaaaaattcttccaataattagtggtaacgttc 7744963  T
Q  161 ttccccaattcaaaaagcttcaaaccctaat 191  Q
    |||||||||| ||| | | ||||||||||||    
T  7744962 ttccccaattgaaataacctcaaaccctaat 7744932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 59 - 366
Target Start/End: Original strand, 10715400 - 10715690
Alignment:
Q  59 tctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgt 158  Q
    ||||| |||| |||||||||||||||||||||||||||||||||| | |||||||| ||  ||||||||||||||| ||| | ||||||||  |||||||    
T  10715400 tcttttttccccaaatatataaaattggaaccctaattttacaatctttaatctaccctaaaaaattcccaaaattccttccgataattagcagtaacgt 10715499  T
Q  159 tcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaat 258  Q
    | || ||||||||||||| ||||||||||||||        ||||||||| |||   | |||| ||||||||||||||||||||| ||||||| ||||||    
T  10715500 tgtt-cccaattcaaaaaacttcaaaccctaat--ttttttattgaatccaaaaactagaatccccaaaatttcttcaagcaaaactgttcaaattgaat 10715596  T
Q  259 ctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatg 358  Q
      |||||||||  |||||||  || || |||||  | |||| ||||||             |||||||||||||||||||| ||||||||||||||||||    
T  10715597 tcgaaatgatg-cgggtgggcatatggacaaaaagagttatcaaagtc-------------aagctccatgtttaatggtgctgtgagagtgcttgaatg 10715682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 58 - 191
Target Start/End: Complemental strand, 17948734 - 17948601
Alignment:
Q  58 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 157  Q
    ||||||||| | ||||| |||||||||| ||||||||||||||||| | ||||| |||||||||||||||||||| ||||| |||||||| |||||||||    
T  17948734 ctctttctttcccaaatgtataaaattgaaaccctaattttacaatctttaatccacactccaaaattcccaaaaattcttccaataattggtggtaacg 17948635  T
Q  158 ttcttccccaattcaaaaagcttcaaaccctaat 191  Q
    ||||||||||||| ||| | | ||||||||||||    
T  17948634 ttcttccccaattgaaataacctcaaaccctaat 17948601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 57 - 361
Target Start/End: Complemental strand, 37418569 - 37418263
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    |||||||||||| ||| | ||||| |||||||||||||||  ||||| || ||| ||||||| |||||  ||||||| || | |||| || | ||||       
T  37418569 gctctttcttccccaattgtataacattggaaccctaattacacaatctgcaatttacactctaaaatcaccaaaatatcctccaattataaatggtcca 37418470  T
Q  157 gttcttccccaattcaaaaagcttcaaaccctaa-tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttg 255  Q
    ||||||| |||||||||||| ||||||||||||| |        |||||||  ||||  |||||||  |||| |||||| |||||||| | || || |||    
T  37418469 gttcttcgccaattcaaaaaacttcaaaccctaatttttttcgtattgaatttgaaagccaaaatcctcaaagtttcttgaagcaaaactattgaaattg 37418370  T
Q  256 aatctgaaatgatgaggggtgggtgtaagg-gcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttg 354  Q
    |||||||||||||| ||||||||  || ||   |||| || ||||||||||| || || |||||  |||| || ||||||||||| ||||||||||||||    
T  37418369 aatctgaaatgatggggggtgggaatatggaaaaaaaacagttatgaaagtcgagtttcatcttcgagcttcaagtttaatggtgttgtgagagtgcttg 37418270  T
Q  355 aatgttg 361  Q
    |||||||    
T  37418269 aatgttg 37418263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 61 - 367
Target Start/End: Original strand, 35575 - 35881
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 160  Q
    |||||||| ||| | ||||||||| ||||| |||||  ||||| || ||| ||||||| | |||    |||||||| | ||||||| ||||||   ||||    
T  35575 tttcttccccaattgtataaaattcgaaccttaattacacaatctgcaatatacactctataatcatgaaaatttcctccaataataagtggttcagttc 35674  T
Q  161 ttccccaattcaaaaagcttcaaaccctaatannnnnnn-attgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatc 259  Q
    | |||||||||||||| ||||||||||||||         | |||||| ||||  || ||||  ||||||||||| |||||||| | || || |||||||    
T  35675 tgccccaattcaaaaaacttcaaaccctaatttttttcgtagtgaatctgaaagccagaatcctcaaaatttcttgaagcaaaactattgaaattgaatc 35774  T
Q  260 tgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgt 359  Q
    |||||||||| || |||||  || ||  |||| |  |||||||||| ||| || ||||| |||||||| ||||||||||| |||||||||||||||||||    
T  35775 tgaaatgatgtggagtgggaatatggaaaaaa-cggttatgaaagttaagtttcatcttcaagctccaagtttaatggtgttgtgagagtgcttgaatgt 35873  T
Q  360 tgatgtcc 367  Q
    || |||||    
T  35874 tggtgtcc 35881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 61 - 184
Target Start/End: Original strand, 2359394 - 2359516
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 160  Q
    |||||||| ||||| |||||||||| ||||||||||||||||| ||| ||||| | ||||||| ||||||||||||| ||| |||||  ||  |||||||    
T  2359394 tttcttccccaaatctataaaattgaaaccctaattttacaatttgtcatctagagtccaaaa-tcccaaaatttctatcattaattgatgacaacgttc 2359492  T
Q  161 ttccccaattcaaaaagcttcaaa 184  Q
    ||||||||||| |||| |||||||    
T  2359493 ttccccaattctaaaaacttcaaa 2359516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 58 - 361
Target Start/End: Complemental strand, 42880610 - 42880309
Alignment:
Q  58 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 157  Q
    ||||||||||| ||| | ||||| |||| ||||||||||  ||||| || ||| ||||||| |||||  ||||||| || | |||| || | ||||   |    
T  42880610 ctctttcttccccaattgtataacattgaaaccctaattacacaatctgcaatttacactctaaaatcaccaaaatatcctccaattataaatggtccag 42880511  T
Q  158 ttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaa 257  Q
    ||||||||||||| ||||| ||||||||||||||        ||| |||  ||||  |||||||  ||||||||||| |||||||| | || || |||||    
T  42880510 ttcttccccaatttaaaaaacttcaaaccctaattttttcgtattaaatttgaaagccaaaatcctcaaaatttcttgaagcaaaactattgaaattgaa 42880411  T
Q  258 tctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaat 357  Q
    || ||||| ||| ||| ||||  || ||| |||| || ||||||||||| ||||| |||||| ||||| | |||||||||||   || ||||||||||||    
T  42880410 tcagaaatcatgggggttgggaatatgggaaaaaacagttatgaaagtcgagcttcatctttgagctctaagtttaatggtg--ttgcgagtgcttgaat 42880313  T
Q  358 gttg 361  Q
    ||||    
T  42880312 gttg 42880309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 191
Target Start/End: Original strand, 34400628 - 34400762
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    |||||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | | | | | |||||| ||| ||||||||| ||  ||||  ||  ||     
T  34400628 gctctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacccagagttcaaaatcccccaaatttcttccatgaattgatgtcaat 34400727  T
Q  157 gttcttccccaattcaaaaagcttcaaaccctaat 191  Q
    |||||||||||||||||||| ||| ||||||||||    
T  34400728 gttcttccccaattcaaaaaacttaaaaccctaat 34400762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 191
Target Start/End: Original strand, 42517877 - 42518011
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    |||||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||| || |||||| ||  ||||  ||  ||     
T  42517877 gctctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatcccccaattttcttccatgaattgatgtcaat 42517976  T
Q  157 gttcttccccaattcaaaaagcttcaaaccctaat 191  Q
    |||||||||||||||||||| ||| ||||||||||    
T  42517977 gttcttccccaattcaaaaaacttaaaaccctaat 42518011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 63 - 191
Target Start/End: Complemental strand, 15373683 - 15373554
Alignment:
Q  63 tcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggta-acgttct 161  Q
    |||||| ||| | |||||||||||||||||||||  ||||| | ||||||||| || || ||  || ||||||| | ||||||| ||||||  | |||||    
T  15373683 tcttccccaattgtataaaattggaaccctaattacacaatctataatctacattctaatatcacctaaatttcctccaataataagtggtccaagttct 15373584  T
Q  162 tccccaattcaaaaagcttcaaaccctaat 191  Q
    ||||||||||||||| ||| ||||||||||    
T  15373583 tccccaattcaaaaaacttaaaaccctaat 15373554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 158 - 318
Target Start/End: Original strand, 40150664 - 40150825
Alignment:
Q  158 ttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaag-caaaattgttcaatttga 256  Q
    ||||||||| |||| |||| |||||||||||| |        ||||||||| |||| |||||||  ||||||||||||||  ||||||||||||  ||||    
T  40150664 ttcttcccctattctaaaaacttcaaaccctattttgttttcattgaatccaaaatccaaaatcttcaaaatttcttcaaatcaaaattgttcagattga 40150763  T
Q  257 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctt 318  Q
    |||| |||||||| | |||||  ||| |||||||| ||||| | ||||||||| || |||||    
T  40150764 atctaaaatgatgggtggtggccgtatgggcaaaaacaattctcaaagtcaagtttcatctt 40150825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 57 - 269
Target Start/End: Complemental strand, 40152346 - 40152135
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    |||||||||| | ||||| |||||||||| ||||| |||||| |||| | | ||||||  ||||||||  ||| |||||||| || ||||||     |||    
T  40152346 gctctttctttcccaaatctataaaattgaaacccaaatttttcaatctctcatctacggtccaaaatctccacaatttcttccattaattaac---aac 40152250  T
Q  157 g--ttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaattt 254  Q
       |||||||||||||| |||| ||| ||||||||||        |||||||||||||| |||||||   ||||||||||||| ||||||||||||  ||    
T  40152249 catttcttccccaattctaaaaacttaaaaccctaatttgatttgattgaatccgaaatccaaaatcctgaaaatttcttcaaccaaaattgttcagatt 40152150  T
Q  255 gaatctgaaatgatg 269  Q
    |||||  ||||||||    
T  40152149 gaatccaaaatgatg 40152135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 190
Target Start/End: Complemental strand, 17697903 - 17697776
Alignment:
Q  58 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 157  Q
    ||||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||||||||||| ||| |||| |  |||    |    
T  17697903 ctctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatccccaaaatttc-ttccataaatgatgg----g 17697809  T
Q  158 ttcttccccaattcaaaaagcttcaaaccctaa 190  Q
    ||||||||||||||||||| ||| |||||||||    
T  17697808 ttcttccccaattcaaaaaacttaaaaccctaa 17697776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 57 - 191
Target Start/End: Original strand, 19907036 - 19907170
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    |||||||||||| |||||||||||| | ||||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  ||     
T  19907036 gctctttcttccccaaatatataaattcggaaccctaatgttataatttgttacctagagttcaaaatcccccaaatttcttacatgaattgatgtcaat 19907135  T
Q  157 gttcttccccaattcaaaaagcttcaaaccctaat 191  Q
    ||||||| |||||||||||| ||| ||||||||||    
T  19907136 gttcttcaccaattcaaaaaacttaaaaccctaat 19907170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 224 - 342
Target Start/End: Complemental strand, 42003108 - 42002990
Alignment:
Q  224 caaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagc 323  Q
    ||||||||||| |||||||| | || || |  |||||||||||||  ||||||||  || ||| |||| |  ||||||||||| ||||| ||||| ||||    
T  42003108 caaaatttcttgaagcaaaactattgaaataaaatctgaaatgatagggggtgggaatatgggaaaaaactgttatgaaagtcgagcttcatcttcaagc 42003009  T
Q  324 tccatgtttaatggtgatg 342  Q
    |||| ||||||||||||||    
T  42003008 tccaagtttaatggtgatg 42002990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 63 - 191
Target Start/End: Complemental strand, 41708225 - 41708097
Alignment:
Q  63 tcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttctt 162  Q
    |||||| ||| | |||||||||||||||||||||  ||||| | ||||||||| || || ||  || ||||||| | | ||||| ||||||   ||||||    
T  41708225 tcttccccaattgtataaaattggaaccctaattacacaatctataatctacattctaatatcacctaaatttcctcccataataagtggtccagttctt 41708126  T
Q  163 ccccaattcaaaaagcttcaaaccctaat 191  Q
    || ||||||||||| ||| ||||||||||    
T  41708125 cctcaattcaaaaaacttaaaaccctaat 41708097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 191
Target Start/End: Original strand, 26581316 - 26581430
Alignment:
Q  77 ataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaa 176  Q
    |||| ||| ||| |||||||||| ||| ||| | ||| | | |||||||||||||||||||| || |||||  ||  |||| | ||||||||||||||||    
T  26581316 ataagattagaatcctaattttataatttgtcacctagagttcaaaattcccaaaatttcttccattaattgatgacaacgctgttccccaattcaaaaa 26581415  T
Q  177 gcttcaaaccctaat 191  Q
     ||||||| ||||||    
T  26581416 acttcaaaacctaat 26581430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 57 - 138
Target Start/End: Original strand, 16377082 - 16377163
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctt 138  Q
    |||||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||||| | |||||| | | |||||||||    
T  16377082 gctctttcttccccaaatatataaatttggaaccctaatgttataatttgttacctacagttcaaaatcctctaaatttctt 16377163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 58 - 113
Target Start/End: Complemental strand, 4047758 - 4047703
Alignment:
Q  58 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatcta 113  Q
    ||||||||||| ||||| |||||||||| ||||||||||||| ||| ||| |||||    
T  4047758 ctctttcttccccaaatctataaaattgaaaccctaattttataatttgtcatcta 4047703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 72
Target Start/End: Complemental strand, 363547 - 363509
Alignment:
Q  34 aattgatttgtagaaaatgctttgctctttcttcctcaa 72  Q
    |||||||||| |||||||| |||||||||||||||||||    
T  363547 aattgatttgcagaaaatgttttgctctttcttcctcaa 363509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 99
Target Start/End: Complemental strand, 161854 - 161813
Alignment:
Q  58 ctctttcttcctcaaatatataaaattggaaccctaatttta 99  Q
    ||||||||||| |||||||| ||| |||||||||||||||||    
T  161854 ctctttcttccccaaatataaaaatttggaaccctaatttta 161813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 2359587 - 2359542
Alignment:
Q  58 ctctttcttcctcaaatatataaaattggaaccctaattttacaat 103  Q
    ||||||||||| ||||| ||| |||||||||||||||||| |||||    
T  2359587 ctctttcttccccaaatctattaaattggaaccctaatttgacaat 2359542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 191
Target Start/End: Original strand, 14387765 - 14387837
Alignment:
Q  119 caaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagcttcaaaccctaat 191  Q
    |||||| ||||||||||||| ||||||||  ||  ||  ||||||||||||||||||| |||  |||||||||    
T  14387765 caaaatccccaaaatttcttccaataattgatgtcaattttcttccccaattcaaaaaacttagaaccctaat 14387837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 191
Target Start/End: Complemental strand, 31474847 - 31474719
Alignment:
Q  63 tcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttctt 162  Q
    |||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||  | | |||||| | ||| ||||||| ||  ||||||||  || | ||||    
T  31474847 tcttccccaaatatataaatttggaaccctaatattataatttgtgaccttgagttcaaaatcctcaagatttcttccatgaattagtgacaaagatctt 31474748  T
Q  163 ccccaattcaaaaagcttcaaaccctaat 191  Q
     ||||||||||||| | | ||||||||||    
T  31474747 tcccaattcaaaaaacctaaaaccctaat 31474719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 128; Significance: 4e-66; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 61 - 361
Target Start/End: Complemental strand, 5784666 - 5784366
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 160  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  5784666 tttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttc 5784567  T
Q  161 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 260  Q
    |||||||| |||||||  | |||||||||||        |||||||| |||| ||||||||  |||||||  ||||||||||| |||| || ||||||||    
T  5784566 ttccccaaatcaaaaaattgcaaaccctaattttttttaattgaatctgaaaatcaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatct 5784467  T
Q  261 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 360  Q
     ||||||||||||||||   || || |||||  |  ||| |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||    
T  5784466 aaaatgatgaggggtggtcatatggacaaaaagagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 5784367  T
Q  361 g 361  Q
    |    
T  5784366 g 5784366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 58 - 367
Target Start/End: Original strand, 42558248 - 42558546
Alignment:
Q  58 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 157  Q
    ||||||||||| ||||| || ||||||||||||||||||||||||| ||| |||||          |  |||||| ||||| || |||||| ||   |||    
T  42558248 ctctttcttccccaaatctagaaaattggaaccctaattttacaatctgtcatcta----------tctccaaaaattcttccattaattaatgacgacg 42558337  T
Q  158 ttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaa 257  Q
    ||||| |||||||| |||| ||||||||||||||        ||||||||| |||| |||||||  ||||||||||||||||| |||||||||  |||||    
T  42558338 ttctttcccaattctaaaaacttcaaaccctaat-tcttttgattgaatccaaaatccaaaatccgcaaaatttcttcaagcataattgttcagattgaa 42558436  T
Q  258 tctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaat 357  Q
    |||||||||||| | |||||| ||| |||||||| || |||| ||| |  ||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  42558437 tctgaaatgatgggtggtgggcgtatgggcaaaatcagttatcaaatttgagcttcatcttcaagctccatgtttaatggtgatgtgagagtgcttgaat 42558536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 61 - 291
Target Start/End: Complemental strand, 51123342 - 51123115
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 160  Q
    |||||||||||||| ||||||||||||||||||||||||||||   ||||| |||||||||||||||||||| ||||| |||||||||| ||||||||||    
T  51123342 tttcttcctcaaatgtataaaattggaaccctaattttacaatcattaatccacactccaaaattcccaaaaattcttccaataattagaggtaacgttc 51123243  T
Q  161 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 260  Q
    |||||||||| ||| | | ||||||||||||        ||||||||||||    |||||| |||||||| ||||||  |||| ||||  | ||||||||    
T  51123242 ttccccaattgaaataacctcaaaccctaat--tttttgattgaatccgaatcaaaaaatccccaaaattccttcaaataaaactgttgtaattgaatct 51123145  T
Q  261 gaaatgatgaggggtgggtgtaagggcaaaa 291  Q
    ||||||||| |||||||||||| ||||||||    
T  51123144 gaaatgatg-ggggtgggtgtatgggcaaaa 51123115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 61 - 361
Target Start/End: Original strand, 11152837 - 11153136
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 160  Q
    |||||||| ||||| |||||||||||||||||||||||||||| | ||||||||||||||||||  ||||| |||||| |||||||||  ||| | ||||    
T  11152837 tttcttccccaaatgtataaaattggaaccctaattttacaatgtttaatctacactccaaaatctccaaattttcttccaataattaagggtcatgttc 11152936  T
Q  161 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 260  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||   ||||||  |||||||  ||||||||||| |||| || ||||||||    
T  11152937 ttccccaaatcaaaaaattgcaaaccctaattttttttaattgaatctgaaaactaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatct 11153036  T
Q  261 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 360  Q
     |||||||| |||||||   || ||||||||  |  ||| |||||||| ||| ||||| |  ||||||||||||||||||||||||| ||||||| ||||    
T  11153037 aaaatgatg-ggggtggtcatatgggcaaaaagagctatcaaagtcaaacttcatcttcatcctccatgtttaatggtgatgtgagaatgcttgagtgtt 11153135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 74 - 191
Target Start/End: Complemental strand, 25172818 - 25172701
Alignment:
Q  74 tatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaa 173  Q
    ||||||||||| |||||||||||||||||| | |||| ||| |||||||||  |||||||||||| ||||||||||||||||||||||||||||||| ||    
T  25172818 tatataaaattagaaccctaattttacaatctttaatgtacgctccaaaatctccaaaatttcttccaataattagtggtaacgttcttccccaatttaa 25172719  T
Q  174 aaagcttcaaaccctaat 191  Q
    |||  |||||||||||||    
T  25172718 aaaaattcaaaccctaat 25172701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 57 - 367
Target Start/End: Complemental strand, 31803500 - 31803190
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    |||||||||||| ||| | ||||||||||||||  |||||  ||||| || ||||||||||| | |||    |||||||| | ||||||| ||||||       
T  31803500 gctctttcttccccaattgtataaaattggaacgttaattacacaatctgcaatctacactctataatcatgaaaatttcctccaataataagtggttca 31803401  T
Q  157 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnn-attgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttg 255  Q
    ||||| |||||||||||||| ||||||||||||||         | |||||| ||||  || ||||  ||||||||||| |||||||| | || || |||    
T  31803400 gttctgccccaattcaaaaaacttcaaaccctaatttttttcgtagtgaatctgaaagccagaatcctcaaaatttcttgaagcaaaactattgaaattg 31803301  T
Q  256 aatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttga 355  Q
    |||||||||||||| ||||||||  || ||  |||| |  |||||||||||||| || ||||| |||||||| ||||||| ||| |||||||||||||||    
T  31803300 aatctgaaatgatgtggggtgggaatatggaaaaaa-cggttatgaaagtcaagtttcatcttcaagctccaagtttaatagtgttgtgagagtgcttga 31803202  T
Q  356 atgttgatgtcc 367  Q
    |||||| |||||    
T  31803201 atgttggtgtcc 31803190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 57 - 367
Target Start/End: Original strand, 46637056 - 46637365
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    |||||||||||| ||| | ||||||||||||||| |||||  ||||| || ||||||||||| | |||    |||||||| | ||||||| ||||||       
T  46637056 gctctttcttccccaatt-tataaaattggaaccttaattacacaatctgcaatctacactctataatcatgaaaatttcctccaataataagtggttca 46637154  T
Q  157 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnn-attgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttg 255  Q
    ||||| |||||||||||||| ||||||||||||||         | |||||  ||||  || ||||  ||||||||||| |||||||| | || || |||    
T  46637155 gttctaccccaattcaaaaaacttcaaaccctaatttttttcgtagtgaatttgaaagccagaatcctcaaaatttcttgaagcaaaactattgaaattg 46637254  T
Q  256 aatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttga 355  Q
    ||||| |||||||| ||||||||  || ||  |||| |  ||||||||||||||||| ||||| |||||||| ||||||||||| |||||||||||||||    
T  46637255 aatctaaaatgatgtggggtgggaatatggaaaaaa-cggttatgaaagtcaagcttcatcttcaagctccaagtttaatggtgttgtgagagtgcttga 46637353  T
Q  356 atgttgatgtcc 367  Q
    |||||| |||||    
T  46637354 atgttggtgtcc 46637365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 57 - 342
Target Start/End: Original strand, 45379374 - 45379658
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    ||||| |||||| ||| | ||||||||| |||||||||||  ||||| || |||||||| || |||||  || ||||||| | ||||||| ||||||       
T  45379374 gctctgtcttccccaattgtataaaattagaaccctaattacacaatttgcaatctacattctaaaatcacctaaatttcctccaataataagtggtcta 45379473  T
Q  157 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 256  Q
    |||||||||||||||| ||| ||| ||||||||||        |||||||| ||||  |||||||  ||||||||||| |||||||| | || || ||||    
T  45379474 gttcttccccaattcagaaaacttgaaaccctaatttttttgtattgaatctgaaagccaaaatccacaaaatttcttgaagcaaaactattgaaattga 45379573  T
Q  257 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatg 342  Q
    ||||||||||| | ||||||||  || ||| ||||    ||||||||||| ||||| |||||||||||||| |||||| |||||||    
T  45379574 atctgaaatgaag-ggggtgggaatatgggaaaaaattgttatgaaagtcgagcttcatctttaagctccaagtttaacggtgatg 45379658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 63 - 342
Target Start/End: Complemental strand, 44159088 - 44158807
Alignment:
Q  63 tcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttctt 162  Q
    |||||| ||| | |||||||||| |||||| |||  ||||| || |||||||| || |||||  || ||||||| | ||||||| |||||| | ||||||    
T  44159088 tcttccccaattgtataaaattgaaaccctgattacacaatctgcaatctacattctaaaatcacctaaatttcctccaataataagtggtcaagttctt 44158989  T
Q  163 ccccaattcaaaaagcttcaaaccctaatannnnnnn--attgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 260  Q
    |||||||||||||| ||| ||||||||||          |||||||| ||||  |||||||  ||||||||||| |||||||| | || || ||||||||    
T  44158988 ccccaattcaaaaaacttgaaaccctaattttttttcgtattgaatctgaaagccaaaatccacaaaatttcttgaagcaaaactattgaaattgaatct 44158889  T
Q  261 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatg 342  Q
    ||||||| | ||||||||  || ||| ||||  | ||||||||||| ||||| ||||| ||||| || ||||||||||||||    
T  44158888 gaaatgaaggggggtgggattatgggaaaaaatagttatgaaagtcgagcttcatcttcaagcttcaagtttaatggtgatg 44158807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 57 - 342
Target Start/End: Complemental strand, 42136045 - 42135761
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    ||||| |||||| ||| | ||||||||||||| |||||||  ||||| || |||||||| || |||||  || ||||||  | ||||||| |||| |       
T  42136045 gctctatcttccccaattgtataaaattggaatcctaattacacaatctgcaatctacattctaaaatcacctaaattttctccaataataagtgctcca 42135946  T
Q  157 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 256  Q
    |||||||||||||||||||| ||| ||||| ||||        |||||||| |||| |||||||   ||||||||||| |||||||| | || || ||||    
T  42135945 gttcttccccaattcaaaaaacttgaaacc-taattttttcgtattgaatctgaaagtcaaaattcacaaaatttcttgaagcaaaactattgaaattga 42135847  T
Q  257 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatg 342  Q
    ||||||||||| | ||||||||  || ||| ||||    ||||||||||| ||||| ||||| |||||||| ||||||||||||||    
T  42135846 atctgaaatgaaggggggtgggaatatgggaaaaaattgttatgaaagtcgagcttcatcttcaagctccaagtttaatggtgatg 42135761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 57 - 189
Target Start/End: Complemental strand, 6576906 - 6576774
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    |||||||||||| ||| | |||||||||||||||||||||  ||||| || ||||||||||| |||||  || ||||||| | ||||||| ||||||       
T  6576906 gctctttcttccccaattgtataaaattggaaccctaattaaacaatctgcaatctacactctaaaatcacctaaatttcctccaataataagtggtcca 6576807  T
Q  157 gttcttccccaattcaaaaagcttcaaacccta 189  Q
    ||| || ||||||||||||| ||||||||||||    
T  6576806 gttttttcccaattcaaaaaacttcaaacccta 6576774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 224 - 367
Target Start/End: Original strand, 18183063 - 18183205
Alignment:
Q  224 caaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagc 323  Q
    ||||||||||| |||||||| | || || ||| ||||||||||||| ||||||||   | ||| |||| || ||||||||||| || || ||||| ||||    
T  18183063 caaaatttcttgaagcaaaactattgaaattggatctgaaatgatg-ggggtgggaacatgggaaaaaacagttatgaaagtcgagtttcatcttcaagc 18183161  T
Q  324 tccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 367  Q
    |||| |||||||||||||||||||  |||||||||||| |||||    
T  18183162 tccaagtttaatggtgatgtgagaaagcttgaatgttggtgtcc 18183205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 57 - 342
Target Start/End: Original strand, 35478378 - 35478660
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    |||||||||||||||| | | |||||||| ||||||||||  ||||| |   |||||||||| |||||  || ||||||| | ||||||| ||||||       
T  35478378 gctctttcttcctcaattgtttaaaattgaaaccctaattacacaatct---atctacactctaaaatcacctaaatttcctccaataataagtggttta 35478474  T
Q  157 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 256  Q
    ||| |||||||||||||||| ||||||||||||||        ||||||||  |||  |||||||  ||||| ||||| |||||||| | || || |  |    
T  35478475 gtttttccccaattcaaaaaacttcaaaccctaattttttcgtattgaatcttaaaaccaaaatcctcaaaacttcttgaagcaaaactattgaaataaa 35478574  T
Q  257 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatg 342  Q
    |||  |||||||| ||||||||  || ||| ||||    ||||||||||| ||||| ||||| ||||| || ||||||||||||||    
T  35478575 atccaaaatgatggggggtgggaatatgggaaaaaattgttatgaaagtcgagcttcatcttgaagcttcaagtttaatggtgatg 35478660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 57 - 191
Target Start/End: Original strand, 50554500 - 50554634
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    |||||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||| ||| |||||| ||| ||||||||| ||  ||||  ||  ||     
T  50554500 gctctttcttccccaaatatataaatttggaaccctaatgttataatttgttacctagacttcaaaatcccccaaatttcttacatgaattgatgtcaat 50554599  T
Q  157 gttcttccccaattcaaaaagcttcaaaccctaat 191  Q
    |||||||||||||||||||| ||| ||||||||||    
T  50554600 gttcttccccaattcaaaaaacttaaaaccctaat 50554634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 188
Target Start/End: Original strand, 33679549 - 33679680
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    |||||||||||||||| | || ||||||||||||||||||  ||||| || ||| ||||||| |||||  || ||||||| | ||||||| | | ||       
T  33679549 gctctttcttcctcaattgtacaaaattggaaccctaattacacaatctgcaatatacactctaaaatcacctaaatttcctccaataataactagtcca 33679648  T
Q  157 gttcttccccaattcaaaaagcttcaaaccct 188  Q
    |||||||||||||||||||| |||||||||||    
T  33679649 gttcttccccaattcaaaaaacttcaaaccct 33679680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 57 - 191
Target Start/End: Original strand, 31237139 - 31237273
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    |||||||||||| |||||||||||  ||||||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| || |||||  ||  ||     
T  31237139 gctctttcttccccaaatatataattttggaaccctaatgttataatttgttacctagagttcaaaatcccccaaatttcttccattaattgatgtcaat 31237238  T
Q  157 gttcttccccaattcaaaaagcttcaaaccctaat 191  Q
    |||||||||||||||||||| ||| ||||||||||    
T  31237239 gttcttccccaattcaaaaaacttaaaaccctaat 31237273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 58 - 191
Target Start/End: Original strand, 18058121 - 18058254
Alignment:
Q  58 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 157  Q
    ||||||||||| ||||| ||||||||||||||| |||||||||||| ||| ||||| | | |||||| | ||||| |||||  | |||||  ||  |||     
T  18058121 ctctttcttccccaaatttataaaattggaaccttaattttacaatttgtcatctagagttcaaaatcctcaaaacttcttcaattaattgatgacaaca 18058220  T
Q  158 ttcttccccaattcaaaaagcttcaaaccctaat 191  Q
    |||||||||||||| |||| ||||||| ||||||    
T  18058221 ttcttccccaattctaaaaacttcaaaacctaat 18058254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 191
Target Start/End: Complemental strand, 15106116 - 15105986
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 160  Q
    |||||||| |||||||||||| |||||| |||||| ||| |||  || | ||||| | |||||| ||||||||||||| ||  ||||  ||  || ||||    
T  15106116 tttcttccccaaatatataaatttggaatcctaatgttataattcgtcacctacagttcaaaatccccaaaatttcttacatgaattgatgccaaagttc 15106017  T
Q  161 ttccccaattcaaaaagcttcaaaccctaat 191  Q
    |||||||||||||||| ||| ||||||||||    
T  15106016 ttccccaattcaaaaaacttaaaaccctaat 15105986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 58 - 191
Target Start/End: Original strand, 6817200 - 6817333
Alignment:
Q  58 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 157  Q
    ||||||||||| |||||||||||| || |||||||||| ||| ||| ||| | ||| | | ||||||||| |||||||||| ||  ||||  ||  || |    
T  6817200 ctctttcttccccaaatatataaatttagaaccctaatgttataatttgttacctagagttcaaaattcctaaaatttcttccatgaattgatgtcaatg 6817299  T
Q  158 ttcttccccaattcaaaaagcttcaaaccctaat 191  Q
    ||||||||||||||||||  ||| ||||||||||    
T  6817300 ttcttccccaattcaaaagacttaaaaccctaat 6817333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 190
Target Start/End: Original strand, 18180818 - 18180900
Alignment:
Q  108 aatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagcttcaaaccctaa 190  Q
    |||||||||||||||||  |||||||||| | || |||| ||||||    ||||||||||||||||||| |||||||||||||    
T  18180818 aatctacactccaaaatcaccaaaatttcctccagtaataagtggtccgattcttccccaattcaaaaaacttcaaaccctaa 18180900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 191
Target Start/End: Original strand, 45045232 - 45045365
Alignment:
Q  58 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 157  Q
    ||||||||||| |||||||||||| ||||||||||||| ||| ||| | | |  || | | |||||| ||| ||||||||| ||  ||||  ||  || |    
T  45045232 ctctttcttccccaaatatataaatttggaaccctaatgttataatttatcacatagagttcaaaatcccccaaatttcttccatgaattgatgtcaatg 45045331  T
Q  158 ttcttccccaattcaaaaagcttcaaaccctaat 191  Q
    ||||||||||||||||||| ||| ||||||||||    
T  45045332 ttcttccccaattcaaaaaacttaaaaccctaat 45045365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 191
Target Start/End: Complemental strand, 27952282 - 27952167
Alignment:
Q  76 tataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaa 175  Q
    |||||||||| ||||||||||  ||||| | ||||||||| || || ||  |  ||||||| | ||||||| ||||||   |||||||||||||||||||    
T  27952282 tataaaattgtaaccctaattacacaatttttaatctacattctaatatcacttaaatttcctccaataataagtggtccagttcttccccaattcaaaa 27952183  T
Q  176 agcttcaaaccctaat 191  Q
    | ||| ||||||||||    
T  27952182 aacttaaaaccctaat 27952167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 191
Target Start/End: Complemental strand, 2870845 - 2870712
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    |||||||||| | ||||||||| || ||||||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  ||     
T  2870845 gctctttctttcccaaatatatcaatttggaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatgtcaat 2870746  T
Q  157 gttcttccccaattcaaaaagcttcaaaccctaat 191  Q
    |||||||||||||||||||| ||| ||||||||||    
T  2870745 gttcttccccaattcaaaaa-cttaaaaccctaat 2870712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 191
Target Start/End: Original strand, 3012175 - 3012309
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    |||||||||||| |||||||||||| ||||||||||||| ||  ||| ||| | ||| | | ||||||   | ||||||||| ||  ||||  ||  ||     
T  3012175 gctctttcttccccaaatatataaatttggaaccctaatgttctaatttgtcacctatagttcaaaatctaccaaatttcttccatgaattgatgtcaat 3012274  T
Q  157 gttcttccccaattcaaaaagcttcaaaccctaat 191  Q
    |||||||||||||||||||| ||| ||||||||||    
T  3012275 gttcttccccaattcaaaaaacttaaaaccctaat 3012309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 342
Target Start/End: Original strand, 33679696 - 33679814
Alignment:
Q  224 caaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagc 323  Q
    ||||||||||| |||||||| | || || |  |||| ||||||||| ||||||||  ||  || |||| |  ||||||||||| ||||| ||||| ||||    
T  33679696 caaaatttcttgaagcaaaactattgaaataaaatccgaaatgatggggggtgggaatataggaaaaaactgttatgaaagtcgagcttcatcttcaagc 33679795  T
Q  324 tccatgtttaatggtgatg 342  Q
    |||| ||||||||||||||    
T  33679796 tccaagtttaatggtgatg 33679814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 99
Target Start/End: Original strand, 33599542 - 33599580
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaatttta 99  Q
    |||||||| |||||||||||| |||||||||||||||||    
T  33599542 tttcttccacaaatatataaatttggaaccctaatttta 33599580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 126; Significance: 7e-65; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 11031643 - 11031828
Alignment:
Q  6 agtgaccaaaatttccaaggatcaaattaattgatttgtagaaaatgctttgctctttcttcctcaaatatataaaattggaaccctaattttacaatat 105  Q
    |||||||||||||||||||||  ||||| ||||||||| | |||||| |||||| |||||||| ||||||||||||||||||| |||||||||||||| |    
T  11031643 agtgaccaaaatttccaaggactaaatttattgatttgcataaaatgttttgctttttcttccccaaatatataaaattggaagcctaattttacaatct 11031742  T
Q  106 gtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagcttcaaaccctaat 191  Q
     |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  11031743 ataatctacactccaaaatccccaaaatttcttccaataattagtggtaacgttcttccctaattcaaaaaacttcaaaccctaat 11031828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 61 - 361
Target Start/End: Original strand, 40019448 - 40019748
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 160  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||||  ||||| |||||| |||||||||  ||| ||||||    
T  40019448 tttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacaccccaaaatctccaaattttcttccaataattaagggtcacgttc 40019547  T
Q  161 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 260  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||||| |||| || ||||||||    
T  40019548 ttccccaaatcaaaaaattgcaaaccctaattttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatct 40019647  T
Q  261 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 360  Q
     |||||||| | |||||   || ||||||||  |  ||| |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||    
T  40019648 aaaatgatgggaggtggtcatatgggcaaaaagagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 40019747  T
Q  361 g 361  Q
    |    
T  40019748 g 40019748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 58 - 269
Target Start/End: Original strand, 25356622 - 25356834
Alignment:
Q  58 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 157  Q
    ||||||||||| ||||||||||||| |||||| |||||| ||| |||||||||||||||||||||||  |||||||||||| ||||||| ||||||||||    
T  25356622 ctctttcttccccaaatatataaaactggaactctaattatactatatgtaatctacactccaaaatcaccaaaatttcttccaataataagtggtaacg 25356721  T
Q  158 ttcttccccaattcaaaaagcttcaaaccctaa-tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 256  Q
    ||||||||||||||||||| ||||||||||||| |        |||||||| ||||| ||||||| |||||||||||| |||||||| | || || ||||    
T  25356722 ttcttccccaattcaaaaaacttcaaaccctaatttcttttttattgaatctgaaatccaaaatccccaaaatttcttgaagcaaaactattgaaattga 25356821  T
Q  257 atctgaaatgatg 269  Q
    ||| |||||||||    
T  25356822 atcagaaatgatg 25356834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 57 - 367
Target Start/End: Original strand, 33369050 - 33369362
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    |||||||||||| |||||||||||||||||||||||||||  | ||| || |||||||||||||||||  |||||| ||||| ||||||| ||||||       
T  33369050 gctctttcttccccaaatatataaaattggaaccctaattacataatctgcaatctacactccaaaatcaccaaaacttcttccaataataagtggtcca 33369149  T
Q  157 gttcttccccaattcaaaaagcttcaaaccctaa--tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaattt 254  Q
    |||||||||||||||||||| |||||||||| ||  |        |||||||| ||||  ||||||  |||||| ||||| |||||||| | || || ||    
T  33369150 gttcttccccaattcaaaaaacttcaaacccgaattttttttcttattgaatctgaaagccaaaattcccaaaacttcttgaagcaaaactattgaaatt 33369249  T
Q  255 gaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttg 354  Q
    ||||||||||||||| |  |||||  || | | |||| |  ||||||||||  ||||||||||| ||||||||  ||||||||||||||||||| |||||    
T  33369250 gaatctgaaatgatgggacgtgggaatatgagaaaaaacggttatgaaagttgagctttatcttcaagctccaaatttaatggtgatgtgagagcgcttg 33369349  T
Q  355 aatgttgatgtcc 367  Q
    ||||||| |||||    
T  33369350 aatgttggtgtcc 33369362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 70 - 361
Target Start/End: Original strand, 28432520 - 28432810
Alignment:
Q  70 caaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaat 169  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||||||||||     
T  28432520 caaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttcttccccaaa 28432619  T
Q  170 tcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatg 269  Q
    |||||||  | |||||| || |        |||||||| ||||  |||||||  |||||||  ||||||||||  |||| || |||||||| ||||||||    
T  28432620 tcaaaaaattgcaaaccgtatttttttttaattgaatctgaaaaccaaaatctacaaaattcattcaagcaaatctgttgaaattgaatctaaaatgatg 28432719  T
Q  270 aggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttg 361  Q
     |||||||   || ||||||||  |  ||  ||||||||| || ||||| |  |||||||||||||||||||||||||||||||||||||||    
T  28432720 -ggggtggtcatatgggcaaaaagagctaccaaagtcaagtttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgttg 28432810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 58 - 367
Target Start/End: Complemental strand, 9876361 - 9876053
Alignment:
Q  58 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 157  Q
    ||||||||||| ||| | |||||||||| |||||||||| |||||| || ||||||||||| | |||  | |||||||| | ||||||| ||||||   |    
T  9876361 ctctttcttccccaattgtataaaattgaaaccctaattatacaatctgcaatctacactctataatcacaaaaatttcctccaataataagtggtccag 9876262  T
Q  158 ttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaa 257  Q
    |||| |||||||||||||| ||||||||||||||        | |||||| ||||  |||||||  |||||||| || |||||||| | || || |||||    
T  9876261 ttctgccccaattcaaaaaacttcaaaccctaattttttcgtagtgaatctgaaagccaaaatcctcaaaattttttgaagcaaaactattgaaattgaa 9876162  T
Q  258 tctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaat 357  Q
    |||||||||||| ||||||||  || ||| |||| |  ||||||||||||||||| ||||| | |||||| ||||||||||  ||||||| |||||||||    
T  9876161 tctgaaatgatg-ggggtgggaatatgggaaaaaactgttatgaaagtcaagcttcatcttcaggctccaagtttaatggtattgtgagaatgcttgaat 9876063  T
Q  358 gttgatgtcc 367  Q
    |||| |||||    
T  9876062 gttggtgtcc 9876053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 61 - 191
Target Start/End: Complemental strand, 10269336 - 10269206
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 160  Q
    |||||| | ||||||||||||||||||| |||||||||||||| |  ||||||||| ||||||| ||||||||||||| |||||||||||||||||||||    
T  10269336 tttctttcccaaatatataaaattggaagcctaattttacaatctacaatctacacaccaaaatccccaaaatttcttccaataattagtggtaacgttc 10269237  T
Q  161 ttccccaattcaaaaagcttcaaaccctaat 191  Q
    |||||||||||||||| |||||||| |||||    
T  10269236 ttccccaattcaaaaaacttcaaacgctaat 10269206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 57 - 347
Target Start/End: Original strand, 461467 - 461756
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    |||||||||||||||| | |||||||||| ||||||||||  ||||| |  |||||||||||||||||  |||||||||| | |  |||| ||||||       
T  461467 gctctttcttcctcaattgtataaaattgtaaccctaattacacaatctccaatctacactccaaaatcaccaaaatttcctcctgtaataagtggtcca 461566  T
Q  157 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 256  Q
    |||||||||||||||||||| |||||||||||||         |||||||| |||| ||||||||  |||||||| || || ||||| | || || ||||    
T  461567 gttcttccccaattcaaaaatcttcaaaccctaactttttcgcattgaatctgaaagtcaaaatcctcaaaattt-ttgaaacaaaactattgaaattga 461665  T
Q  257 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgaga 347  Q
    ||||||||||||| || |||||  || ||| | || || ||||||||||| ||||| ||||| |||||||| |||||||||||||||||||    
T  461666 atctgaaatgatggggtgtgggaatatgggaagaaacagttatgaaagtcgagcttcatcttcaagctccaagtttaatggtgatgtgaga 461756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 61 - 347
Target Start/End: Original strand, 33158951 - 33159236
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 160  Q
    |||||||| ||| | |||||||||| ||||||||||  ||||| || |||||||||||||||||  |||||||||| | || |||| ||||||   ||||    
T  33158951 tttcttccccaattgtataaaattgtaaccctaattacacaatctgcaatctacactccaaaatcaccaaaatttcctccagtaataagtggttcggttc 33159050  T
Q  161 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 260  Q
    |||||||||||||||| |||||||||||||         |||||||| |||| ||||||||  |||| ||| || |||||||| | || || ||||||||    
T  33159051 ttccccaattcaaaaatcttcaaaccctaactttttcgcattgaatctgaaagtcaaaatcctcaaatttttttgaagcaaaactattgaaattgaatct 33159150  T
Q  261 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgaga 347  Q
    ||||||||  ||||||||  | | || ||||||| ||||||||||| ||||| ||||| || ||||| |||||||||||||||||||    
T  33159151 gaaatgatagggggtgggaat-atggaaaaagcagttatgaaagtcgagcttcatcttcaaactccaagtttaatggtgatgtgaga 33159236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 61 - 191
Target Start/End: Complemental strand, 9186432 - 9186302
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 160  Q
    |||||||| ||||||| |||||||| ||||||||||||||||| |||||||||||||||||||| ||  ||||||||| |||||||||||| ||||||||    
T  9186432 tttcttccccaaatatttaaaattgaaaccctaattttacaatctgtaatctacactccaaaatcccataaatttcttccaataattagtgataacgttc 9186333  T
Q  161 ttccccaattcaaaaagcttcaaaccctaat 191  Q
    || ||||||||||||| ||| ||||||||||    
T  9186332 ttacccaattcaaaaaactttaaaccctaat 9186302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 58 - 356
Target Start/End: Original strand, 38881691 - 38881992
Alignment:
Q  58 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 157  Q
    ||||||||||| ||||||||||||||||||||| |||||  |||||||| ||| ||||||||||||   || ||||||||| ||||||| ||||||   |    
T  38881691 ctctttcttccccaaatatataaaattggaaccttaattacacaatatgcaatgtacactccaaaaccacccaaatttcttccaataataagtggtccag 38881790  T
Q  158 ttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaa 257  Q
    ||||||||||||||||||| ||| ||||||||||          | | ||  |||  |||||||  ||||||||||| |||||||| | || || |||||    
T  38881791 ttcttccccaattcaaaaaacttgaaaccctaattttttttttcttattctaaaagccaaaatcctcaaaatttcttgaagcaaaactattgaaattgaa 38881890  T
Q  258 tctgaaatgatgagg-ggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatg--tgagagtgcttg 354  Q
    |||||||||||| || |||| |  || ||| |||| |||||||||||||| ||||| ||||| |||||||| |||||| |||||||  ||||||||||||    
T  38881891 tctgaaatgatggggaggtgagaatatgggaaaaaacaattatgaaagtcgagcttcatcttcaagctccaagtttaacggtgatgtatgagagtgcttg 38881990  T
Q  355 aa 356  Q
    ||    
T  38881991 aa 38881992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 61 - 191
Target Start/End: Original strand, 10268093 - 10268223
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 160  Q
    |||||||| |||||||||| |||||||||||||||||| |||| | |||||||||||||||||| ||| ||||||||| ||||||||||| ||||| |||    
T  10268093 tttcttccccaaatatatagaattggaaccctaatttttcaatctataatctacactccaaaatcccccaaatttcttccaataattagtagtaacattc 10268192  T
Q  161 ttccccaattcaaaaagcttcaaaccctaat 191  Q
    |||||||||  ||| | ||||||||||||||    
T  10268193 ttccccaatgtaaataacttcaaaccctaat 10268223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 61 - 291
Target Start/End: Complemental strand, 44620472 - 44620244
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 160  Q
    |||||||| ||||| |||||||||| ||||||||||||||||| | ||||| |||||||||||||| ||||| ||||| |||||||||||||||| ||||    
T  44620472 tttcttccccaaatgtataaaattgaaaccctaattttacaatctttaatccacactccaaaattcacaaaaattcttccaataattagtggtaatgttc 44620373  T
Q  161 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaat-tcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatc 259  Q
    || ||||||| ||| | | ||||||||||||        ||||||| | ||||   |||||| |||||||| |||||| ||||| ||||  | |||||||    
T  44620372 tt-cccaattgaaataacctcaaaccctaat-ttttttgattgaattcaaaataaaaaaatctccaaaattccttcaaacaaaactgttgtaattgaatc 44620275  T
Q  260 tgaaatgatgaggggtgggtgtaagggcaaaa 291  Q
    |||||||||| ||||||||||||  |||||||    
T  44620274 tgaaatgatg-ggggtgggtgtatcggcaaaa 44620244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 57 - 342
Target Start/End: Complemental strand, 1322115 - 1321829
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    ||||| |||||| ||| | |||||||||||||||||||||  ||||| || |||||||| || |||||  || ||||||| | ||||||| ||||||       
T  1322115 gctctgtcttccccaattgtataaaattggaaccctaattacacaatctgcaatctacattctaaaatcacctaaatttcctccaataataagtggttca 1322016  T
Q  157 gttcttccccaattcaaaaagcttcaaaccctaa-tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttg 255  Q
    |||||||||||||||||||| ||| ||||||||| |        |||||||  ||||  |||||||  ||||||||||| |||||||| | || || |||    
T  1322015 gttcttccccaattcaaaaaacttgaaaccctaatttttttcgtattgaatatgaaagccaaaatccacaaaatttcttgaagcaaaactattgaaattg 1321916  T
Q  256 aatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatg 342  Q
    |||||||||||| | ||||||||  || ||| ||||    ||||||||||| ||||| ||||| |||||||| ||||||||||||||    
T  1321915 aatctgaaatgaaggggggtgggaatatgggaaaaaattgttatgaaagtcgagcttcatcttcaagctccaagtttaatggtgatg 1321829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 57 - 189
Target Start/End: Original strand, 10770636 - 10770768
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    |||||||||||| ||||| |||||||||||| ||||||||||||||| |||||||  ||||||||||| |||||||||||||| | |||||| ||  |||    
T  10770636 gctctttcttccccaaatctataaaattggagccctaattttacaatctgtaatccgcactccaaaatccccaaaatttctttaattaattaatgacaac 10770735  T
Q  157 gttcttccccaattcaaaaagcttcaaacccta 189  Q
    ||| |||| |||||| |||| ||||||||||||    
T  10770736 gtttttcctcaattctaaaaacttcaaacccta 10770768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 58 - 163
Target Start/End: Complemental strand, 25373440 - 25373335
Alignment:
Q  58 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 157  Q
    ||||||||||||||||||||| ||||||||||||| ||| | | |||||||||||||||||||||||  |||||||||||| ||||||| ||| |||||     
T  25373440 ctctttcttcctcaaatatatgaaattggaaccctgattgtgctatatgtaatctacactccaaaataaccaaaatttcttccaataataagtagtaaca 25373341  T
Q  158 ttcttc 163  Q
    ||||||    
T  25373340 ttcttc 25373335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 57 - 138
Target Start/End: Original strand, 25705571 - 25705652
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctt 138  Q
    |||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||  ||||||||||||    
T  25705571 gctctttcttccccaaatatataaaattggaaccctaattatactatatgtaatctacactccaaaatcaccaaaatttctt 25705652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 57 - 312
Target Start/End: Original strand, 42895061 - 42895317
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    |||||||||||| ||| | ||||| |||||||||||||||  ||||| || ||| ||||||| |||||  ||||||| |||| |||| || | ||||       
T  42895061 gctctttcttccccaattgtataacattggaaccctaattacacaatctgcaatttacactctaaaatcaccaaaatatcttccaattataaatggtcca 42895160  T
Q  157 gttcttccccaattcaaaaagcttcaaaccctaa-tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttg 255  Q
    |||||||||||||||||||| ||||||||||||| |        |||||||  ||||  |||||||  ||||||||||| |||||||| | || || |||    
T  42895161 gttcttccccaattcaaaaaacttcaaaccctaatttttttcgtattgaatttgaaagccaaaatcctcaaaatttcttgaagcaaaactattgaaattg 42895260  T
Q  256 aatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctt 312  Q
    |||||||||||||| ||||||||  || ||| |||| || | ||||||||| |||||    
T  42895261 aatctgaaatgatggggggtgggaatatgggaaaaaacagtcatgaaagtcgagctt 42895317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 61 - 191
Target Start/End: Original strand, 15684048 - 15684178
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 160  Q
    |||||||| ||||| |||||||||||||||| ||||||||||| ||||||||| | | ||||||||| |||||||||| || |||||  ||  |||||||    
T  15684048 tttcttccccaaatctataaaattggaaccccaattttacaatctgtaatctagagttcaaaattccaaaaatttcttccattaattgatgacaacgttc 15684147  T
Q  161 ttccccaattcaaaaagcttcaaaccctaat 191  Q
    ||||||||||| ||||  |||||| ||||||    
T  15684148 ttccccaattctaaaaatttcaaaacctaat 15684178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 58 - 164
Target Start/End: Complemental strand, 25402610 - 25402504
Alignment:
Q  58 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 157  Q
    ||||||||||| |||||||||||||||| |||||| ||| ||| || ||||||||||||||||||||  |||||||||||| ||||||| ||| |||||     
T  25402610 ctctttcttccccaaatatataaaattgaaaccctgattgtactatctgtaatctacactccaaaataaccaaaatttcttccaataataagtagtaaca 25402511  T
Q  158 ttcttcc 164  Q
    |||||||    
T  25402510 ttcttcc 25402504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 58 - 164
Target Start/End: Complemental strand, 25707119 - 25707013
Alignment:
Q  58 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 157  Q
    ||||||||||| |||||||||||||||| |||||| ||| ||| || ||||||||||||||||||||  |||||||||||| ||||||| ||| |||||     
T  25707119 ctctttcttccccaaatatataaaattgaaaccctgattgtactatctgtaatctacactccaaaataaccaaaatttcttccaataataagtagtaaca 25707020  T
Q  158 ttcttcc 164  Q
    |||||||    
T  25707019 ttcttcc 25707013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 86 - 191
Target Start/End: Original strand, 12515395 - 12515499
Alignment:
Q  86 gaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagcttcaaac 185  Q
    ||||| |||||||||||| | |||||||||||||||||| ||||||||||| |||  ||||||| | |||||||||||||| ||||||||| ||||||||    
T  12515395 gaaccgtaattttacaatctttaatctacactccaaaatccccaaaatttc-ttccctaattagcgataacgttcttccccgattcaaaaaacttcaaac 12515493  T
Q  186 cctaat 191  Q
    ||||||    
T  12515494 cctaat 12515499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 57 - 176
Target Start/End: Original strand, 11719746 - 11719865
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    |||||||||||| ||||| |||||||||||||||| ||||||||||| | | | ||| | |||||||| ||||||||||||| || |||||  ||  |||    
T  11719746 gctctttcttccccaaatctataaaattggaaccccaattttacaatttatcacctagagtccaaaatccccaaaatttcttccattaattgatgacaac 11719845  T
Q  157 gttcttccccaattcaaaaa 176  Q
    ||||||||||||||||||||    
T  11719846 gttcttccccaattcaaaaa 11719865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 57 - 124
Target Start/End: Original strand, 25370798 - 25370865
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaat 124  Q
    |||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  25370798 gctctttcttccccaaatatataaaattggaaccctaattatactatatgtaatctacactccaaaat 25370865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 224 - 367
Target Start/End: Original strand, 33748793 - 33748935
Alignment:
Q  224 caaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagc 323  Q
    ||||||||||| |||||||| | || || ||||||||||||||||| ||||||||  || ||  |||| |  |||||||||||||| || ||||| ||||    
T  33748793 caaaatttcttgaagcaaaactattgaaattgaatctgaaatgatgtggggtgggaatatggaaaaaa-cggttatgaaagtcaagtttcatcttcaagc 33748891  T
Q  324 tccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 367  Q
    |||| ||||||| ||| ||||||||||||||||||||| |||||    
T  33748892 tccaagtttaatagtgttgtgagagtgcttgaatgttggtgtcc 33748935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 58 - 191
Target Start/End: Original strand, 17807313 - 17807446
Alignment:
Q  58 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 157  Q
    ||||||||||| |||||||||||| ||||||||||||||||| ||| ||| | ||| | | |||||| ||||||| ||||| || |||||  ||  |||     
T  17807313 ctctttcttccacaaatatataaatttggaaccctaattttataatttgtcacctagagttcaaaatccccaaaaattcttccattaattgatgacaaca 17807412  T
Q  158 ttcttccccaattcaaaaagcttcaaaccctaat 191  Q
    ||||||||||||||||||| ||||||| ||||||    
T  17807413 ttcttccccaattcaaaaaacttcaaaacctaat 17807446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 57 - 367
Target Start/End: Complemental strand, 31823276 - 31822975
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    |||||||||||| ||| | |||||||||||||||||||||  ||||| || ||||||||||| | |||    |||||||| |  |||||||||||||       
T  31823276 gctctttcttccccaattgtataaaattggaaccctaattacacaatctgcaatctacactctataatcatgaaaatttcctcaaataattagtggttca 31823177  T
Q  157 gttcttccccaattcaaaaagcttcaaaccctaa--tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaattt 254  Q
    ||||| |||||||||||||| |||||||||||||  |        | ||||||  |||  |||||||  ||||||||||| |||||||| | || || ||    
T  31823176 gttctgccccaattcaaaaaacttcaaaccctaattttttttcgtagtgaatctaaaagccaaaatcctcaaaatttcttgaagcaaaactattgaa-tt 31823078  T
Q  255 gaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttg 354  Q
    ||||||||||||||| ||||||||  || ||| |||| |  ||||||||          ||||| || ||||| ||||||||||| ||||||||||||||    
T  31823077 gaatctgaaatgatgtggggtgggaatatgggaaaaaacggttatgaaa----------atcttcaaactccaagtttaatggtgttgtgagagtgcttg 31822988  T
Q  355 aatgttgatgtcc 367  Q
    ||||||| |||||    
T  31822987 aatgttggtgtcc 31822975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 60 - 191
Target Start/End: Complemental strand, 11790627 - 11790496
Alignment:
Q  60 ctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgtt 159  Q
    ||||||||||||||| ||||||| ||||||| | |||||||||| ||| ||||| | |||||||| ||||||||||||| || |||||  ||  ||| ||    
T  11790627 ctttcttcctcaaatctataaaaatggaaccttgattttacaatttgttatctatagtccaaaatccccaaaatttcttccattaattgatgacaacctt 11790528  T
Q  160 cttccccaattcaaaaagcttcaaaccctaat 191  Q
    |||||| ||||| |||| ||||||| ||||||    
T  11790527 cttcccaaattctaaaaacttcaaaacctaat 11790496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 57 - 191
Target Start/End: Complemental strand, 32824072 - 32823938
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    |||||||||||| ||| | | |||||||||||||||||||  ||||| || ||||||||||  |||||  || ||||||| | ||||||| ||||||       
T  32824072 gctctttcttccccaattgtttaaaattggaaccctaattacacaatctgcaatctacactataaaatcgcctaaatttcctccaataataagtggttca 32823973  T
Q  157 gttcttccccaattcaaaaagcttcaaaccctaat 191  Q
    ||| |||||||||||||||| ||||||||||||||    
T  32823972 gtttttccccaattcaaaaaacttcaaaccctaat 32823938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 200 - 345
Target Start/End: Complemental strand, 25371781 - 25371636
Alignment:
Q  200 attgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattat 299  Q
    |||||||| ||||| |||||||   ||||||| ||  ||||||| | || || ||||||| ||||||||||||||||||  || ||| |||| || ||||    
T  25371781 attgaatctgaaatccaaaatccaaaaaatttattgcagcaaaactattgaaattgaatccgaaatgatgaggggtgggcatatgggaaaaaacagttat 25371682  T
Q  300 gaaagtcaagctttatctttaagctccatgtttaatggtgatgtga 345  Q
    ||| ||| ||||| ||||| |||||||| |||||||||||||||||    
T  25371681 gaatgtcgagcttcatcttcaagctccaagtttaatggtgatgtga 25371636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 6 - 81
Target Start/End: Complemental strand, 9186522 - 9186447
Alignment:
Q  6 agtgaccaaaatttccaaggatcaaattaattgatttgtagaaaatgctttgctctttcttcctcaaatatataaa 81  Q
    |||||||||||||||||| ||  ||||| ||||||||| ||||||||  |||||||||||||| ||||||||||||    
T  9186522 agtgaccaaaatttccaatgactaaattgattgatttgcagaaaatgacttgctctttcttccccaaatatataaa 9186447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 57 - 176
Target Start/End: Original strand, 24527184 - 24527303
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    ||||| |||||| ||| | |||||||||||||||||||||  ||||| || |||||||| || |||||  || ||||||| | ||||||| ||||||       
T  24527184 gctctatcttccccaattgtataaaattggaaccctaattacacaatctgcaatctacattctaaaatcacctaaatttcctccaataataagtggtcca 24527283  T
Q  157 gttcttccccaattcaaaaa 176  Q
    ||||||||||||||||||||    
T  24527284 gttcttccccaattcaaaaa 24527303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 175
Target Start/End: Original strand, 37525149 - 37525267
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    ||||||| |||| ||| | |||||||||| ||||||||||  ||||| |  |||||||||||||||||  |||||||||| | || |||| ||||||       
T  37525149 gctctttattccccaattgtataaaattgtaaccctaattgcacaatcttcaatctacactccaaaatcaccaaaatttcctccactaataagtggttca 37525248  T
Q  157 gttcttccccaattcaaaa 175  Q
    |||||||||||||||||||    
T  37525249 gttcttccccaattcaaaa 37525267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 191
Target Start/End: Original strand, 41041032 - 41041166
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    |||||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  ||     
T  41041032 gctctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatgtcaat 41041131  T
Q  157 gttcttccccaattcaaaaagcttcaaaccctaat 191  Q
    |||||||||||||||||| | ||| ||||||||||    
T  41041132 gttcttccccaattcaaataacttaaaaccctaat 41041166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 58 - 191
Target Start/End: Original strand, 13484831 - 13484964
Alignment:
Q  58 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 157  Q
    ||||||||||| |||||||||||| |||||||| |||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  || |    
T  13484831 ctctttcttccccaaatatataaatttggaaccttaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatgtcaatg 13484930  T
Q  158 ttcttccccaattcaaaaagcttcaaaccctaat 191  Q
    ||||||||||||||||||| ||| ||||||||||    
T  13484931 ttcttccccaattcaaaaaacttaaaaccctaat 13484964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 262 - 347
Target Start/End: Original strand, 37525333 - 37525418
Alignment:
Q  262 aaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgaga 347  Q
    |||||||| ||||||||  || ||| |||| || ||||||||||| ||||| ||||| |||||||| |||||||||||||||||||    
T  37525333 aaatgatggggggtgggaatatgggaaaaaacagttatgaaagtcgagcttcatcttcaagctccaagtttaatggtgatgtgaga 37525418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 269
Target Start/End: Complemental strand, 8655752 - 8655640
Alignment:
Q  157 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 256  Q
    |||||||||||||||||||| ||| ||||||||||        |||||||| ||||  |||||||  ||||||||||| |||||||| | || || ||||    
T  8655752 gttcttccccaattcaaaaaacttgaaaccctaattttttcgtattgaatctgaaagccaaaatccacaaaatttcttgaagcaaaactattgaaattga 8655653  T
Q  257 atctgaaatgatg 269  Q
    |||||||||||||    
T  8655652 atctgaaatgatg 8655640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 191
Target Start/End: Original strand, 41824261 - 41824394
Alignment:
Q  58 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 157  Q
    ||||||||||| |||||||||| | ||| ||||||||| ||| ||| ||| |  || | | |||||| ||||||||||||| ||  ||||  ||  || |    
T  41824261 ctctttcttccccaaatatatatatttgaaaccctaatgttataatttgtcacgtagagttcaaaatccccaaaatttcttccatgaattgatgtcaaag 41824360  T
Q  158 ttcttccccaattcaaaaagcttcaaaccctaat 191  Q
    ||||||||||||||||||| ||| ||||||||||    
T  41824361 ttcttccccaattcaaaaaacttaaaaccctaat 41824394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 63 - 191
Target Start/End: Original strand, 31199781 - 31199909
Alignment:
Q  63 tcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttctt 162  Q
    |||||| ||| | |||||||||||||||||||||  ||||| | ||||||||| || || ||  || ||||||| | ||||||| ||||||   ||||||    
T  31199781 tcttccccaattgtataaaattggaaccctaattacacaatctataatctacattctaatatcacctaaatttcctccaataataagtggtccagttctt 31199880  T
Q  163 ccccaattcaaaaagcttcaaaccctaat 191  Q
    || |||||||| || ||| ||||||||||    
T  31199881 cctcaattcaacaaacttaaaaccctaat 31199909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 191
Target Start/End: Original strand, 33748644 - 33748759
Alignment:
Q  76 tataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaa 175  Q
    ||||||||||||||| |||||  ||||| || ||||||||||| | |||    |||||||| | ||||||| ||||||   ||||| |||||||||||||    
T  33748644 tataaaattggaaccttaattacacaatctgcaatctacactctataatcatgaaaatttcctccaataataagtggttcagttctgccccaattcaaaa 33748743  T
Q  176 agcttcaaaccctaat 191  Q
    |  |||||||||||||    
T  33748744 aaattcaaaccctaat 33748759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 314 - 367
Target Start/End: Original strand, 11719994 - 11720047
Alignment:
Q  314 atctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 367  Q
    ||||| |||||| ||| ||||||||||||||||||| ||||||||||| |||||    
T  11719994 atcttcaagctctatgcttaatggtgatgtgagagtacttgaatgttggtgtcc 11720047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 58 - 191
Target Start/End: Complemental strand, 22273668 - 22273535
Alignment:
Q  58 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 157  Q
    ||||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||| | | ||||||  || ||||||||| ||  ||||  ||  || |    
T  22273668 ctctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatctcccaaatttcttccatgaattgatgtcaatg 22273569  T
Q  158 ttcttccccaattcaaaaagcttcaaaccctaat 191  Q
    |||||||||||||||| || ||| ||| ||||||    
T  22273568 ttcttccccaattcaagaaacttaaaatcctaat 22273535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 191
Target Start/End: Complemental strand, 29694095 - 29693963
Alignment:
Q  59 tctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgt 158  Q
    |||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||| | | |||||| | ||| ||||||| ||  ||||  ||  || ||    
T  29694095 tctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatccgcaagatttcttccatgaattgatgacaaagt 29693996  T
Q  159 tcttccccaattcaaaaagcttcaaaccctaat 191  Q
    ||||| |||||| ||||| ||| ||||||||||    
T  29693995 tcttctccaatttaaaaaacttaaaaccctaat 29693963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 295 - 342
Target Start/End: Complemental strand, 32823863 - 32823816
Alignment:
Q  295 attatgaaagtcaagctttatctttaagctccatgtttaatggtgatg 342  Q
    |||||||||||| ||||||||||| ||||| || ||||||||||||||    
T  32823863 attatgaaagtcgagctttatcttcaagcttcaagtttaatggtgatg 32823816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 314 - 367
Target Start/End: Complemental strand, 11790370 - 11790317
Alignment:
Q  314 atctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 367  Q
    ||||| |||||| || || ||||||||||||||||| ||||||||||| |||||    
T  11790370 atcttcaagctctatcttgaatggtgatgtgagagtacttgaatgttggtgtcc 11790317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 361
Target Start/End: Original strand, 42895321 - 42895353
Alignment:
Q  329 gtttaatggtgatgtgagagtgcttgaatgttg 361  Q
    ||||||||||| |||||||||||||||||||||    
T  42895321 gtttaatggtgttgtgagagtgcttgaatgttg 42895353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 124; Significance: 1e-63; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 61 - 361
Target Start/End: Complemental strand, 39922806 - 39922506
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 160  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  39922806 tttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttc 39922707  T
Q  161 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 260  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||||| |||| || ||||||||    
T  39922706 ttccccaaatcaaaaaattacaaaccctaattttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatct 39922607  T
Q  261 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 360  Q
     |||||||| | |||||   || ||||||||| |  ||| |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||    
T  39922606 aaaatgatgggaggtggtcatatgggcaaaaggagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 39922507  T
Q  361 g 361  Q
    |    
T  39922506 g 39922506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 61 - 361
Target Start/End: Complemental strand, 39084951 - 39084651
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 160  Q
    |||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  39084951 tttcttccccaaatatataaaattggaactctaattttacaatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttc 39084852  T
Q  161 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 260  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||||| |||| || ||||||||    
T  39084851 ttccccaaatcaaaaaattacaaaccctaattttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatct 39084752  T
Q  261 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 360  Q
     |||||||| | |||||   || ||||||||  |  ||| |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||    
T  39084751 aaaatgatgggaggtggtcatatgggcaaaaagagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 39084652  T
Q  361 g 361  Q
    |    
T  39084651 g 39084651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 61 - 361
Target Start/End: Complemental strand, 39190618 - 39190318
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 160  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  39190618 tttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttc 39190519  T
Q  161 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 260  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||||| | || || ||||||||    
T  39190518 ttccccaaatcaaaaaattgcaaaccctaattttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactattgaaattgaatct 39190419  T
Q  261 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 360  Q
     |||||||| | |||||   || ||||||||  |  ||| |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||    
T  39190418 aaaatgatgggaggtggtcatatgggcaaaaagagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 39190319  T
Q  361 g 361  Q
    |    
T  39190318 g 39190318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 61 - 361
Target Start/End: Original strand, 42879576 - 42879876
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 160  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  42879576 tttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttc 42879675  T
Q  161 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 260  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||||| |||| || ||||||||    
T  42879676 ttccccaaatcaaaaaattgcaaaccctaattttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatct 42879775  T
Q  261 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 360  Q
     |||||||| | |||||   || ||||||||  |  ||| |||||||||||| ||||| |  |||||||||||||||||||||||||||| |||||||||    
T  42879776 aaaatgatgggaggtggtcatatgggcaaaaagagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgattgaatgtt 42879875  T
Q  361 g 361  Q
    |    
T  42879876 g 42879876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 61 - 361
Target Start/End: Original strand, 43778681 - 43778979
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 160  Q
    |||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  43778681 tttcttcgccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttc 43778780  T
Q  161 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 260  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||||| |||| || ||||||||    
T  43778781 ttccccaa-tcaaaaaattgcaaaccctaat-ttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatct 43778878  T
Q  261 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 360  Q
     |||||||| | |||||   || ||||||||| |  ||| |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||    
T  43778879 aaaatgatgggaggtggtcatatgggcaaaaggagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 43778978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 61 - 361
Target Start/End: Complemental strand, 5485851 - 5485551
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 160  Q
    |||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  5485851 tttcttccccaaatatataaaattggaaccctaattttaccatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttc 5485752  T
Q  161 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 260  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||||| |||| || ||||||||    
T  5485751 ttccccaaatcaaaaaattacaaaccctaattttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaaatgttgaaattgaatct 5485652  T
Q  261 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 360  Q
     |||||||| | || ||   || ||||||||  |  ||| ||||||||||||  |||| |  ||||||||||||||||||||||||||||||||||||||    
T  5485651 aaaatgatgggaggcggtcatatgggcaaaaagagctatcaaagtcaagcttcgtcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 5485552  T
Q  361 g 361  Q
    |    
T  5485551 g 5485551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 61 - 360
Target Start/End: Original strand, 44993100 - 44993399
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 160  Q
    |||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||   |||| |||||| |||||||||  ||| ||||||    
T  44993100 tttcttccccaaatatataaaattggaatcctaattttacaatgtgtaatctacactccaaaatcttcaaattttcttccaataattaagggtcacgttc 44993199  T
Q  161 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 260  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||||| |||| || ||||||||    
T  44993200 ttccccaaatcaaaaaattgcaaaccctaattttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatct 44993299  T
Q  261 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 360  Q
     |||||||| | |||||   || ||||||||  |  ||| ||||||||| || ||||| |  ||||||||||||||||||||||| ||||||||||||||    
T  44993300 aaaatgatgggaggtggtcatatgggcaaaaagagctatcaaagtcaagtttcatcttcatcctccatgtttaatggtgatgtgaaagtgcttgaatgtt 44993399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 62 - 191
Target Start/End: Original strand, 13438146 - 13438275
Alignment:
Q  62 ttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttct 161  Q
    ||||||| |||||||||||||| | ||||||||||||||||| | |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  13438146 ttcttccccaaatatataaaatagaaaccctaattttacaatctttaatgtacactccaaaattcccaaaatttcttccaataattagtggtaactttct 13438245  T
Q  162 tccccaattcaaaaagcttcaaaccctaat 191  Q
    ||||||||||||||| ||||||||||||||    
T  13438246 tccccaattcaaaaaacttcaaaccctaat 13438275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 61 - 361
Target Start/End: Complemental strand, 32653430 - 32653130
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 160  Q
    ||||||||  ||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  ||| | ||||    
T  32653430 tttcttcccaaaatatataaaattgaaactctaattttacaatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcatgttc 32653331  T
Q  161 ttccccaattcaaaaagcttcaaaccctaa-tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatc 259  Q
    |||||||| |||||||  | |||||||||| |        |||||||  ||||  |||||||  |||||||  ||||||||||| |||| || |||||||    
T  32653330 ttccccaaatcaaaaaattacaaaccctaatttttttttaattgaatatgaaaaccaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatc 32653231  T
Q  260 tgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgt 359  Q
    | |||||| | |||||||   || ||||||||  |  ||| |||||||||||| ||||| |  || ||||||||||||||||||||||||||| ||||||    
T  32653230 taaaatgaag-ggggtggtcatatgggcaaaaagagctatcaaagtcaagcttcatcttcatccttcatgtttaatggtgatgtgagagtgctcgaatgt 32653132  T
Q  360 tg 361  Q
    ||    
T  32653131 tg 32653130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 72 - 257
Target Start/End: Complemental strand, 25994897 - 25994708
Alignment:
Q  72 aatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattc 171  Q
    |||||||||||||||||| |||| |||||||| |||||||||||||||||||| | ||||||||||| ||||||||||||||||| ||||||| ||||||    
T  25994897 aatatataaaattggaactctaaatttacaatctgtaatctacactccaaaatcctcaaaatttcttccaataattagtggtaacattcttcctcaattc 25994798  T
Q  172 aaaaagcttcaaaccctaa----tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaa 257  Q
    ||||| || |||||||| |    |        |||||||||||||  || |||| ||||||||||||||||||||| ||||||| |||||    
T  25994797 aaaaaactccaaaccctgatttttttttttttattgaatccgaaaaccagaatccccaaaatttcttcaagcaaaactgttcaaattgaa 25994708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 61 - 191
Target Start/End: Original strand, 230740 - 230869
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 160  Q
    |||||||  ||||||||||||||||| | |||||||||||||| |||||||||||||||||| | ||||||||||||| |||||||||||||||||||||    
T  230740 tttcttctccaaatatataaaattggcatcctaattttacaatctgtaatctacactccaaagtccccaaaatttcttccaataattagtggtaacgttc 230839  T
Q  161 ttccccaattcaaaaagcttcaaaccctaat 191  Q
    || || ||||||||||  |||||||||||||    
T  230840 tt-cctaattcaaaaaatttcaaaccctaat 230869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 57 - 367
Target Start/End: Complemental strand, 4520270 - 4519959
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    |||||||||||  ||| |||||||||||||||||||||||  | ||| || ||||||||||| |||||  |||||||||| |   ||||| ||||||       
T  4520270 gctctttcttcgccaattatataaaattggaaccctaattacaaaatttgcaatctacactctaaaatcaccaaaatttcctctgataataagtggttca 4520171  T
Q  157 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnn--attgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaattt 254  Q
    ||||||| |||||||||||| ||| ||||||||||          |||||||| ||||  |||||||  ||||||||||| |||||||| | || ||  |    
T  4520170 gttcttctccaattcaaaaaacttgaaaccctaatttttttttgtattgaatctgaaagccaaaatcctcaaaatttcttgaagcaaaactattgaaaat 4520071  T
Q  255 gaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttg 354  Q
    |||| |||||||||| |||||||   || ||| |||| || ||||||||||| ||||| ||||| |||||||| ||||||||||||||| | ||||||||    
T  4520070 gaatatgaaatgatg-ggggtggaaatatgggaaaaaacagttatgaaagtcgagcttcatcttcaagctccaagtttaatggtgatgtcaaagtgcttg 4519972  T
Q  355 aatgttgatgtcc 367  Q
    ||||||| |||||    
T  4519971 aatgttggtgtcc 4519959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 76 - 342
Target Start/End: Original strand, 44556917 - 44557183
Alignment:
Q  76 tataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaa 175  Q
    |||||||||||||  ||||||  ||||| || ||||||||||| |||||  || ||||||| | ||||||| ||||||   |||||||||||||||||||    
T  44556917 tataaaattggaattctaattacacaatctgcaatctacactctaaaatcacctaaatttcctccaataataagtggtccagttcttccccaattcaaaa 44557016  T
Q  176 agcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggt 275  Q
    | ||||||||||||||        ||||||||  |||  |||||||  ||||| ||||| |||||||| | || || |  ||||  ||||||||||||||    
T  44557017 aacttcaaaccctaattttttcgtattgaatcttaaaaccaaaatcctcaaaaattcttgaagcaaaactattgaaataaaatccaaaatgatgaggggt 44557116  T
Q  276 gggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatg 342  Q
    |||  || ||| |||| |  ||||||||||| ||||| |||||  ||||||| ||||||||||||||    
T  44557117 gggaatatgggaaaaaactgttatgaaagtcgagcttcatcttctagctccaagtttaatggtgatg 44557183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 39294625 - 39294553
Alignment:
Q  118 ccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagcttcaaaccctaa 190  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  39294625 ccaaaatccccaaaatttcttccaataattagtggtaacgttcttccccaattcaaaaaacttcaaaccctaa 39294553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 57 - 341
Target Start/End: Complemental strand, 27626530 - 27626246
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    |||||||||||| ||| | |||||||||||||||||||||  ||||| |  ||||||||||| |||||     ||||||| | ||||||| ||||||       
T  27626530 gctctttcttccccaattgtataaaattggaaccctaattacacaatctacaatctacactctaaaatcatttaaatttcctccaataataagtggtcca 27626431  T
Q  157 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 256  Q
     ||||||||||||||||||| ||||||||||||||        ||||||||  |||  |||||||  ||||||||||| |||||||| | || || |  |    
T  27626430 attcttccccaattcaaaaaacttcaaaccctaattttttcgtattgaatcttaaaaccaaaatcctcaaaatttcttgaagcaaaactattgaaataaa 27626331  T
Q  257 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgat 341  Q
    |||  |||||||| ||||||||  || ||  |||| |  ||||||||||| ||||| ||||| |||||||| |||||||||||||    
T  27626330 atccaaaatgatggggggtgggaatatggcaaaaaactgttatgaaagtcgagcttcatcttcaagctccaagtttaatggtgat 27626246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 58 - 347
Target Start/End: Original strand, 51041027 - 51041314
Alignment:
Q  58 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 157  Q
    ||||||||||| ||| | |||||||||| ||||||||||  ||||| || |||||||| ||||||||  |||  ||||| | |  |||| ||||||   |    
T  51041027 ctctttcttccccaattgtataaaattgtaaccctaattacacaatctgcaatctacattccaaaatcaccatgatttcctccggtaataagtggttcgg 51041126  T
Q  158 ttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaa 257  Q
    ||||||||| ||||| ||| |||||||||||||         |||||||| |||| ||||||||  |||||    || |||||||| | || || |||||    
T  51041127 ttcttcccctattcataaatcttcaaaccctaactttttcgcattgaatctgaaagtcaaaatcctcaaaaaaatttgaagcaaaactattgaaattgaa 51041226  T
Q  258 tctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgaga 347  Q
    | ||||||||||  |||||||  || ||| |||| || ||||||||||| || || ||||| |||||||| |||||||||||||||||||    
T  51041227 tatgaaatgatg--gggtgggaatatgggaaaaaacagttatgaaagtcgagtttcatcttcaagctccaagtttaatggtgatgtgaga 51041314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 171
Target Start/End: Original strand, 28100865 - 28100977
Alignment:
Q  59 tctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgt 158  Q
    |||||||||| ||||| |||||||||| ||| |||||| |||||| | ||||||| | |||||||||||||||||||||| || |||||  ||  |||||    
T  28100865 tctttcttccccaaatctataaaattgaaactctaattgtacaatttataatctagagtccaaaattcccaaaatttcttccattaattgatgacaacgt 28100964  T
Q  159 tcttccccaattc 171  Q
    |||||||||||||    
T  28100965 tcttccccaattc 28100977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 59 - 191
Target Start/End: Complemental strand, 13450107 - 13449984
Alignment:
Q  59 tctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgt 158  Q
    |||||||||  ||||| |||||||||| ||||||||||||||||| | |||| ||||||||||||||         |||| ||||||||| |  |||| |    
T  13450107 tctttcttcaccaaatgtataaaattgaaaccctaattttacaatctttaatgtacactccaaaatt---------tcttccaataattatttttaacat 13450017  T
Q  159 tcttccccaattcaaaaagcttcaaaccctaat 191  Q
    |||||||||||||||||| ||||||||||||||    
T  13450016 tcttccccaattcaaaaaacttcaaaccctaat 13449984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 57 - 191
Target Start/End: Original strand, 2691684 - 2691818
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    |||||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||| | | ||||||  |||||||||||| || |||||  ||  ||     
T  2691684 gctctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatctccaaaatttcttccattaattgatgacaaa 2691783  T
Q  157 gttcttccccaattcaaaaagcttcaaaccctaat 191  Q
     ||||||||||||||||||| ||| ||||||||||    
T  2691784 attcttccccaattcaaaaaacttaaaaccctaat 2691818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 58 - 191
Target Start/End: Original strand, 20820290 - 20820423
Alignment:
Q  58 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 157  Q
    ||||||||| |||||||||||||| ||||||||||||||||| ||| ||| | ||| | |  ||||| ||||||||||||| || |||||  ||  || |    
T  20820290 ctctttctttctcaaatatataaatttggaaccctaattttataatttgtcacctaaagtttaaaatccccaaaatttcttccactaattgatgacaaag 20820389  T
Q  158 ttcttccccaattcaaaaagcttcaaaccctaat 191  Q
    |||||| |||||||||||| ||| ||| ||||||    
T  20820390 ttcttctccaattcaaaaaacttaaaaacctaat 20820423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 335
Target Start/End: Complemental strand, 35997568 - 35997284
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    ||||| |||||| ||| | |||||||||||||||||||||  ||||| || |||||||| || || ||  || ||||||| | ||||||| ||||||       
T  35997568 gctctgtcttccccaattgtataaaattggaaccctaattacacaatctgcaatctacattctaatataacctaaatttcctccaataataagtggtcca 35997469  T
Q  157 gttc------ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttca 250  Q
    ||||      |||||||||| ||||| ||| |||||||||         |||||||| ||||  |||||||  ||||||||||| |||||||| | || |    
T  35997468 gttccagttcttccccaatttaaaaaacttgaaaccctaaatttttcgtattgaatctgaaagccaaaatccacaaaatttcttgaagcaaaactattga 35997369  T
Q  251 atttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaat 335  Q
    | ||||||||||||||||| ||||||||  || ||| |||| |  ||| ||||||| ||||| ||||| ||||| || |||||||    
T  35997368 aattgaatctgaaatgatggggggtgggaatatgggaaaaaactgttaagaaagtcgagcttcatcttcaagctgcaagtttaat 35997284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 84
Target Start/End: Complemental strand, 39294721 - 39294645
Alignment:
Q  8 tgaccaaaatttccaaggatcaaattaattgatttgtagaaaatgctttgctctttcttcctcaaatatataaaatt 84  Q
    |||||||||||||||| |   ||||| ||||||||| |||||||||||| ||||||||||| |||||||||||||||    
T  39294721 tgaccaaaatttccaaaggctaaattgattgatttgcagaaaatgcttttctctttcttccccaaatatataaaatt 39294645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 63 - 191
Target Start/End: Complemental strand, 47942541 - 47942413
Alignment:
Q  63 tcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttctt 162  Q
    |||||| ||| | |||||||||||||||||||||  ||||| | ||||||||| || || ||  || ||||||| | ||||||| ||||||   ||||||    
T  47942541 tcttccccaattgtataaaattggaaccctaattacacaatctataatctacattctaatatcacctaaatttcctccaataataagtggtccagttctt 47942442  T
Q  163 ccccaattcaaaaagcttcaaaccctaat 191  Q
    |||||||||||||| ||| ||||||||||    
T  47942441 ccccaattcaaaaaacttaaaaccctaat 47942413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 58 - 191
Target Start/End: Complemental strand, 54387670 - 54387537
Alignment:
Q  58 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 157  Q
    |||||||| ||  ||||||||||| ||||||||||||| ||||||| ||| | ||| | | |||||| | ||||||||||| ||  ||||  ||  || |    
T  54387670 ctctttctgccctaaatatataaatttggaaccctaatgttacaatttgtcacctagagttcaaaatcctcaaaatttcttccatgaattgatgccaaag 54387571  T
Q  158 ttcttccccaattcaaaaagcttcaaaccctaat 191  Q
    ||||||||||||||||||| ||| ||||||||||    
T  54387570 ttcttccccaattcaaaaaacttaaaaccctaat 54387537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 360
Target Start/End: Complemental strand, 10544605 - 10544498
Alignment:
Q  253 ttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgct 352  Q
    |||||| |||||||||| | |||||| ||| |||||||| || || | |||||| | ||| ||||| |||||| ||||||||||||||||| ||| || |    
T  10544605 ttgaatatgaaatgatgggtggtgggcgtatgggcaaaaacagttctcaaagtcgaacttcatcttcaagctctatgtttaatggtgatgtcagaatgtt 10544506  T
Q  353 tgaatgtt 360  Q
    ||||||||    
T  10544505 tgaatgtt 10544498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 191
Target Start/End: Original strand, 44793243 - 44793358
Alignment:
Q  76 tataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaa 175  Q
    |||||||||||||||||||||  ||||| | ||||||||| || || ||  |  ||||||| | ||||||| ||||||   |||||||||||||||||||    
T  44793243 tataaaattggaaccctaattacacaatctataatctacattctaatatcacataaatttcctccaataataagtggtccagttcttccccaattcaaaa 44793342  T
Q  176 agcttcaaaccctaat 191  Q
    | ||| ||||||||||    
T  44793343 aacttaaaaccctaat 44793358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 57 - 191
Target Start/End: Original strand, 11254378 - 11254512
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    |||||||||||| |||||||||||| ||| ||||||||| ||| ||| ||| | ||| | | |||||| ||| ||| ||||| || |||||  ||  ||     
T  11254378 gctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaaattcttccattaattgatgtcaat 11254477  T
Q  157 gttcttccccaattcaaaaagcttcaaaccctaat 191  Q
    |||||||||||||||||||| ||  ||||||||||    
T  11254478 gttcttccccaattcaaaaaactcaaaaccctaat 11254512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 148
Target Start/End: Complemental strand, 10544778 - 10544693
Alignment:
Q  63 tcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataatta 148  Q
    |||||| ||||| ||||||||||||||||||||||| ||||   |  |||||| |||||||| ||||||||||||| || ||||||    
T  10544778 tcttccccaaatctataaaattggaaccctaatttttcaatccctcgtctacagtccaaaatccccaaaatttcttccattaatta 10544693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 138
Target Start/End: Complemental strand, 26397715 - 26397635
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctt 138  Q
    |||||||||||||||||| ||||||||| ||||||||| |||| ||| ||| ||||| | | |||||| |||||||||||||    
T  26397715 gctctttcttcctcaaatctataaaattagaaccctaa-tttataatttgtcatctagagttcaaaatccccaaaatttctt 26397635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 191
Target Start/End: Complemental strand, 49524527 - 49524394
Alignment:
Q  58 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 157  Q
    ||||||||||| ||| |||||||| ||||||||||||| ||| ||| ||| | ||  | | |||||| ||| ||||||||| ||  ||||  ||  || |    
T  49524527 ctctttcttccccaagtatataaatttggaaccctaatgttataatttgtcacctggagttcaaaatcccccaaatttcttacatgaattgatgtcaatg 49524428  T
Q  158 ttcttccccaattcaaaaagcttcaaaccctaat 191  Q
    ||||||||||||||||||| ||| ||||||||||    
T  49524427 ttcttccccaattcaaaaaacttaaaaccctaat 49524394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 191
Target Start/End: Original strand, 35402069 - 35402202
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    |||||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||| | | | |||| ||| ||||||||| ||  ||||  ||  ||     
T  35402069 gctctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacctagagttc-aaatcccccaaatttcttccatgaattgatgtcaat 35402167  T
Q  157 gttcttccccaattcaaaaagcttcaaaccctaat 191  Q
    |||||||||||||| ||||| ||| ||||||||||    
T  35402168 gttcttccccaattaaaaaaacttaaaaccctaat 35402202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 367
Target Start/End: Complemental strand, 27385980 - 27385940
Alignment:
Q  327 atgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 367  Q
    ||||||||||||||||||||||| ||||||||||| |||||    
T  27385980 atgtttaatggtgatgtgagagtacttgaatgttggtgtcc 27385940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 84
Target Start/End: Original strand, 230650 - 230728
Alignment:
Q  6 agtgaccaaaatttccaaggatcaaattaattgatttgtagaaaatgctttgctctttcttcctcaaatatataaaatt 84  Q
    |||||||| ||||||||||||  || ||   |||||||  |||||||||||||| |||||||| ||| |||||||||||    
T  230650 agtgaccataatttccaaggactaatttggctgatttgctgaaaatgctttgctttttcttccccaattatataaaatt 230728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 367
Target Start/End: Original strand, 28101018 - 28101179
Alignment:
Q  206 tccgaaattcaaaa-tcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaag 304  Q
    |||||||| ||||| || |||||||||||||||||     ||||||  ||||||||||||||||| | |||||   ||  |||||||  | |||| ||||    
T  28101018 tccgaaatccaaaaatctccaaaatttcttcaagctttggtgttcaggttgaatctgaaatgatgggtggtggca-tataggcaaaaatagttatcaaag 28101116  T
Q  305 tcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 367  Q
     | | ||| ||||| |||||| |||| ||||||||||||||| |||||||||| ||| |||||    
T  28101117 acgatcttcatcttcaagctctatgtataatggtgatgtgagggtgcttgaatattggtgtcc 28101179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 95
Target Start/End: Complemental strand, 42982248 - 42982211
Alignment:
Q  58 ctctttcttcctcaaatatataaaattggaaccctaat 95  Q
    ||||||||||| |||||||||||| |||||||||||||    
T  42982248 ctctttcttccccaaatatataaatttggaaccctaat 42982211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 20494146 - 20494182
Alignment:
Q  58 ctctttcttcctcaaatatataaaattggaaccctaa 94  Q
    ||||||||||| |||||||||||| ||||||||||||    
T  20494146 ctctttcttccccaaatatataaatttggaaccctaa 20494182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 112; Significance: 2e-56; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 61 - 361
Target Start/End: Original strand, 17950853 - 17951152
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 160  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  17950853 tttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttc 17950952  T
Q  161 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 260  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||||| |||| || ||||||||    
T  17950953 ttccccaaatcaaaaaattacaaaccctaat-ttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatct 17951051  T
Q  261 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 360  Q
     |||||||| | |||||   |  ||||||||  |  ||| |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||    
T  17951052 aaaatgatgggaggtggtcatttgggcaaaaagagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 17951151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 61 - 361
Target Start/End: Original strand, 35174674 - 35174974
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 160  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  35174674 tttcttccccaaatatataaaattggaaccctaattttacaatgtgtaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttc 35174773  T
Q  161 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 260  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||||| |||| || ||||||||    
T  35174774 ttccccaaatcaaaaaattgcaaaccctaattttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatct 35174873  T
Q  261 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 360  Q
     |||| ||| | ||||    || ||||||||  |  ||| |||||||||||| ||||| |  ||||||||||||||||||| ||||||||| ||||||||    
T  35174874 aaaataatgggaggtgatcatatgggcaaaaagagctatcaaagtcaagcttcatcttcatcctccatgtttaatggtgatatgagagtgcctgaatgtt 35174973  T
Q  361 g 361  Q
    |    
T  35174974 g 35174974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 59 - 355
Target Start/End: Complemental strand, 17936339 - 17936042
Alignment:
Q  59 tctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgt 158  Q
    |||||||||||||||| |||||||||| |||||||||||| |||| | ||||||||| |||||||||||||||||||||| || |||||| ||  |||||    
T  17936339 tctttcttcctcaaatctataaaattgaaaccctaatttttcaatctctaatctacaatccaaaattcccaaaatttcttccattaattaatgacaacgt 17936240  T
Q  159 tcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaat 258  Q
    | || || | ||| |||| ||||||||||||||        |||||||| ||||| ||||||| ||||||    ||||||||||||||||||  ||||||    
T  17936239 tattgcctacttctaaaaacttcaaaccctaatttgttttgattgaatctgaaatccaaaatccccaaaaaaaattcaagcaaaattgttcagattgaat 17936140  T
Q  259 ctgaaatgatgaggggtgggtgtaagggc-aaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttga 355  Q
    | ||||||||| | |||||  ||| |||| |||| || || | |||||| ||||| ||||| ||  |  ||||||||||||||||| ||| |||||||    
T  17936139 ccgaaatgatgggtggtggacgtatgggcaaaaaacagttctcaaagtcgagcttcatcttcaaaatttatgtttaatggtgatgtcagaatgcttga 17936042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 61 - 361
Target Start/End: Complemental strand, 34345123 - 34344824
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 160  Q
    ||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||   |||| |||||| |||||||||  ||| ||||||    
T  34345123 tttcttcctaaaatatataaaattggaaccctaactttacaatgtgtaatctacactccaaaatcttcaaattttcttccaataattaagggtcacgttc 34345024  T
Q  161 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 260  Q
    |||||| | | |||||  | |||||||||||        |||| ||  ||||  |||||||  |||||||  || |||||||| |||| || ||||||||    
T  34345023 ttccccgaataaaaaaattgcaaaccctaattttttttaattggatatgaaaaccaaaatctgcaaaattcatttaagcaaaagtgttgaaattgaatct 34344924  T
Q  261 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 360  Q
     |||||||  |||||||   || ||||||||  |  ||| |||||||||||| | ||| |  ||||||||||||||||||||||||||||||||||||||    
T  34344923 aaaatgat-tggggtggtcatatgggcaaaaagagctatcaaagtcaagcttcaacttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 34344825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 61 - 189
Target Start/End: Original strand, 4289710 - 4289838
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 160  Q
    |||||||| ||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  4289710 tttcttccccaaatatataaaattggaatcctaattttacaatgtgtaatctatactccaaaatctccaaattttcttccaataattaagggtcacgttc 4289809  T
Q  161 ttccccaattcaaaaagcttcaaacccta 189  Q
    |||||||| |||||||  | |||||||||    
T  4289810 ttccccaaatcaaaaaattgcaaacccta 4289838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 10 - 183
Target Start/End: Complemental strand, 31210313 - 31210129
Alignment:
Q  10 accaaaatttccaaggatcaaattaattgatttgtagaaaatgctttgctctttcttcctcaaa---tatat--------aaaattggaaccctaatttt 98  Q
    |||||||||| ||||||  ||||| ||||||||||||||||||||||||||||||| ||||||    ||| |        || |||| || |||||||||    
T  31210313 accaaaattttcaaggactaaattgattgatttgtagaaaatgctttgctctttctccctcaacggttatttcttccccaaatattgaaaacctaatttt 31210214  T
Q  99 acaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaaagcttcaa 183  Q
    ||||| ||||||||||||||||||||  | ||||| |  | ||||||||||||||||| ||||||||||||||||||| ||||||    
T  31210213 acaatctgtaatctacactccaaaatctcaaaaatattatccaataattagtggtaactttcttccccaattcaaaaaacttcaa 31210129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 57 - 191
Target Start/End: Original strand, 33277101 - 33277234
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    ||||||||||| ||||||||||||| |||||||||| |||||| ||| ||| | ||| | | |||||| ||||||||||||| ||  ||||  |  |||     
T  33277101 gctctttcttc-tcaaatatataaatttggaaccctgattttataatttgtcacctagagttcaaaatccccaaaatttcttccatgaattgatattaaa 33277199  T
Q  157 gttcttccccaattcaaaaagcttcaaaccctaat 191  Q
    |||||||||||||||||||| ||| ||||||||||    
T  33277200 gttcttccccaattcaaaaaacttaaaaccctaat 33277234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 58 - 191
Target Start/End: Original strand, 7371453 - 7371586
Alignment:
Q  58 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 157  Q
    ||||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  || |    
T  7371453 ctctttcttccccaaatatataaatttggaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatgtcaatg 7371552  T
Q  158 ttcttccccaattcaaaaagcttcaaaccctaat 191  Q
    ||||||||||||||||||| ||| ||||||||||    
T  7371553 ttcttccccaattcaaaaaacttaaaaccctaat 7371586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 59 - 183
Target Start/End: Original strand, 30639903 - 30640027
Alignment:
Q  59 tctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgt 158  Q
    ||||||||||| || | ||||||||||||||| |||||  ||||| || ||||||||||| |||||  || ||||||| | ||||||| ||||||   ||    
T  30639903 tctttcttccttaattgtataaaattggaaccataattacacaatctgcaatctacactctaaaatcacctaaatttcctccaataataagtggtccagt 30640002  T
Q  159 tcttccccaattcaaaaagcttcaa 183  Q
    ||||||  |||||||||| ||||||    
T  30640003 tcttccataattcaaaaaacttcaa 30640027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 57 - 176
Target Start/End: Complemental strand, 11356922 - 11356803
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    |||||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||| | | ||||||  || ||||||||| ||  ||||  ||  ||     
T  11356922 gctctttcttccccaaatatataaatttggaaccctaatgttataatttgttacctagagttcaaaatctcccaaatttcttccatgaattgatgtcaat 11356823  T
Q  157 gttcttccccaattcaaaaa 176  Q
    ||||||||||||||||||||    
T  11356822 gttcttccccaattcaaaaa 11356803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 138
Target Start/End: Original strand, 33267342 - 33267419
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctt 138  Q
    |||||||| |||||||| ||| ||||||||||||| ||| ||| ||| | ||| | | |||||| |||||||||||||    
T  33267342 tttcttccccaaatatacaaatttggaaccctaatgttataatttgtcacctagagttcaaaatccccaaaatttctt 33267419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 71 - 147
Target Start/End: Original strand, 14337985 - 14338061
Alignment:
Q  71 aaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataatt 147  Q
    ||||||||||| ||||||||||||||||| ||| ||| |  || | | |||||| ||||||||||||| || |||||    
T  14337985 aaatatataaatttggaaccctaattttataatttgtcacatagagttcaaaatccccaaaatttcttccattaatt 14338061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 99; Significance: 9e-49; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 57 - 191
Target Start/End: Complemental strand, 1344612 - 1344478
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||| | ||||||||||||||||||  |||||||||||| |||||||| ||||||||    
T  1344612 gctctttcttccctaaatatataaaattggaaccctaattttacaatctttaatctacactccaaaatctccaaaatttcttccaataattggtggtaac 1344513  T
Q  157 gttcttccccaattcaaaaagcttcaaaccctaat 191  Q
    |||||||||||||||||||| ||||||||||||||    
T  1344512 gttcttccccaattcaaaaaacttcaaaccctaat 1344478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 61 - 361
Target Start/End: Original strand, 42619581 - 42619875
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 160  Q
    |||||||| ||||| |||||||||||||||||||||||||||| | ||||||||||||||||||  ||||| |||||| |||||||||  ||| ||||||    
T  42619581 tttcttccccaaatgtataaaattggaaccctaattttacaatgtttaatctacactccaaaatctccaaattttcttccaataattaagggtcacgttc 42619680  T
Q  161 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 260  Q
    |||||||| |||||||  | |||||||||||        |||||||| ||||  |||||||  |||||||  ||||||||||| |||| || ||||||||    
T  42619681 ttccccaaatcaaaaaattgcaaaccctaattttttttaattgaatctgaaaaccaaaatctgcaaaattcattcaagcaaaactgttgaaattgaatct 42619780  T
Q  261 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 360  Q
     |||||||| |||||||   || |||    |||   ||  |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||    
T  42619781 aaaatgatggggggtggtcatatggg---gagc---taccaaagtcaagcttcatcttcatcctccatgtttaatggtgatgtgagagtgcttgaatgtt 42619874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 61 - 186
Target Start/End: Complemental strand, 24497874 - 24497749
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 160  Q
    ||||||||  ||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| | || ||||||||    
T  24497874 tttcttccctaaatatataaaattgaaactctaattttacaataagtaatctacactccaaaattcccaaaatttcttccaataatcaatgataacgttc 24497775  T
Q  161 ttccccaattcaaaaagcttcaaacc 186  Q
    |||||||||||||||| |||||||||    
T  24497774 ttccccaattcaaaaaccttcaaacc 24497749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 57 - 367
Target Start/End: Original strand, 18726853 - 18727164
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    |||||||||||| ||| | |||||||||||||||||||||  ||||| |||||||||||||| | |||    |||||||  | ||||||| ||||||       
T  18726853 gctctttcttccccaattgtataaaattggaaccctaattacacaatctgtaatctacactctataatcatgaaaattttctccaataataagtggttca 18726952  T
Q  157 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnn-attgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttg 255  Q
    ||||| |||||||||||||| ||||||||||||||         | ||||||  |||  |||||||  ||||||||||| |||||| | | || || |||    
T  18726953 gttctgccccaattcaaaaaacttcaaaccctaatttttttcgtagtgaatctcaaagccaaaatcctcaaaatttcttgaagcaagactattgaaattg 18727052  T
Q  256 aatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttga 355  Q
    |||||||||||||| ||||||||  ||  || |||| |  |||||||||| |||||| ||||| |||||||| ||||||||||| |||||||||||||||    
T  18727053 aatctgaaatgatgtggggtgggaatataggaaaaaacggttatgaaagtaaagcttcatcttcaagctccaagtttaatggtgttgtgagagtgcttga 18727152  T
Q  356 atgttgatgtcc 367  Q
    |||||| |||||    
T  18727153 atgttggtgtcc 18727164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 57 - 359
Target Start/End: Original strand, 38176923 - 38177225
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    |||||||||||| ||| | ||||| |||||||||||||||  |||||    ||| ||||||| |||||| ||||||| || | |||| || | ||||       
T  38176923 gctctttcttccccaattgtataacattggaaccctaattacacaatcaacaatttacactctaaaattaccaaaatatcctccaattataaatggtcca 38177022  T
Q  157 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 256  Q
    |||||||||||||||||||| ||||||||||||||        |||||||  ||||  |||||||  ||||||||||| |||||||| | || || ||||    
T  38177023 gttcttccccaattcaaaaaacttcaaaccctaattttttcgtattgaatttgaaagccaaaatcctcaaaatttcttgaagcaaaactattgaaattga 38177122  T
Q  257 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaa 356  Q
    ||||||||||||| |||||||   || ||| ||||  | ||||||||||| ||||| |||||  ||||||| ||||||||||| ||||||||||||||||    
T  38177123 atctgaaatgatggggggtggaaatatgggaaaaaatagttatgaaagtcgagcttcatcttcgagctccaagtttaatggtgttgtgagagtgcttgaa 38177222  T
Q  357 tgt 359  Q
    |||    
T  38177223 tgt 38177225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 57 - 359
Target Start/End: Original strand, 38204147 - 38204449
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    |||||||||||| ||| | ||||| |||||||||||||||  |||||    ||| ||||||| |||||| ||||||| || | |||| || | ||||       
T  38204147 gctctttcttccccaattgtataacattggaaccctaattacacaatcaacaatttacactctaaaattaccaaaatatcctccaattataaatggtcca 38204246  T
Q  157 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttga 256  Q
    |||||||||||||||||||| ||||||||||||||        |||||||  ||||  |||||||  ||||||||||| |||||||| | || || ||||    
T  38204247 gttcttccccaattcaaaaaacttcaaaccctaattttttcgtattgaatttgaaagccaaaatcctcaaaatttcttgaagcaaaactattgaaattga 38204346  T
Q  257 atctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaa 356  Q
    ||||||||||||| |||||||   || ||| ||||  | ||||||||||| ||||| |||||  ||||||| ||||||||||| ||||||||||||||||    
T  38204347 atctgaaatgatggggggtggaaatatgggaaaaaatagttatgaaagtcgagcttcatcttcgagctccaagtttaatggtgttgtgagagtgcttgaa 38204446  T
Q  357 tgt 359  Q
    |||    
T  38204447 tgt 38204449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 61 - 367
Target Start/End: Original strand, 35291343 - 35291644
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 160  Q
    |||||||| ||| | |||||||||| |||||| |||  ||||   | |||||||||||||||||  |||||||||| | || |||| ||||||   ||||    
T  35291343 tttcttccccaattgtataaaattgaaaccctgattacacaa---gcaatctacactccaaaatcaccaaaatttcctccagtaataagtggtccggttc 35291439  T
Q  161 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatct 260  Q
    |||||||||||| ||| |||||||||||||         |||||||  |||  ||||||||  ||||||||||| |||||||| | || || ||| ||||    
T  35291440 ttccccaattcacaaaacttcaaaccctaac-tttttgcattgaatttgaatgtcaaaatcctcaaaatttcttgaagcaaaactattgaaattggatct 35291538  T
Q  261 gaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgtt 360  Q
    ||||||||| ||||||||  || ||| |||| || |||||||||||||| || ||||| |||||||| ||||||||||||||||| ||||||||||||||    
T  35291539 gaaatgatg-ggggtgggaatatgggaaaaaacagttatgaaagtcaagtttcatcttcaagctccaagtttaatggtgatgtgatagtgcttgaatgtt 35291637  T
Q  361 gatgtcc 367  Q
    | |||||    
T  35291638 ggtgtcc 35291644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 76 - 367
Target Start/End: Complemental strand, 40330296 - 40330004
Alignment:
Q  76 tataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaa 175  Q
    |||||||||||||||||||||  |||||||| |||||||||||||||||  | |||||||| | ||||||| ||||||   | ||||||||||||||| |    
T  40330296 tataaaattggaaccctaattacacaatatgcaatctacactccaaaatcacaaaaatttcctccaataataagtggtccagctcttccccaattcaaca 40330197  T
Q  176 agcttcaaaccctaatannnnnnn-attgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgagggg 274  Q
    | ||| ||||||||||         |||||||  ||||  |||||||   |||||||||| |||||||| | || || |||| |||||||||||| ||||    
T  40330196 aacttgaaaccctaattttttccgtattgaatatgaaagccaaaatcttgaaaatttcttgaagcaaaactattgaaattgattctgaaatgatgggggg 40330097  T
Q  275 tgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 367  Q
    |||   || ||| ||||  | ||||||||||| ||||| ||||| ||  |||| ||||||||||||||||||||||||||||||||| |||||    
T  40330096 tggaaatatgggaaaaaatagttatgaaagtcgagcttcatcttcaatttccaagtttaatggtgatgtgagagtgcttgaatgttggtgtcc 40330004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 57 - 367
Target Start/End: Complemental strand, 32089725 - 32089411
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    |||||||||||| ||| | |||||||||||||||||||||  ||||| || ||||||||||| | |||    |||||||  | ||||||| || |||       
T  32089725 gctctttcttccccaattgtataaaattggaaccctaattacacaatctgcaatctacactctataatcatgaaaatttactccaataataagaggttca 32089626  T
Q  157 gttcttccccaattcaaaaagcttcaaaccctaatannnnnnn-attgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttg 255  Q
    ||||| |||||||||||||| ||||||||||||||         | |||||| ||||  |||||||  ||||||||||| |||||||| | || || |||    
T  32089625 gttctgccccaattcaaaaaacttcaaaccctaatttttttcgtagtgaatctgaaagccaaaatcctcaaaatttcttgaagcaaaactattgaaattg 32089526  T
Q  256 aat-ctg--aaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgct 352  Q
    ||| ||   |||||||| ||||||||  || ||| |||| |  ||||||||||||||||| ||||| |||||||| ||||||||||| ||||||||||||    
T  32089525 aatacttcaaaatgatgtggggtgggaatatgggaaaaaacggttatgaaagtcaagcttcatcttcaagctccaagtttaatggtgttgtgagagtgct 32089426  T
Q  353 tgaatgttgatgtcc 367  Q
    ||||||||| |||||    
T  32089425 tgaatgttggtgtcc 32089411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 59 - 191
Target Start/End: Original strand, 1343482 - 1343614
Alignment:
Q  59 tctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgt 158  Q
    ||||||||||  |||||||||||||||  |||||||||||| ||| | ||| ||||||||||||||  |||||||||||| ||||| |||||||||||||    
T  1343482 tctttcttccctaaatatataaaattgacaccctaattttataatctttaaactacactccaaaatctccaaaatttcttccaatagttagtggtaacgt 1343581  T
Q  159 tcttccccaattcaaaaagcttcaaaccctaat 191  Q
    | |||||||||| ||||| || |||||||||||    
T  1343582 ttttccccaatttaaaaaactccaaaccctaat 1343614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 61 - 291
Target Start/End: Complemental strand, 27350322 - 27350095
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttc 160  Q
    |||||| | ||||| |||||||||||||||||||||||| ||| | ||||  |||| ||||||||||||||| ||||||||||||||||| |||||||||    
T  27350322 tttctttcccaaatgtataaaattggaaccctaattttataatctttaattcacacgccaaaattcccaaaaattctttcaataattagt-gtaacgttc 27350224  T
Q  161 ttccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaat-tcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatc 259  Q
     ||||||||| ||| | | |||||||||| |        ||||||||| ||||   |||||| ||||||||||||||| ||||| ||||  | ||||||     
T  27350223 atccccaattgaaataacctcaaaccctatt--ttttttattgaatccaaaataaaaaaatccccaaaatttcttcaaacaaaactgttgtaattgaata 27350126  T
Q  260 tgaaatgatgaggggtgggtgtaagggcaaaa 291  Q
     ||||||||| |||||||||||| ||||||||    
T  27350125 agaaatgatg-ggggtgggtgtatgggcaaaa 27350095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 214 - 367
Target Start/End: Original strand, 43317176 - 43317329
Alignment:
Q  214 tcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagcttt 313  Q
    ||||||||  ||||||||||| |||||||| |  | || ||| ||||||||||||| ||||||||  || ||  |||| || ||||||||||| |||||     
T  43317176 tcaaaatcctcaaaatttcttgaagcaaaactagtgaaattggatctgaaatgatggggggtgggaatatggaaaaaaacagttatgaaagtcgagcttc 43317275  T
Q  314 atctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 367  Q
    ||||| || ||||| ||||||||||||||||||||||||||||||||| |||||    
T  43317276 atcttcaaactccaagtttaatggtgatgtgagagtgcttgaatgttggtgtcc 43317329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 76 - 361
Target Start/End: Original strand, 32836186 - 32836470
Alignment:
Q  76 tataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaa 175  Q
    ||||| |||||||||||||||  ||||| || ||| ||||||  |||||  ||||||| || | |||  || | |||| | |||||||||||||||||||    
T  32836186 tataacattggaaccctaattacacaatctgcaatttacactataaaatcaccaaaatatcctccaaatataaatggtcaagttcttccccaattcaaaa 32836285  T
Q  176 agcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggt 275  Q
    | ||||||||||||||        |||||||   |||  |||||||  |||||  | || |||||||| | || || ||||||||||||||||| |||||    
T  32836286 aacttcaaaccctaattttttcgtattgaatttaaaagccaaaatcctcaaaaaattttgaagcaaaactattgaaattgaatctgaaatgatg-ggggt 32836384  T
Q  276 gggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttg 361  Q
    |||  || | | |||| || ||||||||||| ||||| |||||  ||||||| ||||||||||| |||||||||||||||||||||    
T  32836385 gggaatatgtgaaaaaacagttatgaaagtcgagcttcatcttcgagctccaagtttaatggtgttgtgagagtgcttgaatgttg 32836470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 57 - 291
Target Start/End: Complemental strand, 6116700 - 6116465
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    |||||||||||| ||||| |||||||||| |||||||||||| |||| | ||||||||| || ||||| ||||||||||||| || ||||||     |||    
T  6116700 gctctttcttccccaaatctataaaattgaaaccctaatttttcaatctctaatctacagtcaaaaatccccaaaatttcttccattaatta---acaac 6116604  T
Q  157 --gttcttccccaattcaaaaagcttcaaaccctaa--tannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaat 252  Q
       ||||||||  |||| |||| |||||||||||||  |        |||||||  ||||| ||||||| ||||||||||||||  |||||||||||||     
T  6116603 catttcttccctgattctaaaaacttcaaaccctaatttttgttttgattgaatatgaaatccaaaatccccaaaatttcttcattcaaaattgttcaaa 6116504  T
Q  253 ttgaatctgaaatgatgaggggtgggtgtaagggcaaaa 291  Q
    ||||||| ||||||||| | | ||||||||  |||||||    
T  6116503 ttgaatccgaaatgatgggtgatgggtgtataggcaaaa 6116465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 215 - 367
Target Start/End: Complemental strand, 18341745 - 18341593
Alignment:
Q  215 caaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggtgggtgtaagggcaaaagcaattatgaaagtcaagcttta 314  Q
    ||||||| ||||||||||||||| ||||||||||||  ||||||||||||||||| | |||||  ||| |||||||| || || | ||| |  ||||| |    
T  18341745 caaaatccccaaaatttcttcaatcaaaattgttcagattgaatctgaaatgatgggtggtggtcgtatgggcaaaaacagttctcaaacttgagcttca 18341646  T
Q  315 tctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 367  Q
    || | || ||| |||||||| |||||||| ||| ||||||||||||| |||||    
T  18341645 tcctcaaactctatgtttaacggtgatgtaagaatgcttgaatgttggtgtcc 18341593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 57 - 191
Target Start/End: Original strand, 18623765 - 18623899
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    |||||||||||| |||||||||||| ||||||||||||| ||| |||  || | ||| | | |||||| ||||||||||||| ||  ||||  ||  ||     
T  18623765 gctctttcttccccaaatatataaatttggaaccctaatgttataattcgtcacctagagttcaaaatccccaaaatttcttacatgaattgatgccaaa 18623864  T
Q  157 gttcttccccaattcaaaaagcttcaaaccctaat 191  Q
    |||||||||||||||||||| ||| ||||||||||    
T  18623865 gttcttccccaattcaaaaaacttaaaaccctaat 18623899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 191
Target Start/End: Original strand, 32134556 - 32134690
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    |||||||||||  |||||||||||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  ||     
T  32134556 gctctttcttctacaaatatataaatttggaaccctaatgttataatttgtcacctatagttcaaaatcccccaaatttcttccatgaattgatgtcaat 32134655  T
Q  157 gttcttccccaattcaaaaagcttcaaaccctaat 191  Q
    |||||||||||||||||||| ||| ||||||||||    
T  32134656 gttcttccccaattcaaaaaacttaaaaccctaat 32134690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 339
Target Start/End: Complemental strand, 35400489 - 35400226
Alignment:
Q  76 tataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaattcaaaa 175  Q
    |||||||||||||||||||||  |||||||| ||||||||||| | ||||   |||||||| | ||||||| ||||||    ||||  ||||||| ||||    
T  35400489 tataaaattggaaccctaattacacaatatgcaatctacactctataattatgaaaatttcctccaataataagtggtccaattctgtcccaatttaaaa 35400390  T
Q  176 agcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctgaaatgatgaggggt 275  Q
    | |||||||||  | |        | ||| || ||||  |||||||  ||||||||||| |||||||| | || || ||||||||||||||||| |||||    
T  35400389 aacttcaaacctaatttttttcgtagtgagtctgaaagccaaaatcctcaaaatttcttgaagcaaaactattgaaattgaatctgaaatgatggggggt 35400290  T
Q  276 gggtgtaagggcaaaagcaattatgaaagtcaagctttatctttaagctccatgtttaatggtg 339  Q
    |||  || ||| ||||    || ||||||||||| || ||||| || ||||| |||||||||||    
T  35400289 gggaatatgggaaaaaaaggttttgaaagtcaagtttcatcttcaaactccaagtttaatggtg 35400226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 58 - 191
Target Start/End: Complemental strand, 34328600 - 34328466
Alignment:
Q  58 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaat-tcccaaaatttctttcaataattagtggtaac 156  Q
    ||||||||||| |||||||||||| ||||||||||||| ||| ||| |||   ||| | | ||||||  ||||||||||||| ||  ||||  ||  ||     
T  34328600 ctctttcttccccaaatatataaatttggaaccctaatattataatttgtcgcctagagttcaaaatcccccaaaatttcttccatgaattgatgtcaat 34328501  T
Q  157 gttcttccccaattcaaaaagcttcaaaccctaat 191  Q
    |||||||||||||||||||| ||| ||||||||||    
T  34328500 gttcttccccaattcaaaaaacttaaaaccctaat 34328466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 191
Target Start/End: Complemental strand, 12738470 - 12738337
Alignment:
Q  58 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 157  Q
    |||||||||||  ||| ||||||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  || |    
T  12738470 ctctttcttccctaaacatataaatttggaaccctaatgttataatttgttacctagagttcaaaatcccccaaatttcttacatgaattgatgtcaatg 12738371  T
Q  158 ttcttccccaattcaaaaagcttcaaaccctaat 191  Q
    ||||||||||||||||||| ||| ||||||||||    
T  12738370 ttcttccccaattcaaaaaacttaaaaccctaat 12738337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 191
Target Start/End: Complemental strand, 12801293 - 12801160
Alignment:
Q  58 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 157  Q
    |||||||||||  ||| ||||||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  || |    
T  12801293 ctctttcttccctaaacatataaatttggaaccctaatgttataatttgttacctagagttcaaaatcccccaaatttcttacatgaattgatgtcaatg 12801194  T
Q  158 ttcttccccaattcaaaaagcttcaaaccctaat 191  Q
    ||||||||||||||||||| ||| ||||||||||    
T  12801193 ttcttccccaattcaaaaaacttaaaaccctaat 12801160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 191
Target Start/End: Complemental strand, 27077256 - 27077123
Alignment:
Q  58 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 157  Q
    ||||||||||| |||||  |||| |||||||||||||||||| ||| ||| |   | | | ||||||  | |||||||||| || |||||  ||  ||||    
T  27077256 ctctttcttccccaaatccataacattggaaccctaattttataatttgtcactgagagttcaaaatctctaaaatttcttccattaattgatgacaacg 27077157  T
Q  158 ttcttccccaattcaaaaagcttcaaaccctaat 191  Q
    ||||||||||||||||||| ||||||| ||||||    
T  27077156 ttcttccccaattcaaaaaacttcaaaacctaat 27077123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 191
Target Start/End: Complemental strand, 33257559 - 33257426
Alignment:
Q  58 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 157  Q
    ||||||||||| ||| | |||||||||| |||||| |||  ||||| || ||| ||||||| | |||    |||||||| | ||||||| ||||||   |    
T  33257559 ctctttcttccccaattgtataaaattgtaaccctgattacacaatctgcaatatacactctataatcatgaaaatttcctccaataataagtggttcag 33257460  T
Q  158 ttcttccccaattcaaaaagcttcaaaccctaat 191  Q
    |||| |||||||||||||| ||||||||||||||    
T  33257459 ttctgccccaattcaaaaaacttcaaaccctaat 33257426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 320 - 367
Target Start/End: Complemental strand, 33257309 - 33257262
Alignment:
Q  320 aagctccatgtttaatggtgatgtgagagtgcttgaatgttgatgtcc 367  Q
    |||||||| ||||||||||| ||||||||||||||||||||| |||||    
T  33257309 aagctccaagtttaatggtgttgtgagagtgcttgaatgttggtgtcc 33257262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 68
Target Start/End: Complemental strand, 24497947 - 24497885
Alignment:
Q  6 agtgaccaaaatttccaaggatcaaattaattgatttgtagaaaatgctttgctctttcttcc 68  Q
    ||||| |||||||| |||||| |||||| ||||||||| | |||||| |||||||||||||||    
T  24497947 agtgatcaaaatttacaaggaccaaattgattgatttgcataaaatgttttgctctttcttcc 24497885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 188
Target Start/End: Original strand, 41494167 - 41494285
Alignment:
Q  70 caaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttcttccccaat 169  Q
    |||||||||||| ||||||||| ||| ||| ||| ||| | ||| | | |||||| ||||||||||||| ||  ||||  ||  || |||||||||||||    
T  41494167 caaatatataaatttggaacccgaatgttataatttgtcacctagagttcaaaatccccaaaatttcttccatgaattgatgacaaagttcttccccaat 41494266  T
Q  170 tcaaaaagcttcaaaccct 188  Q
    ||||||| ||| |||||||    
T  41494267 tcaaaaaacttaaaaccct 41494285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 57 - 138
Target Start/End: Original strand, 30464263 - 30464344
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctt 138  Q
    |||||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||| | | |||||| ||| |||||||||    
T  30464263 gctctttcttccccaaatatataaatttggaaccctaatgttataatttgttacctagagttcaaaatcccccaaatttctt 30464344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 138
Target Start/End: Original strand, 28035772 - 28035852
Alignment:
Q  58 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctt 138  Q
    |||||||||||||| ||||||||||||| |||| ||| ||| |||| | |||| |||| |  |||||| ||||||||||||    
T  28035772 ctctttcttcctcagatatataaaattgaaaccttaacttttcaatctctaatttacagtttaaaatttccaaaatttctt 28035852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 314 - 361
Target Start/End: Complemental strand, 27077010 - 27076963
Alignment:
Q  314 atctttaagctccatgtttaatggtgatgtgagagtgcttgaatgttg 361  Q
    ||||| |||||| || |||||||||||||||||||| |||||||||||    
T  27077010 atcttcaagctctatttttaatggtgatgtgagagtacttgaatgttg 27076963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 147
Target Start/End: Complemental strand, 28821860 - 28821770
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataatt 147  Q
    |||||||||||| |||||||||||| ||| ||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| || |||||    
T  28821860 gctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccattaatt 28821770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 95
Target Start/End: Original strand, 29620495 - 29620529
Alignment:
Q  61 tttcttcctcaaatatataaaattggaaccctaat 95  Q
    ||||||||||||||||||||| |||||||||||||    
T  29620495 tttcttcctcaaatatataaatttggaaccctaat 29620529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 95
Target Start/End: Complemental strand, 8541072 - 8541036
Alignment:
Q  59 tctttcttcctcaaatatataaaattggaaccctaat 95  Q
    |||||||||| |||||||||||| |||||||||||||    
T  8541072 tctttcttccccaaatatataaatttggaaccctaat 8541036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 138
Target Start/End: Complemental strand, 19998229 - 19998149
Alignment:
Q  58 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctt 138  Q
    ||||||||||| ||||| |||||||| | ||||||||||||| ||| ||| | ||| | |  ||||||| |||||||||||    
T  19998229 ctctttcttccccaaatctataaaatggaaaccctaattttataatttgtcacctagagtttaaaattctcaaaatttctt 19998149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 63 - 291
Target Start/End: Complemental strand, 38082 - 37856
Alignment:
Q  63 tcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacgttctt 162  Q
    |||||| ||||| ||||||||||||||||||||||||||||   ||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  38082 tcttccccaaatgtataaaattggaaccctaattttacaatcattaatccacactccaaaattcccaaaaattcttccaataattagtggtaacgttctt 37983  T
Q  163 ccccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaat-tcaaaatcaccaaaatttcttcaagcaaaattgttcaatttgaatctg 261  Q
    |||||||| ||| | | ||||||||||||        ||||||||||||||   |||||| |||||||| |||||| ||||| ||||  | |||||||||    
T  37982 ccccaattgaaataacctcaaaccctaat--tttttgattgaatccgaaatcaaaaaatccccaaaattccttcaaacaaaactgttgtaattgaatctg 37885  T
Q  262 aaatgatgaggggtgggtgtaagggcaaaa 291  Q
    ||||||||| ||||||||||| ||||||||    
T  37884 aaatgatga-gggtgggtgtatgggcaaaa 37856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 57 - 278
Target Start/End: Original strand, 57669 - 57890
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    |||||||||||| |||||||||||||||| |||||| ||| ||| || ||||||||||||||||||||  ||||||||||||  |||||| |||||||||    
T  57669 gctctttcttccccaaatatataaaattgaaaccctgattatactatctgtaatctacactccaaaataaccaaaatttcttcgaataataagtggtaac 57768  T
Q  157 gttcttcc-ccaattcaaaaagcttcaaaccctaatannnnnnnattgaatccgaaattcaaaatcaccaaaatttcttcaagcaaaattgttcaatttg 255  Q
     ||||||| | |||||||||| ||||||||||| ||        |||||||| ||||| |||||||   ||||||||||  ||||||| | || || |||    
T  57769 attcttcctctaattcaaaaaacttcaaaccct-atttttttttattgaatctgaaatccaaaatccaaaaaatttctttcagcaaaactattgaaattg 57867  T
Q  256 aatctgaaatgatgaggggtggg 278  Q
    |||| ||||| ||||||||||||    
T  57868 aatccgaaatcatgaggggtggg 57890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1041 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold1041
Description:

Target: scaffold1041; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 124
Target Start/End: Complemental strand, 2710 - 2643
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaat 124  Q
    |||||||||||| ||||||||||||| |||||| |||||| ||| |||||||||||||||||||||||    
T  2710 gctctttcttccccaaatatataaaactggaactctaattatactatatgtaatctacactccaaaat 2643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1041; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 57 - 124
Target Start/End: Original strand, 2356 - 2423
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaat 124  Q
    |||||||||||| ||||||||||||||||||||||| ||| ||| ||  |||||||||||||||||||    
T  2356 gctctttcttccccaaatatataaaattggaaccctcattatactatcagtaatctacactccaaaat 2423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 186
Target Start/End: Original strand, 4446 - 4574
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||| ||| ||||| | |  |||||  |||||| ||||| || |||||  ||  |||    
T  4446 gctctttctttctcaaatctataaaattggaactctaattttacaatttgtcatctagagtttaaaatctccaaaa-ttcttccattaattgatgacaac 4544  T
Q  157 gttcttccccaattcaaaaagcttcaaacc 186  Q
    |||||||| |||| | |||| |||||||||    
T  4545 gttcttcctcaatgctaaaaacttcaaacc 4574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 191
Target Start/End: Complemental strand, 9666 - 9533
Alignment:
Q  58 ctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaacg 157  Q
    ||||||||||| |||||||||||| ||| ||||||||| ||| ||| ||| | ||| | | |||||| ||| ||||||||| ||  ||||  ||  || |    
T  9666 ctctttcttccccaaatatataaatttgaaaccctaatgttataatttgtcacctagagttcaaaatcccccaaatttcttccatgaattgatgtcaatg 9567  T
Q  158 ttcttccccaattcaaaaagcttcaaaccctaat 191  Q
    || |||||||||||||||| ||| ||||||||||    
T  9566 tttttccccaattcaaaaaacttaaaaccctaat 9533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 57 - 176
Target Start/End: Complemental strand, 1283 - 1164
Alignment:
Q  57 gctctttcttcctcaaatatataaaattggaaccctaattttacaatatgtaatctacactccaaaattcccaaaatttctttcaataattagtggtaac 156  Q
    |||||||||||| |||||||||||| ||||||||||||| ||| ||| ||| | ||| | | ||||||  || ||||||||| ||  ||||  ||  ||     
T  1283 gctctttcttccccaaatatataaatttggaaccctaatgttataatttgttacctagagttcaaaatctcccaaatttcttccatgaattgatgtcaat 1184  T
Q  157 gttcttccccaattcaaaaa 176  Q
    ||||||||||||||||||||    
T  1183 gttcttccccaattcaaaaa 1164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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