View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8206A_low_183 (Length: 226)
Name: NF8206A_low_183
Description: NF8206A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8206A_low_183 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 35448478 - 35448703
Alignment:
| Q |
1 |
tcagtactggttatgattaatccaaaataagctttgaacattttatttaaacgcgcacattgacccacagaaacacaagagagaggacataccagaaaac |
100 |
Q |
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| T |
35448478 |
tcagtactggttatgattaatccaaactaagctttgaacattttatttaaacatgcacattgacccacagaaacacaagagagaggacataccagaaaac |
35448577 |
T |
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| Q |
101 |
agagaaacaagatccggaaagctagaacaaatgtttagaaaatccataactgcctcattgtcagaatctgagttggactcgacaccagagattggcatag |
200 |
Q |
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|||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
35448578 |
agagaaacaagatccggaaagctagaacaagtgtttagaaaatccataactgcttcattgtcagaatctgagttggactcgataccagagattggcatag |
35448677 |
T |
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| Q |
201 |
ctgaagcatcgcggacattttagccg |
226 |
Q |
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|||||||||||||||||||| ||||| |
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| T |
35448678 |
ctgaagcatcgcggacatttgagccg |
35448703 |
T |
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