View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8206A_low_201 (Length: 216)
Name: NF8206A_low_201
Description: NF8206A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8206A_low_201 |
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Alignment Details
Target: chr5 (Bit Score: 161; Significance: 5e-86; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 22 - 197
Target Start/End: Complemental strand, 29664248 - 29664075
Alignment:
| Q |
22 |
tttaaatctatcaataatcagaccagtgttgagacatattttggtgatgaggtgaagaagggagtgtaggagtgtgacagttacaaaaaccccaaaccag |
121 |
Q |
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| T |
29664248 |
tttaaatctatcaataatcagaccagtgttgagacat--tttggtgatgaggtgaagaagggagtgtaggagtgtgacagttacaaaaaccccaaaccag |
29664151 |
T |
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| Q |
122 |
aaggtattaattttagttttcttaaacactagttaaaaatcaaagttgattttatgagatttctaattgacatttt |
197 |
Q |
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| T |
29664150 |
atggtattaattttagttttcttaaacactagttaaaaatcaaagttgattttatgagatttctaattgacatttt |
29664075 |
T |
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