View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8206_high_3 (Length: 264)
Name: NF8206_high_3
Description: NF8206
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8206_high_3 |
 | |
|
| [»] scaffold0236 (1 HSPs) |
| | |
|
| [»] scaffold0440 (1 HSPs) |
| | |
|
| [»] scaffold0012 (1 HSPs) |
| | |
|
| [»] scaffold0363 (1 HSPs) |
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| [»] scaffold0208 (2 HSPs) |
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|
| [»] scaffold0085 (1 HSPs) |
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|
| [»] scaffold1114 (1 HSPs) |
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| [»] scaffold0185 (1 HSPs) |
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| [»] scaffold1064 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 106; Significance: 4e-53; HSPs: 19)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 23 - 156
Target Start/End: Complemental strand, 39727404 - 39727271
Alignment:
| Q |
23 |
gatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttattattaacaactaaatttc |
122 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||| |
|
|
| T |
39727404 |
gatcataatcatgttcaatgttttgtttgcttccgttattgattcataattgttgaacatgttttatgaaatctatttttattattaagacctaaatttc |
39727305 |
T |
|
| Q |
123 |
caactatgtaacctcacacaaacacttttcatag |
156 |
Q |
| |
|
|||| || |||||||||||||||||||||||||| |
|
|
| T |
39727304 |
caacaatctaacctcacacaaacacttttcatag |
39727271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 9935348 - 9935437
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9935348 |
agatccgatcataatcatattcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttttatta |
9935437 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 17 - 124
Target Start/End: Complemental strand, 42993094 - 42992989
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttattattaacaacta |
116 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||| | ||| |
|
|
| T |
42993094 |
agatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatctgttttta--attaagaccta |
42992997 |
T |
|
| Q |
117 |
aatttcca |
124 |
Q |
| |
|
|||||||| |
|
|
| T |
42992996 |
aatttcca |
42992989 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 17 - 126
Target Start/End: Complemental strand, 39735642 - 39735532
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttattattaacaa-ct |
115 |
Q |
| |
|
|||||| |||||||||||||||||| |||| ||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| || || |
|
|
| T |
39735642 |
agatacaatcataatcatgttcaatattttatttacttccgctattgattcataattgttgaacatgttttatgaaatctatttttattattaaaaacct |
39735543 |
T |
|
| Q |
116 |
aaatttccaac |
126 |
Q |
| |
|
||||||||||| |
|
|
| T |
39735542 |
aaatttccaac |
39735532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 32890958 - 32891047
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
32890958 |
agatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatctgtttatatta |
32891047 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 32897082 - 32897171
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
32897082 |
agatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatctgtttatatta |
32897171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 7771301 - 7771390
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
7771301 |
agatccgatcataatcatgttcaatgttttgtttgcttccgctattgatttataattgttgaacatgtattatgaaatctgtttatatta |
7771390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 14799506 - 14799417
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||| ||||| |
|
|
| T |
14799506 |
agatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatttgtttatatta |
14799417 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 5542250 - 5542161
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||| ||| ||||| |
|
|
| T |
5542250 |
agatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgtattataaaatctatttatatta |
5542161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 36819040 - 36819129
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||| ||||| |
|
|
| T |
36819040 |
agatccgatcataatcatattcaatgttttgtttgcttccactattgattcataattgttgaacatgtattatgagatttgtttatatta |
36819129 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 1882847 - 1882735
Alignment:
| Q |
12 |
tcatcagatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttattattaac |
111 |
Q |
| |
|
|||| |||| || ||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||| |||||| |
|
|
| T |
1882847 |
tcattagatccgttcatattcatgttcaatgttttgtttgcttccgctattgattcttaattgttgaacatgttctatgaaatctgtttt--atattaag |
1882750 |
T |
|
| Q |
112 |
aactaaatttccaac |
126 |
Q |
| |
|
| ||||||||||||| |
|
|
| T |
1882749 |
acctaaatttccaac |
1882735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 14418010 - 14418096
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||| |
|
|
| T |
14418010 |
agatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcata---gttaaacatgttttatgaaatctgtttttatta |
14418096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 126
Target Start/End: Original strand, 10705919 - 10706019
Alignment:
| Q |
24 |
atcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttattattaacaactaaatttcc |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||| | ||||||||| | |||||| ||||||| |||||||||||||||||| ||||| | |||||||||| |
|
|
| T |
10705919 |
atcataatcatgttcaatgttttgtttgcttacgctattgatttacgattgttaaacatgtattatgaaatctgttttta--attaagacctaaatttcc |
10706016 |
T |
|
| Q |
124 |
aac |
126 |
Q |
| |
|
||| |
|
|
| T |
10706017 |
aac |
10706019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 24250172 - 24250257
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgttttt |
102 |
Q |
| |
|
|||| |||||||||| ||||||||| ||||||||| |||| ||||||||||||| ||||| ||||||||||||||||| ||||||| |
|
|
| T |
24250172 |
agatccgatcataataatgttcaatattttgtttgtttccgctattgattcatatttgttcaacatgttttatgaaatatgttttt |
24250257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 31399119 - 31399047
Alignment:
| Q |
25 |
tcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctg |
97 |
Q |
| |
|
||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||| | |||| ||||||| |
|
|
| T |
31399119 |
tcataatcatgttcaatgtattgtttgcctccactattgattcataattattgaacatatgttattaaatctg |
31399047 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 22219807 - 22219717
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttg-cttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| ||||||||||||||||||| ||||| ||| |||| |||||||||||||| | |||||||||||||||||||||| ||||||||| |
|
|
| T |
22219807 |
agatccgatcataatcatgttcaaagttttctttttcttctgctattgattcataactattgaacatgttttatgaaatctctttttatta |
22219717 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 101
Target Start/End: Original strand, 1171414 - 1171476
Alignment:
| Q |
39 |
aatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttt |
101 |
Q |
| |
|
|||||||||||||||||| | |||| |||||||||||||| |||||| |||||||||||||| |
|
|
| T |
1171414 |
aatgttttgtttgcttccgcggttgaatcataattgttgaatatgtttcatgaaatctgtttt |
1171476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 68 - 106
Target Start/End: Original strand, 39689782 - 39689820
Alignment:
| Q |
68 |
ataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39689782 |
ataattgttgaacatgttttatgaaatctgtttttatta |
39689820 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 31379502 - 31379430
Alignment:
| Q |
27 |
ataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtt |
99 |
Q |
| |
|
|||||||||||||||||||| ||||| ||| |||||||||||||| || ||||||| ||||||||| |||| |
|
|
| T |
31379502 |
ataatcatgttcaatgttttatttgcctccgtcattgattcataattattaaacatgtgttatgaaatttgtt |
31379430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 82; Significance: 8e-39; HSPs: 18)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 17 - 126
Target Start/End: Complemental strand, 30384468 - 30384360
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttattattaacaacta |
116 |
Q |
| |
|
|||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||| |
|
|
| T |
30384468 |
agatccgatcataatcgtgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgttttt-ttattaaaaccta |
30384370 |
T |
|
| Q |
117 |
aatttccaac |
126 |
Q |
| |
|
|||||||||| |
|
|
| T |
30384369 |
aatttccaac |
30384360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 24054404 - 24054493
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24054404 |
agatccgatcataatcatgttcaatgttttgtttgcttccgctatagatttataattgttgaacatgttttatgaaatctgtttttatta |
24054493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 28525476 - 28525387
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
28525476 |
agatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatctgtttatatta |
28525387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 28531572 - 28531483
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
28531572 |
agatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatctgtttatatta |
28531483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 12686269 - 12686186
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgttt |
100 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
12686269 |
agatccgatcataatcatgttcaatgttttgtttgcttccgctattgatttataattgttgaacatgttttatgaaatctgttt |
12686186 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 12692371 - 12692288
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgttt |
100 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
12692371 |
agatccgatcataatcatgttcaatgttttgtttgcttccgctattgatttataattgttgaacatgttttatgaaatctgttt |
12692288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 7389633 - 7389549
Alignment:
| Q |
22 |
cgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||| ||||| |
|
|
| T |
7389633 |
cgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatttgtttatatta |
7389549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 102
Target Start/End: Original strand, 14610223 - 14610303
Alignment:
| Q |
22 |
cgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgttttt |
102 |
Q |
| |
|
||||||||||||||||||||| ||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14610223 |
cgatcataatcatgttcaatggtttatttgcttccgctattaattcataattgttgaacatgttttatgaaatctgttttt |
14610303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 104
Target Start/End: Complemental strand, 16215257 - 16215177
Alignment:
| Q |
24 |
atcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttat |
104 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||| |
|
|
| T |
16215257 |
atcataatcatgttaaatgttttgtttgcttccgctattgattcataattgttgaatatgtgttatgaaatctgtttttat |
16215177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 24 - 126
Target Start/End: Complemental strand, 32097044 - 32096944
Alignment:
| Q |
24 |
atcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttattattaacaactaaatttcc |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||| |||||||||||||||||| ||||| | |||||||||| |
|
|
| T |
32097044 |
atcataatcatgttcaatgttttgtttgcttccgctattgatttacgattgttgaacatgtattatgaaatctgttttta--attaagacctaaatttcc |
32096947 |
T |
|
| Q |
124 |
aac |
126 |
Q |
| |
|
||| |
|
|
| T |
32096946 |
aac |
32096944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 41297346 - 41297435
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||| ||||| |
|
|
| T |
41297346 |
agatccgatcataattatgttcaatgttttgtttgcttctgctattgattcataattgttgaacatgtattatgaaatctctttatatta |
41297435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 126
Target Start/End: Complemental strand, 32094243 - 32094143
Alignment:
| Q |
24 |
atcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttattattaacaactaaatttcc |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||| |||| ||||||||||||| ||||| | |||||||||| |
|
|
| T |
32094243 |
atcataatcatgttcaatgttttgtttgcttccgctattgatttacgattgttgaacatgtattataaaatctgttttta--attaagacctaaatttcc |
32094146 |
T |
|
| Q |
124 |
aac |
126 |
Q |
| |
|
||| |
|
|
| T |
32094145 |
aac |
32094143 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 105
Target Start/End: Original strand, 26509926 - 26510004
Alignment:
| Q |
24 |
atcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatt |
105 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
26509926 |
atcataattatgttcaatgttttgtttgcttccactat---ttcataatgattgaacatgttttatgaaatctgtttttatt |
26510004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 30772357 - 30772459
Alignment:
| Q |
22 |
cgatcataatcatgttcaatgtttt-gtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttattattaacaactaaatt |
120 |
Q |
| |
|
|||||||||||||||||| |||||| ||||||||||||| || |||||||||| |||||||||||||||||||| || || ||||||| ||||||||| |
|
|
| T |
30772357 |
cgatcataatcatgttcattgtttttgtttgcttccactgtttattcataattattgaacatgttttatgaaat---ttatttttattaagaactaaatt |
30772453 |
T |
|
| Q |
121 |
tccaac |
126 |
Q |
| |
|
|||||| |
|
|
| T |
30772454 |
tccaac |
30772459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 104
Target Start/End: Complemental strand, 26316875 - 26316795
Alignment:
| Q |
24 |
atcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttat |
104 |
Q |
| |
|
|||||| | |||||||||||||| ||||||||||||||| ||| | |||| |||||||||||||||||||| ||||||||| |
|
|
| T |
26316875 |
atcatattaatgttcaatgttttttttgcttccactattaatttaaaattattgaacatgttttatgaaatatgtttttat |
26316795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 19066189 - 19066108
Alignment:
| Q |
25 |
tcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
||||| ||||| | |||||||||||||||||| ||| ||||| ||||| |||||||||| |||||||||| ||||||||||| |
|
|
| T |
19066189 |
tcatattcatgcttaatgttttgtttgcttccgctaatgatttataatcgttgaacatggtttatgaaatatgtttttatta |
19066108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 106
Target Start/End: Complemental strand, 19059840 - 19059765
Alignment:
| Q |
31 |
tcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
||||||| ||| |||||||||||||| ||| ||||| ||||| |||||| | |||||||||||| ||||||||||| |
|
|
| T |
19059840 |
tcatgtttaatattttgtttgcttcccctaatgatttataatcgttgaatacgttttatgaaatatgtttttatta |
19059765 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 64 - 106
Target Start/End: Complemental strand, 8706508 - 8706466
Alignment:
| Q |
64 |
attcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
||||||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
8706508 |
attcataattgttgaacatattttatgaaatctatttttatta |
8706466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 82; Significance: 8e-39; HSPs: 16)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 36750484 - 36750573
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36750484 |
agatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttttatta |
36750573 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 28683035 - 28682946
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
28683035 |
agatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttatatta |
28682946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 35090739 - 35090650
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
35090739 |
agatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttatatta |
35090650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 35084766 - 35084677
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
35084766 |
agatccgatcataatcattttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttatatta |
35084677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 35438799 - 35438715
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttt |
101 |
Q |
| |
|
|||| ||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||| |||||| |
|
|
| T |
35438799 |
agatccgatcataatcatgttcaatgttttatttgcttccgctattgattcataactgttgaacatgttttatgaaatttgtttt |
35438715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 30965397 - 30965483
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgttttta |
103 |
Q |
| |
|
|||| |||||||||||||||||||| |||||||||||||| ||||||||| || |||||||||||||| |||||||||||||||||| |
|
|
| T |
30965397 |
agatccgatcataatcatgttcaatattttgtttgcttccgctattgatttatgattgttgaacatgtattatgaaatctgttttta |
30965483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 126
Target Start/End: Original strand, 31002446 - 31002553
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttattattaacaacta |
116 |
Q |
| |
|
|||| |||||||||||||||||||| |||||||||||||| ||||||||| | |||||||||||||| |||||||||||||||||| ||||| | ||| |
|
|
| T |
31002446 |
agatccgatcataatcatgttcaatattttgtttgcttccgctattgatttacgattgttgaacatgtattatgaaatctgttttta--attaagaccta |
31002543 |
T |
|
| Q |
117 |
aatttccaac |
126 |
Q |
| |
|
|||||||||| |
|
|
| T |
31002544 |
aatttccaac |
31002553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 126
Target Start/End: Original strand, 31008424 - 31008531
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttattattaacaacta |
116 |
Q |
| |
|
|||| |||||||||||||||||||| |||||||||||||| ||||||||| | |||||||||||||| |||||||||||||||||| ||||| | ||| |
|
|
| T |
31008424 |
agatccgatcataatcatgttcaatattttgtttgcttccgctattgatttacgattgttgaacatgtattatgaaatctgttttta--attaagaccta |
31008521 |
T |
|
| Q |
117 |
aatttccaac |
126 |
Q |
| |
|
|||||||||| |
|
|
| T |
31008522 |
aatttccaac |
31008531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 13149776 - 13149687
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
13149776 |
agatccgatcataatcatgttcaatgttttgtttgcttccgctattgatttacgattgttgaacatgtattatgaaatctgtttatatta |
13149687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 13456169 - 13456258
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| |||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||| ||| ||||| |
|
|
| T |
13456169 |
agatccgatcataatcaggttcaatgttttgtttgcttccgctattgattcacaattgttgaacatgtattatgaaatctatttatatta |
13456258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 13462110 - 13462199
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| |||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||| ||| ||||| |
|
|
| T |
13462110 |
agatccgatcataatcaggttcaatgttttgtttgcttccgctattgattcacaattgttgaacatgtattatgaaatctatttatatta |
13462199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 103
Target Start/End: Complemental strand, 11048636 - 11048557
Alignment:
| Q |
24 |
atcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgttttta |
103 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| | |||||| |
|
|
| T |
11048636 |
atcataatcatgttcaatgttttgtttgcttcagctattgattcataattgttggacatgttttatgaaatttattttta |
11048557 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 44716895 - 44716805
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgttt-gcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| ||||||||||||||||||||||||| ||| |||||| ||||||||| |||| |||||||||||||||||| |||||||||||||| |
|
|
| T |
44716895 |
agatccgatcataatcatgttcaatgttttcttttgcttccgctattgattgataaccgttgaacatgttttatgatatctgtttttatta |
44716805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 23343638 - 23343709
Alignment:
| Q |
25 |
tcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatct |
96 |
Q |
| |
|
||||| |||||||||||||||||||||||||| || ||||||| |||| ||||||||||||||||||||||| |
|
|
| T |
23343638 |
tcatattcatgttcaatgttttgtttgcttccgctgttgattcgtaatcgttgaacatgttttatgaaatct |
23343709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 105
Target Start/End: Original strand, 29833282 - 29833365
Alignment:
| Q |
22 |
cgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatt |
105 |
Q |
| |
|
|||||||||| ||||||||| |||| |||| |||| |||||||||| |||| || ||||||| ||||||||||| ||| |||| |
|
|
| T |
29833282 |
cgatcataattatgttcaatattttatttgtttccgttattgattcacaattattaaacatgtattatgaaatctctttatatt |
29833365 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 105
Target Start/End: Complemental strand, 1388090 - 1388022
Alignment:
| Q |
36 |
ttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatt |
105 |
Q |
| |
|
|||||||||||||||| |||| ||||||||||||||| ||||| |||||||||||| | | |||||||| |
|
|
| T |
1388090 |
ttcaatgttttgtttgtttccgttattgattcataattattgaa-atgttttatgaagtatatttttatt |
1388022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 78; Significance: 2e-36; HSPs: 19)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 8650893 - 8650804
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
8650893 |
agatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttatatta |
8650804 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 8662871 - 8662782
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
8662871 |
agatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttatatta |
8662782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 32035376 - 32035287
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
32035376 |
agatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttatatta |
32035287 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 21190956 - 21190873
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgttt |
100 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
21190956 |
agatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatattttatgaaatctgttt |
21190873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 4580411 - 4580322
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
4580411 |
agatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcatagttgttgaacatgtattatgaaatctgtttatatta |
4580322 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 21782843 - 21782754
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
21782843 |
agatccgatcataatcatgttcaatgttttgtttgcttccgctattgatttataattgttgaacatgtattatgaaatctgtttatatta |
21782754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 126
Target Start/End: Complemental strand, 31756305 - 31756197
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttattattaacaacta |
116 |
Q |
| |
|
|||| |||| |||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||| | ||| |
|
|
| T |
31756305 |
agatccgattataatcatgttcaatgttttatttgcttccgttgttgattcataattgttgaacatgttttatgaaatctgttttt-ttattaagaccta |
31756207 |
T |
|
| Q |
117 |
aatttccaac |
126 |
Q |
| |
|
|||||||||| |
|
|
| T |
31756206 |
aatttccaac |
31756197 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 33 - 103
Target Start/End: Complemental strand, 21197095 - 21197025
Alignment:
| Q |
33 |
atgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgttttta |
103 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
21197095 |
atgttcaatgttttgtttgcttccgctattgattcataatcgttgaacatgttttatgaaatctgttttta |
21197025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 126
Target Start/End: Original strand, 25354280 - 25354387
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttattattaacaacta |
116 |
Q |
| |
|
|||| ||||||||||||||||||||| ||||||||||||| ||||||||| | |||||||||||||| |||||||||||||||||| ||||| | ||| |
|
|
| T |
25354280 |
agatccgatcataatcatgttcaatgctttgtttgcttccgctattgatttacgattgttgaacatgtattatgaaatctgttttta--attaagatcta |
25354377 |
T |
|
| Q |
117 |
aatttccaac |
126 |
Q |
| |
|
|||||||||| |
|
|
| T |
25354378 |
aatttccaac |
25354387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 17581705 - 17581783
Alignment:
| Q |
27 |
ataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatt |
105 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||| | |||||||||| |
|
|
| T |
17581705 |
ataatcatgttcaatgttttgtttgcttccgctatcgattcataatagttgaacatgttttatgaattatgtttttatt |
17581783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 18778652 - 18778742
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatg-ttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| |||||||||| |||||||| ||||||||||||||| |||||||||||||||| ||||||||| ||||||||||| |||||| |||| |
|
|
| T |
18778652 |
agatccgatcataattatgttcaacgttttgtttgcttccgctattgattcataattattgaacatgtttttatgaaatttgttttaatta |
18778742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 25343693 - 25343759
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatg |
83 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||| |
|
|
| T |
25343693 |
agatccgatcataatcatgttcaatgttttgtttgcttctgctattgatttacgattgttgaacatg |
25343759 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 34603420 - 34603337
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttt |
101 |
Q |
| |
|
|||| |||||||||| |||||||||| ||||||||||| | ||||| ||||||||||||| ||||||||||| |||| |||||| |
|
|
| T |
34603420 |
agatccgatcataattatgttcaatgctttgtttgctt-cgctatttattcataattgttacacatgttttattaaatatgtttt |
34603337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 34724697 - 34724614
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttt |
101 |
Q |
| |
|
|||| |||||||||| |||||||||| ||||||||||| | ||||| ||||||||||||| ||||||||||| |||| |||||| |
|
|
| T |
34724697 |
agatccgatcataattatgttcaatgctttgtttgctt-cgctatttattcataattgttacacatgttttattaaatatgtttt |
34724614 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 103
Target Start/End: Complemental strand, 21770632 - 21770562
Alignment:
| Q |
33 |
atgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgttttta |
103 |
Q |
| |
|
|||||||||||||||||| ||||| ||||| ||| | |||||||| ||||| |||||||||||||||||| |
|
|
| T |
21770632 |
atgttcaatgttttgtttacttcctctattaatttacgattgttgatcatgtattatgaaatctgttttta |
21770562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 102
Target Start/End: Original strand, 6098060 - 6098135
Alignment:
| Q |
31 |
tcatgttcaatgttttgtttgcttccactatt-gattcataattgt---tgaacatgttttatgaaatctgttttt |
102 |
Q |
| |
|
|||||||||||||||||| | ||||| ||||| ||||||||||||| ||||||||||||||||||| ||||||| |
|
|
| T |
6098060 |
tcatgttcaatgttttgtctacttccgctatttgattcataattgttgttgaacatgttttatgaaatttgttttt |
6098135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 126
Target Start/End: Original strand, 6102708 - 6102803
Alignment:
| Q |
33 |
atgttcaatgttttgtttgcttccactatt-gattcataattgt---tgaacatgttttatgaaatctgtttttattattaacaactaaatttccaac |
126 |
Q |
| |
|
|||||||||||||||| ||||||| ||||| ||||||| ||||| ||||||| ||||||||||| |||||| |||| || | ||||||||||||| |
|
|
| T |
6102708 |
atgttcaatgttttgtctgcttccgctatttgattcatgattgttgttgaacatattttatgaaatatgtttt--ttatgaagacctaaatttccaac |
6102803 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 21783383 - 21783337
Alignment:
| Q |
33 |
atgttcaatgttttgtttgcttccactattgattcataattgttgaa |
79 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| | ||||||||| |
|
|
| T |
21783383 |
atgttcaatgttttgtttgcttccgctattgatttactattgttgaa |
21783337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 21789606 - 21789560
Alignment:
| Q |
33 |
atgttcaatgttttgtttgcttccactattgattcataattgttgaa |
79 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| | ||||||||| |
|
|
| T |
21789606 |
atgttcaatgttttgtttgcttccgctattgatttactattgttgaa |
21789560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 78; Significance: 2e-36; HSPs: 24)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 10244424 - 10244335
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
10244424 |
agatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttatatta |
10244335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 23 - 106
Target Start/End: Complemental strand, 10238296 - 10238213
Alignment:
| Q |
23 |
gatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
10238296 |
gatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttatatta |
10238213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 49151681 - 49151770
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
49151681 |
agatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatctgtttatatta |
49151770 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 49157748 - 49157837
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
49157748 |
agatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatctgtttatatta |
49157837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 55003502 - 55003413
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
55003502 |
agatccgatcataatcatgttcaatgttttatttgcttctgctattgattcataattgttgaacatgttttatgaaatctgtttttatta |
55003413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 27 - 106
Target Start/End: Complemental strand, 30051182 - 30051103
Alignment:
| Q |
27 |
ataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30051182 |
ataatcatgttcaatattttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttttatta |
30051103 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 22 - 105
Target Start/End: Complemental strand, 48128132 - 48128049
Alignment:
| Q |
22 |
cgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatt |
105 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
48128132 |
cgatcataatcatgttcaatgttttgtttgtttccgctattgattcataattgttgaacatgtttcatgaaatctgtttttatt |
48128049 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 122
Target Start/End: Complemental strand, 17055883 - 17055780
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttattattaacaacta |
116 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||| ||||||| | ||| |
|
|
| T |
17055883 |
agatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatattttatgaaaactgtttt--ttattaagaccta |
17055786 |
T |
|
| Q |
117 |
aatttc |
122 |
Q |
| |
|
|||||| |
|
|
| T |
17055785 |
aatttc |
17055780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 11839815 - 11839726
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||| ||||| |
|
|
| T |
11839815 |
agatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgtatcatgaaatctgtttatatta |
11839726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 53069144 - 53069055
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
53069144 |
agatccgatcataatcatgttcaatgttttgtttgcttccgctatcgatttataattgttgaacatgttttataaaatctgtttttatta |
53069055 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 17 - 126
Target Start/End: Original strand, 28964937 - 28965041
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttattattaacaacta |
116 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||| | ||| |
|
|
| T |
28964937 |
agatccgatcataatcatgttcaatgttttgtttgcttccgctattgattc---attgttgaacatgttttatgaaatctgttttta--attaagaccta |
28965031 |
T |
|
| Q |
117 |
aatttccaac |
126 |
Q |
| |
|
|||||||||| |
|
|
| T |
28965032 |
aatttccaac |
28965041 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 10760740 - 10760654
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgttttta |
103 |
Q |
| |
|
|||| ||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||| |
|
|
| T |
10760740 |
agatccgatcataatcatgttcaatgttttatttgcttccgctattgatttataattgttgaacatgtattatgaaatctgttttta |
10760654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 8331856 - 8331945
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||| ||| ||||| |
|
|
| T |
8331856 |
agatccgatcataatcatgttcaatgttttgtttgcttccgctattgatttataattgttgaacatgttttataaaatctatttatatta |
8331945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 11846153 - 11846064
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||| ||||||||||| |||| |
|
|
| T |
11846153 |
agatccgatcataatcatgttcaatgttttgtttgcttccgctattgatttataattgttgaacatgtattataaaatctgttttaatta |
11846064 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 38449153 - 38449074
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatct |
96 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
38449153 |
agatccgatcataatcatgttcaatgttttgtttgcttccgctattgatttataattgttgaacatgtattatgaaatct |
38449074 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 38455640 - 38455561
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatct |
96 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
38455640 |
agatccgatcataatcatgttcaatgttttgtttgcttccgctattgatttataattgttgaacatgtattatgaaatct |
38455561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 42191310 - 42191221
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| |||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||| ||| ||||| |
|
|
| T |
42191310 |
agatccgatcataatcaggttcaatgttttgtttgcttccgctattgattcacaattgttgaacatgtattatgaaatctatttatatta |
42191221 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 42197252 - 42197163
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| |||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||| ||| ||||| |
|
|
| T |
42197252 |
agatccgatcataatcaggttcaatgttttgtttgcttccgctattgattcacaattgttgaacatgtattatgaaatctatttatatta |
42197163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 25 - 103
Target Start/End: Complemental strand, 10766953 - 10766875
Alignment:
| Q |
25 |
tcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgttttta |
103 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||| ||||||||| |||||||| |
|
|
| T |
10766953 |
tcataatcatgttcaatgttttgtttgcttccgctgttgatttataattgttgaacatgtattatgaaatttgttttta |
10766875 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 24643635 - 24643570
Alignment:
| Q |
24 |
atcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttat |
89 |
Q |
| |
|
||||||||||||||||||||||| ||| ||||| |||||||||||||| ||||||||||||||||| |
|
|
| T |
24643635 |
atcataatcatgttcaatgttttatttacttccgctattgattcataaatgttgaacatgttttat |
24643570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 17593372 - 17593268
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttattattaacaacta |
116 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| | ||||||| | |||||||||||| | ||||||||| | |||||| ||||| | ||| |
|
|
| T |
17593372 |
agatccgatcataatcatgttcaatgttttgtttgcttccgcgattgatttacgattgttgaacatctattatgaaatatattttta--attaagaccta |
17593275 |
T |
|
| Q |
117 |
aatttcc |
123 |
Q |
| |
|
||||||| |
|
|
| T |
17593274 |
aatttcc |
17593268 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 105
Target Start/End: Original strand, 13445142 - 13445208
Alignment:
| Q |
39 |
aatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatt |
105 |
Q |
| |
|
|||||||| ||||||||| ||||||||| |||||||||||||||||| ||| |||||| |||||||| |
|
|
| T |
13445142 |
aatgttttatttgcttccgctattgatttataattgttgaacatgttctatcaaatctatttttatt |
13445208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 105
Target Start/End: Original strand, 46656753 - 46656841
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatt |
105 |
Q |
| |
|
|||| |||||||||| || || |||||||| ||| |||| ||||| ||||||| || |||||||||||||||||||| |||||||||| |
|
|
| T |
46656753 |
agatccgatcataattatattgaatgttttatttacttcagctattaattcatatttattgaacatgttttatgaaatatgtttttatt |
46656841 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 56
Target Start/End: Original strand, 34300566 - 34300605
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttcc |
56 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
34300566 |
agatccgatcataatcatgttcaatgttttgtttgcttcc |
34300605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0236 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0236
Description:
Target: scaffold0236; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 5604 - 5687
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgttt |
100 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5604 |
agatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgttt |
5687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 76; Significance: 3e-35; HSPs: 22)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 24288056 - 24288135
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatct |
96 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24288056 |
agatacgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatct |
24288135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 10733336 - 10733253
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgttt |
100 |
Q |
| |
|
|||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10733336 |
agatccgatcataatcatgttcaatgttttatttgcttccgctattgattcataattgttgaacatgttttatgaaatctgttt |
10733253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 10739429 - 10739346
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgttt |
100 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10739429 |
agatccgatcataatcatgttcaatgttttgtttgcttctgctattgattcataattgttgaacatgttttatgaaatctgttt |
10739346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 10947105 - 10947022
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgttt |
100 |
Q |
| |
|
|||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10947105 |
agatccgatcataatcatgttcaatgttttatttgcttccgctattgattcataattgttgaacatgttttatgaaatctgttt |
10947022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 10953198 - 10953115
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgttt |
100 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10953198 |
agatccgatcataatcatgttcaatgttttgtttgcttctgctattgattcataattgttgaacatgttttatgaaatctgttt |
10953115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 22 - 106
Target Start/End: Original strand, 50168667 - 50168751
Alignment:
| Q |
22 |
cgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||| |||||||| |
|
|
| T |
50168667 |
cgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacgtgttttatgtaatctggttttatta |
50168751 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 30 - 106
Target Start/End: Original strand, 4632869 - 4632945
Alignment:
| Q |
30 |
atcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4632869 |
atcatgttcaatgttttgtttgcttccgctgttgattaataattgttgaacatgttttatgaaatctgtttttatta |
4632945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 33 - 106
Target Start/End: Complemental strand, 26956903 - 26956830
Alignment:
| Q |
33 |
atgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
26956903 |
atgttcaatgttttatttgcttccgctattgattcataatcgttgaacatgttttatgaaatctgtttttatta |
26956830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 33 - 106
Target Start/End: Complemental strand, 26963415 - 26963342
Alignment:
| Q |
33 |
atgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||| |
|
|
| T |
26963415 |
atgttcaatgttttgtttgcttccgctattgattcataatcgttgaacatgttttatgaaatttgtttttatta |
26963342 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 49976656 - 49976745
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||| | |||| ||||||||||||||||| |||||||||||||| ||||||||||| |
|
|
| T |
49976656 |
agatccgatcataatcatattcaatgttttgtttgctttcgctatcgattcataattgttgaatatgttttatgaaatttgtttttatta |
49976745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 17 - 126
Target Start/End: Complemental strand, 33458357 - 33458250
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttattattaacaacta |
116 |
Q |
| |
|
|||| |||||||||||||||||||| |||||||||||||| ||||||||| | |||||||||||| | |||||||||||||||||| ||||| | ||| |
|
|
| T |
33458357 |
agatccgatcataatcatgttcaatattttgtttgcttccgctattgatttacgattgttgaacatatattatgaaatctgttttta--attaagaccta |
33458260 |
T |
|
| Q |
117 |
aatttccaac |
126 |
Q |
| |
|
|||||||||| |
|
|
| T |
33458259 |
aatttccaac |
33458250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 6257295 - 6257206
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| || |||||| || |||||||||||||| ||||||||||| ||| ||||| |
|
|
| T |
6257295 |
agatccgatcataatcatgttcaatgttttgtttgcttccgctgttgatttatgattgttgaacatgtattatgaaatctatttatatta |
6257206 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 48161028 - 48161114
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| |||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||| ||||||||| |
|
|
| T |
48161028 |
agatccgatcataattatgttcaatgttttgtttgcttccgctattgattcata---gttgaacatattttatgaaatctatttttatta |
48161114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 48167247 - 48167333
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| |||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||| ||||||||| |
|
|
| T |
48167247 |
agatccgatcataattatgttcaatgttttgtttgcttccgctattgattcata---gttgaacatattttatgaaatctatttttatta |
48167333 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 91
Target Start/End: Original strand, 3769636 - 3769710
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatga |
91 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||| |||||||| |
|
|
| T |
3769636 |
agatccgatcataatcatgttcaatgttttgtttgcttaaattattgattcataattattgaacatattttatga |
3769710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 34308144 - 34308077
Alignment:
| Q |
34 |
tgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttt |
101 |
Q |
| |
|
|||||||| |||||| ||||||| |||||||||||||||| ||||||||||||||| ||||||||||| |
|
|
| T |
34308144 |
tgttcaatattttgtatgcttccgctattgattcataattattgaacatgttttataaaatctgtttt |
34308077 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 33461474 - 33461418
Alignment:
| Q |
26 |
cataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacat |
82 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |
|
|
| T |
33461474 |
cataatcatgttcaatgttttgtttgcttccactattgatttacgattgttgaacat |
33461418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 106
Target Start/End: Original strand, 50156043 - 50156103
Alignment:
| Q |
46 |
tgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
||||| ||||| |||||||||||||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
50156043 |
tgtttacttccgctattgattcataattgttgaacatgttttatataatctggttttatta |
50156103 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 9237441 - 9237502
Alignment:
| Q |
26 |
cataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgtttt |
87 |
Q |
| |
|
||||||||| ||||||||| |||||||||| |||||| ||||||||| ||||||||||||| |
|
|
| T |
9237441 |
cataatcatattcaatgttctgtttgcttcgactattcattcataatcattgaacatgtttt |
9237502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 19686418 - 19686341
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaat |
94 |
Q |
| |
|
|||| |||| ||||| | ||||||| |||||||||||||| |||||||| ||| || |||||||||||||||||||| |
|
|
| T |
19686418 |
agatccgatgataattacgttcaatattttgtttgcttccgttattgatttatagttattgaacatgttttatgaaat |
19686341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 50427450 - 50427497
Alignment:
| Q |
22 |
cgatcataatcatgttcaatgttttgtttgcttccactattgattcata |
70 |
Q |
| |
|
||||||||||||| |||||||||||| |||||||||||||| ||||||| |
|
|
| T |
50427450 |
cgatcataatcat-ttcaatgttttgattgcttccactattaattcata |
50427497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 106
Target Start/End: Complemental strand, 55473225 - 55473146
Alignment:
| Q |
24 |
atcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
||||||||||| |||||| |||| ||||||||| |||||||| | ||| |||||||| ||||||||||| ||||| ||||| |
|
|
| T |
55473225 |
atcataatcatattcaatattttatttgcttccgctattgat---ttattattgaacatattttatgaaatttgtttctatta |
55473146 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0440 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0440
Description:
Target: scaffold0440; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 17 - 126
Target Start/End: Complemental strand, 1284 - 1177
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttattattaacaacta |
116 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||| | ||| |
|
|
| T |
1284 |
agatccgatcataatcatgttcaatgttttgtttgcttccgcctttgattcataattgttgaacatgttttatgaaatctgttttta--attaagaccta |
1187 |
T |
|
| Q |
117 |
aatttccaac |
126 |
Q |
| |
|
|||||||||| |
|
|
| T |
1186 |
aatttccaac |
1177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 75; Significance: 1e-34; HSPs: 17)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 17 - 126
Target Start/End: Complemental strand, 42767385 - 42767278
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttattattaacaacta |
116 |
Q |
| |
|
|||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||| | ||| |
|
|
| T |
42767385 |
agatccgatcataatcatgttcaatattttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatctgttttta--attaagaccta |
42767288 |
T |
|
| Q |
117 |
aatttccaac |
126 |
Q |
| |
|
|||||||||| |
|
|
| T |
42767287 |
aatttccaac |
42767278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 339440 - 339529
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||| |
|
|
| T |
339440 |
agatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctctttatatta |
339529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 351855 - 351944
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
351855 |
agatccgatcataatcatgttcaatgttttgtttgcttccgctgttgattcataattgttgaacatgttttatgaaatctgtttatatta |
351944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 3811259 - 3811170
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
3811259 |
agatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatctgtttatatta |
3811170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 3817401 - 3817312
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
3817401 |
agatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatctgtttatatta |
3817312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 35148094 - 35148005
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35148094 |
agatccgatcataatcatgttcaatgttttgtttgcttccgctatcgatttataattgttgaacatgttttatgaaatctgtttttatta |
35148005 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 28421049 - 28420966
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgttt |
100 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
28421049 |
agatccgatcataatcatgttcaatgttttgtttgcttccgctattgatttataattgttgaacatgttttatgaaatctgttt |
28420966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 31 - 106
Target Start/End: Original strand, 12804083 - 12804158
Alignment:
| Q |
31 |
tcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
12804083 |
tcatgttcaatgttttgcttgcttccgctattgattcataatcgttgaacatgttttatgaaatctgtttttatta |
12804158 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 20239020 - 20239109
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
20239020 |
agatccgatcataatcatgttcaatgttttgtttgcttccgctattgatgtatgattgttgaacatgttttatgaaatttgtttatatta |
20239109 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 43540054 - 43540143
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| |||||||||||||||||||| |||| ||| |||| |||||||||||||||| ||||||||||| |||||||||||||||||||| |
|
|
| T |
43540054 |
agatccgatcataatcatgttcaatattttatttaattccgctattgattcataattattgaacatgttctatgaaatctgtttttatta |
43540143 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 105
Target Start/End: Complemental strand, 22742015 - 22741920
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattg-------attcataattgttgaacatgttttatgaaatctgtttttatt |
105 |
Q |
| |
|
|||| ||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
22742015 |
agatccgatcataatcatgttcaatgttcagtttgcttccgctattgttgattcattcataattgttgaacatgttttatgaaacctgttcttatt |
22741920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 103
Target Start/End: Complemental strand, 5979257 - 5979178
Alignment:
| Q |
24 |
atcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgttttta |
103 |
Q |
| |
|
|||||||||||||||||| ||||||||||| | ||||||||| | |||||| ||||||| |||||||||||||||||| |
|
|
| T |
5979257 |
atcataatcatgttcaatagtttgtttgctttcgctattgatttacgattgttcaacatgtattatgaaatctgttttta |
5979178 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 26383695 - 26383774
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatct |
96 |
Q |
| |
|
|||| ||||||| |||||||||||| ||||||||| ||| | |||||||||||||||||||||||| ||||||||||| |
|
|
| T |
26383695 |
agatccgatcatgatcatgttcaatattttgtttgtttctgttgttgattcataattgttgaacatgtcttatgaaatct |
26383774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 5849610 - 5849684
Alignment:
| Q |
33 |
atgttcaatgttttgtttgcttccactattgattcataattgttgaacat-gttttatgaaatctgtttttatta |
106 |
Q |
| |
|
||||||||||||||| |||||||| ||||||||||||||| |||||||| |||||| |||| ||||||||||| |
|
|
| T |
5849610 |
atgttcaatgttttggttgcttccgctattgattcataatcattgaacataattttataaaatttgtttttatta |
5849684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 101
Target Start/End: Original strand, 26381144 - 26381222
Alignment:
| Q |
23 |
gatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttt |
101 |
Q |
| |
|
|||||| |||||||||||| || |||||| || | | |||||||||||||||||||||||| ||||||||||| |||| |
|
|
| T |
26381144 |
gatcatgatcatgttcaatattgtgtttgttttcccccttgattcataattgttgaacatgtcttatgaaatctatttt |
26381222 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 30219328 - 30219269
Alignment:
| Q |
25 |
tcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgt |
84 |
Q |
| |
|
||||| |||||||||| |||||||||| |||| ||| |||||||||||| |||||||||| |
|
|
| T |
30219328 |
tcatattcatgttcaacgttttgtttgattccgctaatgattcataattattgaacatgt |
30219269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 58
Target Start/End: Complemental strand, 18666580 - 18666545
Alignment:
| Q |
23 |
gatcataatcatgttcaatgttttgtttgcttccac |
58 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||| |
|
|
| T |
18666580 |
gatcataatcaagttcaatgttttgtttgcttccac |
18666545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 74; Significance: 5e-34; HSPs: 14)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 25387594 - 25387505
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| |
|
|
| T |
25387594 |
agatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcatatttgttgaacatgttttatgaaatctgtttatatta |
25387505 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 34740055 - 34740144
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||| |
|
|
| T |
34740055 |
agatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgatgaacatgttttatgaaatctgtttatatta |
34740144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 50306258 - 50306347
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
50306258 |
agatccgattataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttatatta |
50306347 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 1078293 - 1078382
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
1078293 |
agatccgatcataatcatgttcaatgttttgtttgcttccgctattgattaataattgttgaacatgtattatgaaatctgtttatatta |
1078382 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 25381625 - 25381536
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
25381625 |
agatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcatagttgttgaacatgtattatgaaatctgtttatatta |
25381536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 24963784 - 24963703
Alignment:
| Q |
25 |
tcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
||||| |||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||| |
|
|
| T |
24963784 |
tcatattcatgttcaatgttttgtttgcttccgctattgattcatattcgttgaacatgttttatgaaatctgtttttatta |
24963703 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 33 - 103
Target Start/End: Original strand, 44410095 - 44410165
Alignment:
| Q |
33 |
atgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgttttta |
103 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
44410095 |
atgttcaatgttttgtttgcttccgctattgattcataatcgttgaacatgttttatgaaatctgttttta |
44410165 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 27955230 - 27955318
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||||||||| || ||| || ||||||||||||||||||||||||||||| |
|
|
| T |
27955230 |
agatccgatcataatcatgttcaatgttttgtttgcttccgctattgatt-atgattattaaacatgttttatgaaatctgtttttatta |
27955318 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 31058113 - 31058202
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
31058113 |
agatccgatcataatcatgttcaatgttttgtttgcttccgctattgatttacgattgttgaacatgtattatgaaatctgtttatatta |
31058202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 126
Target Start/End: Complemental strand, 12183667 - 12183563
Alignment:
| Q |
24 |
atcataatcatgttcaatgttttgtttgcttccactattgattcata-----attgttgaacatgttttatgaaatctgtttttattattaacaactaaa |
118 |
Q |
| |
|
|||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||| ||||||| ||||||| |
|
|
| T |
12183667 |
atcataattatgttcaatattttgtttgcttccactattgattcataattatattgttgaacatattttatgaaatctattt---ttattaagaactaaa |
12183571 |
T |
|
| Q |
119 |
tttccaac |
126 |
Q |
| |
|
|||||||| |
|
|
| T |
12183570 |
tttccaac |
12183563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 33 - 106
Target Start/End: Complemental strand, 24926828 - 24926756
Alignment:
| Q |
33 |
atgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
24926828 |
atgttcaatgttttggttgcttccgctattgattcataatcgttgaacatgttttatg-aatctgtttttatta |
24926756 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 38152052 - 38151981
Alignment:
| Q |
30 |
atcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttt |
101 |
Q |
| |
|
|||||||||||| |||||||||||||| || |||||| ||||||||||||||||||||||||||||| |||| |
|
|
| T |
38152052 |
atcatgttcaatattttgtttgcttccgctgttgattaataattgttgaacatgttttatgaaatctatttt |
38151981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 91
Target Start/End: Original strand, 31051620 - 31051687
Alignment:
| Q |
24 |
atcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatga |
91 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||| |||||| |
|
|
| T |
31051620 |
atcataatcatgttcaatgttttgtttgcttccgctattgatttacgattgttgaacatgtattatga |
31051687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 91
Target Start/End: Complemental strand, 8092936 - 8092862
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatga |
91 |
Q |
| |
|
|||| ||||||||||||||||||||||||| |||||||| ||||||||| | ||||||||| |||| |||||| |
|
|
| T |
8092936 |
agatccgatcataatcatgttcaatgttttatttgcttctgctattgatttacgattgttgaatatgtattatga |
8092862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0012 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0012
Description:
Target: scaffold0012; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 172980 - 172891
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||| ||||| |
|
|
| T |
172980 |
agatccgatcataatcattttcaatgttttgtttgcttccgctattgattcataattgtagaacatgttttatgaaacctgtttatatta |
172891 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0363 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0363
Description:
Target: scaffold0363; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 709 - 623
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||| |
|
|
| T |
709 |
agatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcata---gttaaacatgttttatgaaatctgtttttatta |
623 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0208 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0208
Description:
Target: scaffold0208; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 6600 - 6670
Alignment:
| Q |
25 |
tcataatcatgttcaatgttttgtttgcttccactattgattcat-aattgttgaacatgttttatgaaat |
94 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||| |
|
|
| T |
6600 |
tcataatcatgttcaatgttttgtttgcttccgctattgattcataaattgttgaacatggtttatgaaat |
6670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0208; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 94
Target Start/End: Original strand, 12465 - 12543
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcat-aattgttgaacatgttttatgaaat |
94 |
Q |
| |
|
|||| |||||||||| |||||||||||||| ||||||||| |||||||||||| |||||||||| ||| |||||||||| |
|
|
| T |
12465 |
agattcgatcataattatgttcaatgttttatttgcttccgctattgattcataaattgttgaatatggtttatgaaat |
12543 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0085 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0085
Description:
Target: scaffold0085; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 105
Target Start/End: Original strand, 38497 - 38585
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatt |
105 |
Q |
| |
|
|||| ||||||||| ||||||||||||||||||||||||||| |||||| |||| |||||||||| |||||||||||| ||||||| |
|
|
| T |
38497 |
agatccgatcataactatgttcaatgttttgtttgcttccactgttgatttctaatgattgaacatgtcttatgaaatctggttttatt |
38585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1114 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold1114
Description:
Target: scaffold1114; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 45 - 106
Target Start/End: Original strand, 1182 - 1243
Alignment:
| Q |
45 |
ttgtttgcttccactattgattcataattgttgaacatgttttatgaaatctgtttttatta |
106 |
Q |
| |
|
|||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
1182 |
ttgtttgctttcgatattgattcataatggttgaacatgttttatgaaatctgtttttatta |
1243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0185 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0185
Description:
Target: scaffold0185; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 5992 - 6061
Alignment:
| Q |
17 |
agatacgatcataatcatgttcaatgttttgtttgcttccactattgattcataattgttgaacatgttt |
86 |
Q |
| |
|
|||| |||||||| |||||||||||||||||||| | || ||||||||| |||||| |||||||||||| |
|
|
| T |
5992 |
agatccgatcatattcatgttcaatgttttgtttaatgccgctattgattaataattattgaacatgttt |
6061 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1064 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold1064
Description:
Target: scaffold1064; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 1454 - 1505
Alignment:
| Q |
36 |
ttcaatgttttgtttgcttccactattgattcataattgttgaacatgtttt |
87 |
Q |
| |
|
||||||||| ||||||||| |||||||||||||||| ||||||||||||| |
|
|
| T |
1454 |
ttcaatgttctgtttgcttagactattgattcataataattgaacatgtttt |
1505 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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