View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8206A_low_208 (Length: 209)

Name: NF8206A_low_208
Description: NF8206A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8206A_low_208
NF8206A_low_208
[»] scaffold0090 (1 HSPs)
scaffold0090 (14-187)||(18062-18236)
[»] scaffold0924 (1 HSPs)
scaffold0924 (52-186)||(740-875)
[»] chr7 (24 HSPs)
chr7 (17-179)||(14422881-14423043)
chr7 (33-180)||(18873272-18873420)
chr7 (24-186)||(12709833-12709995)
chr7 (24-186)||(13122904-13123066)
chr7 (33-175)||(15168087-15168230)
chr7 (33-171)||(10895795-10895934)
chr7 (17-175)||(16009474-16009631)
chr7 (35-186)||(13743623-13743774)
chr7 (76-173)||(16677250-16677348)
chr7 (76-173)||(17651486-17651584)
chr7 (62-186)||(12590633-12590756)
chr7 (62-186)||(13007374-13007497)
chr7 (120-186)||(21230949-21231015)
chr7 (120-175)||(11382871-11382926)
chr7 (120-175)||(11389348-11389403)
chr7 (120-186)||(20311039-20311107)
chr7 (112-175)||(13679485-13679548)
chr7 (121-176)||(2971254-2971309)
chr7 (121-176)||(20906461-20906516)
chr7 (121-175)||(11311059-11311113)
chr7 (140-181)||(831628-831669)
chr7 (140-181)||(1196808-1196849)
chr7 (140-181)||(34958578-34958619)
chr7 (119-175)||(46625961-46626017)
[»] scaffold0025 (1 HSPs)
scaffold0025 (17-173)||(14398-14555)
[»] chr3 (21 HSPs)
chr3 (17-173)||(24192852-24193009)
chr3 (17-176)||(23370505-23370664)
chr3 (17-175)||(9534225-9534382)
chr3 (33-175)||(14762758-14762901)
chr3 (35-173)||(20247791-20247930)
chr3 (33-173)||(38310802-38310943)
chr3 (93-186)||(41455087-41455178)
chr3 (66-186)||(16801457-16801576)
chr3 (92-176)||(24933828-24933910)
chr3 (114-175)||(18929239-18929300)
chr3 (111-175)||(17240513-17240577)
chr3 (121-176)||(13302240-13302295)
chr3 (121-176)||(13323787-13323842)
chr3 (17-93)||(55499185-55499261)
chr3 (101-176)||(10389443-10389518)
chr3 (101-176)||(10414532-10414607)
chr3 (101-176)||(10421202-10421277)
chr3 (121-176)||(12033444-12033499)
chr3 (121-176)||(13312896-13312951)
chr3 (121-176)||(17131732-17131787)
chr3 (121-176)||(51301589-51301644)
[»] scaffold0026 (2 HSPs)
scaffold0026 (33-186)||(11840-11994)
scaffold0026 (17-176)||(111583-111741)
[»] chr5 (12 HSPs)
chr5 (33-187)||(38144525-38144679)
chr5 (33-175)||(19512298-19512441)
chr5 (30-175)||(28370055-28370200)
chr5 (33-180)||(22751053-22751201)
chr5 (62-180)||(23528573-23528690)
chr5 (111-175)||(18407944-18408008)
chr5 (120-186)||(22438736-22438803)
chr5 (111-175)||(23111200-23111264)
chr5 (121-176)||(19236900-19236955)
chr5 (120-187)||(42961566-42961633)
chr5 (123-176)||(22461158-22461211)
chr5 (123-176)||(22467782-22467835)
[»] chr1 (12 HSPs)
chr1 (17-175)||(20437024-20437182)
chr1 (62-186)||(41111977-41112100)
chr1 (111-175)||(32651563-32651627)
chr1 (111-175)||(18712790-18712854)
chr1 (120-175)||(19663517-19663572)
chr1 (119-175)||(20805320-20805376)
chr1 (120-175)||(11158093-11158148)
chr1 (119-173)||(10811785-10811839)
chr1 (121-176)||(20851132-20851187)
chr1 (121-176)||(20857759-20857814)
chr1 (121-176)||(21706276-21706331)
chr1 (121-176)||(21710818-21710873)
[»] chr6 (23 HSPs)
chr6 (17-186)||(10986170-10986339)
chr6 (17-175)||(4477754-4477912)
chr6 (17-175)||(23839095-23839253)
chr6 (33-186)||(29614136-29614291)
chr6 (17-186)||(18800334-18800503)
chr6 (33-175)||(23057850-23057993)
chr6 (56-186)||(930085-930215)
chr6 (62-186)||(12168305-12168428)
chr6 (62-186)||(19287214-19287337)
chr6 (62-186)||(19785859-19785982)
chr6 (62-186)||(19878398-19878521)
chr6 (62-186)||(19884174-19884297)
chr6 (92-176)||(34639986-34640069)
chr6 (92-176)||(34646660-34646743)
chr6 (92-176)||(25469704-25469785)
chr6 (120-186)||(24512833-24512899)
chr6 (104-176)||(31252406-31252478)
chr6 (123-175)||(9187498-9187550)
chr6 (119-175)||(25348486-25348542)
chr6 (20-173)||(21565214-21565367)
chr6 (119-173)||(25598643-25598697)
chr6 (119-175)||(25397172-25397228)
chr6 (119-175)||(19471335-19471391)
[»] chr2 (15 HSPs)
chr2 (37-186)||(26583744-26583892)
chr2 (30-175)||(6483627-6483772)
chr2 (30-175)||(6487094-6487239)
chr2 (17-175)||(19661454-19661611)
chr2 (92-176)||(5706023-5706106)
chr2 (72-175)||(23265093-23265197)
chr2 (72-175)||(23280161-23280265)
chr2 (72-175)||(21908311-21908414)
chr2 (17-173)||(23878905-23879060)
chr2 (20-175)||(23101463-23101618)
chr2 (77-185)||(26885139-26885246)
chr2 (20-173)||(23089057-23089210)
chr2 (119-175)||(24661576-24661632)
chr2 (121-176)||(10577-10632)
chr2 (121-176)||(25180929-25180984)
[»] scaffold0553 (1 HSPs)
scaffold0553 (17-176)||(10195-10354)
[»] scaffold0544 (1 HSPs)
scaffold0544 (17-176)||(1525-1684)
[»] scaffold0029 (1 HSPs)
scaffold0029 (33-186)||(111793-111948)
[»] scaffold0247 (1 HSPs)
scaffold0247 (17-186)||(11238-11407)
[»] chr8 (14 HSPs)
chr8 (30-176)||(44477532-44477678)
chr8 (30-176)||(44492690-44492836)
chr8 (24-186)||(23866518-23866680)
chr8 (17-173)||(8727735-8727891)
chr8 (62-186)||(17054533-17054656)
chr8 (111-175)||(23482053-23482117)
chr8 (119-175)||(18614271-18614327)
chr8 (120-186)||(14056553-14056619)
chr8 (119-175)||(39364919-39364975)
chr8 (120-186)||(25111976-25112042)
chr8 (121-175)||(29643386-29643440)
chr8 (121-176)||(24320670-24320725)
chr8 (120-187)||(27940840-27940907)
chr8 (119-175)||(21931696-21931752)
[»] scaffold0058 (1 HSPs)
scaffold0058 (35-186)||(206-356)
[»] scaffold1773 (1 HSPs)
scaffold1773 (33-183)||(1090-1240)
[»] scaffold0006 (1 HSPs)
scaffold0006 (33-183)||(50091-50241)
[»] chr4 (11 HSPs)
chr4 (52-186)||(8045822-8045955)
chr4 (62-186)||(11848049-11848179)
chr4 (92-176)||(53483677-53483760)
chr4 (120-186)||(15408139-15408205)
chr4 (119-175)||(8834895-8834951)
chr4 (119-175)||(13888641-13888697)
chr4 (121-173)||(14486661-14486713)
chr4 (119-175)||(15245215-15245271)
chr4 (119-170)||(22724691-22724742)
chr4 (140-181)||(15747551-15747592)
chr4 (119-175)||(15308120-15308176)
[»] scaffold0154 (1 HSPs)
scaffold0154 (102-186)||(30839-30923)
[»] scaffold0117 (2 HSPs)
scaffold0117 (76-186)||(1887-1997)
scaffold0117 (76-186)||(8564-8674)
[»] scaffold0456 (2 HSPs)
scaffold0456 (105-180)||(916-991)
scaffold0456 (105-180)||(8061-8136)
[»] scaffold0796 (2 HSPs)
scaffold0796 (62-181)||(1727-1845)
scaffold0796 (62-181)||(5750-5868)
[»] scaffold0129 (1 HSPs)
scaffold0129 (92-182)||(45268-45357)
[»] scaffold0107 (1 HSPs)
scaffold0107 (120-186)||(40521-40587)
[»] scaffold0222 (1 HSPs)
scaffold0222 (111-175)||(16811-16875)
[»] scaffold0004 (1 HSPs)
scaffold0004 (111-175)||(116887-116951)
[»] scaffold0310 (1 HSPs)
scaffold0310 (120-186)||(17643-17710)
[»] scaffold0019 (1 HSPs)
scaffold0019 (120-186)||(135473-135539)
[»] scaffold0461 (1 HSPs)
scaffold0461 (111-175)||(8-72)
[»] scaffold0235 (1 HSPs)
scaffold0235 (122-186)||(22582-22646)
[»] scaffold0146 (1 HSPs)
scaffold0146 (111-175)||(13623-13687)
[»] scaffold0020 (1 HSPs)
scaffold0020 (111-175)||(101928-101992)
[»] scaffold0476 (1 HSPs)
scaffold0476 (17-173)||(3295-3452)
[»] scaffold0124 (1 HSPs)
scaffold0124 (120-175)||(34276-34331)
[»] scaffold0815 (1 HSPs)
scaffold0815 (124-186)||(1453-1515)
[»] scaffold0077 (1 HSPs)
scaffold0077 (17-173)||(3624-3780)
[»] scaffold2054 (1 HSPs)
scaffold2054 (86-186)||(680-780)
[»] scaffold0138 (1 HSPs)
scaffold0138 (119-175)||(12296-12352)
[»] scaffold0790 (1 HSPs)
scaffold0790 (154-189)||(5487-5522)
[»] scaffold0317 (1 HSPs)
scaffold0317 (112-175)||(1378-1441)
[»] scaffold0139 (1 HSPs)
scaffold0139 (120-175)||(14997-15052)
[»] scaffold0001 (1 HSPs)
scaffold0001 (98-185)||(493019-493105)
[»] scaffold0261 (1 HSPs)
scaffold0261 (121-186)||(23559-23624)
[»] scaffold0609 (1 HSPs)
scaffold0609 (104-176)||(5857-5929)
[»] scaffold0096 (1 HSPs)
scaffold0096 (119-179)||(39503-39563)
[»] scaffold0348 (1 HSPs)
scaffold0348 (121-176)||(9336-9391)
[»] scaffold0127 (1 HSPs)
scaffold0127 (121-176)||(10239-10294)
[»] scaffold0023 (1 HSPs)
scaffold0023 (121-176)||(135438-135493)
[»] scaffold1318 (1 HSPs)
scaffold1318 (121-175)||(1913-1967)
[»] scaffold0335 (1 HSPs)
scaffold0335 (119-175)||(2628-2684)
[»] scaffold0249 (1 HSPs)
scaffold0249 (101-176)||(13894-13970)
[»] scaffold0003 (2 HSPs)
scaffold0003 (161-189)||(80293-80321)
scaffold0003 (161-189)||(100015-100043)


Alignment Details
Target: scaffold0090 (Bit Score: 127; Significance: 9e-66; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 18062 - 18236
Alignment:
Q  14 tggacatcacattacaaacagaattaacatgaccagtaccatttcccgtcagaatcgtcatcaaccct-aaccctcaatttattttccaaaaactatgca 112  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||| || ||| ||||||||||||||||||| ||| ||| |||    
T  18062 tggacatcacattacaaacagaattaacatgaccattaccatttcccgttagaatcatcattaaaccttaaccctcaatttattttcctaaagctaagca 18161  T
Q  113 attaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaat 187  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18162 attaggtcaattttcaaaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaat 18236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 112; Significance: 8e-57; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 52 - 186
Target Start/End: Complemental strand, 875 - 740
Alignment:
Q  52 ccatttcccgtcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattatt 150  Q
    ||||||||| ||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  875 ccatttcccttcataatcctcatcaaaccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattatt 776  T
Q  151 aagagatagtctcacccttaccttagttttgcagaa 186  Q
     |||||||||||||||||||||||||||||||||||    
T  775 gagagatagtctcacccttaccttagttttgcagaa 740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 112; Significance: 8e-57; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 17 - 179
Target Start/End: Original strand, 14422881 - 14423043
Alignment:
Q  17 acatcacattacaaacagaattaacatgaccagtaccatttcccgtcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaatt 115  Q
    |||| ||||||||| |||||||||||||| || ||||  ||||| |||||||| ||||||| |||||||||||||||||| |||||||||||||||||||    
T  14422881 acattacattacaa-cagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaatt 14422979  T
Q  116 aggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttagttt 179  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  14422980 aggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttt 14423043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 33 - 180
Target Start/End: Original strand, 18873272 - 18873420
Alignment:
Q  33 agaattaacatgaccagtacc-atttcccgtcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcaga 130  Q
    ||||||||||||| || |||| ||||||| |||||||| ||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  18873272 agaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaattttcaga 18873370  T
Q  131 aattatagattatgattattaagagatagtctcacccttaccttagtttt 180  Q
    |||||||||||||||||||  ||||| |||||||||||||||||||||||    
T  18873371 aattatagattatgattatcgagagaaagtctcacccttaccttagtttt 18873420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 24 - 186
Target Start/End: Complemental strand, 12709995 - 12709833
Alignment:
Q  24 attacaaacagaattaacatgaccagtacc-atttcccgtcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaattaggtca 121  Q
    |||||||| ||||||||||||| || |||| ||||| | ||| |||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  12709995 attacaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaa-ctatgcaattaggtca 12709897  T
Q  122 attttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaa 186  Q
    |||| ||| ||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  12709896 attt-caggaattataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 12709833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 24 - 186
Target Start/End: Complemental strand, 13123066 - 13122904
Alignment:
Q  24 attacaaacagaattaacatgaccagtacc-atttcccgtcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaattaggtca 121  Q
    |||||||| ||||||||||||| || |||| ||||| | ||| |||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  13123066 attacaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaa-ctatgcaattaggtca 13122968  T
Q  122 attttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaa 186  Q
    |||| ||| ||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  13122967 attt-caggaattataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 13122904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 33 - 175
Target Start/End: Original strand, 15168087 - 15168230
Alignment:
Q  33 agaattaacatgaccagtacc-atttcccgtcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcaga 130  Q
    ||||||||||||| || |||| ||||||| |||||||| ||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  15168087 agaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaattttcaga 15168185  T
Q  131 aattatagattatgattattaagagatagtctcacccttacctta 175  Q
    |||||||||||||||||||  ||||||||||||||||||||||||    
T  15168186 aattatagattatgattatcgagagatagtctcacccttacctta 15168230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 33 - 171
Target Start/End: Complemental strand, 10895934 - 10895795
Alignment:
Q  33 agaattaacatgaccagtaccatttcccgtcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcagaa 131  Q
    ||||||||||||| || ||||  ||||| |||||||| ||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||| ||    
T  10895934 agaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaattttcaaaa 10895835  T
Q  132 attatagattatgattattaagagatagtctcacccttac 171  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  10895834 attatagattatgattattgagagatagtctcacccttac 10895795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 16009474 - 16009631
Alignment:
Q  17 acatcacattacaaacagaattaacatgaccagtaccatttcccgtcagaatcgtcatcaaccct-aaccctcaatttattttccaaaaactatgcaatt 115  Q
    |||| ||||||||| |||||||||||||| || ||||  ||||| |||||||| ||||||| ||| ||||| |||||||| |||||||| | ||||||||    
T  16009474 acattacattacaa-cagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccttaacccacaatttatcttccaaaacc-atgcaatt 16009571  T
Q  116 aggtcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 175  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  16009572 aggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 16009631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 35 - 186
Target Start/End: Original strand, 13743623 - 13743774
Alignment:
Q  35 aattaacatgaccagtacc-atttcccgtcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcagaaa 132  Q
    ||||||||||| || |||| ||||| | ||| |||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||    
T  13743623 aattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaa-ctatgcaattaggtcaattt-caggaa 13743720  T
Q  133 ttatagattatgattattaagagatagtctcacccttaccttagttttgcagaa 186  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  13743721 ttataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 13743774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 76 - 173
Target Start/End: Original strand, 16677250 - 16677348
Alignment:
Q  76 aaccctaaccctcaattt-attttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttacct 173  Q
    |||||||||||| ||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  16677250 aaccctaacccttaattttatcttccaaaaactatgcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacccttacct 16677348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 76 - 173
Target Start/End: Original strand, 17651486 - 17651584
Alignment:
Q  76 aaccctaaccctcaattt-attttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttacct 173  Q
    |||||||||||| ||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  17651486 aaccctaacccttaattttatcttccaaaaactatgcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacccttacct 17651584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 62 - 186
Target Start/End: Complemental strand, 12590756 - 12590633
Alignment:
Q  62 tcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagt 160  Q
    |||||||| ||||||| |||||||  |||  ||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  12590756 tcagaatcatcatcaaaccctaactttcatattattttccaaaa-ctattcaattaggtcaattt-cagaaattatagattatgattattgagagatagt 12590659  T
Q  161 ctcacccttaccttagttttgcagaa 186  Q
    ||||||||||||||||||||||||||    
T  12590658 ctcacccttaccttagttttgcagaa 12590633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 62 - 186
Target Start/End: Original strand, 13007374 - 13007497
Alignment:
Q  62 tcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagt 160  Q
    |||||||| ||||||| |||||||  |||  ||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  13007374 tcagaatcatcatcaaaccctaactttcatcttattttccaaaa-ctattcaattaggtcaattt-cagaaattatagattatgattattgagagatagt 13007471  T
Q  161 ctcacccttaccttagttttgcagaa 186  Q
    ||||||||||||||||||||||||||    
T  13007472 ctcacccttaccttagttttgcagaa 13007497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 120 - 186
Target Start/End: Complemental strand, 21231015 - 21230949
Alignment:
Q  120 caattttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaa 186  Q
    |||||||||||||||||| | |||||||||| ||||||||||||||||||||||||| |||||||||    
T  21231015 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgcagaa 21230949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 175
Target Start/End: Complemental strand, 11382926 - 11382871
Alignment:
Q  120 caattttcagaaattatagattatgattattaagagatagtctcacccttacctta 175  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  11382926 caattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11382871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 175
Target Start/End: Complemental strand, 11389403 - 11389348
Alignment:
Q  120 caattttcagaaattatagattatgattattaagagatagtctcacccttacctta 175  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  11389403 caattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11389348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 186
Target Start/End: Complemental strand, 20311107 - 20311039
Alignment:
Q  120 caattttcagaaattatagattatgattattaagagatagtctcacccttaccttag--ttttgcagaa 186  Q
    ||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||  ||||||||||    
T  20311107 caattttcagaaattatacgttatgattattgagagatagtctcacccttaccttagatttttgcagaa 20311039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 175
Target Start/End: Original strand, 13679485 - 13679548
Alignment:
Q  112 aattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 175  Q
    |||||| |||||||||| |||||||| || ||||| ||| | ||||||||||||||||||||||    
T  13679485 aattagatcaattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta 13679548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 2971254 - 2971309
Alignment:
Q  121 aattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 176  Q
    ||||||||||||||||| ||||||| |||| | ||||| || ||||||||||||||    
T  2971254 aattttcagaaattataaattatgactattgaaagataatcccacccttaccttag 2971309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 176
Target Start/End: Complemental strand, 20906516 - 20906461
Alignment:
Q  121 aattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 176  Q
    ||||||||||||||||| ||||||| |||| | ||||| || ||||||||||||||    
T  20906516 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20906461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 175
Target Start/End: Original strand, 11311059 - 11311113
Alignment:
Q  121 aattttcagaaattatagattatgattattaagagatagtctcacccttacctta 175  Q
    |||||| ||||||| || | ||| |||||| ||||||||||||||||||||||||    
T  11311059 aatttttagaaattctacactattattattgagagatagtctcacccttacctta 11311113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 831669 - 831628
Alignment:
Q  140 ttatgattattaagagatagtctcacccttaccttagttttg 181  Q
    |||| |||||| |||| |||||||||||||||||||||||||    
T  831669 ttataattattgagagttagtctcacccttaccttagttttg 831628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 1196849 - 1196808
Alignment:
Q  140 ttatgattattaagagatagtctcacccttaccttagttttg 181  Q
    |||| |||||| |||| |||||||||||||||||||||||||    
T  1196849 ttataattattgagagttagtctcacccttaccttagttttg 1196808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 181
Target Start/End: Original strand, 34958578 - 34958619
Alignment:
Q  140 ttatgattattaagagatagtctcacccttaccttagttttg 181  Q
    |||| |||||| |||| |||||||||||||||||||||||||    
T  34958578 ttataattattgagagttagtctcacccttaccttagttttg 34958619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 46625961 - 46626017
Alignment:
Q  119 tcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 175  Q
    ||||||||| ||||||||| ||||| || ||| |||| |||||||||||||| ||||    
T  46625961 tcaattttccgaaattatatattataatcattgagagttagtctcacccttatctta 46626017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 111; Significance: 3e-56; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 17 - 173
Target Start/End: Complemental strand, 14555 - 14398
Alignment:
Q  17 acatcacattacaaacagaattaacatgaccagtacc-atttcccgtcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaat 114  Q
    |||||||||||||| |||||||||||||| || |||| ||||||| |||||||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  14555 acatcacattacaa-cagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaat 14457  T
Q  115 taggtcaattttcagaaattatagattatgattattaagagatagtctcacccttacct 173  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  14456 taggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 14398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 111; Significance: 3e-56; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 17 - 173
Target Start/End: Original strand, 24192852 - 24193009
Alignment:
Q  17 acatcacattacaaacagaattaacatgaccagtacc-atttcccgtcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaat 114  Q
    |||||||||||||| |||||||||||||| || |||| ||||||| |||||||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  24192852 acatcacattacaa-cagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaat 24192950  T
Q  115 taggtcaattttcagaaattatagattatgattattaagagatagtctcacccttacct 173  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  24192951 taggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 24193009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 17 - 176
Target Start/End: Complemental strand, 23370664 - 23370505
Alignment:
Q  17 acatcacattacaaacagaattaacatgaccagtaccatttcccgtcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaatt 115  Q
    |||| ||||||||| |||||||||||||| || ||||  ||||| |||||||| ||||||| ||||||||| |||||||| |||||||||||||||||||    
T  23370664 acattacattacaa-cagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaatt 23370566  T
Q  116 aggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 176  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  23370565 aggtcaattttcagaaattatagattatgattattgagagatagtcccacccttaccttag 23370505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 9534225 - 9534382
Alignment:
Q  17 acatcacattacaaacagaattaacatgaccagtaccatttcccgtcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaatt 115  Q
    |||| ||||||||| |||||||||||||| || ||||  ||||  |||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||    
T  9534225 acattacattacaa-cagaattaacatgatcaatacccattccactcagaatcatcatcaaaccctaaccctcaatttattttccaaaa-ctatgcaatt 9534322  T
Q  116 aggtcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 175  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9534323 aggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 9534382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 33 - 175
Target Start/End: Complemental strand, 14762901 - 14762758
Alignment:
Q  33 agaattaacatgaccagtacc-atttcccgtcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcaga 130  Q
    ||||||||||||| || |||| ||||||| |||||||| ||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  14762901 agaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaattttcaga 14762803  T
Q  131 aattatagattatgattattaagagatagtctcacccttacctta 175  Q
    |||||||||||||||||||  ||||||||||||||||||||||||    
T  14762802 aattatagattatgattatcgagagatagtctcacccttacctta 14762758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 35 - 173
Target Start/End: Complemental strand, 20247930 - 20247791
Alignment:
Q  35 aattaacatgaccagtacc-atttcccgtcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcagaaa 132  Q
    ||||||||||| || |||| ||||||| |||||||| ||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  20247930 aattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaattttcagaaa 20247832  T
Q  133 ttatagattatgattattaagagatagtctcacccttacct 173  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  20247831 ttatagattatgattattgagagatagtctcacccttacct 20247791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 33 - 173
Target Start/End: Complemental strand, 38310943 - 38310802
Alignment:
Q  33 agaattaacatgaccagtacc-atttcccgtcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcaga 130  Q
    ||||||||||||| || |||| ||||||| |||||||| ||||||| |||||||||||||||||| |||||||| |||||||||||||||||| ||||||    
T  38310943 agaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaatattcaga 38310845  T
Q  131 aattatagattatgattattaagagatagtctcacccttacct 173  Q
    |||||||||||||||||||  ||||||||||||||||||||||    
T  38310844 aattatagattatgattatcgagagatagtctcacccttacct 38310802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 93 - 186
Target Start/End: Complemental strand, 41455178 - 41455087
Alignment:
Q  93 tattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaa 186  Q
    |||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  41455178 tattttccaaaa-ctattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 41455087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 66 - 186
Target Start/End: Complemental strand, 16801576 - 16801457
Alignment:
Q  66 aatcgtcatcaaccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcac 165  Q
    |||| ||||||||||||||| |||||||  | | ||||| ||| ||||| |||||||||||||||||||||| || ||||||||| ||||||||||||||    
T  16801576 aatcatcatcaaccctaaccttcaattttatcttcaaaagctaagcaatcaggtcaattttcagaaattatatat-atgattattgagagatagtctcac 16801478  T
Q  166 ccttaccttagttttgcagaa 186  Q
    |||||||||||||||||||||    
T  16801477 ccttaccttagttttgcagaa 16801457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 92 - 176
Target Start/End: Complemental strand, 24933910 - 24933828
Alignment:
Q  92 ttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 176  Q
    ||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  24933910 ttattttccaaaa-ctattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttag 24933828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 114 - 175
Target Start/End: Original strand, 18929239 - 18929300
Alignment:
Q  114 ttaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 175  Q
    |||| ||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||    
T  18929239 ttagatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18929300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 17240577 - 17240513
Alignment:
Q  111 caattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 175  Q
    ||||||| ||||||||||||||||||  |||| ||||||| ||||||||||||||||||||||||    
T  17240577 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 17240513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 176
Target Start/End: Complemental strand, 13302295 - 13302240
Alignment:
Q  121 aattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 176  Q
    ||||||||||||||| | |||||||||||| | ||||| |||||||||||||||||    
T  13302295 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttag 13302240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 176
Target Start/End: Complemental strand, 13323842 - 13323787
Alignment:
Q  121 aattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 176  Q
    ||||||||||||||| | |||||||||||| | ||||| |||||||||||||||||    
T  13323842 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttag 13323787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 55499261 - 55499185
Alignment:
Q  17 acatcacattacaaacagaattaacatgaccagtaccatttcccgtcagaatcgtcatc-aaccctaaccctcaattt 93  Q
    |||||||||||||| || ||||||||||| || ||||  ||||| |||||||| ||||| ||||||||||||||||||    
T  55499261 acatcacattacaa-cataattaacatgatcattacccattcccctcagaatcatcatcaaaccctaaccctcaattt 55499185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 176
Target Start/End: Complemental strand, 10389518 - 10389443
Alignment:
Q  101 aaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 176  Q
    ||||||||| ||||||| | | ||||||||||||||| ||||| || ||| | ||||| || ||||||||||||||    
T  10389518 aaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatcccacccttaccttag 10389443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 176
Target Start/End: Complemental strand, 10414607 - 10414532
Alignment:
Q  101 aaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 176  Q
    ||||||||| ||||||| | | ||||||||||||||| ||||| || ||| | ||||| || ||||||||||||||    
T  10414607 aaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatcccacccttaccttag 10414532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 176
Target Start/End: Complemental strand, 10421277 - 10421202
Alignment:
Q  101 aaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 176  Q
    ||||||||| ||||||| | | ||||||||||||||| ||||| || ||| | ||||| || ||||||||||||||    
T  10421277 aaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatcccacccttaccttag 10421202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 176
Target Start/End: Complemental strand, 12033499 - 12033444
Alignment:
Q  121 aattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 176  Q
    ||||||||||||||||| ||||||| |||| | ||||| || ||||||||||||||    
T  12033499 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 12033444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 176
Target Start/End: Complemental strand, 13312951 - 13312896
Alignment:
Q  121 aattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 176  Q
    |||||||| |||||| | |||||||||||| | ||||| |||||||||||||||||    
T  13312951 aattttcaaaaattacatattatgattattgaaagataatctcacccttaccttag 13312896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 17131732 - 17131787
Alignment:
Q  121 aattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 176  Q
    ||||||||||||||||| ||||||| |||| | ||||| || ||||||||||||||    
T  17131732 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 17131787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 51301589 - 51301644
Alignment:
Q  121 aattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 176  Q
    ||||||||||||||| | ||||||||||||   ||||| |||||||||||||||||    
T  51301589 aattttcagaaattacatattatgattattggaagataatctcacccttaccttag 51301644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 108; Significance: 2e-54; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 33 - 186
Target Start/End: Complemental strand, 11994 - 11840
Alignment:
Q  33 agaattaacatgaccagtacc-atttcccgtcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcaga 130  Q
    ||||||||||||| || |||| ||||||| |||||||| ||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  11994 agaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaactctcaatttattttccaaaa-ctatgcaattaggtcaattttcaga 11896  T
Q  131 aattatagattatgattattaagagatagtctcacccttaccttagttttgcagaa 186  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  11895 aattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 11840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 17 - 176
Target Start/End: Original strand, 111583 - 111741
Alignment:
Q  17 acatcacattacaaacagaattaacatgaccagtaccatttcccgtcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaatt 115  Q
    |||| ||||||||| |||||||||||||| || ||||  ||||| |||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||    
T  111583 acattacattacaa-cagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaatttattttccaaaa-ctatgcaatt 111680  T
Q  116 aggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 176  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  111681 aggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 111741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 108; Significance: 2e-54; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 33 - 187
Target Start/End: Complemental strand, 38144679 - 38144525
Alignment:
Q  33 agaattaacatgaccagtaccatttcccgtcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcagaa 131  Q
    ||||||||||||| || ||||  ||||| |||||||| ||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  38144679 agaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaatttattttccaaaat-tatgcaattaggtcaattttcagaa 38144581  T
Q  132 attatagattatgattattaagagatagtctcacccttaccttagttttgcagaat 187  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  38144580 attatagattatgattattgagagatagtctcacccttaccttagttttgcagaat 38144525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 33 - 175
Target Start/End: Original strand, 19512298 - 19512441
Alignment:
Q  33 agaattaacatgaccagtaccatttcccgtcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcagaa 131  Q
    ||||||||||||| || ||||  ||||| ||| |||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  19512298 agaattaacatgatcaatacccattcccctcaaaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaa 19512397  T
Q  132 attatagattatgattattaagagatagtctcacccttacctta 175  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  19512398 attatagattatgattattgagagatagtctcacccttacctta 19512441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 30 - 175
Target Start/End: Complemental strand, 28370200 - 28370055
Alignment:
Q  30 aacagaattaacatgaccagtaccatttcccgtcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttca 128  Q
    |||||||||||||||| || ||||  ||||| ||| |||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  28370200 aacagaattaacatgatcaatacccattcccctcaaaatcatcatcaaaccctaaccctcaatttattttccaaaa-ctatgcaattaggtcaattttca 28370102  T
Q  129 gaaattatagattatgattattaagagatagtctcacccttacctta 175  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  28370101 gaaattatagattatgattattgagagatagtctcacccttacctta 28370055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 33 - 180
Target Start/End: Original strand, 22751053 - 22751201
Alignment:
Q  33 agaattaacatgaccagtacc-atttcccgtcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcaga 130  Q
    ||||||||||||| || |||| ||||||| |||||||| ||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  22751053 agaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaattttcaga 22751151  T
Q  131 aattatagattatgattattaagagatagtctcacccttaccttagtttt 180  Q
    |||||||||||||||||||  ||||| |||||||||||||||||||||||    
T  22751152 aattatagattatgattatcgagagaaagtctcacccttaccttagtttt 22751201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 62 - 180
Target Start/End: Original strand, 23528573 - 23528690
Alignment:
Q  62 tcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagt 160  Q
    |||||||| ||||||| |||||||  |||  ||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  23528573 tcagaatcatcatcaaaccctaactttcatcttattttccaaaa-ctattcaattaggtcaattt-cagaaattatagattatgattattgagagatagt 23528670  T
Q  161 ctcacccttaccttagtttt 180  Q
    ||||||||||||||||||||    
T  23528671 ctcacccttaccttagtttt 23528690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 18408008 - 18407944
Alignment:
Q  111 caattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 175  Q
    ||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  18408008 caattagatcaattttcagaaattatatattatgattattgagagatagtctcacccttacctta 18407944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 120 - 186
Target Start/End: Complemental strand, 22438803 - 22438736
Alignment:
Q  120 caattttcagaaattatagattatgattattaagagatagtctcacccttaccttag-ttttgcagaa 186  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  22438803 caattttcagaaattatacattatgattattgagagatagtctcacccttaccttagattttgcagaa 22438736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 23111264 - 23111200
Alignment:
Q  111 caattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 175  Q
    ||||||| ||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||    
T  23111264 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23111200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 19236900 - 19236955
Alignment:
Q  121 aattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 176  Q
    ||||||||||||||||| ||||||| |||| | ||||| || ||||||||||||||    
T  19236900 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 19236955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 120 - 187
Target Start/End: Original strand, 42961566 - 42961633
Alignment:
Q  120 caattttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaat 187  Q
    |||||||||||||| ||| ||||| || ||| |  | ||| |||||||||||||||||||||||||||    
T  42961566 caattttcagaaatcatatattataatcattgaaggttagcctcacccttaccttagttttgcagaat 42961633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 22461158 - 22461211
Alignment:
Q  123 ttttcagaaattatagattatgattattaagagatagtctcacccttaccttag 176  Q
    ||||||||||||||| ||||||| |||| | ||||| || ||||||||||||||    
T  22461158 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 22461211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 22467782 - 22467835
Alignment:
Q  123 ttttcagaaattatagattatgattattaagagatagtctcacccttaccttag 176  Q
    ||||||||||||||| ||||||| |||| | ||||| || ||||||||||||||    
T  22467782 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 22467835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 104; Significance: 5e-52; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 20437182 - 20437024
Alignment:
Q  17 acatcacattacaaacagaattaacatgaccagtaccatttcccgtcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaatt 115  Q
    |||| ||||||||| || ||||||||||| || ||||  ||||| |||||||| ||||||| |||||||||||||||||| |||||||||||||||||||    
T  20437182 acattacattacaa-cataattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaatt 20437084  T
Q  116 aggtcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 175  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20437083 aggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 20437024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 62 - 186
Target Start/End: Original strand, 41111977 - 41112100
Alignment:
Q  62 tcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagt 160  Q
    |||||||| ||||||| |||||||  |||  ||||||| ||||| |||| ||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  41111977 tcagaatcatcatcaaaccctaactttcatcttatttttcaaaa-ctattcaattaggtcaattt-cagaaattatagattatgattattgagagatagt 41112074  T
Q  161 ctcacccttaccttagttttgcagaa 186  Q
    ||||||||||||||||||||||||||    
T  41112075 ctcacccttaccttagttttgcagaa 41112100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 32651563 - 32651627
Alignment:
Q  111 caattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 175  Q
    ||||||| ||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||    
T  32651563 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 32651627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 18712790 - 18712854
Alignment:
Q  111 caattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 175  Q
    ||||||| ||||||||||||||||||| | |||||||||| |||||||||||||||| |||||||    
T  18712790 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccatacctta 18712854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 120 - 175
Target Start/End: Complemental strand, 19663572 - 19663517
Alignment:
Q  120 caattttcagaaattatagattatgattattaagagatagtctcacccttacctta 175  Q
    |||||||||||||||||| | |||||||||  ||||||||||||||||||||||||    
T  19663572 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 19663517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 20805320 - 20805376
Alignment:
Q  119 tcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 175  Q
    ||||||||||||||||||| |||||||| ||| |||| ||| |||||||||||||||    
T  20805320 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 20805376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 175
Target Start/End: Original strand, 11158093 - 11158148
Alignment:
Q  120 caattttcagaaattatagattatgattattaagagatagtctcacccttacctta 175  Q
    |||||||||||||||||| |||| ||| ||| |||| |||||||||||||||||||    
T  11158093 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta 11158148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 173
Target Start/End: Complemental strand, 10811839 - 10811785
Alignment:
Q  119 tcaattttcagaaattatagattatgattattaagagatagtctcacccttacct 173  Q
    |||||||||||||||| || | ||| |||||| ||||||||||||||||||||||    
T  10811839 tcaattttcagaaattctacactattattattgagagatagtctcacccttacct 10811785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 176
Target Start/End: Complemental strand, 20851187 - 20851132
Alignment:
Q  121 aattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 176  Q
    ||||||||||||||||| ||||||| |||| | ||||| || ||||||||||||||    
T  20851187 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20851132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 176
Target Start/End: Complemental strand, 20857814 - 20857759
Alignment:
Q  121 aattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 176  Q
    ||||||||||||||||| ||||||| |||| | ||||| || ||||||||||||||    
T  20857814 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20857759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 21706276 - 21706331
Alignment:
Q  121 aattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 176  Q
    ||||||||||||||||| ||||||| |||| | ||||| || ||||||||||||||    
T  21706276 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 21706331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 21710818 - 21710873
Alignment:
Q  121 aattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 176  Q
    ||||||||||||||||| ||||||| |||| | ||||| || ||||||||||||||    
T  21710818 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 21710873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 103; Significance: 2e-51; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 10986339 - 10986170
Alignment:
Q  17 acatcacattacaaacagaattaacatgaccagtaccatttcccgtcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaatt 115  Q
    |||| ||||||||| |||||||||||||| || ||||  ||||| |||||||| ||||||| |||||||||||||||||| |||||||||||||||||||    
T  10986339 acattacattacaa-cagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaatt 10986241  T
Q  116 aggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaa 186  Q
    ||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||  ||||||||    
T  10986240 aggtcaatttttagaaattatagattatgattattgaaagatagtctcacccttaccttagaattgcagaa 10986170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 4477754 - 4477912
Alignment:
Q  17 acatcacattacaaacagaattaacatgaccagtaccatttcccgtcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaatt 115  Q
    |||| ||||||||| |||||||| ||||| || ||||  ||||| |||||||| ||||||| ||||||||| |||||||| |||||||||||||||||||    
T  4477754 acattacattacaa-cagaattagcatgatcaatacccattcccctcagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaatt 4477852  T
Q  116 aggtcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 175  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4477853 aggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 4477912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 23839095 - 23839253
Alignment:
Q  17 acatcacattacaaacagaattaacatgaccagtaccatttcccgtcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaatt 115  Q
    |||| ||||||||| |||||||||||||| || ||||  ||||| | |||||| ||||||| |||||||||||||||||| ||||||| |||||||||||    
T  23839095 acattacattacaa-cagaattaacatgatcaatacccattccccttagaatcatcatcaaaccctaaccctcaatttatcttccaaacactatgcaatt 23839193  T
Q  116 aggtcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 175  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  23839194 aggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 23839253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 33 - 186
Target Start/End: Complemental strand, 29614291 - 29614136
Alignment:
Q  33 agaattaacatgaccagtacc-atttcccgtcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcaga 130  Q
    ||||||||||||| || |||| ||||||| ||| |||| ||||||| ||||||||||||||||||||| | |||| ||||||| ||||||||||||||||    
T  29614291 agaattaacatgatcattacccatttcccttcataatcatcatcaaaccctaaccctcaatttatttttccaaaattatgcaactaggtcaattttcaga 29614192  T
Q  131 aattatagattatgattattaagagatagtctcacccttaccttagttttgcagaa 186  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  29614191 aattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 29614136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 18800334 - 18800503
Alignment:
Q  17 acatcacattacaaacagaattaacatgaccagtaccatttcccgtcagaatcgtcatcaa-ccctaaccctcaatt-tattttccaaaaactatgcaat 114  Q
    |||||||||||||| |||||||||||||| || |||   |||||  ||||||| ||||||| ||||||||||||||| |||||||| ||||||| |||||    
T  18800334 acatcacattacaa-cagaattaacatgatcattactcattccctccagaatcatcatcaaaccctaaccctcaattctattttcc-aaaactaagcaat 18800431  T
Q  115 taggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaa 186  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  18800432 taggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacattagttttgcagaa 18800503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 33 - 175
Target Start/End: Original strand, 23057850 - 23057993
Alignment:
Q  33 agaattaacatgaccagtacc-atttcccgtcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcaga 130  Q
    ||||||||||||| || |||| ||||||| |||||||| ||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||     
T  23057850 agaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaattttcagg 23057948  T
Q  131 aattatagattatgattattaagagatagtctcacccttacctta 175  Q
    |||||||||||||||||||  ||||||||||||||||||||||||    
T  23057949 aattatagattatgattatcgagagatagtctcacccttacctta 23057993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 56 - 186
Target Start/End: Complemental strand, 930215 - 930085
Alignment:
Q  56 ttcccgtcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaaga 154  Q
    ||||| |||||| | ||||||| ||||||||||||||||||||| ||||| |||| |||||||||||||||||||||| ||||||||||||||||| |||    
T  930215 ttcccttcagaaacatcatcaaaccctaaccctcaatttatttttcaaaa-ctatacaattaggtcaattttcagaaactatagattatgattattgaga 930117  T
Q  155 gatagtctcacccttaccttagttttgcagaa 186  Q
    ||||||||||||||||||||||||||||||||    
T  930116 gatagtctcacccttaccttagttttgcagaa 930085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 62 - 186
Target Start/End: Original strand, 12168305 - 12168428
Alignment:
Q  62 tcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagt 160  Q
    |||||||| ||||||| |||||||  |||  ||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  12168305 tcagaatcatcatcaaaccctaactttcatcttattttccaaaa-ctattcaattaggtcaattt-cagaaattatagattatgattattgagagatagt 12168402  T
Q  161 ctcacccttaccttagttttgcagaa 186  Q
    ||||||||||||||||||||||||||    
T  12168403 ctcacccttaccttagttttgcagaa 12168428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 62 - 186
Target Start/End: Original strand, 19287214 - 19287337
Alignment:
Q  62 tcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagt 160  Q
    |||||||| ||||||| |||||||  |||  ||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  19287214 tcagaatcatcatcaaaccctaactttcatcttattttccaaaa-ctattcaattaggtcaattt-cagaaattatagattatgattattgagagatagt 19287311  T
Q  161 ctcacccttaccttagttttgcagaa 186  Q
    ||||||||||||||||||||||||||    
T  19287312 ctcacccttaccttagttttgcagaa 19287337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 62 - 186
Target Start/End: Complemental strand, 19785982 - 19785859
Alignment:
Q  62 tcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagt 160  Q
    |||||||| ||||||| |||||||  ||| |||||||||||||| |||| ||| ||||||||||| |||||||||||||||||||||||| |||||||||    
T  19785982 tcagaatcatcatcaaaccctaactttcattttattttccaaaa-ctattcaactaggtcaattt-cagaaattatagattatgattattgagagatagt 19785885  T
Q  161 ctcacccttaccttagttttgcagaa 186  Q
    ||||||||||||||||||||||||||    
T  19785884 ctcacccttaccttagttttgcagaa 19785859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 62 - 186
Target Start/End: Original strand, 19878398 - 19878521
Alignment:
Q  62 tcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagt 160  Q
    |||||||| ||||||| |||||||  |||  ||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  19878398 tcagaatcatcatcaaaccctaactttcatcttattttccaaaa-ctattcaattaggtcaattt-cagaaattatagattatgattattgagagatagt 19878495  T
Q  161 ctcacccttaccttagttttgcagaa 186  Q
    ||||||||||||||||||||||||||    
T  19878496 ctcacccttaccttagttttgcagaa 19878521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 62 - 186
Target Start/End: Original strand, 19884174 - 19884297
Alignment:
Q  62 tcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagt 160  Q
    |||||||| ||||||| |||||||  |||  ||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  19884174 tcagaatcatcatcaaaccctaactttcatcttattttccaaaa-ctattcaattaggtcaattt-cagaaattatagattatgattattgagagatagt 19884271  T
Q  161 ctcacccttaccttagttttgcagaa 186  Q
    |||||||| |||||||||||||||||    
T  19884272 ctcaccctaaccttagttttgcagaa 19884297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 92 - 176
Target Start/End: Complemental strand, 34640069 - 34639986
Alignment:
Q  92 ttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 176  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  34640069 ttattttccaaaa-ctattcaattaggtcaattttcagaaattatagattaagattattgagagatagtctcacccttaccttag 34639986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 92 - 176
Target Start/End: Complemental strand, 34646743 - 34646660
Alignment:
Q  92 ttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 176  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  34646743 ttattttccaaaat-tattcaattaggtcaattttcagaaattatagattaagattattgagagatagtctcacccttaccttag 34646660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 92 - 176
Target Start/End: Complemental strand, 25469785 - 25469704
Alignment:
Q  92 ttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 176  Q
    ||||||||||||| | || ||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  25469785 ttattttccaaaacc-attcaattaggtcaattt-cagaa-ttatagattatgattattgagagatagtctcacccttaccttag 25469704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 120 - 186
Target Start/End: Complemental strand, 24512899 - 24512833
Alignment:
Q  120 caattttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaa 186  Q
    |||||||||||||||||| | |||||||||| ||||||||||||||||| ||||||| |||||||||    
T  24512899 caattttcagaaattatatactatgattattgagagatagtctcaccctcaccttagatttgcagaa 24512833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 31252406 - 31252478
Alignment:
Q  104 aactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 176  Q
    |||||| ||||||| | ||||||||||||||||| ||||| || ||||| ||||| |||||||||||||||||    
T  31252406 aactattcaattagattaattttcagaaattatatattataatcattaaaagataatctcacccttaccttag 31252478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 175
Target Start/End: Original strand, 9187498 - 9187550
Alignment:
Q  123 ttttcagaaattatagattatgattattaagagatagtctcacccttacctta 175  Q
    ||||||||||||||  |||| ||||||| ||||||||||||||||||||||||    
T  9187498 ttttcagaaattatgtattaagattattgagagatagtctcacccttacctta 9187550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 25348486 - 25348542
Alignment:
Q  119 tcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 175  Q
    |||||||||||||||| || | ||| |||||| ||||||||||||||||||||||||    
T  25348486 tcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 25348542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 173
Target Start/End: Complemental strand, 21565367 - 21565214
Alignment:
Q  20 tcacattacaaacagaattaacatgaccagtaccatttcccgtcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaattagg 118  Q
    ||||||||||| || ||||||||||| || ||||  ||||| | |||||| ||||||| |||||||||||||||| | | |  ||   || |||||||||    
T  21565367 tcacattacaa-cataattaacatgatcattacccattccccttagaatcatcatcaaaccctaaccctcaattt-tatcctcaaggttaagcaattagg 21565270  T
Q  119 tcaattttcagaaattatagattatg-attattaagagatagtctcacccttacct 173  Q
    ||||||||| ||||||| | |||||  |||| | ||||||||||||||||||||||    
T  21565269 tcaattttccgaaattaaatattatctattaatgagagatagtctcacccttacct 21565214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 173
Target Start/End: Original strand, 25598643 - 25598697
Alignment:
Q  119 tcaattttcagaaattatagattatgattattaagagatagtctcacccttacct 173  Q
    |||||||||||||| |||| |||||||| ||| |||| |||||||||||||||||    
T  25598643 tcaattttcagaaaatatatattatgatcattgagagttagtctcacccttacct 25598697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 25397172 - 25397228
Alignment:
Q  119 tcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 175  Q
    ||||||||||||||||||| |||||||| ||  |||| ||| |||||||||||||||    
T  25397172 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacctta 25397228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 19471391 - 19471335
Alignment:
Q  119 tcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 175  Q
    ||||||| ||||||||||| |||||||| ||  |||| ||| |||||||||||||||    
T  19471391 tcaatttccagaaattatatattatgatcatcgagaggtagcctcacccttacctta 19471335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 103; Significance: 2e-51; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 37 - 186
Target Start/End: Original strand, 26583744 - 26583892
Alignment:
Q  37 ttaacatgaccagtaccatttcccgtcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcagaaatta 135  Q
    ||||||||| || |||| |||||| |||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  26583744 ttaacatgatcattaccctttcccctcagaatcatcatcaagccctaaccctcaatttattttccaaaa-ctatgcaattaggtcaattt-cagaaatta 26583841  T
Q  136 tagattatgattattaagagatagtctcacccttaccttagttttgcagaa 186  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  26583842 tagattatgattattgagagatagtctcacccttaccttagttttgcagaa 26583892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 30 - 175
Target Start/End: Original strand, 6483627 - 6483772
Alignment:
Q  30 aacagaattaacatgaccagtaccatttcccgtcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttca 128  Q
    |||||||||||||||| || ||||  ||||| ||| |||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  6483627 aacagaattaacatgatcaatacccattcccctcaaaatcatcatcaaaccctaaccctcaatttattttccaaaa-ctatgcaattaggtcaattttca 6483725  T
Q  129 gaaattatagattatgattattaagagatagtctcacccttacctta 175  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  6483726 gaaattatagattatgattattgagagatagtctcacccttacctta 6483772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 30 - 175
Target Start/End: Original strand, 6487094 - 6487239
Alignment:
Q  30 aacagaattaacatgaccagtaccatttcccgtcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttca 128  Q
    |||||||||||||||| || ||||  ||||| ||| |||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  6487094 aacagaattaacatgatcaatacccattcccctcaaaatcatcatcaaaccctaaccctcaatttattttccaaaa-ctatgcaattaggtcaattttca 6487192  T
Q  129 gaaattatagattatgattattaagagatagtctcacccttacctta 175  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  6487193 gaaattatagattatgattattgagagatagtctcacccttacctta 6487239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 19661611 - 19661454
Alignment:
Q  17 acatcacattacaaacagaattaacatgaccagtaccatttcccgtcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaatt 115  Q
    |||| ||||||||| |||||||||||||| || ||||  ||||| |||||||| ||||||| |||||||||||||||||| |||||||| ||||||||||    
T  19661611 acattacattacaa-cagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaatt 19661514  T
Q  116 aggtcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 175  Q
    ||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||    
T  19661513 aggtcaattttcagaaattatagattatgattatcgagagaaagtctcacccttacctta 19661454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 92 - 176
Target Start/End: Complemental strand, 5706106 - 5706023
Alignment:
Q  92 ttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 176  Q
    ||||||| |||||||||| ||||||||||||||| ||| |||||||||||||||||| | |||||||||||||||||||||||||    
T  5706106 ttatttttcaaaaactattcaattaggtcaattt-caggaattatagattatgattaatgagagatagtctcacccttaccttag 5706023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 72 - 175
Target Start/End: Original strand, 23265093 - 23265197
Alignment:
Q  72 catcaaccctaaccctcaatttat-tttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcaccctta 170  Q
    ||||||||||||  |||||||| | ||| ||| ||| || ||||||| ||||||||||||||||||| | |||||||||| |||||||||||||||||||    
T  23265093 catcaaccctaattctcaatttttattttcaagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcaccctta 23265192  T
Q  171 cctta 175  Q
    |||||    
T  23265193 cctta 23265197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 72 - 175
Target Start/End: Original strand, 23280161 - 23280265
Alignment:
Q  72 catcaaccctaaccctcaatttat-tttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcaccctta 170  Q
    ||||||||||||  |||||||| | ||| ||| ||| || ||||||| ||||||||||||||||||| | |||||||||| |||||||||||||||||||    
T  23280161 catcaaccctaattctcaatttttattttcaagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcaccctta 23280260  T
Q  171 cctta 175  Q
    |||||    
T  23280261 cctta 23280265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 72 - 175
Target Start/End: Original strand, 21908311 - 21908414
Alignment:
Q  72 catcaaccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttac 171  Q
    |||||||||||| || ||||||  | ||||| ||| ||  | |||| ||||||||||||||||||| || ||||||||| ||||||||||||||||||||    
T  21908311 catcaaccctaatccccaattttatatccaagaacaatatacttagatcaattttcagaaattatatatcatgattattgagagatagtctcacccttac 21908410  T
Q  172 ctta 175  Q
    ||||    
T  21908411 ctta 21908414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 17 - 173
Target Start/End: Original strand, 23878905 - 23879060
Alignment:
Q  17 acatcacattacaaacagaattaacatgaccagtaccat-ttcccgtcagaatcgtcatcaaccctaaccctcaatttattttccaaaaactatgcaatt 115  Q
    |||||||||||||| || ||||||||||| || ||||   ||||| |||||||| ||| |||||||||||||||||||| |   |||    || ||||||    
T  23878905 acatcacattacaa-cataattaacatgatcattaccccattcccctcagaatcatcaacaaccctaaccctcaatttaatcctcaaggt-taagcaatt 23879002  T
Q  116 aggtcaattttcagaaattatagattatgattattaagagatagtctcacccttacct 173  Q
    |||||||||||  ||||||||| || || |||| | ||||||||||||||||||||||    
T  23879003 aggtcaatttttcgaaattatatataattattaatgagagatagtctcacccttacct 23879060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 175
Target Start/End: Complemental strand, 23101618 - 23101463
Alignment:
Q  20 tcacattacaaacagaattaacatgaccagtaccatttcccgtcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaattagg 118  Q
    ||||||||||| || ||||||||||| || ||||  ||||| |||||||| ||||||| |||||||||||||||| | | |  ||   ||  ||||||||    
T  23101618 tcacattacaa-cataattaacatgatcattacccattcccctcagaatcatcatcaaaccctaaccctcaattt-tatcctcaaggttaaacaattagg 23101521  T
Q  119 tcaattttcagaaattatagattatg-attattaagagatagtctcacccttacctta 175  Q
    ||||||||| ||||||| | |||||  |||| | ||||||||||||||||||||||||    
T  23101520 tcaattttccgaaattacatattatctattaatgagagatagtctcacccttacctta 23101463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 77 - 185
Target Start/End: Original strand, 26885139 - 26885246
Alignment:
Q  77 accctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 176  Q
    |||||||  |||||||| || ||||| |||||| | ||||| | ||||||||||||||||| |||| ||||||| | ||||| || ||||||||||||||    
T  26885139 accctaattctcaattttttctccaagaactattccattagattaattttcagaaattatacatta-gattattgaaagataatcccacccttaccttag 26885237  T
Q  177 ttttgcaga 185  Q
      |||||||    
T  26885238 aattgcaga 26885246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 173
Target Start/End: Complemental strand, 23089210 - 23089057
Alignment:
Q  20 tcacattacaaacagaattaacatgaccagtaccatttcccgtcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaattagg 118  Q
    ||||||||||| || ||||||||||| || ||||  ||||| | |||||| ||||||| |||||||||||||||| | | |  ||   || |||||||||    
T  23089210 tcacattacaa-cataattaacatgatcattacccattccccttagaatcatcatcaaaccctaaccctcaattt-tatcctcaaggttaagcaattagg 23089113  T
Q  119 tcaattttcagaaattatagattatg-attattaagagatagtctcacccttacct 173  Q
    ||||||||| ||||||| | |||||  |||| | ||||||||||||||||||||||    
T  23089112 tcaattttccgaaattaaatattatctattaatgagagatagtctcacccttacct 23089057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 24661576 - 24661632
Alignment:
Q  119 tcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 175  Q
    ||||||||||||||||||| |||||||| ||  |||| ||| |||||||||||||||    
T  24661576 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacctta 24661632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 10577 - 10632
Alignment:
Q  121 aattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 176  Q
    ||||||||||||||||| ||||||| |||| | ||||| || ||||||||||||||    
T  10577 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 10632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 176
Target Start/End: Complemental strand, 25180984 - 25180929
Alignment:
Q  121 aattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 176  Q
    ||||||||||||||||| ||||||| |||| | ||||| || ||||||||||||||    
T  25180984 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 25180929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 17 - 176
Target Start/End: Complemental strand, 10354 - 10195
Alignment:
Q  17 acatcacattacaaacagaattaacatgaccagtaccatttcccgtcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaatt 115  Q
    |||| ||||||||| |||||||||||||| || ||||  ||||| |||||||| ||||||| ||||||||| |||||||| |||||||||||||||||||    
T  10354 acattacattacaa-cagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaatt 10256  T
Q  116 aggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 176  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  10255 aggtcaattttcagaaattatagattatgattattgagagatagtcccacccttaccttag 10195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 17 - 176
Target Start/End: Complemental strand, 1684 - 1525
Alignment:
Q  17 acatcacattacaaacagaattaacatgaccagtaccatttcccgtcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaatt 115  Q
    |||| ||||||||| |||||||||||||| || ||||  ||||| |||||||| ||||||| ||||||||| |||||||| |||||||||||||||||||    
T  1684 acattacattacaa-cagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaatt 1586  T
Q  116 aggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 176  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  1585 aggtcaattttcagaaattatagattatgattattgagagatagtcccacccttaccttag 1525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 33 - 186
Target Start/End: Original strand, 111793 - 111948
Alignment:
Q  33 agaattaacatgaccagtacc-atttcccgtcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaatttt-cag 129  Q
    ||||||||||||| || |||| ||||||| |||||||| ||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| |||    
T  111793 agaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaatttttcag 111891  T
Q  130 aaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaa 186  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  111892 aaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 111948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 11238 - 11407
Alignment:
Q  17 acatcacattacaaacagaattaacatgaccagtaccatttcccgtcagaatcgtcatcaa-ccctaaccctcaatt-tattttccaaaaactatgcaat 114  Q
    |||||||||||||| |||||||||||||| || |||   |||||  ||||||| ||||||| ||||||||||||||| |||||||| ||||||| |||||    
T  11238 acatcacattacaa-cagaattaacatgatcattactcattccctccagaatcatcatcaaaccctaaccctcaattctattttcc-aaaactaagcaat 11335  T
Q  115 taggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaa 186  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  11336 taggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 11407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 100; Significance: 1e-49; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 30 - 176
Target Start/End: Original strand, 44477532 - 44477678
Alignment:
Q  30 aacagaattaacatgaccagtaccatttcccgtcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttca 128  Q
    |||||||||||||||| || ||||  ||||| ||| |||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  44477532 aacagaattaacatgatcaatacccattcccctcaaaatcatcatcaaaccctaaccctcaatttattttccaaaa-ctatgcaattaggtcaattttca 44477630  T
Q  129 gaaattatagattatgattattaagagatagtctcacccttaccttag 176  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||    
T  44477631 gaaattatagattatgattattgagagatagtctcacccttaccttag 44477678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 30 - 176
Target Start/End: Original strand, 44492690 - 44492836
Alignment:
Q  30 aacagaattaacatgaccagtaccatttcccgtcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttca 128  Q
    |||||||||||||||| || ||||  ||||| ||| |||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  44492690 aacagaattaacatgatcaatacccattcccctcaaaatcatcatcaaaccctaaccctcaatttattttccaaaa-ctatgcaattaggtcaattttca 44492788  T
Q  129 gaaattatagattatgattattaagagatagtctcacccttaccttag 176  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||    
T  44492789 gaaattatagattatgattattgagagatagtctcacccttaccttag 44492836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 23866518 - 23866680
Alignment:
Q  24 attacaaacagaattaacatgaccagtacc-atttcccgtcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaattaggtca 121  Q
    |||||||| ||||||||||||| || |||| ||||| | ||| |||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  23866518 attacaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaa-ctatgcaattaggtca 23866616  T
Q  122 attttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaa 186  Q
    |||| ||| ||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  23866617 attt-caggaattataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 23866680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 17 - 173
Target Start/End: Complemental strand, 8727891 - 8727735
Alignment:
Q  17 acatcacattacaaacagaattaacatgaccagtaccatttcccgtcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaatt 115  Q
    |||| ||||||||| |||||||||||||| || ||||  | ||| |||||||| || |||| |||||||||||||||||| |||||||||||||||||||    
T  8727891 acattacattacaa-cagaattaacatgatcaatacccatacccctcagaatcatcgtcaaaccctaaccctcaatttatcttccaaaaactatgcaatt 8727793  T
Q  116 aggtcaattttcagaaattatagattatgattattaagagatagtctcacccttacct 173  Q
    ||||||||||||||||||||||||||||||||||| || |||| ||||||||||||||    
T  8727792 aggtcaattttcagaaattatagattatgattattgagggataatctcacccttacct 8727735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 62 - 186
Target Start/End: Original strand, 17054533 - 17054656
Alignment:
Q  62 tcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagt 160  Q
    |||||||| ||||||| |||||||  |||  ||||||||||||| |||| ||||||||||||||| ||| |||||||||||||||||||| |||||||||    
T  17054533 tcagaatcatcatcaaaccctaactttcatcttattttccaaaa-ctattcaattaggtcaattt-caggaattatagattatgattattgagagatagt 17054630  T
Q  161 ctcacccttaccttagttttgcagaa 186  Q
    |||||||||||||| |||||||||||    
T  17054631 ctcacccttaccttggttttgcagaa 17054656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 23482117 - 23482053
Alignment:
Q  111 caattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 175  Q
    ||||||| ||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||    
T  23482117 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23482053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 18614271 - 18614327
Alignment:
Q  119 tcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 175  Q
    ||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||    
T  18614271 tcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18614327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 186
Target Start/End: Complemental strand, 14056619 - 14056553
Alignment:
Q  120 caattttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaa 186  Q
    |||||||||||| ||| | | ||| |||||| ||||||||||||||||||||||||| |||||||||    
T  14056619 caattttcagaatttacatactattattattgagagatagtctcacccttaccttagatttgcagaa 14056553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 39364919 - 39364975
Alignment:
Q  119 tcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 175  Q
    |||||||||||||||| || | ||| |||||| ||||||||||||||||||||||||    
T  39364919 tcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 39364975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 120 - 186
Target Start/End: Original strand, 25111976 - 25112042
Alignment:
Q  120 caattttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaa 186  Q
    |||||||||||| ||| | | ||| |||||| ||||||||||||||||||||||||| |||| ||||    
T  25111976 caattttcagaatttacatactattattattgagagatagtctcacccttaccttagatttgtagaa 25112042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 175
Target Start/End: Complemental strand, 29643440 - 29643386
Alignment:
Q  121 aattttcagaaattatagattatgattattaagagatagtctcacccttacctta 175  Q
    ||||||||||||||| | |||||||||||| | ||||| ||||||||||||||||    
T  29643440 aattttcagaaattacatattatgattattgaaagataatctcacccttacctta 29643386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 176
Target Start/End: Complemental strand, 24320725 - 24320670
Alignment:
Q  121 aattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 176  Q
    ||||||||||||||||| ||||||| |||| | ||||| || ||||||||||||||    
T  24320725 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 24320670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 120 - 187
Target Start/End: Complemental strand, 27940907 - 27940840
Alignment:
Q  120 caattttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaat 187  Q
    |||||||||||||| ||| ||||| || ||| |  | ||| |||||||||||||||||||||||||||    
T  27940907 caattttcagaaatcatatattataatcattgaaggttagcctcacccttaccttagttttgcagaat 27940840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 21931696 - 21931752
Alignment:
Q  119 tcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 175  Q
    ||||||||||||| ||||| ||||| || ||| |||| ||| |||||||||||||||    
T  21931696 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacctta 21931752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 97; Significance: 7e-48; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 35 - 186
Target Start/End: Original strand, 206 - 356
Alignment:
Q  35 aattaacatgaccagtaccatttcccgtcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcagaaat 133  Q
    ||||||||||| || ||||  ||||| |||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  206 aattaacatgatcattacccattcccctcagaatcatcatcaaaccctaaccctcaatttattttccaaaa-ctatgcaattaggtcaattt-cagaaat 303  T
Q  134 tatagattatgattattaagagatagtctcacccttaccttagttttgcagaa 186  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  304 tatagattatggttattgagagatagtctcacccttaccttagttttgcagaa 356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 33 - 183
Target Start/End: Original strand, 1090 - 1240
Alignment:
Q  33 agaattaacatgaccagtacc-atttcccgtcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcaga 130  Q
    ||||||||||||| || |||| ||||||| ||| |||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||     
T  1090 agaattaacatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttattttccaaaa-ctatgcaattaggtcaattt-cagg 1187  T
Q  131 aattatagattatgattattaagagatagtctcacccttaccttagttttgca 183  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  1188 aattatagattatgattattgagagatagtctcacccttaccttagttttgca 1240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 33 - 183
Target Start/End: Original strand, 50091 - 50241
Alignment:
Q  33 agaattaacatgaccagtacc-atttcccgtcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcaga 130  Q
    ||||||||||||| || |||| ||||||| ||| |||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||     
T  50091 agaattaacatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttattttccaaaa-ctatgcaattaggtcaattt-cagg 50188  T
Q  131 aattatagattatgattattaagagatagtctcacccttaccttagttttgca 183  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  50189 aattatagattatgattattgagagatagtctcacccttaccttagttttgca 50241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 2e-42; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 52 - 186
Target Start/End: Complemental strand, 8045955 - 8045822
Alignment:
Q  52 ccatttcccgtcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattatt 150  Q
    ||||||||| |||||||  || |||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||     
T  8045955 ccatttcccttcagaattctcgtcaaaccctaaccctcaatttattttccaaaa-ctatgcaattaggtcaattt-cagaaattatagattatgattatc 8045858  T
Q  151 aagagatagtctcacccttaccttagttttgcagaa 186  Q
     |||||||||||||||||||||||||||||||||||    
T  8045857 gagagatagtctcacccttaccttagttttgcagaa 8045822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 62 - 186
Target Start/End: Original strand, 11848049 - 11848179
Alignment:
Q  62 tcagaatcgtcatcaa-ccctaaccctcaatttattttcca-----aaaactatgcaattaggtcaattttcagaaattatagattatgattattaagag 155  Q
    |||||||||||||||| ||||||||||||||| |||||        |||||||||| | ||||||||||||||| |||||||||||||||||||| ||||    
T  11848049 tcagaatcgtcatcaaaccctaaccctcaattgattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagag 11848148  T
Q  156 atagtctcacccttaccttagttttgcagaa 186  Q
    |||||||||||||||||||||||||||||||    
T  11848149 atagtctcacccttaccttagttttgcagaa 11848179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 92 - 176
Target Start/End: Original strand, 53483677 - 53483760
Alignment:
Q  92 ttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 176  Q
    ||||||| |||||||||| ||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  53483677 ttatttttcaaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttag 53483760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 120 - 186
Target Start/End: Original strand, 15408139 - 15408205
Alignment:
Q  120 caattttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaa 186  Q
    |||||||||||||||||| | |||||||||| ||||||||||||||||||||||||| | |||||||    
T  15408139 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatctgcagaa 15408205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 8834895 - 8834951
Alignment:
Q  119 tcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 175  Q
    ||||||||||||||||||| |||||||| ||| |||| ||| |||||||||||||||    
T  8834895 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 8834951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 13888641 - 13888697
Alignment:
Q  119 tcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 175  Q
    ||||||||||||||||||| |||||||| ||| |||| ||| |||||||||||||||    
T  13888641 tcaattttcagaaattatacattatgatcattgagagttagcctcacccttacctta 13888697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 173
Target Start/End: Original strand, 14486661 - 14486713
Alignment:
Q  121 aattttcagaaattatagattatgattattaagagatagtctcacccttacct 173  Q
    ||||||||||||||||| |||||||| ||| |  |||||||||||||||||||    
T  14486661 aattttcagaaattatatattatgatcattgaaggatagtctcacccttacct 14486713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 15245215 - 15245271
Alignment:
Q  119 tcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 175  Q
    ||||||||||||||||||| |||| ||| ||| |||| ||| |||||||||||||||    
T  15245215 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttacctta 15245271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 170
Target Start/End: Complemental strand, 22724742 - 22724691
Alignment:
Q  119 tcaattttcagaaattatagattatgattattaagagatagtctcaccctta 170  Q
    |||||||||||||||| || | ||| |||||| |||||||||||||||||||    
T  22724742 tcaattttcagaaattctatactattattattgagagatagtctcaccctta 22724691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 15747592 - 15747551
Alignment:
Q  140 ttatgattattaagagatagtctcacccttaccttagttttg 181  Q
    |||| |||||| |||| |||||||||||||||||||||||||    
T  15747592 ttataattattgagagttagtctcacccttaccttagttttg 15747551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 15308120 - 15308176
Alignment:
Q  119 tcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 175  Q
    ||||||||||||||||||| |||| ||| ||| |||| ||| |||||||||| ||||    
T  15308120 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttaactta 15308176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 102 - 186
Target Start/End: Original strand, 30839 - 30923
Alignment:
Q  102 aaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaa 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  30839 aaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 30923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 76 - 186
Target Start/End: Complemental strand, 1997 - 1887
Alignment:
Q  76 aaccctaaccctcaatttattttccaaaaactatgcaattaggtcaatttt-cagaaattatagattatgattattaagagatagtctcacccttacctt 174  Q
    ||||||||||||||| ||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||    
T  1997 aaccctaaccctcaaattattttccaaaa-ctatacaattaggtcaatttttcagaaattatagattatgattattgagatatagtctcacccttacctt 1899  T
Q  175 agttttgcagaa 186  Q
    ||||||||||||    
T  1898 agttttgcagaa 1887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 76 - 186
Target Start/End: Complemental strand, 8674 - 8564
Alignment:
Q  76 aaccctaaccctcaatttattttccaaaaactatgcaattaggtcaatttt-cagaaattatagattatgattattaagagatagtctcacccttacctt 174  Q
    ||||||||||||||| ||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||    
T  8674 aaccctaaccctcaaattattttccaaaa-ctatacaattaggtcaatttttcagaaattatagattatgattattgagatatagtctcacccttacctt 8576  T
Q  175 agttttgcagaa 186  Q
    ||||||||||||    
T  8575 agttttgcagaa 8564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 68; Significance: 1e-30; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 105 - 180
Target Start/End: Original strand, 916 - 991
Alignment:
Q  105 actatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttagtttt 180  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  916 actatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagtttt 991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 105 - 180
Target Start/End: Original strand, 8061 - 8136
Alignment:
Q  105 actatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttagtttt 180  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  8061 actatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagtttt 8136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 65; Significance: 9e-29; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 62 - 181
Target Start/End: Complemental strand, 1845 - 1727
Alignment:
Q  62 tcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagt 160  Q
    |||||||| ||||||| |||||||  |||  ||||||||||||| |||| ||||||||||||||| ||| |||||||||||||||||||| |||||||||    
T  1845 tcagaatcatcatcaaaccctaactttcatattattttccaaaa-ctattcaattaggtcaattt-caggaattatagattatgattattgagagatagt 1748  T
Q  161 ctcacccttaccttagttttg 181  Q
    |||||||||||||||||||||    
T  1747 ctcacccttaccttagttttg 1727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 62 - 181
Target Start/End: Complemental strand, 5868 - 5750
Alignment:
Q  62 tcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagt 160  Q
    |||||||| ||||||| |||||||  |||  ||||||||||||| |||| ||||||||||||||| ||| |||||||||||||||||||| |||||||||    
T  5868 tcagaatcatcatcaaaccctaactttcatattattttccaaaa-ctattcaattaggtcaattt-caggaattatagattatgattattgagagatagt 5771  T
Q  161 ctcacccttaccttagttttg 181  Q
    |||||||||||||||||||||    
T  5770 ctcacccttaccttagttttg 5750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 63; Significance: 1e-27; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 92 - 182
Target Start/End: Complemental strand, 45357 - 45268
Alignment:
Q  92 ttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgc 182  Q
    ||||||| |||||||||| ||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  45357 ttatttttcaaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttagatttgc 45268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 120 - 186
Target Start/End: Complemental strand, 40587 - 40521
Alignment:
Q  120 caattttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaa 186  Q
    |||||||||||||||||| | |||||||||| ||||||||||||||||||||||||| |||||||||    
T  40587 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgcagaa 40521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 16811 - 16875
Alignment:
Q  111 caattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 175  Q
    ||||||| ||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||    
T  16811 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 16875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 116887 - 116951
Alignment:
Q  111 caattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 175  Q
    ||||||| ||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||    
T  116887 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 116951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 186
Target Start/End: Original strand, 17643 - 17710
Alignment:
Q  120 caattttcagaaattatagattatgattattaagagatagtctcacccttaccttag-ttttgcagaa 186  Q
    |||||||||||||||||| |||||| ||||| ||||||||||||||||||||||||| ||||||||||    
T  17643 caattttcagaaattatacattatggttattgagagatagtctcacccttaccttagattttgcagaa 17710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 120 - 186
Target Start/End: Original strand, 135473 - 135539
Alignment:
Q  120 caattttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaa 186  Q
    |||||||||||||||||| | |||||||||| ||||||||||||||||||||||||| ||| |||||    
T  135473 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagattttcagaa 135539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 72 - 8
Alignment:
Q  111 caattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 175  Q
    ||||||| ||||||||||||||||||  |||| ||||||| ||||||||||||||||||||||||    
T  72 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 8  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 122 - 186
Target Start/End: Complemental strand, 22646 - 22582
Alignment:
Q  122 attttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaa 186  Q
    |||||||||||||||| | |||||||||| ||||||||||||||||||||||| | |||||||||    
T  22646 attttcagaaattatatactatgattattgagagatagtctcacccttaccttggatttgcagaa 22582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 13623 - 13687
Alignment:
Q  111 caattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 175  Q
    ||||||| ||||||||||||||||||  |||| ||||||| ||||||||||||||||||||||||    
T  13623 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 13687  T

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Target: scaffold0020 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 101992 - 101928
Alignment:
Q  111 caattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 175  Q
    ||||||| ||||||||||| ||||||| | |||||||||| ||||||||||||||||||||||||    
T  101992 caattagatcaattttcaggaattatatactatgattattgagagatagtctcacccttacctta 101928  T

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Target: scaffold0476 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 17 - 173
Target Start/End: Complemental strand, 3452 - 3295
Alignment:
Q  17 acatcacattacaaacagaattaacatgac-cagtaccatttcccgtcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaat 114  Q
    |||||||||||||| || |||||||||||  || ||||  ||||| |||||||| ||||||| |||||||||||||||| | | || ||   || |||||    
T  3452 acatcacattacaa-caaaattaacatgattcattacccattcccctcagaatcatcatcaaaccctaaccctcaattt-tatccccaaggttaagcaat 3355  T
Q  115 taggtcaattttcagaaattatagattatg-attattaagagatagtctcacccttacct 173  Q
    ||||||||||||| ||||||| | |||||  |||| | ||||||||||||||||||||||    
T  3354 taggtcaattttccgaaattacatattatctattaatgagagatagtctcacccttacct 3295  T

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Target: scaffold0124 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 120 - 175
Target Start/End: Complemental strand, 34331 - 34276
Alignment:
Q  120 caattttcagaaattatagattatgattattaagagatagtctcacccttacctta 175  Q
    |||||||||||||||||| | |||||||||  ||||||||||||||||||||||||    
T  34331 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 34276  T

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Target: scaffold0815 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 186
Target Start/End: Original strand, 1453 - 1515
Alignment:
Q  124 tttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaa 186  Q
    |||||||||||||| |||| ||| ||| |||| ||||||||||||||||||| ||||||||||    
T  1453 tttcagaaattatacattaagatcattgagagttagtctcacccttaccttaattttgcagaa 1515  T

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Target: scaffold0077 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 173
Target Start/End: Complemental strand, 3780 - 3624
Alignment:
Q  17 acatcacattacaaacagaattaacatgaccagtaccatttcccgtcagaatcgtcatcaa-ccctaaccctcaatttattttccaaaaactatgcaatt 115  Q
    |||||||||||||| || ||||||||||| || ||||  | ||| |||||||| ||||||| |||||||||||||||| | | |  ||   || ||||||    
T  3780 acatcacattacaa-cataattaacatgatcattacccatccccctcagaatcatcatcaaaccctaaccctcaattt-tatcctcaaggttaagcaatt 3683  T
Q  116 aggtcaattttcagaaattatagattatg-attattaagagatagtctcacccttacct 173  Q
    |||||||||||| ||||||| | |||||  |||| | ||||||||||||||||||||||    
T  3682 aggtcaattttccgaaattacatattatctattaatgagagatagtctcacccttacct 3624  T

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Target: scaffold2054 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 186
Target Start/End: Original strand, 680 - 780
Alignment:
Q  86 ctcaatttattttccaaaaactatgcaattaggtcaatttt-cagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcag 184  Q
    |||||||||||||| || |||||| |  |||||| |||||| ||||||||||| |||| ||| ||| | ||||| || ||||||||||||||||||||||    
T  680 ctcaatttattttc-aagaactattcttttaggttaatttttcagaaattatatattaagatcattgaaagataatcccacccttaccttagttttgcag 778  T
Q  185 aa 186  Q
    ||    
T  779 aa 780  T

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Target: scaffold0138 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 12296 - 12352
Alignment:
Q  119 tcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 175  Q
    ||||||||||||||||||| |||||||| ||| |||| ||| |||||||||||||||    
T  12296 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 12352  T

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Target: scaffold0790 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 189
Target Start/End: Original strand, 5487 - 5522
Alignment:
Q  154 agatagtctcacccttaccttagttttgcagaataa 189  Q
    ||||||||||||||||||||||||||||||||||||    
T  5487 agatagtctcacccttaccttagttttgcagaataa 5522  T

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Target: scaffold0317 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 175
Target Start/End: Original strand, 1378 - 1441
Alignment:
Q  112 aattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 175  Q
    |||||| |||||||||| |||||||| || ||||| ||| | ||||||||||||||||||||||    
T  1378 aattagatcaattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta 1441  T

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Target: scaffold0139 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 175
Target Start/End: Complemental strand, 15052 - 14997
Alignment:
Q  120 caattttcagaaattatagattatgattattaagagatagtctcacccttacctta 175  Q
    |||||||||||||||||| |||| ||| ||| |||| |||||||||||||||||||    
T  15052 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta 14997  T

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Target: scaffold0001 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 185
Target Start/End: Complemental strand, 493105 - 493019
Alignment:
Q  98 tccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcaga 185  Q
    ||||| |||||| | ||||| | ||||||||||||||||| |||| ||||||| | ||||| |||||||||||||||||  |||||||    
T  493105 tccaagaactattccattagattaattttcagaaattatacatta-gattattgaaagataatctcacccttaccttagaattgcaga 493019  T

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Target: scaffold0261 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 23624 - 23559
Alignment:
Q  121 aattttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaa 186  Q
    ||||||||||||||||| |||||||| ||| | ||||| || ||||||||||||||  ||||||||    
T  23624 aattttcagaaattatacattatgatcattcaaagataatcccacccttaccttagaattgcagaa 23559  T

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Target: scaffold0609 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 176
Target Start/End: Complemental strand, 5929 - 5857
Alignment:
Q  104 aactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 176  Q
    |||||| ||||||| | ||||||||||||||||| ||||| || ||| | ||||| || ||||||||||||||    
T  5929 aactattcaattagattaattttcagaaattatatattataatcattgaaagataatcccacccttaccttag 5857  T

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Target: scaffold0096 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 39563 - 39503
Alignment:
Q  119 tcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttagttt 179  Q
    ||||||||| ||||||||| |||||||| ||| |||| ||| |||||||||||||| ||||    
T  39563 tcaattttctgaaattatatattatgatcattgagagttagcctcacccttacctttgttt 39503  T

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Target: scaffold0348 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 9336 - 9391
Alignment:
Q  121 aattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 176  Q
    ||||||||||||||||| ||||||| |||| | ||||| || ||||||||||||||    
T  9336 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 9391  T

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Target: scaffold0127 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 10239 - 10294
Alignment:
Q  121 aattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 176  Q
    ||||||||||||||| | ||||||||||||   ||||| |||||||||||||||||    
T  10239 aattttcagaaattacatattatgattattggaagataatctcacccttaccttag 10294  T

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Target: scaffold0023 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 135438 - 135493
Alignment:
Q  121 aattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 176  Q
    ||||||||||||||||| ||||||| |||| | ||||| |||||| ||||||||||    
T  135438 aattttcagaaattatatattatgactattgaaagataatctcacgcttaccttag 135493  T

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Target: scaffold1318 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 175
Target Start/End: Complemental strand, 1967 - 1913
Alignment:
Q  121 aattttcagaaattatagattatgattattaagagatagtctcacccttacctta 175  Q
    ||||||||||||||||| ||||||| |||| | ||||| || |||||||||||||    
T  1967 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 1913  T

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Target: scaffold0335 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 2684 - 2628
Alignment:
Q  119 tcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 175  Q
    ||||||||||||| ||||| ||||| || ||| |||| ||| |||||||||||||||    
T  2684 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacctta 2628  T

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Target: scaffold0249 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 176
Target Start/End: Complemental strand, 13970 - 13894
Alignment:
Q  101 aaaaactatgcaattaggtcaatttt-cagaaattatagattatgattattaagagatagtctcacccttaccttag 176  Q
    ||||||||| ||||||| | |||||| ||||||||||| ||||| || ||| | ||||| || ||||||||||||||    
T  13970 aaaaactattcaattagattaatttttcagaaattatatattataatcattgaaagataatcccacccttaccttag 13894  T

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Target: scaffold0003 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 189
Target Start/End: Complemental strand, 80321 - 80293
Alignment:
Q  161 ctcacccttaccttagttttgcagaataa 189  Q
    |||||||||||||||||||||||||||||    
T  80321 ctcacccttaccttagttttgcagaataa 80293  T

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Target: scaffold0003; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 189
Target Start/End: Complemental strand, 100043 - 100015
Alignment:
Q  161 ctcacccttaccttagttttgcagaataa 189  Q
    |||||||||||||||||||||||||||||    
T  100043 ctcacccttaccttagttttgcagaataa 100015  T

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