View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8206A_low_68 (Length: 294)
Name: NF8206A_low_68
Description: NF8206A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8206A_low_68 |
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Alignment Details
Target: chr3 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 1 - 274
Target Start/End: Complemental strand, 48623327 - 48623054
Alignment:
| Q |
1 |
tcagtttctaacagtagggaaatagttgcttgttaaacttagttagattcggaattgagtattgcattttttgtggagaaaaacgaaagatggatctgta |
100 |
Q |
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| T |
48623327 |
tcagtttctaacagtagggaaatagttgcttgttaaacttagttagattcggaattgagtattgcattttttgtggagaaaaacgaaagatggatctgta |
48623228 |
T |
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| Q |
101 |
tattaagctcgggcaacttagtaatcactgcagtgttttcttcatgataaatatttgttttgtaggcatatttcatcacgaatatggaacctataaagtt |
200 |
Q |
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| T |
48623227 |
tattaagctcgggcaacttagtaatcactgcagtgttttcttcatgataaatatttgttttgtaggcatatttcatcacgaatatggaacctataaagtt |
48623128 |
T |
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| Q |
201 |
ttgggagttcatgtctctaattttggaaggtcttggatatcaaaggtgatttcttttgtactgttaaccattag |
274 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48623127 |
ttgggagttcatgtctctaattttggaaggtcttggatatcaaaggtgatttcttttgtactgttaaccattag |
48623054 |
T |
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