View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8208A_high_46 (Length: 231)
Name: NF8208A_high_46
Description: NF8208A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8208A_high_46 |
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Alignment Details
Target: chr7 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 37122681 - 37122908
Alignment:
| Q |
1 |
aactgacaattatccaaccaacttccttctagaatacacttcaagtttccgtacttcttgttcactagcaacatctccctctgtcaaaggaactttgtct |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37122681 |
aactgacaattatccaaccaacttccttctagaatacacttcaagtttccgtacttcttgttcactagcaacatctccctctgtcaaaggaactttgtct |
37122780 |
T |
|
| Q |
101 |
tcaaggttgtagtgagggatttggttttatattatcccaggttgcttcatccttaagtcaattcttcctagtgaataaagtcaactaagtttcttggttc |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
37122781 |
tcaaggttgtagtgagggatttggttttatattatcccaggttgcttcatccttaagtcaattcttcctattgaataaagtcaactaagtttcttggttc |
37122880 |
T |
|
| Q |
201 |
atcacagatatgtttgttaccattcggt |
228 |
Q |
| |
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|||||||||||||||||||||||||||| |
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|
| T |
37122881 |
atcacagatatgtttgttaccattcggt |
37122908 |
T |
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