View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8207_high_9 (Length: 221)

Name: NF8207_high_9
Description: NF8207
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8207_high_9
NF8207_high_9
[»] chr1 (1 HSPs)
chr1 (1-202)||(36314614-36314815)
[»] chr8 (19 HSPs)
chr8 (26-202)||(19390536-19390712)
chr8 (12-202)||(19345122-19345312)
chr8 (9-202)||(19504028-19504221)
chr8 (26-202)||(19337406-19337582)
chr8 (2-202)||(19410733-19410933)
chr8 (2-202)||(19457752-19457952)
chr8 (2-202)||(19523126-19523326)
chr8 (35-203)||(19469524-19469692)
chr8 (35-203)||(19540448-19540616)
chr8 (35-203)||(19592082-19592250)
chr8 (57-202)||(19468610-19468755)
chr8 (57-202)||(19555531-19555676)
chr8 (26-202)||(19355426-19355602)
chr8 (44-202)||(19172821-19172979)
chr8 (39-198)||(19376574-19376733)
chr8 (44-202)||(19287667-19287825)
chr8 (57-198)||(19404705-19404846)
chr8 (69-203)||(19370912-19371046)
chr8 (69-203)||(19341132-19341266)
[»] chr6 (1 HSPs)
chr6 (44-202)||(19543019-19543177)


Alignment Details
Target: chr1 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 36314614 - 36314815
Alignment:
Q  1 ttaacttgcccttcgaggatagctcccatcgtataaacttcccatctttaacttcaaaagcgaaagaatcttcattcttgttagaaacaataatgtactg 100  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36314614 ttaacttgcccttcgaggatagctcccatcatataaacttcccatctttaacttcaaaagcgaaagaatcttcattcttgttagaaacaataatgtactg 36314713  T
Q  101 atacatatgttgaacattcattggaatgttctcgaacattccattgcttttaagttttccacttttccaatacactttgccgcgttttttgatgttcaat 200  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  36314714 atacatatgttgaacattcactggaatgttctcgaacattccattgcttttaagttttccacttttccaatacactttcccgcgttttttgatgttcaat 36314813  T
Q  201 tc 202  Q
    ||    
T  36314814 tc 36314815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 121; Significance: 4e-62; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 26 - 202
Target Start/End: Complemental strand, 19390712 - 19390536
Alignment:
Q  26 ccatcgtataaacttcccatctttaacttcaaaagcgaaagaatcttcattcttgttagaaacaataatgtactgatacatatgttgaacattcattgga 125  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||| ||||||||||| ||||| ||| ||||||||||||  |||    
T  19390712 ccatcgtataaacttcccatctttaacttcgaaagcaaaagaatcttcatccttgttagagacaataatgtattgatatatacgttgaacattcaccgga 19390613  T
Q  126 atgttctcgaacattccattgcttttaagttttccacttttccaatacactttgccgcgttttttgatgttcaattc 202  Q
    ||||||||||| |  |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  19390612 atgttctcgaataaaccattgcttttaagttttccgcttttccaatacactttgccgcgtttcttgatgttcaattc 19390536  T

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Target: chr8; HSP #2
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 12 - 202
Target Start/End: Complemental strand, 19345312 - 19345122
Alignment:
Q  12 ttcgaggatagctcccatcgtataaacttcccatctttaacttcaaaagcgaaagaatcttcattcttgttagaaacaataatgtactgatacatatgtt 111  Q
    ||||||| ||| | |||||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||    
T  19345312 ttcgaggttagttgccatcgtgcaaacttcccatctttaacttcgaaagcgaaagaatcttcattcttgttagagacaataatgtactgatatatacgtt 19345213  T
Q  112 gaacattcattggaatgttctcgaacattccattgcttttaagttttccacttttccaatacactttgccgcgttttttgatgttcaattc 202  Q
    |||| ||| | |||||||||||||| ||||||||||| ||||||||||| |||||||||||| || |||||| ||| ||||||||||||||    
T  19345212 gaactttcgtgggaatgttctcgaatattccattgctattaagttttccgcttttccaatacgctatgccgcttttcttgatgttcaattc 19345122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 9 - 202
Target Start/End: Original strand, 19504028 - 19504221
Alignment:
Q  9 cccttcgaggatagctcccatcgtataaacttcccatctttaacttcaaaagcgaaagaatcttcattcttgttagaaacaataatgtactgatacatat 108  Q
    |||||||||| ||| | |||||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||     
T  19504028 cccttcgaggttagttgccatcgtgcaaacttcccatctttaacttcgaaagcgaaagaatcttcattcttgttagagacaataatgtactgatatatac 19504127  T
Q  109 gttgaacattcattggaatgttctcgaacattccattgcttttaagttttccacttttccaatacactttgccgcgttttttgatgttcaattc 202  Q
    ||||||| ||  | |||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||| |||  | |||||||||||    
T  19504128 gttgaacttttgtgggaatgttctcgaatattccattgcttttaagttttccgcttttccaatgcactttgccgcttttccttatgttcaattc 19504221  T

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Target: chr8; HSP #4
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 26 - 202
Target Start/End: Complemental strand, 19337582 - 19337406
Alignment:
Q  26 ccatcgtataaacttcccatctttaacttcaaaagcgaaagaatcttcattcttgttagaaacaataatgtactgatacatatgttgaacattcattgga 125  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||| || ||| ||||||| |||   |||    
T  19337582 ccatcgtataaatttcccatctttaacttcaaaagcaaaagaatcttcatccttgttagacacaataatgtactggtatatacgttgaactttcgcagga 19337483  T
Q  126 atgttctcgaacattccattgcttttaagttttccacttttccaatacactttgccgcgttttttgatgttcaattc 202  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| | |||  |||||||||||||    
T  19337482 atgttctcgaacattccattgcttttgagttttccacttttccaatgcactttgccacttttcctgatgttcaattc 19337406  T

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Target: chr8; HSP #5
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 2 - 202
Target Start/End: Complemental strand, 19410933 - 19410733
Alignment:
Q  2 taacttgcccttcgaggatagctcccatcgtataaacttcccatctttaacttcaaaagcgaaagaatcttcattcttgttagaaacaataatgtactga 101  Q
    |||||| |||||||||||||| |||||| ||  ||||||||||||||||||||| || | |||||||||||||| ||||||||| |||||||||||||||    
T  19410933 taacttccccttcgaggatagttcccattgtgcaaacttcccatctttaacttcgaacgtgaaagaatcttcatccttgttagagacaataatgtactga 19410834  T
Q  102 tacatatgttgaacattcattggaatgttctcgaacattccattgcttttaagttttccacttttccaatacactttgccgcgttttttgatgttcaatt 201  Q
    ||| ||  |||||||||    ||||| |||||||| | ||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||    
T  19410833 tacctactttgaacattggccggaatattctcgaataatccattgcttttaagttttccgcttttccaatacactttgccgcttttcttgatgttcaatt 19410734  T
Q  202 c 202  Q
    |    
T  19410733 c 19410733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 2 - 202
Target Start/End: Complemental strand, 19457952 - 19457752
Alignment:
Q  2 taacttgcccttcgaggatagctcccatcgtataaacttcccatctttaacttcaaaagcgaaagaatcttcattcttgttagaaacaataatgtactga 101  Q
    |||||| |||||||||||||| |||||| ||  ||||||||||||||||||||| || | |||||||||||||| ||||||||| |||||||||||||||    
T  19457952 taacttccccttcgaggatagttcccattgtgcaaacttcccatctttaacttcgaacgtgaaagaatcttcatccttgttagagacaataatgtactga 19457853  T
Q  102 tacatatgttgaacattcattggaatgttctcgaacattccattgcttttaagttttccacttttccaatacactttgccgcgttttttgatgttcaatt 201  Q
    ||| ||  |||||||||    ||||| |||||||| | ||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||    
T  19457852 tacctactttgaacattggccggaatattctcgaataatccattgcttttaagttttccgcttttccaatacactttgccgcttttcttgatgttcaatt 19457753  T
Q  202 c 202  Q
    |    
T  19457752 c 19457752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 2 - 202
Target Start/End: Original strand, 19523126 - 19523326
Alignment:
Q  2 taacttgcccttcgaggatagctcccatcgtataaacttcccatctttaacttcaaaagcgaaagaatcttcattcttgttagaaacaataatgtactga 101  Q
    |||||| |||||||||||||| |||||| ||  ||||||||||||||||||||| || | |||||||||||||| ||||||||| |||||||||||||||    
T  19523126 taacttccccttcgaggatagttcccattgtgcaaacttcccatctttaacttcgaacgtgaaagaatcttcatccttgttagagacaataatgtactga 19523225  T
Q  102 tacatatgttgaacattcattggaatgttctcgaacattccattgcttttaagttttccacttttccaatacactttgccgcgttttttgatgttcaatt 201  Q
    ||| ||  |||||||||    ||||| |||||||| | ||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||    
T  19523226 tacctactttgaacattggccggaatattctcgaataatccattgcttttaagttttccgcttttccaatacactttgccgcttttcttgatgttcaatt 19523325  T
Q  202 c 202  Q
    |    
T  19523326 c 19523326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 35 - 203
Target Start/End: Original strand, 19469524 - 19469692
Alignment:
Q  35 aaacttcccatctttaacttcaaaagcgaaagaatcttcattcttgttagaaacaataatgtactgatacatatgttgaacattcattggaatgttctcg 134  Q
    ||||||||||||||||||||| || | |||||||||||||| ||||||||| |||||||||||||||||| ||| |||||||||    ||||| ||||||    
T  19469524 aaacttcccatctttaacttcgaacgtgaaagaatcttcatccttgttagagacaataatgtactgatacctattttgaacattggccggaatattctcg 19469623  T
Q  135 aacattccattgcttttaagttttccacttttccaatacactttgccgcgttttttgatgttcaattct 203  Q
    || | ||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||    
T  19469624 aataatccattgcttttaagttttccgcttttccaatacactttgccgcttttcttgatgttcaattct 19469692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 35 - 203
Target Start/End: Original strand, 19540448 - 19540616
Alignment:
Q  35 aaacttcccatctttaacttcaaaagcgaaagaatcttcattcttgttagaaacaataatgtactgatacatatgttgaacattcattggaatgttctcg 134  Q
    ||||||||||||||||||||| || | |||||||||||||| ||||||||| |||||||||||||||||| ||| |||||||||    ||||| ||||||    
T  19540448 aaacttcccatctttaacttcgaacgtgaaagaatcttcatccttgttagagacaataatgtactgatacctattttgaacattggccggaatattctcg 19540547  T
Q  135 aacattccattgcttttaagttttccacttttccaatacactttgccgcgttttttgatgttcaattct 203  Q
    || | ||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||    
T  19540548 aataatccattgcttttaagttttccgcttttccaatacactttgccgcttttcttgatgttcaattct 19540616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 35 - 203
Target Start/End: Complemental strand, 19592250 - 19592082
Alignment:
Q  35 aaacttcccatctttaacttcaaaagcgaaagaatcttcattcttgttagaaacaataatgtactgatacatatgttgaacattcattggaatgttctcg 134  Q
    ||||||||||||||||||||| || | |||||||||||||| ||||||||| |||||||||||||||||| ||| |||||||||    ||||| ||||||    
T  19592250 aaacttcccatctttaacttcgaacgtgaaagaatcttcatccttgttagagacaataatgtactgatacctattttgaacattggccggaatattctcg 19592151  T
Q  135 aacattccattgcttttaagttttccacttttccaatacactttgccgcgttttttgatgttcaattct 203  Q
    || | ||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||    
T  19592150 aataatccattgcttttaagttttccgcttttccaatacactttgccgcttttcttgatgttcaattct 19592082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 57 - 202
Target Start/End: Original strand, 19468610 - 19468755
Alignment:
Q  57 aaagcgaaagaatcttcattcttgttagaaacaataatgtactgatacatatgttgaacattcattggaatgttctcgaacattccattgcttttaagtt 156  Q
    |||| |||||||||||| |  |||||||| ||||||||||||||||||||||||||||||||||  ||||| |||||||| | |||||||||||||||||    
T  19468610 aaagtgaaagaatcttcgtctttgttagagacaataatgtactgatacatatgttgaacattcaccggaatattctcgaataatccattgcttttaagtt 19468709  T
Q  157 ttccacttttccaatacactttgccgcgttttttgatgttcaattc 202  Q
    |||| |||||||||||||||||||||| ||| |||||| |||||||    
T  19468710 ttccgcttttccaatacactttgccgcttttcttgatgatcaattc 19468755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 57 - 202
Target Start/End: Original strand, 19555531 - 19555676
Alignment:
Q  57 aaagcgaaagaatcttcattcttgttagaaacaataatgtactgatacatatgttgaacattcattggaatgttctcgaacattccattgcttttaagtt 156  Q
    |||| |||||||||||| |  |||||||| ||||||||||||||||||||||||||||||||||  ||||| |||||||| | |||||||||||||||||    
T  19555531 aaagtgaaagaatcttcgtctttgttagagacaataatgtactgatacatatgttgaacattcaccggaatattctcgaataatccattgcttttaagtt 19555630  T
Q  157 ttccacttttccaatacactttgccgcgttttttgatgttcaattc 202  Q
    |||| |||||||||||||||||||||| ||| |||||| |||||||    
T  19555631 ttccgcttttccaatacactttgccgcttttcttgatgatcaattc 19555676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 26 - 202
Target Start/End: Complemental strand, 19355602 - 19355426
Alignment:
Q  26 ccatcgtataaacttcccatctttaacttcaaaagcgaaagaatcttcattcttgttagaaacaataatgtactgatacatatgttgaacattcattgga 125  Q
    |||||||||||| |||||||| |||||||| ||||| ||||||||||||| ||||||||| |||||||||||| |||| |||  |||||| |||  ||||    
T  19355602 ccatcgtataaaattcccatcattaacttcgaaagcaaaagaatcttcatccttgttagacacaataatgtaccgatatatactttgaactttcgctgga 19355503  T
Q  126 atgttctcgaacattccattgcttttaagttttccacttttccaatacactttgccgcgttttttgatgttcaattc 202  Q
    ||||||||||| |||||||| ||| |||||||||| |||||||||| ||||||||||| |||  | |||||||||||    
T  19355502 atgttctcgaatattccattacttctaagttttccgcttttccaatgcactttgccgcttttccttatgttcaattc 19355426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 44 - 202
Target Start/End: Original strand, 19172821 - 19172979
Alignment:
Q  44 atctttaacttcaaaagcgaaagaatcttcattcttgttagaaacaataatgtactgatacatatgttgaacattcattggaatgttctcgaacattcca 143  Q
    |||||| | ||| |||| ||| || ||||||| ||||||||| ||||||||||| ||||||| ||||||||| |||| | ||||||||| ||| | ||||    
T  19172821 atctttgatttcgaaagtgaaggagtcttcatccttgttagagacaataatgtattgatacacatgttgaactttcactagaatgttcttgaataatcca 19172920  T
Q  144 ttgcttttaagttttccacttttccaatacactttgccgcgttttttgatgttcaattc 202  Q
    ||||| ||||||||||| |||||||||||||||||||||||||  ||||||||||||||    
T  19172921 ttgctgttaagttttccgcttttccaatacactttgccgcgttgcttgatgttcaattc 19172979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 39 - 198
Target Start/End: Complemental strand, 19376733 - 19376574
Alignment:
Q  39 ttcccatctttaacttcaaaagcgaaagaatcttcattcttgttagaaacaataatgtactgatacatatgttgaacattcattggaatgttctcgaaca 138  Q
    |||| |||||||| |||||||   || |||||||||| ||||||||| ||||| |||||| ||||||||| |||||||||    ||||| |||||||| |    
T  19376733 ttccgatctttaatttcaaaactaaaggaatcttcatccttgttagagacaatgatgtaccgatacatattttgaacattggccggaatattctcgaata 19376634  T
Q  139 ttccattgcttttaagttttccacttttccaatacactttgccgcgttttttgatgttca 198  Q
     ||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||    
T  19376633 atccattgcttttaagttttccgcttttccaatacactttgccgcttttcttgatgttca 19376574  T

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Target: chr8; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 44 - 202
Target Start/End: Complemental strand, 19287825 - 19287667
Alignment:
Q  44 atctttaacttcaaaagcgaaagaatcttcattcttgttagaaacaataatgtactgatacatatgttgaacattcattggaatgttctcgaacattcca 143  Q
    |||||| | ||| |||| ||| || ||||||| ||||||||| ||||||||||| ||||||| | ||||||| |||| ||||||||||||||| |  |||    
T  19287825 atctttgatttcgaaagtgaaggagtcttcatccttgttagagacaataatgtattgatacacacgttgaactttcactggaatgttctcgaataaacca 19287726  T
Q  144 ttgcttttaagttttccacttttccaatacactttgccgcgttttttgatgttcaattc 202  Q
    |||| | || ||||||| |||||||||||||||||||||||||  ||||||||||||||    
T  19287725 ttgcgtctacgttttccgcttttccaatacactttgccgcgttgcttgatgttcaattc 19287667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 57 - 198
Target Start/End: Complemental strand, 19404846 - 19404705
Alignment:
Q  57 aaagcgaaagaatcttcattcttgttagaaacaataatgtactgatacatatgttgaacattcattggaatgttctcgaacattccattgcttttaagtt 156  Q
    |||| |||||||||||||| ||||||||| |||||| |||| |||||||||  |||||||||    ||||| |||||||| | ||||| |||||||||||    
T  19404846 aaagtgaaagaatcttcatccttgttagagacaatagtgtattgatacatagtttgaacattggccggaatattctcgaataatccatcgcttttaagtt 19404747  T
Q  157 ttccacttttccaatacactttgccgcgttttttgatgttca 198  Q
    |||| |||||||||||||||||||| | ||| ||||||||||    
T  19404746 ttccgcttttccaatacactttgcctcttttcttgatgttca 19404705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 69 - 203
Target Start/End: Complemental strand, 19371046 - 19370912
Alignment:
Q  69 tcttcattcttgttagaaacaataatgtactgatacatatgttgaacattcattggaatgttctcgaacattccattgcttttaagttttccacttttcc 168  Q
    |||||||  |||||||| ||||| |||||  |||||| |||||| ||||||  ||||||||||||||| | |||||||||| ||||||||||||||||||    
T  19371046 tcttcatctttgttagagacaatcatgtatcgatacacatgttggacattctctggaatgttctcgaataatccattgcttctaagttttccacttttcc 19370947  T
Q  169 aatacactttgccgcgttttttgatgttcaattct 203  Q
    ||| |||||||||  |||| || ||||||||||||    
T  19370946 aatgcactttgccttgtttcttaatgttcaattct 19370912  T

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Target: chr8; HSP #19
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 69 - 203
Target Start/End: Complemental strand, 19341266 - 19341132
Alignment:
Q  69 tcttcattcttgttagaaacaataatgtactgatacatatgttgaacattcattggaatgttctcgaacattccattgcttttaagttttccacttttcc 168  Q
    |||||||  |||||||| ||||| |||||  |||||| |||||| ||||||  | ||||||||||||| | ||||||||||  |||||||||||||||||    
T  19341266 tcttcatctttgttagagacaatcatgtatcgatacacatgttggacattctctagaatgttctcgaataatccattgcttccaagttttccacttttcc 19341167  T
Q  169 aatacactttgccgcgttttttgatgttcaattct 203  Q
    ||| |||||||||  |||| || ||||||||||||    
T  19341166 aatgcactttgccttgtttcttaatgttcaattct 19341132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 44 - 202
Target Start/End: Complemental strand, 19543177 - 19543019
Alignment:
Q  44 atctttaacttcaaaagcgaaagaatcttcattcttgttagaaacaataatgtactgatacatatgttgaacattcattggaatgttctcgaacattcca 143  Q
    |||||||| || |||||  || ||||||||||  || ||||||||||||||||| | ||||| | |||||||||||   || |||||| |||| |  |||    
T  19543177 atctttaattttaaaagtaaaggaatcttcatctttcttagaaacaataatgtattcatacacacgttgaacattcgccggtatgttcacgaataaccca 19543078  T
Q  144 ttgcttttaagttttccacttttccaatacactttgccgcgttttttgatgttcaattc 202  Q
    || ||| |||||||||| |||||||||||||||||||||| ||| ||||| | ||||||    
T  19543077 tttcttctaagttttccgcttttccaatacactttgccgcttttcttgatttccaattc 19543019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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