View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8206A_low_143 (Length: 243)

Name: NF8206A_low_143
Description: NF8206A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8206A_low_143
NF8206A_low_143
[»] chr2 (16 HSPs)
chr2 (19-231)||(8579553-8579765)
chr2 (19-229)||(9061209-9061419)
chr2 (20-89)||(9364511-9364580)
chr2 (139-231)||(17566149-17566241)
chr2 (110-231)||(10347740-10347861)
chr2 (19-89)||(7115835-7115905)
chr2 (109-231)||(8573571-8573693)
chr2 (19-89)||(9284380-9284450)
chr2 (111-168)||(9291899-9291956)
chr2 (19-88)||(10335738-10335807)
chr2 (192-231)||(7611976-7612015)
chr2 (109-152)||(9274475-9274518)
chr2 (192-231)||(9364665-9364704)
chr2 (18-80)||(8573725-8573787)
chr2 (19-80)||(9291804-9291865)
chr2 (131-231)||(12018954-12019054)
[»] chr3 (2 HSPs)
chr3 (19-231)||(39427495-39427719)
chr3 (109-231)||(37462443-37462565)
[»] chr4 (2 HSPs)
chr4 (107-231)||(561174-561298)
chr4 (20-85)||(561066-561131)
[»] chr5 (2 HSPs)
chr5 (107-231)||(36224364-36224494)
chr5 (32-88)||(36224295-36224351)
[»] chr1 (4 HSPs)
chr1 (19-81)||(29423147-29423209)
chr1 (19-89)||(29453494-29453564)
chr1 (19-81)||(29467978-29468040)
chr1 (22-81)||(29443519-29443578)
[»] chr7 (3 HSPs)
chr7 (22-80)||(45243555-45243613)
chr7 (22-80)||(45230293-45230351)
chr7 (112-231)||(45243656-45243775)
[»] chr8 (1 HSPs)
chr8 (19-76)||(41966911-41966968)


Alignment Details
Target: chr2 (Bit Score: 201; Significance: 1e-110; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 19 - 231
Target Start/End: Complemental strand, 8579765 - 8579553
Alignment:
Q  19 aattaggaattccttgaacacaagtaacttcttcacttttgagatcataccaaaacagcttcttacaatctctatagagatcaccttttacttccaacag 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8579765 aattaggaattccttgaacacaagtaacttcttcacttttgagatcataccaaaacagcttcttacaatctctatagagattaccttttacttccaacag 8579666  T
Q  119 aaatttacttctatcactagaataacataaaggcttcaaagatctcaaaggtttattgaagcacgaatcctcaaaagtaaacaatttacaccaactatct 218  Q
    || |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8579665 aactttacttctatcactagaataacacaaaggcttcaaagatctcaaaggtttattgaagcacgaatcctcaaaagtaaacaatttacaccaactatct 8579566  T
Q  219 ctaaatccatatt 231  Q
    |||||||||||||    
T  8579565 ctaaatccatatt 8579553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 229
Target Start/End: Complemental strand, 9061419 - 9061209
Alignment:
Q  19 aattaggaattccttgaacacaagtaacttcttcacttttgagatcataccaaaacagcttcttacaatctctatagagatcaccttttacttccaacag 118  Q
    ||||||||||||||| |||| || |||||| |||||| |||||||||||||||||||||||| ||  |  | |||  |  | |   ||| ||||||||||    
T  9061419 aattaggaattccttcaacataactaacttgttcactcttgagatcataccaaaacagcttcctaagagttttatccaagttaggatttgcttccaacag 9061320  T
Q  119 aaatttacttctatcactagaataacataaaggcttcaaagatctcaaaggtttattgaagcacgaatcctcaaaagtaaacaatttacaccaactatct 218  Q
    ||  |||| || |||||||||||||||||| ||| ||||| |   |||||||  |||||| ||||| |   | |||||||| | ||||||||||||||||    
T  9061319 aaccttacctccatcactagaataacataacggcctcaaaaagtccaaaggtgaattgaaacacgatttaaccaaagtaaaaagtttacaccaactatct 9061220  T
Q  219 ctaaatccata 229  Q
    ||| |||||||    
T  9061219 ctagatccata 9061209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 9364511 - 9364580
Alignment:
Q  20 attaggaattccttgaacacaagtaacttcttcacttttgagatcataccaaaacagcttcttacaatct 89  Q
    ||||||||||||| |||||| |||||| | |||||| |||||||| ||||||||||||||||||| ||||    
T  9364511 attaggaattcctggaacactagtaacgttttcactcttgagatcgtaccaaaacagcttcttacgatct 9364580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 17566241 - 17566149
Alignment:
Q  139 aataacataaaggcttcaaagatctcaaaggtttattgaagcacgaatcctcaaaagtaaacaatttacaccaactatctctaaatccatatt 231  Q
    |||||||||||||||||||| || |||||||| || |||| | | | ||  | || |||||||||||||||||| ||||||||||||||||||    
T  17566241 aataacataaaggcttcaaatatatcaaaggtatactgaaacgccactcgcccaaggtaaacaatttacaccaattatctctaaatccatatt 17566149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 231
Target Start/End: Original strand, 10347740 - 10347861
Alignment:
Q  110 ttccaacagaaatttacttctatcactagaataacataaaggcttcaaagatctcaaaggtttattgaagcacgaatcctcaaaagtaaacaatttacac 209  Q
    |||||||||||  ||||||| |||||||||||||||||  ||| ||||  || ||||||||  || ||| ||||| ||  | | |||||| | |||||||    
T  10347740 ttccaacagaaccttacttccatcactagaataacatatgggcctcaacaatttcaaaggtaaatcgaaacacgactcagccatagtaaaaagtttacac 10347839  T
Q  210 caactatctctaaatccatatt 231  Q
    |||||||||||| |||||||||    
T  10347840 caactatctctacatccatatt 10347861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 7115905 - 7115835
Alignment:
Q  19 aattaggaattccttgaacacaagtaacttcttcacttttgagatcataccaaaacagcttcttacaatct 89  Q
    ||||||||||||||| ||||||| |||||| ||| || || | ||||||||||| ||||||| ||||||||    
T  7115905 aattaggaattccttcaacacaactaacttgttcgctcttcaaatcataccaaaccagcttcctacaatct 7115835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 109 - 231
Target Start/End: Complemental strand, 8573693 - 8573571
Alignment:
Q  109 cttccaacagaaatttacttctatcactagaataacataaaggcttcaaagatctcaaaggtttattgaagcacgaatcctcaaaagtaaacaatttaca 208  Q
    ||||||||||||  ||||||| |||||||||||||| ||||||| || ||||| | ||| ||  | |||| ||||| |   | |||||||| | ||||||    
T  8573693 cttccaacagaaccttacttccatcactagaataacctaaaggcctcgaagatttaaaatgtggagtgaaacacgatttaacgaaagtaaaaagtttaca 8573594  T
Q  209 ccaactatctctaaatccatatt 231  Q
    ||||||||||||| | |||||||    
T  8573593 ccaactatctctagaaccatatt 8573571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 9284450 - 9284380
Alignment:
Q  19 aattaggaattccttgaacacaagtaacttcttcacttttgagatcataccaaaacagcttcttacaatct 89  Q
    ||||||||||||||| |||| || ||||||  ||||| || | ||||||||||| ||||||||||||||||    
T  9284450 aattaggaattccttcaacataaataacttgctcactcttcaaatcataccaaaccagcttcttacaatct 9284380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 168
Target Start/End: Original strand, 9291899 - 9291956
Alignment:
Q  111 tccaacagaaatttacttctatcactagaataacataaaggcttcaaagatctcaaag 168  Q
    ||||||||||  ||||||| ||| |||||||||||||||||| |||||||| ||||||    
T  9291899 tccaacagaaccttacttccatccctagaataacataaaggcctcaaagatttcaaag 9291956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 10335738 - 10335807
Alignment:
Q  19 aattaggaattccttgaacacaagtaacttcttcacttttgagatcataccaaaacagcttcttacaatc 88  Q
    ||||||||||||||| |||| || ||| || |||||| || | |||||||||||||| ||||||||||||    
T  10335738 aattaggaattccttcaacataactaatttgttcactcttcaaatcataccaaaacaacttcttacaatc 10335807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 231
Target Start/End: Original strand, 7611976 - 7612015
Alignment:
Q  192 aaagtaaacaatttacaccaactatctctaaatccatatt 231  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  7611976 aaagtaaacaatttacaccaactatcttttaatccatatt 7612015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 152
Target Start/End: Original strand, 9274475 - 9274518
Alignment:
Q  109 cttccaacagaaatttacttctatcactagaataacataaaggc 152  Q
    ||||||||||||  ||||||| ||||||||||||||||||||||    
T  9274475 cttccaacagaaccttacttccatcactagaataacataaaggc 9274518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 231
Target Start/End: Original strand, 9364665 - 9364704
Alignment:
Q  192 aaagtaaacaatttacaccaactatctctaaatccatatt 231  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  9364665 aaagtaaacaatttacaccaactatcttttaatccatatt 9364704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 8573787 - 8573725
Alignment:
Q  18 caattaggaattccttgaacacaagtaacttcttcacttttgagatcataccaaaacagcttc 80  Q
    |||||||||||||||| |||| || | |||| |||||| || | |||||||||||||||||||    
T  8573787 caattaggaattccttcaacataactgacttgttcactcttcaaatcataccaaaacagcttc 8573725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 9291804 - 9291865
Alignment:
Q  19 aattaggaattccttgaacacaagtaacttcttcacttttgagatcataccaaaacagcttc 80  Q
    ||||||||||||||| |||| || ||| || |||||| || | |||||||||||||||||||    
T  9291804 aattaggaattccttcaacataactaatttgttcactcttcaaatcataccaaaacagcttc 9291865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 231
Target Start/End: Complemental strand, 12019054 - 12018954
Alignment:
Q  131 atcactagaataacataaaggcttcaaagatctcaaaggtttattgaagcacgaatcctcaaaagtaaacaatttacaccaactatctctaaatccatat 230  Q
    |||||| ||||||| ||||||  ||||| |||| ||||||  |  ||| ||||| |||   |||||||| | ||||||||||||||||||| ||||||||    
T  12019054 atcactcgaataacctaaagggctcaaaaatctaaaaggtaaaacgaaacacgattccatcaaagtaaaaagtttacaccaactatctctacatccatat 12018955  T
Q  231 t 231  Q
    |    
T  12018954 t 12018954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 231
Target Start/End: Original strand, 39427495 - 39427719
Alignment:
Q  19 aattaggaattccttgaacacaagtaacttcttcacttttgagatcataccaaaacagcttctt---acaatctctatagagatcacc------ttttac 109  Q
    |||||||||||| | ||||| | |||||||  | ||||||||||| ||||||||||||||||||   |  ||| || | || ||||||      ||||||    
T  39427495 aattaggaattcttggaacataggtaactttataacttttgagataataccaaaacagcttcttcttaggatcactcttgaaatcacccctaaattttac 39427594  T
Q  110 ttccaacagaaatttacttctatcactagaataacataaaggcttcaaagatctcaaaggtttattgaagcacgaatcc---tcaaaagtaaacaattta 206  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||||  | ||||||  |||||| ||| | |||    |||||||||||||||||    
T  39427595 ttccaacagaactttacttctatcactggaataacataaaggcttcaaagacattaaaggtgaattgaaacaccattcccctacaaaagtaaacaattta 39427694  T
Q  207 caccaactatctctaaatccatatt 231  Q
    |||||||||| |||| |||||||||    
T  39427695 caccaactatatctatatccatatt 39427719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 109 - 231
Target Start/End: Original strand, 37462443 - 37462565
Alignment:
Q  109 cttccaacagaaatttacttctatcactagaataacataaaggcttcaaagatctcaaaggtttattgaagcacgaatcctcaaaagtaaacaatttaca 208  Q
    ||||||||| ||  ||||||| |||||||||||||||||||||| |||||||| ||||||||  | |||| ||||| |  || | |||| | | ||||||    
T  37462443 cttccaacaaaaccttacttccatcactagaataacataaaggcctcaaagatttcaaaggtgaagtgaaacacgatttatccacagtacaaagtttaca 37462542  T
Q  209 ccaactatctctaaatccatatt 231  Q
    ||||||||||||| |||||||||    
T  37462543 ccaactatctctagatccatatt 37462565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 107 - 231
Target Start/End: Original strand, 561174 - 561298
Alignment:
Q  107 tacttccaacagaaatttacttctatcactagaataacataaaggcttcaaagatctcaaaggtttattgaagcacgaatcctcaaaagtaaacaattta 206  Q
    |||||||||||||| |||||||||||||| |||||||| |||||||||| | | | | |||||| || ||||  ||   ||||| ||||||||||||  |    
T  561174 tacttccaacagaactttacttctatcaccagaataacctaaaggcttccatggtgtaaaaggtctactgaaaaacacttcctccaaagtaaacaataca 561273  T
Q  207 caccaactatctctaaatccatatt 231  Q
    |||||||||||||||||||||||||    
T  561274 caccaactatctctaaatccatatt 561298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 561066 - 561131
Alignment:
Q  20 attaggaattccttgaacacaagtaacttcttcacttttgagatcataccaaaacagcttcttaca 85  Q
    ||||||||||||| ||||||| ||| ||  || ||||||||||||||||||||||| ||| |||||    
T  561066 attaggaattcctggaacacaggtagctcttttacttttgagatcataccaaaacaactttttaca 561131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 107 - 231
Target Start/End: Original strand, 36224364 - 36224494
Alignment:
Q  107 tacttccaacagaaatttacttctatcactagaataacataaaggcttcaaagatctc------aaaggtttattgaagcacgaatcctcaaaagtaaac 200  Q
    |||||||||||||| ||||||||||||||| ||||||||| |||||||||||||| ||      ||||||  || |||  || | |||   |||||||||    
T  36224364 tacttccaacagaactttacttctatcactggaataacatgaaggcttcaaagatatcaatttaaaaggtgaatcgaaataccattcccacaaagtaaac 36224463  T
Q  201 aatttacaccaactatctctaaatccatatt 231  Q
    |||||||||||||||||||||||||||||||    
T  36224464 aatttacaccaactatctctaaatccatatt 36224494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 36224295 - 36224351
Alignment:
Q  32 ttgaacacaagtaacttcttcacttttgagatcataccaaaacagcttcttacaatc 88  Q
    ||||||||| |||||||| | ||||||||||| ||||||||||  ||||||| ||||    
T  36224295 ttgaacacaggtaacttcataacttttgagataataccaaaactccttcttagaatc 36224351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 2e-20; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 29423147 - 29423209
Alignment:
Q  19 aattaggaattccttgaacacaagtaacttcttcacttttgagatcataccaaaacagcttct 81  Q
    ||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||    
T  29423147 aattaggaattccttgaacacaactaacttgttcactcttgagatcataccaaaacagcttct 29423209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 29453564 - 29453494
Alignment:
Q  19 aattaggaattccttgaacacaagtaacttcttcacttttgagatcataccaaaacagcttcttacaatct 89  Q
    ||||||||||||||| ||||||| |||||| |||||| ||||||||||||||||||||||||| |||||||    
T  29453564 aattaggaattccttcaacacaactaacttgttcactcttgagatcataccaaaacagcttctcacaatct 29453494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 29468040 - 29467978
Alignment:
Q  19 aattaggaattccttgaacacaagtaacttcttcacttttgagatcataccaaaacagcttct 81  Q
    ||||||||||||||| |||| || |||| | |||||| ||||||||||||||||||| |||||    
T  29468040 aattaggaattccttcaacataattaacatgttcactcttgagatcataccaaaacaacttct 29467978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 29443578 - 29443519
Alignment:
Q  22 taggaattccttgaacacaagtaacttcttcacttttgagatcataccaaaacagcttct 81  Q
    |||||||||||| |||| || ||||   |||||| |||||||||||||||||||||||||    
T  29443578 taggaattccttcaacataactaacacattcactcttgagatcataccaaaacagcttct 29443519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 45243555 - 45243613
Alignment:
Q  22 taggaattccttgaacacaagtaacttcttcacttttgagatcataccaaaacagcttc 80  Q
    ||||||||||||||||| |||||| || |||||| ||||||||||||||||||||||||    
T  45243555 taggaattccttgaacataagtaagttgttcactgttgagatcataccaaaacagcttc 45243613  T

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Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 45230293 - 45230351
Alignment:
Q  22 taggaattccttgaacacaagtaacttcttcacttttgagatcataccaaaacagcttc 80  Q
    |||||||||||||||||  |||||||| |||||| |||| |||||||||||||||||||    
T  45230293 taggaattccttgaacatgagtaacttgttcactcttgaaatcataccaaaacagcttc 45230351  T

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Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 231
Target Start/End: Original strand, 45243656 - 45243775
Alignment:
Q  112 ccaacagaaatttacttctatcactagaataacataaaggcttcaaagatctcaaaggtttattgaagcacgaatcctcaaaagtaaacaatttacacca 211  Q
    ||||||||| |||||||| |||||| ||||||||||||||| ||||||||  |||| |   |||||| ||||| |   | |||||||| | |||||||||    
T  45243656 ccaacagaactttacttcgatcactcgaataacataaaggcctcaaagattccaaatgaaaattgaaacacgatttaaccaaagtaaaaagtttacacca 45243755  T
Q  212 actatctctaaatccatatt 231  Q
    | |||||||| | |||||||    
T  45243756 aatatctctagaaccatatt 45243775  T

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Target: chr8 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 41966968 - 41966911
Alignment:
Q  19 aattaggaattccttgaacacaagtaacttcttcacttttgagatcataccaaaacag 76  Q
    ||||||||||||||| |||| |||||| || |||||| || | |||||||||||||||    
T  41966968 aattaggaattccttcaacataagtaatttgttcactcttcaaatcataccaaaacag 41966911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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