View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8206A_low_192 (Length: 221)
Name: NF8206A_low_192
Description: NF8206A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8206A_low_192 |
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Alignment Details
Target: chr5 (Bit Score: 173; Significance: 3e-93; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 23 - 195
Target Start/End: Original strand, 6853650 - 6853822
Alignment:
| Q |
23 |
aaggaaaataaaggaaatatcagaaaagcaacgttttctctgccctatggcattagcccccctatgatcaaataattatctgatcctcccatttctccaa |
122 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6853650 |
aaggaaaataaaggaaatatcagaaaagcaacgttttctctgccctatggcattagcccccctatgatcaaataattatctgatcctcccatttctccaa |
6853749 |
T |
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| Q |
123 |
gctcccccatgaaatcccccctctccaaatgggttccacatcccttcgccaatatcctccaactacctgtcca |
195 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6853750 |
gctcccccatgaaatcccccctctccaaatgggttccacatcccttcgccaatatcctccaactacctgtcca |
6853822 |
T |
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