View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8206A_low_113 (Length: 251)
Name: NF8206A_low_113
Description: NF8206A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8206A_low_113 |
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Alignment Details
Target: chr8 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 34041132 - 34040908
Alignment:
| Q |
1 |
ttggactcgacctctctacagtttcaacacactgtaaaattaaagataaaaccatttaaccatcaggaaattaaatcatttacaaactaaaacatgcatc |
100 |
Q |
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| T |
34041132 |
ttggactcgacctctctacagtttcaacacactgtaaaattaaagataaaaccatttaaccatcaggaaattaaatcatttacaaaccaaaacatgcatc |
34041033 |
T |
|
| Q |
101 |
agaaagactaaagcaattgatcaaggtggatgagcttcacaatcatgaatacttgccaacattaaaagggagaatgctttctcctcttataatatattct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
34041032 |
agaaagactaaagcaattgatcaaggtggatgagcttcacaatcatgaatacttgccaacatcaaaagggagaatgctttctcctcttataatatattct |
34040933 |
T |
|
| Q |
201 |
cataatagccctcctactacaaagt |
225 |
Q |
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||||||||||||||||||||||||| |
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| T |
34040932 |
cataatagccctcctactacaaagt |
34040908 |
T |
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