View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8208A_low_203 (Length: 265)
Name: NF8208A_low_203
Description: NF8208A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8208A_low_203 |
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Alignment Details
Target: chr1 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 7 - 253
Target Start/End: Original strand, 44378503 - 44378747
Alignment:
| Q |
7 |
ataatgagagcatgtttatcagaagaaatcccaggatccttaaataacaaaattcataattagacaaataaaagctagaaattatataaacaaatcaaga |
106 |
Q |
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| T |
44378503 |
ataatgagagcatgtttatcagaagaaatcccaggatccttaaataacaaaattcataattagacaaataaaagctagaaattatataaacaaatcaaga |
44378602 |
T |
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| Q |
107 |
acaagtgaacaacagacttgaaaattaattaacctcaacctcatgatcatatgtcaggagagagatatcagcagccacagaagccgtgtcaaactctgat |
206 |
Q |
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| T |
44378603 |
act--tgaacaacagacttgaaaattaattaacctcaacctcatgatcatatgtcaggagagagatatcagcagccacagaagccgtgtcaaactctgat |
44378700 |
T |
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| Q |
207 |
ggcgtggtgattcttgaagcattcatttgtgaactccgactgatatt |
253 |
Q |
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| T |
44378701 |
ggcgtggtgattcttgaagcattcatttgtgaactccgaccgatatt |
44378747 |
T |
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