View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8204_high_17 (Length: 286)
Name: NF8204_high_17
Description: NF8204
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8204_high_17 |
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Alignment Details
Target: chr5 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 36167096 - 36166830
Alignment:
| Q |
1 |
ataggtaacagataaaatcatacgaaagaacatacacatgtgattaataaaaatggataaatactggcaggcataatggacgatatttcattttatcctt |
100 |
Q |
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| T |
36167096 |
ataggtaacagataaaatcatacgaaagaacatacacatgtgattaataaaaatggataaatactggcaggcataatggacgatatttcattttatcctt |
36166997 |
T |
|
| Q |
101 |
cggatatataataaaattgaaaggggtctgtaaaatgtgttttcattttcatatatacagacaaacaattcaaattcaatttttatattaataaataatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36166996 |
cggatatataataaaattgaaaggggtctgtaaaatgtgttttcattttcatatatacagacaaacaattcaaattcaatttttatattaataaataatt |
36166897 |
T |
|
| Q |
201 |
tgaaatgtcacgagaaacttttctgaattgagcaatacaattttctgaataattggaccctaaaatt |
267 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36166896 |
tgaaatgtcacgagaaacttttctgaattgagcaatacaattttctgaataattggaccctaaaatt |
36166830 |
T |
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