View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8206A_low_190 (Length: 222)
Name: NF8206A_low_190
Description: NF8206A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8206A_low_190 |
 | |
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| [»] chr8 (3 HSPs) |
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| [»] chr3 (5 HSPs) |
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| [»] scaffold0319 (1 HSPs) |
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| [»] scaffold0022 (1 HSPs) |
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| [»] scaffold0130 (1 HSPs) |
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| [»] scaffold0016 (2 HSPs) |
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| [»] scaffold0040 (1 HSPs) |
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| [»] scaffold0241 (1 HSPs) |
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| [»] scaffold0108 (1 HSPs) |
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| [»] scaffold0001 (1 HSPs) |
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| [»] chr1 (2 HSPs) |
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| [»] chr5 (1 HSPs) |
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| [»] scaffold0282 (1 HSPs) |
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| [»] scaffold0005 (1 HSPs) |
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| [»] scaffold0064 (1 HSPs) |
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| [»] scaffold0656 (1 HSPs) |
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| [»] scaffold0026 (1 HSPs) |
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| [»] scaffold0023 (2 HSPs) |
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| [»] scaffold0019 (1 HSPs) |
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| [»] scaffold0107 (1 HSPs) |
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| [»] scaffold0013 (4 HSPs) |
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| [»] scaffold0046 (1 HSPs) |
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| [»] scaffold0362 (1 HSPs) |
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| [»] scaffold0053 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 145; Significance: 2e-76; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 50 - 222
Target Start/End: Original strand, 1735317 - 1735489
Alignment:
| Q |
50 |
cagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaaagaagatgaggaga |
149 |
Q |
| |
|
||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |
|
|
| T |
1735317 |
cagaaagctgtgttcgagatggttaagaagccagcaacagaacgaatttcacccccattgtcaattctgaagaaagatcattcaaaagaagacgaggaga |
1735416 |
T |
|
| Q |
150 |
tgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcctgtgga |
222 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| |
|
|
| T |
1735417 |
tgacttcaaatttcacggaatctgacccaagtcttgacatagtctgtaatgtggtttccatcttgcctgtgga |
1735489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 17 - 222
Target Start/End: Complemental strand, 17423062 - 17422857
Alignment:
| Q |
17 |
gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc |
116 |
Q |
| |
|
|||||||||||| |||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |
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|
| T |
17423062 |
gacatcaccaatgttgacaaaacggaggataagcagaaagaggtgttcgaaatggttaagaaaccagcaacagagagaatctcacccccattgtcaatct |
17422963 |
T |
|
| Q |
117 |
tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcc |
216 |
Q |
| |
|
|||||||||||||| ||||||| ||||||||||||||||| |||||||||| ||||||||| || || ||||||||||||||||||||||| ||| | || |
|
|
| T |
17422962 |
tgaagaaagatcatcccaaagaggatgaggagatgacttcgaatttcacgggatctgacccgagcctcgacatagtttgcaatgtggtttctatcctacc |
17422863 |
T |
|
| Q |
217 |
tgtgga |
222 |
Q |
| |
|
|||||| |
|
|
| T |
17422862 |
tgtgga |
17422857 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 17 - 220
Target Start/End: Complemental strand, 22348972 - 22348769
Alignment:
| Q |
17 |
gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc |
116 |
Q |
| |
|
|||||||||||| ||||||||| | ||||||||||||| |||||||||||||||||| |||||||||| |||| |||| |||||||||||||||||| |
|
|
| T |
22348972 |
gacatcaccaatgttgacaaagggaaaggcaagcagaaagttgtgttcgaaatggttaaaaaaccagcaatagagagaatctcacccccattgtcaattt |
22348873 |
T |
|
| Q |
117 |
tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcc |
216 |
Q |
| |
|
| |||||||||||| ||||||| ||||| || |||||||||||||||| | ||||||||| |||||||| || || |||||||||||||| ||| | || |
|
|
| T |
22348872 |
taaagaaagatcatcccaaagaggatgaagaaatgacttcaaatttcattggatctgaccccagtcttgatatcgtatgcaatgtggtttcgatcctacc |
22348773 |
T |
|
| Q |
217 |
tgtg |
220 |
Q |
| |
|
|||| |
|
|
| T |
22348772 |
tgtg |
22348769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 142; Significance: 1e-74; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 17 - 222
Target Start/End: Complemental strand, 14693434 - 14693229
Alignment:
| Q |
17 |
gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc |
116 |
Q |
| |
|
||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
14693434 |
gacatcaccaatattgacaaaacggaggacaagcagaaagccgtgttcgaaatggttaaaaaaccagcaacagagagaatttcacccccattgtcaatct |
14693335 |
T |
|
| Q |
117 |
tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcc |
216 |
Q |
| |
|
|||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| |
|
|
| T |
14693334 |
tgaagaaagaccattccaaagaggataaggagatgacttcaaatttcacggaatctgacccaaacctcgacatagtttgcaatgtggtttctatcttgcc |
14693235 |
T |
|
| Q |
217 |
tgtgga |
222 |
Q |
| |
|
|||||| |
|
|
| T |
14693234 |
tgtgga |
14693229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 41 - 222
Target Start/End: Original strand, 10782167 - 10782348
Alignment:
| Q |
41 |
gagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaaagaag |
140 |
Q |
| |
|
|||| |||||||||||||||||| || ||||||||||| |||||||||||||||||||| ||||||||||| ||||||| |||||||||| | ||||||| |
|
|
| T |
10782167 |
gaggacaagcagaaagctgtgtttgagatggttaagaagccagcaacagagcgaatttcgcccccattgtcgattctgatgaaagatcatccaaaagaag |
10782266 |
T |
|
| Q |
141 |
atgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcctgtgga |
222 |
Q |
| |
|
||||||| |||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |
|
|
| T |
10782267 |
atgaggaaatgacttcgaatttcacagaatctgacccaagtcttgacatagtttgtaatgtggtttccattttgcctgtgga |
10782348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 20 - 207
Target Start/End: Original strand, 10150777 - 10150964
Alignment:
| Q |
20 |
atcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctga |
119 |
Q |
| |
|
||||||||| ||||||||| ||||||||||| |||| |||||||||||||||||| ||||||| |||||| |||| |||||||||||||||||| ||| |
|
|
| T |
10150777 |
atcaccaatgttgacaaaggagagggcaagcgaaaagatgtgttcgaaatggttaaaaaaccagtcacagagagaatctcacccccattgtcaattttga |
10150876 |
T |
|
| Q |
120 |
agaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttc |
207 |
Q |
| |
|
||||||||||| ||||||| ||||| || ||||||||||||||||| | ||||||||| |||||||||||||| |||||||||||||| |
|
|
| T |
10150877 |
agaaagatcatcccaaagaggatgaagaaatgacttcaaatttcactggatctgaccccagtcttgacatagtatgcaatgtggtttc |
10150964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 29 - 218
Target Start/End: Complemental strand, 7402182 - 7401993
Alignment:
| Q |
29 |
attgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatc |
128 |
Q |
| |
|
||||||||| | |||| || ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||| || |
|
|
| T |
7402182 |
attgacaaaatggaggataaacagaaagctgtgttcgaaatggttaagaaggcagcaacagaaagaatttcacccccattgtcaattttgaagaagtatt |
7402083 |
T |
|
| Q |
129 |
attccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcctg |
218 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||| ||| |||||| |
|
|
| T |
7402082 |
gttccaaagaggatgaggagatgacttcaaatttcacggaatgtgacccgagtctcgacatagtttgcaatgtggtttcaatcctgcctg |
7401993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 47 - 207
Target Start/End: Complemental strand, 13307054 - 13306894
Alignment:
| Q |
47 |
aagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaaagaagatgagg |
146 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||| ||||||| ||||| | |
|
|
| T |
13307054 |
aagcagaaaactgtgttcgaaatggttaagaaaccagcaacagagagaatctcacccccattgtcaattttgaagaaagatcatcccaaagaggatgaag |
13306955 |
T |
|
| Q |
147 |
agatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttc |
207 |
Q |
| |
|
| |||||||| |||||||||| ||||||||| ||||| || |||||||||||||||||||| |
|
|
| T |
13306954 |
atatgacttcgaatttcacgggatctgaccctagtctcgatatagtttgcaatgtggtttc |
13306894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 138; Significance: 3e-72; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 17 - 182
Target Start/End: Complemental strand, 18133743 - 18133578
Alignment:
| Q |
17 |
gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc |
116 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18133743 |
gacatcaccaatattgacaaaagggagggcaagcaaaaagttgtgttcgagatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc |
18133644 |
T |
|
| Q |
117 |
tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtc |
182 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18133643 |
tgaagaaagatcgttccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtc |
18133578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 47 - 222
Target Start/End: Complemental strand, 14342834 - 14342659
Alignment:
| Q |
47 |
aagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaaagaagatgagg |
146 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||| ||||||||| ||||||| |
|
|
| T |
14342834 |
aagcagaaagctgtgttcgaaatggttaagaaaccagcaacaaaaagaatttcacccccattgtcaattttgaagaaagattgttccaaagaggatgagg |
14342735 |
T |
|
| Q |
147 |
agatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcctgtgga |
222 |
Q |
| |
|
||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||| ||| |||||||||| |
|
|
| T |
14342734 |
agatgacttcaaatttcacggaatctgacccgagcctcgacatagtttgcaatgtggtttcaatcctgcctgtgga |
14342659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 22 - 207
Target Start/End: Complemental strand, 18171837 - 18171652
Alignment:
| Q |
22 |
caccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaag |
121 |
Q |
| |
|
||||||| ||||||||| |||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||| ||||| |
|
|
| T |
18171837 |
caccaatgttgacaaaggagagggtaagcagaaagctgtgttcgaaatggttaaaaaaccagcaacagaaagaatttcgcccccattgtcaatcttgaag |
18171738 |
T |
|
| Q |
122 |
aaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttc |
207 |
Q |
| |
|
||||||||| |||| || ||||| || |||||||| |||||||| | ||||||||| ||||| |||||||| | |||||||||||| |
|
|
| T |
18171737 |
aaagatcatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtacaatgtggtttc |
18171652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0319 (Bit Score: 118; Significance: 2e-60; HSPs: 1)
Name: scaffold0319
Description:
Target: scaffold0319; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 17 - 222
Target Start/End: Original strand, 9626 - 9831
Alignment:
| Q |
17 |
gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc |
116 |
Q |
| |
|
|||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||| || |||||||||||| |||| |||||||||||||||||| |
|
|
| T |
9626 |
gacatcaccaatgttgacaaaggagagggtaagcagaaagctgtgttcgaaatggttaaaaagccagcaacagagagaatctcacccccattgtcaattt |
9725 |
T |
|
| Q |
117 |
tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcc |
216 |
Q |
| |
|
| |||||||| ||| ||||||| ||||| || ||||||||||||||||| | ||||||||| ||||| |||||||| |||||||||||||| ||| | || |
|
|
| T |
9726 |
taaagaaagaacatcccaaagaggatgaagaaatgacttcaaatttcactggatctgaccctagtctcgacatagtatgcaatgtggtttctatcctacc |
9825 |
T |
|
| Q |
217 |
tgtgga |
222 |
Q |
| |
|
|||||| |
|
|
| T |
9826 |
tgtgga |
9831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0022 (Bit Score: 115; Significance: 1e-58; HSPs: 1)
Name: scaffold0022
Description:
Target: scaffold0022; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 17 - 207
Target Start/End: Original strand, 11347 - 11537
Alignment:
| Q |
17 |
gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc |
116 |
Q |
| |
|
|||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||| || ||||||||||||||| |
|
|
| T |
11347 |
gacatcaccaatgttgacaaaacagagggtaagcagaaagctgtgttcgaaatggttaaaaaaccagcaacagagagaatctcgcccccattgtcaattt |
11446 |
T |
|
| Q |
117 |
tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttc |
207 |
Q |
| |
|
| |||||||||||| ||||||| ||||| || ||||||||||||||||| ||||||||||| ||||| ||||||| |||||||||||||| |
|
|
| T |
11447 |
taaagaaagatcatcccaaagaggatgaagaaatgacttcaaatttcactgaatctgaccctagtctcaacatagtatgcaatgtggtttc |
11537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 115; Significance: 1e-58; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 17 - 207
Target Start/End: Complemental strand, 23200837 - 23200647
Alignment:
| Q |
17 |
gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc |
116 |
Q |
| |
|
|||||||||||| |||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||| |
|
|
| T |
23200837 |
gacatcaccaatgttgacaaaacagagggtaagcagaaggctgtgttcgaaatggttaagaaaccagcaacagagagaatctcgcccccattgtcaattt |
23200738 |
T |
|
| Q |
117 |
tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttc |
207 |
Q |
| |
|
|||||||||||||| ||||||| ||||| || |||||||| |||||||||| ||||||||| ||||| || ||||| |||||||||||||| |
|
|
| T |
23200737 |
tgaagaaagatcatcccaaagaggatgaagaaatgacttcgaatttcacgggatctgaccctagtctcgatatagtgtgcaatgtggtttc |
23200647 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 17 - 207
Target Start/End: Original strand, 22638304 - 22638494
Alignment:
| Q |
17 |
gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc |
116 |
Q |
| |
|
||||||||| || |||| ||| |||||| |||||||| |||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||| |
|
|
| T |
22638304 |
gacatcaccgatgttgataaaacagagggtaagcagaaggctgtgttcgaaatggttaagaaaccagcaacagagagaatctcgcccccattgtcaattt |
22638403 |
T |
|
| Q |
117 |
tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttc |
207 |
Q |
| |
|
|||||||||||||| ||||||| ||||| || |||||||| |||||||| | ||||||||| ||||| |||||||| |||||||||||||| |
|
|
| T |
22638404 |
tgaagaaagatcatcccaaagaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttc |
22638494 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 17 - 207
Target Start/End: Complemental strand, 23626466 - 23626276
Alignment:
| Q |
17 |
gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc |
116 |
Q |
| |
|
|||||||||||| |||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||| |||| || |||||||||||||| |
|
|
| T |
23626466 |
gacatcaccaatgttgacaaaacagagggtaagcagaaagctgtgttcaaaatggttaagaaaccagcaacagagagaatctcgcccccattgtcaatat |
23626367 |
T |
|
| Q |
117 |
tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttc |
207 |
Q |
| |
|
|||| ||||||||| |||| || |||| || |||||||| |||||||| | ||||||||| ||||| |||||||| |||||||||||||| |
|
|
| T |
23626366 |
tgaaaaaagatcatcccaaggaggatgtagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtgtgcaatgtggtttc |
23626276 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 17 - 204
Target Start/End: Original strand, 24911884 - 24912070
Alignment:
| Q |
17 |
gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc |
116 |
Q |
| |
|
|||||||||||||||||||||| | || ||||||| |||||| |||||||||||||| |||||||||||| || ||||||||||||| |||||||| |
|
|
| T |
24911884 |
gacatcaccaatattgacaaagggaaaggaaagcagagagctgttttcgaaatggttaaaaaaccagcaacaaagagaatttcaccccc-ttgtcaatct |
24911982 |
T |
|
| Q |
117 |
tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggt |
204 |
Q |
| |
|
| ||||| || ||| ||||||| ||||| || ||||||||||||||||| | ||||||||| ||||| |||||||| ||||||||||| |
|
|
| T |
24911983 |
taaagaaggaccatcccaaagaggatgaagaaatgacttcaaatttcactggatctgaccccagtctcgacatagtatgcaatgtggt |
24912070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 111; Significance: 3e-56; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 17 - 207
Target Start/End: Complemental strand, 13289575 - 13289385
Alignment:
| Q |
17 |
gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc |
116 |
Q |
| |
|
|||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||| || |||||||||||| |||| || ||||||||||||||| |
|
|
| T |
13289575 |
gacatcaccaatgttgacaaaggagagggtaagcagaaagctgtgttcgaaatggttaaaaagccagcaacagagagaatctcgcccccattgtcaattt |
13289476 |
T |
|
| Q |
117 |
tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttc |
207 |
Q |
| |
|
| |||||||||||| ||||||| ||||| || |||||||| |||||||| | ||||||||| ||||| |||||||| |||||||||||||| |
|
|
| T |
13289475 |
taaagaaagatcatcccaaagaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtatgcaatgtggtttc |
13289385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 17 - 222
Target Start/End: Complemental strand, 14772775 - 14772570
Alignment:
| Q |
17 |
gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc |
116 |
Q |
| |
|
|||||||||||| ||||||||| | || || |||| |||||| |||||||||||||| ||||||||||||||| |||| ||||||||||||||||||| |
|
|
| T |
14772775 |
gacatcaccaatgttgacaaagggaaaggaaaacagagagctgtattcgaaatggttaaaaaaccagcaacagagagaatctcacccccattgtcaattc |
14772676 |
T |
|
| Q |
117 |
tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcc |
216 |
Q |
| |
|
| |||||||||||| ||||||| ||||| || ||||||||||||||||| | ||||||||| ||||| || ||||| ||||||||||| || ||| | || |
|
|
| T |
14772675 |
taaagaaagatcatcccaaagaggatgaagaaatgacttcaaatttcactggatctgaccccagtctcgatatagtatgcaatgtggtctcgatcctacc |
14772576 |
T |
|
| Q |
217 |
tgtgga |
222 |
Q |
| |
|
|||||| |
|
|
| T |
14772575 |
tgtgga |
14772570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 109; Significance: 5e-55; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 17 - 213
Target Start/End: Original strand, 23435091 - 23435287
Alignment:
| Q |
17 |
gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc |
116 |
Q |
| |
|
|||||||||||| |||||||| |||||| |||||||| | ||||||||||||||||||||||||||||| |||| |||| || ||||||||||||||| |
|
|
| T |
23435091 |
gacatcaccaatgttgacaaaacagagggtaagcagaaggttgtgttcgaaatggttaagaaaccagcaatagagagaatctcgcccccattgtcaattt |
23435190 |
T |
|
| Q |
117 |
tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatctt |
213 |
Q |
| |
|
|||||||||||||| |||| || ||||| || |||||||| |||||||||| ||||||||| ||||| |||||||| |||||||||||||| ||||| |
|
|
| T |
23435191 |
tgaagaaagatcatcccaaggaggatgaagaaatgacttcgaatttcacgggatctgaccctagtctcgacatagtgtgcaatgtggtttctatctt |
23435287 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 17 - 222
Target Start/End: Complemental strand, 19035386 - 19035181
Alignment:
| Q |
17 |
gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc |
116 |
Q |
| |
|
|||||||||||| ||||||||| |||||||||||| |||||| |||||||||| ||||| ||||||||||||||| |||| ||| | |||||||||||| |
|
|
| T |
19035386 |
gacatcaccaatgttgacaaaggagagggcaagcaaaaagctatgttcgaaatagttaaaaaaccagcaacagagagaatctcatctccattgtcaattt |
19035287 |
T |
|
| Q |
117 |
tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcc |
216 |
Q |
| |
|
|||||||| || || ||||| | ||||| || |||||||| |||||||| | ||||||||| |||||||| || | ||||||||||| || ||| | || |
|
|
| T |
19035286 |
tgaagaaaaataatcccaaaaaggatgaagaaatgacttcgaatttcactggatctgaccccagtcttgatattatatgcaatgtggtctcgatcctacc |
19035187 |
T |
|
| Q |
217 |
tgtgga |
222 |
Q |
| |
|
|||||| |
|
|
| T |
19035186 |
tgtgga |
19035181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0130 (Bit Score: 107; Significance: 8e-54; HSPs: 1)
Name: scaffold0130
Description:
Target: scaffold0130; HSP #1
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 17 - 207
Target Start/End: Original strand, 43131 - 43321
Alignment:
| Q |
17 |
gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc |
116 |
Q |
| |
|
|||||||||||| |||| ||| |||||| |||||||||||||||||| |||||||||||||||||||||||||| |||| || ||||||||||||||| |
|
|
| T |
43131 |
gacatcaccaatgttgataaaacagagggtaagcagaaagctgtgttcaaaatggttaagaaaccagcaacagagagaatctcgcccccattgtcaattt |
43230 |
T |
|
| Q |
117 |
tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttc |
207 |
Q |
| |
|
|||||||||||||| |||| || ||||| || ||||||| |||||||||| ||||||||| ||||| |||||||| |||||||||||||| |
|
|
| T |
43231 |
tgaagaaagatcatcccaaggaggatgaagaactgacttcgaatttcacgggatctgaccctagtctcgacatagtgtgcaatgtggtttc |
43321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0016 (Bit Score: 103; Significance: 2e-51; HSPs: 2)
Name: scaffold0016
Description:
Target: scaffold0016; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 17 - 207
Target Start/End: Complemental strand, 126767 - 126577
Alignment:
| Q |
17 |
gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc |
116 |
Q |
| |
|
||||||||| || |||| ||| |||||| |||||||| |||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||| |
|
|
| T |
126767 |
gacatcaccgatgttgataaaacagagggtaagcagaaggctgtgttcgaaatggttaagaaaccagcaacagagagaatctcgcccccattgtcaattt |
126668 |
T |
|
| Q |
117 |
tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttc |
207 |
Q |
| |
|
|||||||||||||| ||||||| ||||| || |||||||| |||||||| | ||||||||| ||||| || ||||| |||||||||||||| |
|
|
| T |
126667 |
tgaagaaagatcatcccaaagaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgatatagtgtgcaatgtggtttc |
126577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0016; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 204
Target Start/End: Complemental strand, 179447 - 179311
Alignment:
| Q |
68 |
atggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacgg |
167 |
Q |
| |
|
|||||||| ||| |||| ||||| |||| || || || ||||||||| |||||||||| ||| | ||||| ||||| || ||||| || |||||| | |
|
|
| T |
179447 |
atggttaaaaaatcagccacagaaagaatctcccctcctttgtcaattttgaagaaagaccatcctaaagaggatgaagaaatgacgtcgaatttctcca |
179348 |
T |
|
| Q |
168 |
aatctgacccaagtcttgacatagtttgcaatgtggt |
204 |
Q |
| |
|
| ||||||||||| | || ||||| ||||||||||| |
|
|
| T |
179347 |
agtctgacccaagcttcgatatagtgtgcaatgtggt |
179311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0040 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0040
Description:
Target: scaffold0040; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 17 - 207
Target Start/End: Original strand, 29608 - 29798
Alignment:
| Q |
17 |
gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc |
116 |
Q |
| |
|
||||||||||||||||||||| | |||||||||| |||| |||||||||||||||||| |||||||| | |||| |||| |||||||| ||||||||| |
|
|
| T |
29608 |
gacatcaccaatattgacaaaagaaagggcaagcaaaaagatgtgttcgaaatggttaaaaaaccagccatagagagaatctcacccccgttgtcaattt |
29707 |
T |
|
| Q |
117 |
tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttc |
207 |
Q |
| |
|
|||||||||||||| ||||||| ||||| || ||||| ||| ||||||| | ||||||||| || || |||||||| |||||||||||||| |
|
|
| T |
29708 |
tgaagaaagatcatcccaaagaggatgaagaaatgacctcagatttcaccggatctgaccccagcctagacatagtatgcaatgtggtttc |
29798 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0241 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0241
Description:
Target: scaffold0241; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 17 - 222
Target Start/End: Original strand, 11460 - 11665
Alignment:
| Q |
17 |
gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc |
116 |
Q |
| |
|
|||||||||||| | ||||||| | || || ||||||||||| |||||||||||||| ||||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
11460 |
gacatcaccaatgtagacaaagggaaaggaaaacagaaagctgtattcgaaatggttaaaaaaccagcaacagagagaatctcacccccattgtcaatta |
11559 |
T |
|
| Q |
117 |
tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcc |
216 |
Q |
| |
|
| |||||||||||| ||||||| ||||| || ||||||||||||||||| | ||||||||| |||||||| || || ||||||||||| || ||| | || |
|
|
| T |
11560 |
taaagaaagatcatcccaaagaggatgaagaaatgacttcaaatttcactggatctgaccccagtcttgatatcgtatgcaatgtggtctcaatcctacc |
11659 |
T |
|
| Q |
217 |
tgtgga |
222 |
Q |
| |
|
|||||| |
|
|
| T |
11660 |
tgtgga |
11665 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0108 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0108
Description:
Target: scaffold0108; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 17 - 222
Target Start/End: Original strand, 26194 - 26399
Alignment:
| Q |
17 |
gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc |
116 |
Q |
| |
|
|||||||||||| ||||||||| ||||| || |||||||||||||||||||||||||| || |||||||||||| |||| |||||||||||||||||| |
|
|
| T |
26194 |
gacatcaccaatgttgacaaaggagaggataaacagaaagctgtgttcgaaatggttaaaaagccagcaacagagagaatctcacccccattgtcaattt |
26293 |
T |
|
| Q |
117 |
tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcc |
216 |
Q |
| |
|
|||||||||| | ||| || ||||| ||||||||||| |||||||| | ||||||||| ||||| |||||||| ||||| ||||| |||||| | || |
|
|
| T |
26294 |
tgaagaaagactctctcaaggaggatgaagagatgacttcgaatttcactggatctgaccctagtctcgacatagtatgcaacgtggtgtccatcctacc |
26393 |
T |
|
| Q |
217 |
tgtgga |
222 |
Q |
| |
|
|||||| |
|
|
| T |
26394 |
tgtgga |
26399 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0001
Description:
Target: scaffold0001; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 17 - 222
Target Start/End: Complemental strand, 126968 - 126763
Alignment:
| Q |
17 |
gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc |
116 |
Q |
| |
|
|||||| ||||| ||||||||| |||| ||||||||||| ||||||||||||||||| |||||| |||||||| |||| ||||||||||||| |||| |
|
|
| T |
126968 |
gacatctccaatgttgacaaagggaagggaaagcagaaagcggtgttcgaaatggttaaaaaaccaacaacagagagaatctcacccccattgtgaattt |
126869 |
T |
|
| Q |
117 |
tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcc |
216 |
Q |
| |
|
| |||||||||||| |||| || ||||| || ||||||||||||||||||| ||||||||| |||||||| || || ||||||||||| || ||| | || |
|
|
| T |
126868 |
taaagaaagatcatcccaatgaggatgaagaaatgacttcaaatttcacgggatctgaccccagtcttgatatcgtatgcaatgtggtctcgatcctacc |
126769 |
T |
|
| Q |
217 |
tgtgga |
222 |
Q |
| |
|
|||||| |
|
|
| T |
126768 |
tgtgga |
126763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 94; Significance: 5e-46; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 17 - 222
Target Start/End: Complemental strand, 22806046 - 22805841
Alignment:
| Q |
17 |
gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc |
116 |
Q |
| |
|
|||||||||||| ||||||||| | || ||||||| |||||| || ||||||||||| ||||||||||||||| |||| ||||||||||||||||||| |
|
|
| T |
22806046 |
gacatcaccaatgttgacaaagggaaaggaaagcagagagctgtatttgaaatggttaaaaaaccagcaacagagagaatctcacccccattgtcaattc |
22805947 |
T |
|
| Q |
117 |
tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcc |
216 |
Q |
| |
|
| |||||||||||| ||||||| ||||| || ||||||||||||||||| | ||||||||| | ||| || ||||| ||||||||||| || ||| | || |
|
|
| T |
22805946 |
taaagaaagatcatcccaaagaggatgaagaaatgacttcaaatttcactggatctgaccccaatctcgatatagtatgcaatgtggtctcaatcctacc |
22805847 |
T |
|
| Q |
217 |
tgtgga |
222 |
Q |
| |
|
|||||| |
|
|
| T |
22805846 |
tgtgga |
22805841 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 17 - 134
Target Start/End: Complemental strand, 41380531 - 41380414
Alignment:
| Q |
17 |
gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc |
116 |
Q |
| |
|
|||| |||||| |||||||| | |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
41380531 |
gacaccaccaacattgacaagatggagggcaagcagaaagctgtgttcgagatggttaagaagccagcaacagagcgaatttcacccccattgtcaattt |
41380432 |
T |
|
| Q |
117 |
tgaagaaagatcattcca |
134 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
41380431 |
tgaagaaagatcattcca |
41380414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 17 - 222
Target Start/End: Original strand, 21510976 - 21511181
Alignment:
| Q |
17 |
gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc |
116 |
Q |
| |
|
|||||| ||||| ||||||||| | || ||||||||||| ||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
21510976 |
gacatctccaatgttgacaaagggaaaggaaagcagaaagcggtgttcgaaatggttaaaaaaccagcaacagagagaatctcacccccattgtcaattt |
21511075 |
T |
|
| Q |
117 |
tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcc |
216 |
Q |
| |
|
| |||||||||||| |||| || ||||| || ||||||||||||||||| | ||||||||| |||||||| || | ||||||||||| || ||||| | |
|
|
| T |
21511076 |
taaagaaagatcatcccaaggaggatgaagaaatgacttcaaatttcactggatctgaccccagtcttgatatcatatgcaatgtggtctcgatcttact |
21511175 |
T |
|
| Q |
217 |
tgtgga |
222 |
Q |
| |
|
|||||| |
|
|
| T |
21511176 |
tgtgga |
21511181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0282 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0282
Description:
Target: scaffold0282; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 204
Target Start/End: Complemental strand, 5746 - 5559
Alignment:
| Q |
17 |
gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc |
116 |
Q |
| |
|
|||||||||||| ||||||||| | || ||||||| || ||| || ||||||||| | ||||||||||||||| |||| ||||||||||||||||||| |
|
|
| T |
5746 |
gacatcaccaatgttgacaaagggaaaggaaagcagagagttgtatttgaaatggtttaaaaaccagcaacagagagaatctcacccccattgtcaattc |
5647 |
T |
|
| Q |
117 |
tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggt |
204 |
Q |
| |
|
| |||||||||||| ||||||| ||||| || ||||||||||||||||| | ||||||||| ||||| || ||||| ||||||||||| |
|
|
| T |
5646 |
taaagaaagatcatcccaaagaggatgaagaaatgacttcaaatttcactggatctgaccccagtctcgatatagtatgcaatgtggt |
5559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0005 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0005
Description:
Target: scaffold0005; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 17 - 222
Target Start/End: Original strand, 66955 - 67160
Alignment:
| Q |
17 |
gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc |
116 |
Q |
| |
|
|||||||||||| ||||||||| | || || |||| || ||| || ||||||||| | ||||||||||||||| |||| ||||||||||||||||||| |
|
|
| T |
66955 |
gacatcaccaatgttgacaaagggaaaggaaatcagagagttgtatttgaaatggtttaaaaaccagcaacagagagaatctcacccccattgtcaattc |
67054 |
T |
|
| Q |
117 |
tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcc |
216 |
Q |
| |
|
| |||||||||||| ||||||| ||||| || ||||||||||||||||| | ||||||||| ||||| || ||||| ||||||||||| || ||| | || |
|
|
| T |
67055 |
taaagaaagatcatcccaaagaggatgaagaaatgacttcaaatttcactggatctgaccccagtctcgatatagtatgcaatgtggtctcaatcctacc |
67154 |
T |
|
| Q |
217 |
tgtgga |
222 |
Q |
| |
|
|||||| |
|
|
| T |
67155 |
tgtgga |
67160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0064 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0064
Description:
Target: scaffold0064; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 20 - 222
Target Start/End: Complemental strand, 37798 - 37596
Alignment:
| Q |
20 |
atcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctga |
119 |
Q |
| |
|
||||||||| ||| ||||| ||||| || |||||||||||||||||||||||||| || ||||||||| || ||||||||||||||||||||||| ||| |
|
|
| T |
37798 |
atcaccaattttgtcaaaggagaggttaaacagaaagctgtgttcgaaatggttaaaaagccagcaacatagagaatttcacccccattgtcaattttga |
37699 |
T |
|
| Q |
120 |
agaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcctgt |
219 |
Q |
| |
|
||||||| | |||| || ||||| || |||||||| |||||||| | ||||||||| ||||| |||||||| || || ||||| || ||| | ||||| |
|
|
| T |
37698 |
agaaagactttcccaaggaggatgaagatatgacttcgaatttcactggatctgaccctagtctcgacatagtatgtaacgtggtgtctatcctacctgt |
37599 |
T |
|
| Q |
220 |
gga |
222 |
Q |
| |
|
||| |
|
|
| T |
37598 |
gga |
37596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0656 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0656
Description:
Target: scaffold0656; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 204
Target Start/End: Original strand, 5028 - 5214
Alignment:
| Q |
17 |
gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc |
116 |
Q |
| |
|
|||||||||||||||||||||| | |||| ||||| | |||||| |||||||||||||| || |||||||||||| |||| |||||||| |||||||| |
|
|
| T |
5028 |
gacatcaccaatattgacaaaggaaaggg-aagcaaatagctgttttcgaaatggttaaaaagccagcaacagagagaatctcaccccccttgtcaatct |
5126 |
T |
|
| Q |
117 |
tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggt |
204 |
Q |
| |
|
| |||||||| ||| |||| || ||||| || |||||||| |||||||| | |||||||| ||||| |||||||| ||||||||||| |
|
|
| T |
5127 |
taaagaaagaccatcccaaggaggatgaagaaatgacttcgaatttcactggatctgacctcagtctcgacatagtatgcaatgtggt |
5214 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0026 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0026
Description:
Target: scaffold0026; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 207
Target Start/End: Complemental strand, 139181 - 138991
Alignment:
| Q |
17 |
gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc |
116 |
Q |
| |
|
|||||||||||| ||||||||| | || ||||||| |||||| |||||||||||||| |||||||||||| || | || ||||| || |||||||| |
|
|
| T |
139181 |
gacatcaccaatgttgacaaagggaaaggaaagcagagagctgtattcgaaatggttaaaaaaccagcaacaaagaggatctcacctcccttgtcaatct |
139082 |
T |
|
| Q |
117 |
tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttc |
207 |
Q |
| |
|
| |||||||| ||| ||||||| ||||| || |||||||| |||||||| | |||||||| ||||| |||||||| |||||||||||||| |
|
|
| T |
139081 |
taaagaaagaccatcccaaagaggatgaagaaatgacttcgaatttcactgggtctgaccctagtctcgacatagtatgcaatgtggtttc |
138991 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023 (Bit Score: 67; Significance: 6e-30; HSPs: 2)
Name: scaffold0023
Description:
Target: scaffold0023; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 17 - 155
Target Start/End: Original strand, 65238 - 65376
Alignment:
| Q |
17 |
gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc |
116 |
Q |
| |
|
|||||||||||| ||||||||| | | |||||||||| |||||||||||||||||| ||||||||||||||| |||| | |||||||||||||||| |
|
|
| T |
65238 |
gacatcaccaatgttgacaaagggaaagtaaagcagaaagttgtgttcgaaatggttaaaaaaccagcaacagagagaatctaacccccattgtcaattt |
65337 |
T |
|
| Q |
117 |
tgaagaaagatcattccaaagaagatgaggagatgactt |
155 |
Q |
| |
|
| |||||||||||| ||||||| ||||| || ||||||| |
|
|
| T |
65338 |
taaagaaagatcatcccaaagaggatgaagaaatgactt |
65376 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 17 - 155
Target Start/End: Original strand, 74416 - 74554
Alignment:
| Q |
17 |
gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc |
116 |
Q |
| |
|
|||||||||||| ||||||||| | | |||||||||| |||||||||||||||||| ||||||||||||||| |||| | |||||||||||||||| |
|
|
| T |
74416 |
gacatcaccaatgttgacaaagggaaagtaaagcagaaagttgtgttcgaaatggttaaaaaaccagcaacagagagaatctaacccccattgtcaattt |
74515 |
T |
|
| Q |
117 |
tgaagaaagatcattccaaagaagatgaggagatgactt |
155 |
Q |
| |
|
| |||||||||||| ||||||| ||||| || ||||||| |
|
|
| T |
74516 |
taaagaaagatcatcccaaagaggatgaagaaatgactt |
74554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0019 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0019
Description:
Target: scaffold0019; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 17 - 204
Target Start/End: Complemental strand, 159273 - 159086
Alignment:
| Q |
17 |
gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc |
116 |
Q |
| |
|
|||||||||||||||||||||| | || ||||||||||| || || ||||||||||| || ||||||||||| |||| ||||| || || ||||| |
|
|
| T |
159273 |
gacatcaccaatattgacaaagggaaagggaagcagaaagccgtttttgaaatggttaaaaagccagcaacagaaagaatctcaccgcccttatcaatct |
159174 |
T |
|
| Q |
117 |
tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggt |
204 |
Q |
| |
|
|||||||| | ||| |||| || ||||| || |||||||| |||||||| | ||||||||| ||||| |||||||| ||||||||||| |
|
|
| T |
159173 |
tgaagaaaaaccatcccaaggaggatgaagaaatgacttcgaatttcactggatctgaccctagtctcgacatagtatgcaatgtggt |
159086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0107 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0107
Description:
Target: scaffold0107; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 165
Target Start/End: Original strand, 1844 - 1992
Alignment:
| Q |
17 |
gacatcaccaatattgacaaagtagagggcaagcagaaagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattc |
116 |
Q |
| |
|
|||||||||||| ||||||||| | || ||||||| |||||| |||||||||||||| ||||||||||||||| |||| |||||||| |||||||| |
|
|
| T |
1844 |
gacatcaccaatgttgacaaagggaaaggaaagcagagagctgttttcgaaatggttaaaaaaccagcaacagagagaatctcaccccccttgtcaatct |
1943 |
T |
|
| Q |
117 |
tgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcac |
165 |
Q |
| |
|
| |||||||| ||| |||| | ||||| || |||||||| |||||||| |
|
|
| T |
1944 |
taaagaaagaccatcccaagtaggatgaagaaatgacttcgaatttcac |
1992 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013 (Bit Score: 45; Significance: 8e-17; HSPs: 4)
Name: scaffold0013
Description:
Target: scaffold0013; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 68 - 204
Target Start/End: Original strand, 75405 - 75541
Alignment:
| Q |
68 |
atggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacgg |
167 |
Q |
| |
|
|||||||| |||||||| || || |||| || || || || |||||| |||||||||| ||| | ||||| ||||| || ||||| ||||||||||| | |
|
|
| T |
75405 |
atggttaaaaaaccagccacggaaagaatctcccctcctttatcaattttgaagaaagaccatcctaaagaggatgaagaaatgacgtcaaatttcacag |
75504 |
T |
|
| Q |
168 |
aatctgacccaagtcttgacatagtttgcaatgtggt |
204 |
Q |
| |
|
|||||||| ||||||| || ||||| ||||||||||| |
|
|
| T |
75505 |
aatctgactcaagtctcgatatagtatgcaatgtggt |
75541 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 110 - 204
Target Start/End: Original strand, 83876 - 83970
Alignment:
| Q |
110 |
tcaattctgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggt |
204 |
Q |
| |
|
|||||| |||||||||| ||| | ||||| ||||| | ||||| ||||||||||| ||||||||||||||||| || ||||| ||||||||||| |
|
|
| T |
83876 |
tcaattttgaagaaagaccatactaaagaggatgaaaaaatgacgtcaaatttcacagaatctgacccaagtctcgatatagtatgcaatgtggt |
83970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 110 - 204
Target Start/End: Original strand, 121548 - 121642
Alignment:
| Q |
110 |
tcaattctgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggt |
204 |
Q |
| |
|
|||||| |||||||||| ||| | ||||| ||||| | ||||| ||||||||||| ||||||||||||||||| || ||||| ||||||||||| |
|
|
| T |
121548 |
tcaattttgaagaaagaccatactaaagaggatgaaaaaatgacgtcaaatttcacagaatctgacccaagtctcgatatagtatgcaatgtggt |
121642 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 148842 - 148897
Alignment:
| Q |
149 |
atgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggt |
204 |
Q |
| |
|
||||| ||||||||||| |||||||||||||||| || ||||| ||||||||||| |
|
|
| T |
148842 |
atgacgtcaaatttcacaaaatctgacccaagtctcgatatagtatgcaatgtggt |
148897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0046 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0046
Description:
Target: scaffold0046; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 96 - 222
Target Start/End: Original strand, 33613 - 33739
Alignment:
| Q |
96 |
tttcacccccattgtcaattctgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttg |
195 |
Q |
| |
|
||||||| || || ||||| |||||||||| ||| ||||||| ||||| || |||||||| ||||||| | ||||||||| ||||| |||||||| || |
|
|
| T |
33613 |
tttcacctcccttatcaatcttgaagaaagaccatcccaaagaggatgaagaaatgacttcgaatttcattggatctgaccccagtctcgacatagtgtg |
33712 |
T |
|
| Q |
196 |
caatgtggtttccatcttgcctgtgga |
222 |
Q |
| |
|
||||||||| || | ||||||||||| |
|
|
| T |
33713 |
caatgtggtgtcagttttgcctgtgga |
33739 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0362 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0362
Description:
Target: scaffold0362; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 54 - 222
Target Start/End: Original strand, 14463 - 14631
Alignment:
| Q |
54 |
aagctgtgttcgaaatggttaagaaaccagcaacagagcgaatttcacccccattgtcaattctgaagaaagatcattccaaagaagatgaggagatgac |
153 |
Q |
| |
|
||||||| |||||||||||||| |||||||| || || |||| || || || || |||||| |||||| ||||||| | || || ||||| || ||||| |
|
|
| T |
14463 |
aagctgttttcgaaatggttaaaaaaccagccacggaaagaatctcccctcccttatcaattttgaagagagatcatcctaaggaggatgaagaaatgac |
14562 |
T |
|
| Q |
154 |
ttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggtttccatcttgcctgtgga |
222 |
Q |
| |
|
||| |||||||| | |||| |||| ||||| || ||| | |||||||| || || | ||||||||||| |
|
|
| T |
14563 |
ttcgaatttcactggatctaaccccagtctcgatataatatgcaatgtcgtgtcagttttgcctgtgga |
14631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0053 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0053
Description:
Target: scaffold0053; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 204
Target Start/End: Complemental strand, 42379 - 42285
Alignment:
| Q |
110 |
tcaattctgaagaaagatcattccaaagaagatgaggagatgacttcaaatttcacggaatctgacccaagtcttgacatagtttgcaatgtggt |
204 |
Q |
| |
|
|||||| |||||||| ||||| | || || ||||| || ||||| || |||||||| |||||||| |||||||| || ||||| ||||||||||| |
|
|
| T |
42379 |
tcaattttgaagaaaaatcatcctaaggaggatgaagaaatgacgtcgaatttcactgaatctgatccaagtctcgatatagtgtgcaatgtggt |
42285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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