View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8208A_low_155 (Length: 291)
Name: NF8208A_low_155
Description: NF8208A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8208A_low_155 |
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Alignment Details
Target: chr7 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 8 - 290
Target Start/End: Complemental strand, 7933028 - 7932746
Alignment:
| Q |
8 |
atgaaggggaaaccatggaaattttttggaactgatgatatgccttacctggatcagctgttgcagtcttctcctgtaacaccaattacaaattccgtct |
107 |
Q |
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| T |
7933028 |
atgaaggggaaaccatggaaattttttggaactgatgatatgccttacctggatcagctgttgcagtcttctcctgtaacaccaattacaaattccgtct |
7932929 |
T |
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| Q |
108 |
ctgctcgttgccacctgagagcaataacagcatctaaacgcaaaaaagcaggctctcatcagatatggcatgttctcgtataacttgagtccctattann |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7932928 |
ctgctcgttgccacctgagagcaataacagcatctaaacgcaaaaaagcaggctctcatcagatatggcatgttctcgtataacttgagtccctattatt |
7932829 |
T |
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| Q |
208 |
nnnnnncctcacaaggccgactaaaagtctgataatttgttttacaactttggcttgttgaaggcttttcataatttgatttg |
290 |
Q |
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||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7932828 |
ttttttcctcacaaggctgactaaaagtctgataatttgttttacaactttggcttgttgaaggcttttcataatttgatttg |
7932746 |
T |
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