View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8206A_low_160 (Length: 233)
Name: NF8206A_low_160
Description: NF8206A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8206A_low_160 |
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Alignment Details
Target: chr7 (Bit Score: 171; Significance: 6e-92; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 28 - 218
Target Start/End: Complemental strand, 35617929 - 35617739
Alignment:
| Q |
28 |
acatcagtagtactagtaccatgtttaagatcttcctgcacaatactcttctcctgcactttatattcgccttcggctgttacttcctcctccaatatcc |
127 |
Q |
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| T |
35617929 |
acatcagtagtactagtaccatgtttaagatcttccttcacaatactcttctcctgcactttatattcgccttcggctgttacttcctcctccattatcc |
35617830 |
T |
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| Q |
128 |
cagtatcgtaaactggaaacttgactgtttttgttgctgttgatttcacagtagcactttcatcatttttcttacatgcatccatattctt |
218 |
Q |
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|||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35617829 |
cagtatcgcaaaccggaaacttgactgcttttgttgctgttgatttcacagtagcactttcatcatttttcttacatgcatccatattctt |
35617739 |
T |
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