View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8208A_low_267 (Length: 248)

Name: NF8208A_low_267
Description: NF8208A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8208A_low_267
NF8208A_low_267
[»] chr2 (37 HSPs)
chr2 (79-212)||(18107892-18108026)
chr2 (83-216)||(4778558-4778694)
chr2 (83-196)||(37994100-37994214)
chr2 (83-194)||(38444994-38445107)
chr2 (84-183)||(32448782-32448882)
chr2 (83-194)||(37876756-37876870)
chr2 (83-194)||(9169416-9169529)
chr2 (83-194)||(7646299-7646414)
chr2 (83-194)||(43397279-43397391)
chr2 (83-194)||(4098930-4099044)
chr2 (83-194)||(7448075-7448188)
chr2 (83-194)||(18763295-18763408)
chr2 (143-216)||(36175662-36175735)
chr2 (147-194)||(1421498-1421545)
chr2 (83-216)||(12648083-12648218)
chr2 (83-194)||(36943282-36943396)
chr2 (83-194)||(11985389-11985502)
chr2 (83-198)||(14955346-14955463)
chr2 (118-199)||(28718143-28718224)
chr2 (141-216)||(5428086-5428162)
chr2 (118-194)||(8809109-8809185)
chr2 (147-194)||(27097630-27097677)
chr2 (83-199)||(10237372-10237490)
chr2 (118-194)||(7678073-7678150)
chr2 (147-216)||(24461244-24461313)
chr2 (83-195)||(30400196-30400312)
chr2 (83-173)||(3308787-3308879)
chr2 (81-166)||(17994872-17994960)
chr2 (83-199)||(29574792-29574910)
chr2 (83-194)||(31788283-31788397)
chr2 (79-122)||(33923603-33923646)
chr2 (79-167)||(1415419-1415509)
chr2 (79-183)||(6436446-6436552)
chr2 (117-194)||(12677490-12677568)
chr2 (118-216)||(19029102-19029200)
chr2 (148-194)||(31128974-31129020)
chr2 (156-193)||(36691695-36691732)
[»] scaffold0603 (1 HSPs)
scaffold0603 (83-199)||(7529-7646)
[»] chr5 (21 HSPs)
chr5 (79-194)||(38007174-38007290)
chr5 (83-199)||(2979471-2979589)
chr5 (83-194)||(7036044-7036158)
chr5 (83-194)||(38597614-38597727)
chr5 (84-194)||(6012297-6012410)
chr5 (83-194)||(26878237-26878350)
chr5 (83-194)||(13007045-13007159)
chr5 (83-199)||(39567107-39567225)
chr5 (83-199)||(14211045-14211160)
chr5 (84-216)||(26825223-26825360)
chr5 (83-194)||(15571302-15571416)
chr5 (83-194)||(34945238-34945352)
chr5 (117-194)||(31391951-31392029)
chr5 (83-190)||(8096656-8096764)
chr5 (83-194)||(9113883-9113997)
chr5 (83-166)||(41630350-41630432)
chr5 (100-190)||(35850605-35850697)
chr5 (147-194)||(25979974-25980021)
chr5 (137-190)||(6216715-6216769)
chr5 (83-188)||(8088371-8088477)
chr5 (141-194)||(11074118-11074172)
[»] chr3 (40 HSPs)
chr3 (83-194)||(21431442-21431555)
chr3 (83-194)||(52923275-52923387)
chr3 (84-194)||(9998283-9998397)
chr3 (84-194)||(10232887-10233000)
chr3 (147-216)||(953632-953701)
chr3 (84-194)||(10108055-10108166)
chr3 (83-194)||(26275952-26276065)
chr3 (83-194)||(35865092-35865205)
chr3 (84-194)||(40487142-40487254)
chr3 (83-166)||(53508067-53508151)
chr3 (83-194)||(6954854-6954968)
chr3 (83-194)||(45568602-45568716)
chr3 (83-194)||(47895968-47896082)
chr3 (83-194)||(54148805-54148919)
chr3 (84-216)||(10229269-10229406)
chr3 (87-194)||(20465132-20465239)
chr3 (118-216)||(38142366-38142465)
chr3 (147-194)||(38545652-38545699)
chr3 (83-186)||(47042210-47042316)
chr3 (132-194)||(48650944-48651007)
chr3 (118-199)||(629101-629183)
chr3 (87-199)||(16235231-16235344)
chr3 (147-216)||(40556506-40556575)
chr3 (83-173)||(43488748-43488840)
chr3 (83-194)||(21533967-21534080)
chr3 (147-194)||(32701315-32701362)
chr3 (83-194)||(36461589-36461703)
chr3 (118-199)||(7546422-7546504)
chr3 (118-199)||(8914516-8914598)
chr3 (118-199)||(21290014-21290096)
chr3 (147-199)||(29921864-29921917)
chr3 (147-199)||(29971017-29971070)
chr3 (83-194)||(33579685-33579798)
chr3 (83-194)||(46220495-46220608)
chr3 (147-195)||(4821623-4821671)
chr3 (137-199)||(20609111-20609174)
chr3 (87-195)||(23800071-23800184)
chr3 (156-214)||(42456300-42456358)
chr3 (147-199)||(14859309-14859361)
chr3 (83-216)||(22290733-22290868)
[»] chr1 (36 HSPs)
chr1 (79-216)||(18939120-18939258)
chr1 (79-194)||(34878426-34878543)
chr1 (83-216)||(45789363-45789497)
chr1 (83-194)||(32394819-32394932)
chr1 (83-199)||(15492109-15492224)
chr1 (83-194)||(29738794-29738908)
chr1 (78-216)||(10776611-10776754)
chr1 (83-216)||(49626708-49626843)
chr1 (79-215)||(31317550-31317688)
chr1 (83-194)||(11462605-11462720)
chr1 (83-194)||(45415379-45415493)
chr1 (85-194)||(51916812-51916924)
chr1 (97-199)||(9341539-9341643)
chr1 (83-195)||(940184-940298)
chr1 (119-195)||(3228089-3228166)
chr1 (83-194)||(15836013-15836126)
chr1 (149-194)||(41177002-41177047)
chr1 (147-194)||(35484603-35484650)
chr1 (83-194)||(7337821-7337935)
chr1 (85-192)||(43412194-43412301)
chr1 (83-216)||(44543071-44543204)
chr1 (83-195)||(50377147-50377259)
chr1 (83-194)||(35462195-35462310)
chr1 (83-193)||(15435031-15435143)
chr1 (147-199)||(32679324-32679376)
chr1 (147-194)||(44915465-44915513)
chr1 (84-170)||(40646561-40646647)
chr1 (83-191)||(1742104-1742214)
chr1 (147-193)||(7836991-7837037)
chr1 (83-194)||(23291801-23291917)
chr1 (83-199)||(48750005-48750122)
chr1 (87-194)||(14872459-14872570)
chr1 (79-128)||(34479380-34479429)
chr1 (81-197)||(34528536-34528652)
chr1 (147-216)||(47132713-47132781)
chr1 (83-199)||(34413249-34413368)
[»] chr4 (37 HSPs)
chr4 (79-207)||(12199847-12199975)
chr4 (83-194)||(22611021-22611134)
chr4 (83-194)||(26633829-26633942)
chr4 (83-194)||(19853670-19853783)
chr4 (83-216)||(22558622-22558759)
chr4 (83-194)||(21686399-21686512)
chr4 (83-194)||(2520614-2520728)
chr4 (83-194)||(53810865-53810979)
chr4 (82-195)||(2437441-2437554)
chr4 (78-194)||(9178194-9178313)
chr4 (84-216)||(22300660-22300794)
chr4 (83-195)||(27651784-27651898)
chr4 (83-216)||(4142913-4143048)
chr4 (83-216)||(10496157-10496292)
chr4 (83-215)||(36204540-36204673)
chr4 (87-178)||(36161567-36161658)
chr4 (147-199)||(43095466-43095518)
chr4 (83-191)||(56040802-56040915)
chr4 (83-194)||(13633951-13634066)
chr4 (147-196)||(51888441-51888490)
chr4 (83-198)||(22038959-22039074)
chr4 (83-190)||(32766355-32766465)
chr4 (78-194)||(9165195-9165315)
chr4 (83-199)||(36194545-36194663)
chr4 (83-194)||(54021698-54021812)
chr4 (83-190)||(5119179-5119290)
chr4 (83-190)||(35348147-35348256)
chr4 (141-190)||(53443967-53444016)
chr4 (139-194)||(21662322-21662377)
chr4 (139-194)||(21671086-21671141)
chr4 (147-194)||(33920889-33920936)
chr4 (79-189)||(37030107-37030218)
chr4 (83-194)||(43510036-43510150)
chr4 (83-199)||(18935619-18935736)
chr4 (121-194)||(48257647-48257721)
chr4 (83-194)||(24099228-24099343)
chr4 (132-164)||(10259104-10259136)
[»] chr7 (34 HSPs)
chr7 (83-200)||(26610903-26611019)
chr7 (83-193)||(19404913-19405025)
chr7 (79-167)||(25255084-25255173)
chr7 (83-190)||(37837617-37837726)
chr7 (79-199)||(22087131-22087248)
chr7 (83-195)||(47590132-47590244)
chr7 (83-191)||(48316970-48317081)
chr7 (79-194)||(39328947-39329065)
chr7 (83-216)||(9450295-9450431)
chr7 (82-206)||(5348746-5348867)
chr7 (83-199)||(22742752-22742870)
chr7 (76-216)||(25067883-25068024)
chr7 (79-170)||(38798630-38798723)
chr7 (84-171)||(45349962-45350051)
chr7 (83-195)||(30756977-30757092)
chr7 (88-199)||(38051231-38051343)
chr7 (85-194)||(39171751-39171864)
chr7 (147-194)||(42978427-42978474)
chr7 (83-199)||(24351002-24351120)
chr7 (83-199)||(35132765-35132883)
chr7 (83-199)||(1749302-1749418)
chr7 (83-194)||(12141465-12141580)
chr7 (87-195)||(13797094-13797204)
chr7 (118-195)||(19296696-19296774)
chr7 (83-194)||(48061241-48061356)
chr7 (83-165)||(34899765-34899850)
chr7 (83-189)||(44311955-44312060)
chr7 (154-199)||(3106285-3106330)
chr7 (147-216)||(4529876-4529945)
chr7 (118-194)||(8013660-8013737)
chr7 (83-194)||(24770074-24770187)
chr7 (120-199)||(5078590-5078670)
chr7 (148-216)||(10021282-10021350)
chr7 (87-198)||(11343615-11343726)
[»] chr8 (36 HSPs)
chr8 (83-194)||(31013727-31013841)
chr8 (97-194)||(17693784-17693883)
chr8 (92-216)||(8980994-8981121)
chr8 (85-216)||(29937912-29938045)
chr8 (120-183)||(14916332-14916395)
chr8 (118-216)||(15344103-15344202)
chr8 (118-216)||(15433168-15433267)
chr8 (118-216)||(15524472-15524571)
chr8 (118-199)||(1236886-1236968)
chr8 (147-217)||(7677503-7677573)
chr8 (1-55)||(33347590-33347644)
chr8 (78-194)||(3673265-3673382)
chr8 (83-206)||(18890862-18890987)
chr8 (83-194)||(25191223-25191336)
chr8 (83-206)||(7883396-7883522)
chr8 (147-194)||(10377516-10377563)
chr8 (85-194)||(23230463-23230575)
chr8 (83-194)||(27110620-27110734)
chr8 (86-194)||(33214791-33214901)
chr8 (79-166)||(5046597-5046686)
chr8 (83-196)||(24099419-24099532)
chr8 (85-189)||(28897535-28897642)
chr8 (83-216)||(37971092-37971225)
chr8 (118-199)||(1239596-1239678)
chr8 (147-212)||(8443744-8443808)
chr8 (83-190)||(14545058-14545169)
chr8 (83-190)||(20559902-20560010)
chr8 (83-190)||(20571464-20571572)
chr8 (147-194)||(8412572-8412619)
chr8 (83-216)||(40211461-40211598)
chr8 (83-189)||(20227442-20227547)
chr8 (83-183)||(41896344-41896443)
chr8 (154-199)||(27498565-27498610)
chr8 (141-198)||(40619288-40619345)
chr8 (147-199)||(3240189-3240241)
chr8 (146-190)||(20553467-20553511)
[»] chr6 (22 HSPs)
chr6 (83-194)||(12170313-12170427)
chr6 (83-194)||(33053326-33053440)
chr6 (83-195)||(30608672-30608785)
chr6 (83-194)||(23128436-23128550)
chr6 (82-199)||(4010659-4010777)
chr6 (83-194)||(68159-68272)
chr6 (116-199)||(32191925-32192009)
chr6 (83-194)||(606022-606136)
chr6 (83-193)||(32059728-32059839)
chr6 (83-194)||(34018378-34018492)
chr6 (83-194)||(3913732-3913845)
chr6 (118-199)||(7976360-7976441)
chr6 (80-195)||(20220726-20220842)
chr6 (80-195)||(22114710-22114826)
chr6 (97-199)||(545838-545941)
chr6 (83-190)||(30894458-30894568)
chr6 (132-194)||(32328792-32328855)
chr6 (118-194)||(29320057-29320134)
chr6 (111-190)||(127499-127576)
chr6 (147-216)||(27097835-27097904)
chr6 (83-170)||(7876166-7876253)
chr6 (132-199)||(14801632-14801700)
[»] scaffold0088 (1 HSPs)
scaffold0088 (83-216)||(50581-50717)
[»] scaffold0127 (1 HSPs)
scaffold0127 (85-194)||(15309-15420)
[»] scaffold0049 (1 HSPs)
scaffold0049 (83-189)||(71443-71549)
[»] scaffold0262 (1 HSPs)
scaffold0262 (83-194)||(1976-2089)
[»] scaffold0026 (1 HSPs)
scaffold0026 (83-194)||(72022-72136)
[»] scaffold0445 (1 HSPs)
scaffold0445 (83-195)||(1160-1274)
[»] scaffold0554 (1 HSPs)
scaffold0554 (83-187)||(10703-10807)
[»] scaffold0009 (1 HSPs)
scaffold0009 (83-216)||(58238-58373)
[»] scaffold0492 (1 HSPs)
scaffold0492 (83-194)||(12733-12846)
[»] scaffold0064 (1 HSPs)
scaffold0064 (132-195)||(19246-19309)
[»] scaffold0884 (1 HSPs)
scaffold0884 (88-190)||(2134-2240)
[»] scaffold0087 (1 HSPs)
scaffold0087 (119-190)||(25525-25597)
[»] scaffold0888 (1 HSPs)
scaffold0888 (83-196)||(1833-1948)
[»] scaffold0219 (1 HSPs)
scaffold0219 (85-216)||(14998-15132)
[»] scaffold0017 (1 HSPs)
scaffold0017 (83-194)||(32906-33020)


Alignment Details
Target: chr2 (Bit Score: 67; Significance: 7e-30; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 79 - 212
Target Start/End: Original strand, 18107892 - 18108026
Alignment:
Q  79 tatgtgtgaaaaccactcatttaaattgaaagaaataggaaaaagatgcatatgggtcattttaggtcaaaa-atgacctaaaaccacccctcctcaatg 177  Q
    ||||||||||||||||| |||||| ||||||||||  || |||||||||| |  ||| ||| |||||||||| ||||||||||||||||  |||||||||    
T  18107892 tatgtgtgaaaaccacttatttaatttgaaagaaaggggtaaaagatgcaaagaggtgattctaggtcaaaaaatgacctaaaaccaccattcctcaatg 18107991  T
Q  178 aatgaaggagaaagaaaacttataaagaaagtgga 212  Q
    |||||| ||||||||||||||| | ||||||||||    
T  18107992 aatgaaagagaaagaaaacttagagagaaagtgga 18108026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 83 - 216
Target Start/End: Complemental strand, 4778694 - 4778558
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaaaa--gatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaa 179  Q
    ||||||||||||| |||||||||||||||||  |||||||  |||| | | |||| ||| ||||||||||| |||||||||||||||||||||| |||||    
T  4778694 tgtgaaaaccacttatttaaattgaaagaaaagggaaaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaa 4778595  T
Q  180 tgaaggagaaagaaaacttataaagaaagtggagttt 216  Q
     ||||||||||||||  ||| ||||||  ||||||||    
T  4778594 cgaaggagaaagaaagtttagaaagaagttggagttt 4778558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 83 - 196
Target Start/End: Complemental strand, 37994214 - 37994100
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaa-aagatgcatatgggtcattttaggtcaaaaatgacctaaaaccacccctcctcaatgaatg 181  Q
    |||||||| |||| |||||||| ||||||||  ||||| || ||||| | |||| ||| ||||||||||||||||||||||||||| ||||| |||| ||    
T  37994214 tgtgaaaatcacttatttaaatcgaaagaaaggggaaacaaaatgcagaggggtgattctaggtcaaaaatgacctaaaaccacccttcctcgatgattg 37994115  T
Q  182 aaggagaaagaaaac 196  Q
    || ||||||||||||    
T  37994114 aaagagaaagaaaac 37994100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 38445107 - 38444994
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg--aaaaagatgcatatgggtcattttaggtcaaaaatgacctaaaaccacccctcctcaatgaat 180  Q
    ||||||||||||| ||||| ||||||||||| |||  ||||||||| | | |||| ||| ||| |||||||||||||||||||||| ||| || |||||     
T  38445107 tgtgaaaaccacttatttatattgaaagaaaaagggaaaaaagatgtagaggggtgattctagatcaaaaatgacctaaaaccacctctcatcgatgaac 38445008  T
Q  181 gaaggagaaagaaa 194  Q
    ||||||||||||||    
T  38445007 gaaggagaaagaaa 38444994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 84 - 183
Target Start/End: Original strand, 32448782 - 32448882
Alignment:
Q  84 gtgaaaaccactcatttaaattgaaagaaataggaaaaagatgcatatgggtcattttaggtcaaa-aatgacctaaaaccacccctcctcaatgaatga 182  Q
    ||||||| |||| ||||| || ||||||||  ||||||||||||| | |||| ||||||||||||| |||||||||||||||||||||||| |||| |||    
T  32448782 gtgaaaatcacttatttagatcgaaagaaaggggaaaaagatgcagaggggtgattttaggtcaaataatgacctaaaaccacccctcctcgatgagtga 32448881  T
Q  183 a 183  Q
    |    
T  32448882 a 32448882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 194
Target Start/End: Original strand, 37876756 - 37876870
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg--aaaaagatgcatatgggtcattttaggtcaaaaat-gacctaaaaccacccctcctcaatgaa 179  Q
    ||||||||||||| ||||| ||| ||||||| |||  ||||||||| | | |||| ||| |||||||||||| ||||||||||||||||||||| |||||    
T  37876756 tgtgaaaaccacttatttagattaaaagaaaaaggggaaaaagatgtacaagggtgattctaggtcaaaaattgacctaaaaccacccctcctcgatgaa 37876855  T
Q  180 tgaaggagaaagaaa 194  Q
     |||| |||||||||    
T  37876856 cgaagaagaaagaaa 37876870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 83 - 194
Target Start/End: Original strand, 9169416 - 9169529
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaaaaga--tgcatatgggtcattttaggtcaaaaatgacctaaaaccacccctcctcaatgaat 180  Q
    ||||||||||||| ||||| |||||||||||  ||||||| |  || | | |||| ||| ||||||||||||||||||||||||||||||||| || ||     
T  9169416 tgtgaaaaccacttatttagattgaaagaaaagggaaaaaaaaatgtagaggggtgattctaggtcaaaaatgacctaaaaccacccctcctcgataaac 9169515  T
Q  181 gaaggagaaagaaa 194  Q
    ||| ||||||||||    
T  9169516 gaatgagaaagaaa 9169529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 7646414 - 7646299
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg---aaaaagatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatga 178  Q
    ||||||||||||| ||||| || ||||||||  ||   ||||||||| | | |||| ||| ||||||||||| |||||||||||||||||||||| ||||    
T  7646414 tgtgaaaaccacttatttagatcgaaagaaaaggggaaaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatga 7646315  T
Q  179 atgaaggagaaagaaa 194  Q
    | ||||||||||||||    
T  7646314 acgaaggagaaagaaa 7646299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 83 - 194
Target Start/End: Original strand, 43397279 - 43397391
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaaaagatgcatatgggtcattttaggtc-aaaaatgacctaaaaccacccctcctcaatgaatg 181  Q
    ||||||||||||| ||||| |||||||||||  ||||||||||| | |  ||| ||| |||||| ||||||||||||||||||||||| ||| ||||| |    
T  43397279 tgtgaaaaccacttatttagattgaaagaaaagggaaaaagatgtagagaggtgattctaggtcaaaaaatgacctaaaaccaccccttctcgatgaacg 43397378  T
Q  182 aaggagaaagaaa 194  Q
    ||| | |||||||    
T  43397379 aagaaaaaagaaa 43397391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 4099044 - 4098930
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg--aaaaagatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaa 179  Q
    ||||||||||||| ||||| |||||||||||  ||  ||||||||| | |||||| ||| ||||||||||| ||||||||| |||||| ||||| |||||    
T  4099044 tgtgaaaaccacttatttagattgaaagaaaaggggaaaaaagatgtagatgggtgattctaggtcaaaaaatgacctaaagccacccttcctcgatgaa 4098945  T
Q  180 tgaaggagaaagaaa 194  Q
     ||| ||||||||||    
T  4098944 ggaaagagaaagaaa 4098930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 7448188 - 7448075
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg-aaaaagatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaat 180  Q
    ||||||||||| | ||||| |||||||||||  || ||||||||| | | |||| ||| |||| |||||| |||||||||||||||||||||| |||||     
T  7448188 tgtgaaaaccatttatttagattgaaagaaaaggggaaaaagatgtagaggggtgattctaggacaaaaaatgacctaaaaccacccctcctcgatgaac 7448089  T
Q  181 gaaggagaaagaaa 194  Q
    |||||| |||||||    
T  7448088 gaaggaaaaagaaa 7448075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 18763408 - 18763295
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg-aaaaagatgcatatgggtcattttaggtc-aaaaatgacctaaaaccacccctcctcaatgaat 180  Q
    ||||||||||||| ||||| |||||||||||  || ||||||||| | | |||| ||| |||||| ||||||||| |||||||||| |||||| ||| ||    
T  18763408 tgtgaaaaccacttatttagattgaaagaaaagggaaaaaagatgtagaggggtgattctaggtcaaaaaatgacataaaaccacctctcctcgatggat 18763309  T
Q  181 gaaggagaaagaaa 194  Q
    ||||| ||||||||    
T  18763308 gaaggtgaaagaaa 18763295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 143 - 216
Target Start/End: Original strand, 36175662 - 36175735
Alignment:
Q  143 ggtcaaaaatgacctaaaaccacccctcctcaatgaatgaaggagaaagaaaacttataaagaaagtggagttt 216  Q
    |||||||||||||||||||||||| || ||  ||||||||||||||||||||||||| | |||| ||| |||||    
T  36175662 ggtcaaaaatgacctaaaaccacctcttcttgatgaatgaaggagaaagaaaacttagagagaatgtgaagttt 36175735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 147 - 194
Target Start/End: Complemental strand, 1421545 - 1421498
Alignment:
Q  147 aaaaatgacctaaaaccacccctcctcaatgaatgaaggagaaagaaa 194  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  1421545 aaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaa 1421498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 83 - 216
Target Start/End: Original strand, 12648083 - 12648218
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaat-aggaaaaagatgcatatgggtcattttaggtcaaaa-atgacctaaaaccacccctcctcaatgaat 180  Q
    |||| ||| |||| ||||| |||||||||||  || |||||||||   | |||| ||| |||||||||| ||||||||||||||||||||||||| || |    
T  12648083 tgtggaaatcacttatttagattgaaagaaaagagaaaaaagatgtggaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcaacgagt 12648182  T
Q  181 gaaggagaaagaaaacttataaagaaagtggagttt 216  Q
     || ||||||||||||||| | ||||  ||||||||    
T  12648183 aaaagagaaagaaaacttaaagagaagttggagttt 12648218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 83 - 194
Target Start/End: Original strand, 36943282 - 36943396
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaat-aggaaaaa-gatgcatatgggtcattttaggtcaaaa-atgacctaaaaccacccctcctcaatgaa 179  Q
    ||||||||| ||| ||||| |||||||||||  |||||||| |||| | |  ||| ||| |||||||||| ||||||||||||||||||||||| || ||    
T  36943282 tgtgaaaactacttatttagattgaaagaaaagaggaaaaaagatgtagagtggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatcaa 36943381  T
Q  180 tgaaggagaaagaaa 194  Q
     ||||||||||||||    
T  36943382 cgaaggagaaagaaa 36943396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 194
Target Start/End: Original strand, 11985389 - 11985502
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaag-aaataggaaaaagatgcatatgggtcattttagg-tcaaaaatgacctaaaaccacccctcctcaatgaat 180  Q
    ||||||||||||| |||||||||||||| |||  |||||||| || | | |||| ||| |||| | ||||||||| |||||||||| |||||| | ||||    
T  11985389 tgtgaaaaccacttatttaaattgaaagaaaaggggaaaaagttgtagaggggtgattctaggttaaaaaatgacttaaaaccaccactcctcgaagaat 11985488  T
Q  181 gaaggagaaagaaa 194  Q
    ||| ||||||||||    
T  11985489 gaaagagaaagaaa 11985502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 198
Target Start/End: Complemental strand, 14955463 - 14955346
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaaaa-gatgcatatgggtcattttaggtcaaaaat-gacctaaaaccacccctcctcaatgaat 180  Q
    |||| ||| |||| ||||| ||||||||||| |||||||| |||||| | || | ||| |||||||||||| ||| ||||| ||||||||||| |||| |    
T  14955463 tgtggaaatcacttatttagattgaaagaaagaggaaaaaagatgcagagggatgattctaggtcaaaaattgacttaaaatcacccctcctcgatgagt 14955364  T
Q  181 gaaggagaaagaaaactt 198  Q
    ||| ||| ||||||||||    
T  14955363 gaaagaggaagaaaactt 14955346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 199
Target Start/End: Original strand, 28718143 - 28718224
Alignment:
Q  118 aaaaagatgcatatgggtcattttaggtcaaaaatgacctaaaaccacccctcctcaatgaatgaaggagaaagaaaactta 199  Q
    ||||||||||| |||  | ||| || |||||||||||||||||||||||||| |||||||| | || || ||||||||||||    
T  28718143 aaaaagatgcagatgaatgattctatgtcaaaaatgacctaaaaccaccccttctcaatgagttaaagataaagaaaactta 28718224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 216
Target Start/End: Original strand, 5428086 - 5428162
Alignment:
Q  141 taggtcaaaaatga-cctaaaaccacccctcctcaatgaatgaaggagaaagaaaacttataaagaaagtggagttt 216  Q
    |||||||||||| | ||||||||||||||||||| ||||| ||||||||||||||| ||| | ||||  ||||||||    
T  5428086 taggtcaaaaattaacctaaaaccacccctcctcgatgaacgaaggagaaagaaaatttagagagaagttggagttt 5428162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 8809185 - 8809109
Alignment:
Q  118 aaaaagatgcatatgggtcattttaggtcaaaaatgacctaaaaccacccctcctcaatgaatgaaggagaaagaaa 194  Q
    ||||||||| | | |||| |||||||||||||||||| |||||||||||  ||||| | | ||||||||||||||||    
T  8809185 aaaaagatgtagaggggtgattttaggtcaaaaatgatctaaaaccacctgtcctcgacgtatgaaggagaaagaaa 8809109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 194
Target Start/End: Original strand, 27097630 - 27097677
Alignment:
Q  147 aaaaatgacctaaaaccacccctcctcaatgaatgaaggagaaagaaa 194  Q
    ||||||||||||||| ||||||||||| ||||| ||||||||||||||    
T  27097630 aaaaatgacctaaaatcacccctcctcgatgaacgaaggagaaagaaa 27097677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 199
Target Start/End: Original strand, 10237372 - 10237490
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaaaa-gatgcatatgggtcattttaggtcaaaaat-gacctaaaaccacccctcctcaatgaat 180  Q
    |||||||| |||| ||||| |||||||||||  ||||||| |||| | | |||| ||| |||||||||||| ||||||||| |||| || ||| |||| |    
T  10237372 tgtgaaaatcacttatttagattgaaagaaaggggaaaaaagatgtagaggggtgattctaggtcaaaaattgacctaaaatcacctctactcgatgagt 10237471  T
Q  181 gaaggagaaagaaaactta 199  Q
    ||| ||| |||||||||||    
T  10237472 gaaagaggaagaaaactta 10237490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 7678073 - 7678150
Alignment:
Q  118 aaaaagatgcatatgggtcattttaggtcaaaa-atgacctaaaaccacccctcctcaatgaatgaaggagaaagaaa 194  Q
    ||||||||| | | |||| ||| |||||||||| |||||||||||||||||||| || || || ||||||||||||||    
T  7678073 aaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcatcgatcaacgaaggagaaagaaa 7678150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 24461313 - 24461244
Alignment:
Q  147 aaaaatgacctaaaaccacccctcctcaatgaatgaaggagaaagaaaacttataaagaaagtggagttt 216  Q
    |||||||||||||||||||||||||| ||||| |||| |||||  |||||||| | ||||  ||||||||    
T  24461313 aaaaatgacctaaaaccacccctccttaatgagtgaaagagaataaaaacttagagagaagttggagttt 24461244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 195
Target Start/End: Original strand, 30400196 - 30400312
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaaaa--gatgcatatgg-gtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatga 178  Q
    |||||||| |||| ||||| ||| ||||||| || |||||  |||| | |||| || ||||||||||||||| ||| ||||||||||| || ||| ||||    
T  30400196 tgtgaaaaacacttatttagattaaaagaaaaagaaaaaaaagatgtagatggagtgattttaggtcaaaaaatgatctaaaaccacctcttctcgatga 30400295  T
Q  179 atgaaggagaaagaaaa 195  Q
    |||||||||||| ||||    
T  30400296 atgaaggagaaaaaaaa 30400312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 173
Target Start/End: Complemental strand, 3308879 - 3308787
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaaaa-gatgcatatgggtcattttaggtcaaaaat-gacctaaaaccacccctcctc 173  Q
    |||||||| |||| ||||| ||||||| |||  ||||||| |||||| | |||| ||| |||||||||||| ||||||||| |||||||||||    
T  3308879 tgtgaaaatcacttatttagattgaaataaaggggaaaaaagatgcaaaggggtgattctaggtcaaaaattgacctaaaatcacccctcctc 3308787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 166
Target Start/End: Original strand, 17994872 - 17994960
Alignment:
Q  81 tgtgtgaaaaccactcatttaaattgaaag-aaatagg-aaaaagatgcatatgggtcattttaggtc-aaaaatgacctaaaaccacc 166  Q
    ||||||||||||||| ||| | |||||||| ||||||| ||||||||||| |  ||| |||||||| | ||||||||||||||||||||    
T  17994872 tgtgtgaaaaccacttattaagattgaaagaaaataggaaaaaagatgcagagaggtgattttagggcaaaaaatgacctaaaaccacc 17994960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 199
Target Start/End: Original strand, 29574792 - 29574910
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaaaa--gatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaa 179  Q
    |||| ||| |||| ||||| |||||||||||  |||||||  |||||| | |||| ||| ||||||||||| ||| |||||||||||||||||| | ||     
T  29574792 tgtggaaatcacttatttagattgaaagaaaatggaaaaaaggatgcaca-gggtgattctaggtcaaaaaatgatctaaaaccacccctcctcgacgag 29574890  T
Q  180 tgaaggagaaagaaaactta 199  Q
    |||| |||||| ||||||||    
T  29574891 tgaaagagaaataaaactta 29574910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 31788397 - 31788283
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg--aaaaagatgcatatgggtcattttaggtc-aaaaatgacctaaaaccacccctcctcaatgaa 179  Q
    |||||||| |||| ||||| |||||||||||  ||  ||||||||| | | |||| ||| |||||| |||||| |||||||||| || |||||| |||||    
T  31788397 tgtgaaaatcacttatttagattgaaagaaaatgggaaaaaagatgtagaggggtgattctaggtcaaaaaattacctaaaaccgcctctcctcgatgaa 31788298  T
Q  180 tgaaggagaaagaaa 194  Q
     |||| |||||||||    
T  31788297 cgaagaagaaagaaa 31788283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 122
Target Start/End: Complemental strand, 33923646 - 33923603
Alignment:
Q  79 tatgtgtgaaaaccactcatttaaattgaaagaaataggaaaaa 122  Q
    ||||||||||||||||| |||||||||||||||||  |||||||    
T  33923646 tatgtgtgaaaaccacttatttaaattgaaagaaaagggaaaaa 33923603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 167
Target Start/End: Complemental strand, 1415509 - 1415419
Alignment:
Q  79 tatgtgtgaaaaccactcatttaaattgaaagaaatagg-aaaaagatgcatatgggtcattttaggtc-aaaaatgacctaaaaccaccc 167  Q
    |||||||||||| |||| |||||||||||||||||  || ||||||||| | | |||| ||| ||| || |||||| ||||||||||||||    
T  1415509 tatgtgtgaaaatcacttatttaaattgaaagaaaagggaaaaaagatgtagaggggtgattctagatcaaaaaataacctaaaaccaccc 1415419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 183
Target Start/End: Complemental strand, 6436552 - 6436446
Alignment:
Q  79 tatgtgtgaaaaccactcatttaaattgaaagaaat-aggaaaaagatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaat 176  Q
    |||||||||||| |||| ||||| || ||||||||| ||||||||  |||| | |||| ||| || |||||||| |||||||||| |||||||| | |||    
T  6436552 tatgtgtgaaaatcacttatttagatcgaaagaaatgaggaaaaatgtgcagaggggtgattctatgtcaaaaaatgacctaaaatcacccctctttaat 6436453  T
Q  177 gaatgaa 183  Q
    || ||||    
T  6436452 gattgaa 6436446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 194
Target Start/End: Original strand, 12677490 - 12677568
Alignment:
Q  117 gaaaaagatgcatatgggtcattttaggtcaaaa-atgacctaaaaccacccctcctcaatgaatgaaggagaaagaaa 194  Q
    |||||||||| | | |||| ||| |||||||||| ||||||| |||| |||||||||| |||||  |||||||||||||    
T  12677490 gaaaaagatgtagaggggtgattctaggtcaaaaaatgaccttaaactacccctcctcgatgaacaaaggagaaagaaa 12677568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 216
Target Start/End: Original strand, 19029102 - 19029200
Alignment:
Q  118 aaaaagatgcatatgggtcattttaggtcaaaaatgacctaaaaccacccctcctcaatgaatgaaggagaaagaaaacttataaagaaagtggagttt 216  Q
    ||||||||| | |||||| ||| |||||||||||||| | |||||||||| || || ||||| ||| |||||| ||| |||| | ||||| | ||||||    
T  19029102 aaaaagatggagatgggtgattctaggtcaaaaatgatccaaaaccacccatcttcgatgaacgaaagagaaaaaaagcttagagagaaattagagttt 19029200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 194
Target Start/End: Original strand, 31128974 - 31129020
Alignment:
Q  148 aaaatgacctaaaaccacccctcctcaatgaatgaaggagaaagaaa 194  Q
    |||||||||||||| ||||||||||| || || ||||||||||||||    
T  31128974 aaaatgacctaaaatcacccctcctcgatcaacgaaggagaaagaaa 31129020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 193
Target Start/End: Complemental strand, 36691732 - 36691695
Alignment:
Q  156 ctaaaaccacccctcctcaatgaatgaaggagaaagaa 193  Q
    ||||||||||||||||||||| || |||||||||||||    
T  36691732 ctaaaaccacccctcctcaattaaggaaggagaaagaa 36691695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 83 - 199
Target Start/End: Complemental strand, 7646 - 7529
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaaaagatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaatg 181  Q
    ||||||||||||| |||||||||||||||||  || |||||||||| ||| || ||| ||||||||||| ||||||||||||| |||||||| ||||||     
T  7646 tgtgaaaaccacttatttaaattgaaagaaaggggtaaaagatgcagatgagtgattctaggtcaaaaaatgacctaaaaccatccctcctcgatgaata 7547  T
Q  182 aaggagaaagaaaactta 199  Q
    ||||||||||||||||||    
T  7546 aaggagaaagaaaactta 7529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 1e-28; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 79 - 194
Target Start/End: Complemental strand, 38007290 - 38007174
Alignment:
Q  79 tatgtgtgaaaaccactcatttaaattgaaagaaataggaaaaagatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatg 177  Q
    ||||||||||||||||| |||||||||||||||||  ||||||||||| | | |||| |||  |||||||||| |||||||||||||||||||||| |||    
T  38007290 tatgtgtgaaaaccacttatttaaattgaaagaaaagggaaaaagatgtagaggggtgattcgaggtcaaaaaatgacctaaaaccacccctcctcgatg 38007191  T
Q  178 aatgaaggagaaagaaa 194  Q
    || ||||||||||||||    
T  38007190 aacgaaggagaaagaaa 38007174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 83 - 199
Target Start/End: Original strand, 2979471 - 2979589
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaaaa-gatgcatatgggtcattttaggtcaaaaat-gacctaaaaccacccctcctcaatgaat 180  Q
    |||||||| |||| ||||| ||||||||||| |||||||| |||||| | |||| ||| |||||||||||| ||||||||| ||||||||||| |||| |    
T  2979471 tgtgaaaatcacttatttagattgaaagaaagaggaaaaaagatgcagaggggtgattataggtcaaaaattgacctaaaatcacccctcctcgatgagt 2979570  T
Q  181 gaaggagaaagaaaactta 199  Q
    ||| ||| |||||||||||    
T  2979571 gaaagaggaagaaaactta 2979589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 7036158 - 7036044
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaat-aggaaaaa-gatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaa 179  Q
    ||||||||||||| ||||| |||||||||||  |||||||| |||| | ||| || ||||||||||||||| ||||||||||||||||| |||  |||||    
T  7036158 tgtgaaaaccacttatttagattgaaagaaaagaggaaaaaagatgtagatgagtgattttaggtcaaaaaatgacctaaaaccaccccaccttgatgaa 7036059  T
Q  180 tgaaggagaaagaaa 194  Q
    |||||||||||||||    
T  7036058 tgaaggagaaagaaa 7036044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 38597727 - 38597614
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg--aaaaagatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaa 179  Q
    |||||||| |||| |||||||||||||||| ||||  ||||||||| | | |||| ||| ||||||||||| | |||||||||||||||||||| |||||    
T  38597727 tgtgaaaatcacttatttaaattgaaagaa-tagggaaaaaagatgtagaggggtgattctaggtcaaaaaataacctaaaaccacccctcctcgatgaa 38597629  T
Q  180 tgaaggagaaagaaa 194  Q
     ||||||||||||||    
T  38597628 cgaaggagaaagaaa 38597614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 194
Target Start/End: Original strand, 6012297 - 6012410
Alignment:
Q  84 gtgaaaaccactcatttaaattgaaagaaataggaaaaa--gatgcatatgggtcattttaggtcaaaa-atgacctaaaaccacccctcctcaatgaat 180  Q
    ||||||| |||| ||||| |||||||||||  |||||||  |||| | | |||| ||| || ||||||| |||||||||||||||||||||||||||||     
T  6012297 gtgaaaaacacttatttagattgaaagaaaagggaaaaaaagatgtagaggggtgattctatgtcaaaaaatgacctaaaaccacccctcctcaatgaac 6012396  T
Q  181 gaaggagaaagaaa 194  Q
    ||||||||||||||    
T  6012397 gaaggagaaagaaa 6012410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 83 - 194
Target Start/End: Original strand, 26878237 - 26878350
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg--aaaaagatgcatatgggtcattttaggtcaaaaatgacctaaaaccacccctcctcaatgaat 180  Q
    ||||||||||||| ||||| |||||||||||  ||  ||||||||| | |  ||| ||| ||| ||||||||||| |||||||||| |||||| ||||||    
T  26878237 tgtgaaaaccacttatttagattgaaagaaaagggggaaaaagatgtagagaggtgattctagatcaaaaatgacataaaaccacctctcctcgatgaat 26878336  T
Q  181 gaaggagaaagaaa 194  Q
    ||||||||||||||    
T  26878337 gaaggagaaagaaa 26878350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 13007159 - 13007045
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg--aaaaagatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaa 179  Q
    ||||||||||||| ||||| |||||||||||  ||  |||||| || | | |||| ||| ||||||||||| ||||||||||||||| |||||| |||||    
T  13007159 tgtgaaaaccacttatttagattgaaagaaaatgggaaaaaaggtgtagaggggtgattctaggtcaaaaaatgacctaaaaccacctctcctcgatgaa 13007060  T
Q  180 tgaaggagaaagaaa 194  Q
     ||||||||||||||    
T  13007059 cgaaggagaaagaaa 13007045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 83 - 199
Target Start/End: Complemental strand, 39567225 - 39567107
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg-aaaaagatgcatatgggtcattttaggtcaaaaat-gacctaaaaccacccctcctcaatgaat 180  Q
    |||||||| |||| ||||| |||||||||||  || ||||||||||| | | || ||| |||||||||||| ||||||||| ||||||||||| |||| |    
T  39567225 tgtgaaaatcacttatttagattgaaagaaagggggaaaaagatgcagaggcgtgattctaggtcaaaaattgacctaaaatcacccctcctcgatgagt 39567126  T
Q  181 gaaggagaaagaaaactta 199  Q
    ||| ||| |||||||||||    
T  39567125 gaaagaggaagaaaactta 39567107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 199
Target Start/End: Complemental strand, 14211160 - 14211045
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaaaagatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaatg 181  Q
    |||||||| |||| ||||| |||||||||||  ||||||||||||| | |||| ||| ||||||||||| |||||||||| || |||||||| |||| ||    
T  14211160 tgtgaaaatcacttatttagattgaaagaaag-ggaaaaagatgcagaggggtgattctaggtcaaaaattgacctaaaatca-ccctcctcgatgagtg 14211063  T
Q  182 aaggagaaagaaaactta 199  Q
    || ||| |||||||||||    
T  14211062 aaagaggaagaaaactta 14211045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 216
Target Start/End: Complemental strand, 26825360 - 26825223
Alignment:
Q  84 gtgaaaaccactcatttaaattgaaagaaatagg--aaaaagatgcatatgggtcattttaggtc---aaaaatgacctaaaaccacccctcctcaatga 178  Q
    |||||||||||| ||||| |||||||||||  ||  ||||||||| | |  ||| ||| ||||||   ||||| ||||||||||||||||||||| ||||    
T  26825360 gtgaaaaccacttatttagattgaaagaaaaggggaaaaaagatgtagagtggtgattctaggtccaaaaaaaagacctaaaaccacccctcctcgatga 26825261  T
Q  179 atgaaggagaaagaaaacttataaagaaagtggagttt 216  Q
    | ||||||||||||||  ||| | ||||| ||||||||    
T  26825260 aagaaggagaaagaaagtttagagagaaattggagttt 26825223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 15571416 - 15571302
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaat-aggaaaaagatgcatatgggtcattttaggtcaaaaa--tgacctaaaaccacccctcctcaatgaa 179  Q
    ||||||||||||| ||||| |||||||||||| || |||||||||   |||| | ||| |||||||||||  |||| ||||||||   |||||| |||||    
T  15571416 tgtgaaaaccacttatttagattgaaagaaatgagaaaaaagatgttgatggatgattctaggtcaaaaaaatgacataaaaccatttctcctcgatgaa 15571317  T
Q  180 tgaaggagaaagaaa 194  Q
    |||||||||||||||    
T  15571316 tgaaggagaaagaaa 15571302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 34945352 - 34945238
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg--aaaaagatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaa 179  Q
    ||||||||||||| ||||| |||||||||||  ||  ||||||||| | | |||| ||| ||||||||||| ||||||||||||| || || || |||||    
T  34945352 tgtgaaaaccacttatttagattgaaagaaaaggggaaaaaagatgtagaagggtgattctaggtcaaaaaatgacctaaaaccatccttcttcgatgaa 34945253  T
Q  180 tgaaggagaaagaaa 194  Q
     ||||||||||||||    
T  34945252 cgaaggagaaagaaa 34945238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 117 - 194
Target Start/End: Original strand, 31391951 - 31392029
Alignment:
Q  117 gaaaaagatgcatatgggtcattttaggtcaaaa-atgacctaaaaccacccctcctcaatgaatgaaggagaaagaaa 194  Q
    |||||||||| | | |||| ||| |||||||||| ||||||||||||||||||||||| ||||| || |||||||||||    
T  31391951 gaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgatggagaaagaaa 31392029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 83 - 190
Target Start/End: Original strand, 8096656 - 8096764
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaaaa-gatgcatatgggtcattttaggtcaaaaatgacctaaaaccacccctcctcaatgaatg 181  Q
    ||||||||||||| ||||| |||||||||||  ||||||| ||   | | |||| ||| ||||||||||||||||||||||||  |||||||||| || |    
T  8096656 tgtgaaaaccacttatttagattgaaagaaaagggaaaaaagaaatagaggggtgattctaggtcaaaaatgacctaaaaccaatcctcctcaataaacg 8096755  T
Q  182 aaggagaaa 190  Q
    ||| |||||    
T  8096756 aagaagaaa 8096764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 194
Target Start/End: Original strand, 9113883 - 9113997
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg--aaaaagatgcatatgggtcattttaggtcaaaa-atgacctaaaaccacccctcctcaatgaa 179  Q
    ||||||||||||| ||||| ||| |||||||  ||  ||||||||| | | |||| ||| ||||| |||| ||||||||||| ||||||||||| |||||    
T  9113883 tgtgaaaaccacttatttagattaaaagaaaatgggaaaaaagatgtagaggggtgattctaggttaaaaaatgacctaaaatcacccctcctcgatgaa 9113982  T
Q  180 tgaaggagaaagaaa 194  Q
     ||| ||||||||||    
T  9113983 cgaaagagaaagaaa 9113997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 166
Target Start/End: Complemental strand, 41630432 - 41630350
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaaaagatgcatatgggtcattttaggtcaaaaatgacctaaaaccacc 166  Q
    |||||||||  || ||||| |||||||||||| ||||||||||| | | | || ||| ||||||||||||||||||||||||||    
T  41630432 tgtgaaaacggcttatttagattgaaagaaatgggaaaaagatgtaga-gagtgattctaggtcaaaaatgacctaaaaccacc 41630350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 190
Target Start/End: Complemental strand, 35850697 - 35850605
Alignment:
Q  100 taaattgaaagaaataggaaaaagat--gcatatgggtcattttaggtcaaaaatgacctaaaaccacccctcctcaatgaatgaaggagaaa 190  Q
    ||||||||||||||  ||||||| ||  | | |||||| ||| ||||||||||| ||||||||||||||||||||| || || ||| ||||||    
T  35850697 taaattgaaagaaaagggaaaaaaatatgtagatgggtgattctaggtcaaaaaagacctaaaaccacccctcctcgataaacgaatgagaaa 35850605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 194
Target Start/End: Complemental strand, 25980021 - 25979974
Alignment:
Q  147 aaaaatgacctaaaaccacccctcctcaatgaatgaaggagaaagaaa 194  Q
    ||||||||||| ||||||||| ||||| ||||| ||||||||||||||    
T  25980021 aaaaatgacctgaaaccacccatcctcgatgaacgaaggagaaagaaa 25979974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 6216769 - 6216715
Alignment:
Q  137 attttaggtcaaa-aatgacctaaaaccacccctcctcaatgaatgaaggagaaa 190  Q
    ||||||||||||| |||||||||||||||||| ||||| ||||| ||| ||||||    
T  6216769 attttaggtcaaagaatgacctaaaaccacccatcctcgatgaacgaatgagaaa 6216715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 8088371 - 8088477
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaaaagatgcatatgggtcattttaggtcaaa-aatgacctaaaaccacccctcctcaatgaatg 181  Q
    |||||||| |||| ||||| || |||||||| || ||||||||||| |  ||| | || |||||||| ||||| |||||| ||||||| |||||||| ||    
T  8088371 tgtgaaaatcacttatttagatcgaaagaaagagaaaaaagatgcagagaggtgacttcaggtcaaagaatgatctaaaatcaccccttctcaatgagtg 8088470  T
Q  182 aaggaga 188  Q
    || ||||    
T  8088471 aaagaga 8088477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 11074118 - 11074172
Alignment:
Q  141 taggtcaaaaatgacctaaaaccaccc-ctcctcaatgaatgaaggagaaagaaa 194  Q
    |||||||||||| |||||||||||||| |||||| ||||| || |||||||||||    
T  11074118 taggtcaaaaataacctaaaaccaccctctcctcgatgaacgagggagaaagaaa 11074172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 21431555 - 21431442
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg--aaaaagatgcatatgggtcattttaggtcaaaaatgacctaaaaccacccctcctcaatgaat 180  Q
    ||||||||||||| ||||| |||||||||||  ||  ||||||||| | | |||| ||||||||||||||||||||||||||||||||||||| |||||     
T  21431555 tgtgaaaaccacttatttagattgaaagaaaatgggaaaaaagatgtagaggggtgattttaggtcaaaaatgacctaaaaccacccctcctcgatgaac 21431456  T
Q  181 gaaggagaaagaaa 194  Q
    ||||||||||||||    
T  21431455 gaaggagaaagaaa 21431442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 83 - 194
Target Start/End: Original strand, 52923275 - 52923387
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaaaa-gatgcatatgggtcattttaggtcaaaaatgacctaaaaccacccctcctcaatgaatg 181  Q
    ||||||||||||| ||||| |||||||||||  ||||||| |||| | | |||| ||| ||||||||||||||| |||||| ||| |||||||||||| |    
T  52923275 tgtgaaaaccacttatttagattgaaagaaaagggaaaaaagatgtagaggggtgattctaggtcaaaaatgacttaaaactacctctcctcaatgaacg 52923374  T
Q  182 aaggagaaagaaa 194  Q
    |||||||||||||    
T  52923375 aaggagaaagaaa 52923387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 84 - 194
Target Start/End: Complemental strand, 9998397 - 9998283
Alignment:
Q  84 gtgaaaaccactcatttaaattgaaagaaatagg--aaaaagatgcatatgggtcattttaggtcaaaaa--tgacctaaaaccacccctcctcaatgaa 179  Q
    |||||||||||| ||||| |||||||||||  ||  ||||||||| | | |||| ||| |||||||||||  |||||||||||||||||||||| |||||    
T  9998397 gtgaaaaccacttatttagattgaaagaaaaggggaaaaaagatgtagaggggtgattctaggtcaaaaaaatgacctaaaaccacccctcctcgatgaa 9998298  T
Q  180 tgaaggagaaagaaa 194  Q
     ||||||||||||||    
T  9998297 cgaaggagaaagaaa 9998283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 194
Target Start/End: Complemental strand, 10233000 - 10232887
Alignment:
Q  84 gtgaaaaccactcatttaaattgaaagaaatagg--aaaaagatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaat 180  Q
    |||||||||||| ||||| |||||||||||  ||  ||||||||| | | |||| ||| ||||||||||| |||||||||||||||||||||  |||||     
T  10233000 gtgaaaaccacttatttagattgaaagaaaaggggaaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctccttgatgaac 10232901  T
Q  181 gaaggagaaagaaa 194  Q
    ||||||||||||||    
T  10232900 gaaggagaaagaaa 10232887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 147 - 216
Target Start/End: Original strand, 953632 - 953701
Alignment:
Q  147 aaaaatgacctaaaaccacccctcctcaatgaatgaaggagaaagaaaacttataaagaaagtggagttt 216  Q
    ||||| |||||||||||||  |||||||||||||||||||||||||||||||| | |||| |||||||||    
T  953632 aaaaaagacctaaaaccacttctcctcaatgaatgaaggagaaagaaaacttagagagaatgtggagttt 953701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 84 - 194
Target Start/End: Complemental strand, 10108166 - 10108055
Alignment:
Q  84 gtgaaaaccactcatttaaattgaaagaaatagg--aaaaagatgcatatgggtcattttaggtcaaaaatgacctaaaaccacccctcctcaatgaatg 181  Q
    |||||||||||| ||||| |||||||||||  ||  ||||||||| | | |||| ||| |||||||||| |||||||||||||||||||||| |||||      
T  10108166 gtgaaaaccacttatttagattgaaagaaaaggggaaaaaagatgtagaggggtgattctaggtcaaaa-tgacctaaaaccacccctcctcgatgaaca 10108068  T
Q  182 aaggagaaagaaa 194  Q
    |||||||||||||    
T  10108067 aaggagaaagaaa 10108055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 194
Target Start/End: Original strand, 26275952 - 26276065
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaa-taggaaaaagatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaat 180  Q
    ||||||||||||| ||||||||||||||||| | || |||| |||   | || | ||||||||||||||| | ||||||||||||| |||||||||||||    
T  26275952 tgtgaaaaccacttatttaaattgaaagaaaatgggtaaaaaatgtcgagggttgattttaggtcaaaaaattacctaaaaccacctctcctcaatgaat 26276051  T
Q  181 gaaggagaaagaaa 194  Q
     |||||||||||||    
T  26276052 aaaggagaaagaaa 26276065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 194
Target Start/End: Original strand, 35865092 - 35865205
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaat-aggaaaaa-gatgcatatgggtcattttaggtcaaaaatgacctaaaaccacccctcctcaatgaat 180  Q
    ||||||||| ||| ||||| |||||||||||  |||||||| |||| | | || | ||||||| ||||||||||||||||||||||||||||| | |||     
T  35865092 tgtgaaaactacttatttagattgaaagaaaagaggaaaaaagatgtagaaggatgattttagatcaaaaatgacctaaaaccacccctcctcgaggaac 35865191  T
Q  181 gaaggagaaagaaa 194  Q
    ||||||||||||||    
T  35865192 gaaggagaaagaaa 35865205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 84 - 194
Target Start/End: Complemental strand, 40487254 - 40487142
Alignment:
Q  84 gtgaaaaccactcatttaaattgaaagaaatagg-aaaaagatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaatg 181  Q
    |||||||||||| ||||| |||||||||||  || ||||||||| | | | || ||| ||||||||||| |||||||||| ||||||||||| ||||| |    
T  40487254 gtgaaaaccacttatttagattgaaagaaaaggggaaaaagatgtagaagagtgattctaggtcaaaaaatgacctaaaatcacccctcctcgatgaacg 40487155  T
Q  182 aaggagaaagaaa 194  Q
    |||||||||||||    
T  40487154 aaggagaaagaaa 40487142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 83 - 166
Target Start/End: Complemental strand, 53508151 - 53508067
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaaaa-gatgcatatgggtcattttaggtcaaaaatgacctaaaaccacc 166  Q
    |||||||| |||| ||||| ||||||||||| |||||||| || ||| |||||| ||||||||||||||||||||||| ||||||    
T  53508151 tgtgaaaatcacttatttatattgaaagaaaaaggaaaaaagacgcagatgggtgattttaggtcaaaaatgacctaagaccacc 53508067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 83 - 194
Target Start/End: Original strand, 6954854 - 6954968
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg--aaaaagatgcatatgggtcattttaggtcaaaa-atgacctaaaaccacccctcctcaatgaa 179  Q
    ||||||| ||||| ||||| |||||||||||  ||  ||||||||| | | |||| ||| |||||||||| ||||||||||| |||||||||||| ||||    
T  6954854 tgtgaaacccacttatttagattgaaagaaaaggggaaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaatcacccctcctcagtgaa 6954953  T
Q  180 tgaaggagaaagaaa 194  Q
     ||||||||||||||    
T  6954954 cgaaggagaaagaaa 6954968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 83 - 194
Target Start/End: Original strand, 45568602 - 45568716
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg--aaaaagatgcatatgggtcattttaggtcaaaa-atgacctaaaaccacccctcctcaatgaa 179  Q
    ||||||||| ||| ||||| |||||||||||  ||  ||||||||| | |||| | ||| ||| |||||| ||||||||||||||||||||||| |||||    
T  45568602 tgtgaaaacaacttatttagattgaaagaaaaggggaaaaaagatgtagatggattattctagatcaaaaaatgacctaaaaccacccctcctcgatgaa 45568701  T
Q  180 tgaaggagaaagaaa 194  Q
     ||||||||||||||    
T  45568702 cgaaggagaaagaaa 45568716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 47896082 - 47895968
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg--aaaaagatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaa 179  Q
    ||||||||||||| ||||| ||||||||||| ||   ||||||||| | | |||| ||| ||||||||||| ||| ||| |||||||||||||| |||||    
T  47896082 tgtgaaaaccacttatttagattgaaagaaaaagagaaaaaagatgtagaggggtgattctaggtcaaaaaatgatctataaccacccctcctcgatgaa 47895983  T
Q  180 tgaaggagaaagaaa 194  Q
     ||||||||||||||    
T  47895982 cgaaggagaaagaaa 47895968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 54148919 - 54148805
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaat-aggaaaaa-gatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaa 179  Q
    ||||||||||||| ||||| |||||||||||  |||||||| |||| | | |||| ||| ||||||||||| |||||||||||||||||||||| ||  |    
T  54148919 tgtgaaaaccacttatttagattgaaagaaaagaggaaaaaagatgtagaggggtgattgtaggtcaaaaaatgacctaaaaccacccctcctcgattga 54148820  T
Q  180 tgaaggagaaagaaa 194  Q
     ||||||||||||||    
T  54148819 cgaaggagaaagaaa 54148805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 216
Target Start/End: Complemental strand, 10229406 - 10229269
Alignment:
Q  84 gtgaaaaccactcatttaaattgaaagaaatagg--aaaaagatgcatatgggtcattttaggtc---aaaaatgacctaaaaccacccctcctcaatga 178  Q
    |||||||||||| ||||| |||||||||||  ||  ||||||||| | |  ||| ||| ||||||   ||||| ||||||||||||||||||||| ||||    
T  10229406 gtgaaaaccacttatttagattgaaagaaaaggggaaaaaagatgtagagtggtgattctaggtccaaaaaaaagacctaaaaccacccctcctcgatga 10229307  T
Q  179 atgaaggagaaagaaaacttataaagaaagtggagttt 216  Q
    | ||||||||||||||  ||| | ||||| ||||||||    
T  10229306 aagaaggagaaagaaagtttagagagaaattggagttt 10229269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 87 - 194
Target Start/End: Original strand, 20465132 - 20465239
Alignment:
Q  87 aaaaccactcatttaaattgaaagaaataggaaaaagatgcatatgggtcattttaggtcaaaaatgacctaaaaccacccctcctcaatgaatgaagga 186  Q
    |||| |||| ||||| ||||||| |||  ||||||||| | | | |||| ||| || |||||||||||| ||||||||||||| ||  ||||||||||||    
T  20465132 aaaatcacttatttatattgaaaaaaaggggaaaaagagggagaggggtgattctatgtcaaaaatgacataaaaccacccctacttgatgaatgaagga 20465231  T
Q  187 gaaagaaa 194  Q
    ||||||||    
T  20465232 gaaagaaa 20465239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 118 - 216
Target Start/End: Complemental strand, 38142465 - 38142366
Alignment:
Q  118 aaaaagatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaatgaaggagaaagaaaacttataaagaaagtggagttt 216  Q
    ||||||||||| ||| || ||||||||||||||| ||| |||||| ||| | | ||  ||||||||| ||||||||||||||| |||||| |||||||||    
T  38142465 aaaaagatgcagatgagtgattttaggtcaaaaaatgaactaaaatcactcattcttgatgaatgaaagagaaagaaaacttaaaaagaatgtggagttt 38142366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 147 - 194
Target Start/End: Complemental strand, 38545699 - 38545652
Alignment:
Q  147 aaaaatgacctaaaaccacccctcctcaatgaatgaaggagaaagaaa 194  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||    
T  38545699 aaaaatgacctaaaaccaccactcctcaatgaacgaaggagaaagaaa 38545652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 83 - 186
Target Start/End: Original strand, 47042210 - 47042316
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaaaa--gatgcatatgggtcattttaggtcaaaa-atgacctaaaaccacccctcctcaatgaa 179  Q
    |||||||| |||| |||||||||||||||||  |||||||  |||| | | |||| ||| ||||| |||| ||||||||||||||||||||||| |||||    
T  47042210 tgtgaaaatcacttatttaaattgaaagaaaagggaaaaaaagatgtagaggggtgattataggttaaaaaatgacctaaaaccacccctcctcgatgaa 47042309  T
Q  180 tgaagga 186  Q
     ||||||    
T  47042310 cgaagga 47042316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 132 - 194
Target Start/End: Original strand, 48650944 - 48651007
Alignment:
Q  132 gggtcattttaggtcaaaa-atgacctaaaaccacccctcctcaatgaatgaaggagaaagaaa 194  Q
    |||| |||||||||||||| ||||||||||||||||||||||| ||||| || |||||||||||    
T  48650944 gggtgattttaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgatggagaaagaaa 48651007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 118 - 199
Target Start/End: Original strand, 629101 - 629183
Alignment:
Q  118 aaaaagatgcatatgggtcattttaggtcaaa-aatgacctaaaaccacccctcctcaatgaatgaaggagaaagaaaactta 199  Q
    ||||||||||| | || | ||||||||||||| |||||||||||||||||||||||| |||| |||| | ||| |||||||||    
T  629101 aaaaagatgcagaaggatgattttaggtcaaagaatgacctaaaaccacccctcctcgatgagtgaaagggaaggaaaactta 629183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 199
Target Start/End: Complemental strand, 16235344 - 16235231
Alignment:
Q  87 aaaaccactcatttaaattgaaagaaataggaaaaagatgcatatgggtcattttaggtcaaaaat-gacctaaaaccacccctcctcaatgaatgaagg 185  Q
    |||| |||| ||||| ||||||| |||  | ||||||||||| ||| || ||| |||||||||||| ||||||||| ||| | |||||||||| |||| |    
T  16235344 aaaatcacttatttagattgaaaaaaaaggaaaaaagatgcagatgagtgattctaggtcaaaaattgacctaaaatcactcatcctcaatgagtgaaag 16235245  T
Q  186 agaaagaaaactta 199  Q
    || |||||||||||    
T  16235244 aggaagaaaactta 16235231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 40556575 - 40556506
Alignment:
Q  147 aaaaatgacctaaaaccacccctcctcaatgaatgaaggagaaagaaaacttataaagaaagtggagttt 216  Q
    ||||||||||||||||||||||||||| ||||| ||| ||||||||||  ||| ||||||  ||||||||    
T  40556575 aaaaatgacctaaaaccacccctcctcgatgaacgaatgagaaagaaagtttagaaagaagttggagttt 40556506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 173
Target Start/End: Original strand, 43488748 - 43488840
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg--aaaaagatgcatatgggtcattttaggtcaaaaatgacctaaaaccacccctcctc 173  Q
    ||||||||||||| ||||| ||||||||||| |||  ||||||||| | | |||| ||| ||||||||||| |||||||| ||||||| ||||    
T  43488748 tgtgaaaaccacttatttagattgaaagaaaaagggaaaaaagatgtagaggggtgattctaggtcaaaaaagacctaaacccaccccccctc 43488840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 194
Target Start/End: Original strand, 21533967 - 21534080
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaat-aggaaaaa--gatgcatatgggtcattttaggtcaaaaatgacctaaaaccacccctcctcaatgaa 179  Q
    ||||||||||||| ||||| |||| ||||||  ||||||||  |||| | | |||| ||| ||||||||||| ||||||||||||||| ||||| || ||    
T  21533967 tgtgaaaaccacttatttagattggaagaaaagaggaaaaaaagatgtagaggggtgattctaggtcaaaaa-gacctaaaaccacccatcctcgattaa 21534065  T
Q  180 tgaaggagaaagaaa 194  Q
     ||||||||||||||    
T  21534066 cgaaggagaaagaaa 21534080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 194
Target Start/End: Complemental strand, 32701362 - 32701315
Alignment:
Q  147 aaaaatgacctaaaaccacccctcctcaatgaatgaaggagaaagaaa 194  Q
    |||||||||||||||||||||| |||| ||||| ||||||||||||||    
T  32701362 aaaaatgacctaaaaccaccccacctcgatgaacgaaggagaaagaaa 32701315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 194
Target Start/End: Original strand, 36461589 - 36461703
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg--aaaaagatgcatatgggtcattttaggtcaaaa-atgacctaaaaccacccctcctcaatgaa 179  Q
    |||||||| |||| ||||| |||||||||||  ||  ||||||||| | | |||| | | |||||||||| ||||||||||||||| | ||||| |||||    
T  36461589 tgtgaaaatcacttatttagattgaaagaaaaggggaaaaaagatgtagaggggtgaatataggtcaaaaaatgacctaaaaccactcatcctcgatgaa 36461688  T
Q  180 tgaaggagaaagaaa 194  Q
     ||||||||||||||    
T  36461689 cgaaggagaaagaaa 36461703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 199
Target Start/End: Complemental strand, 7546504 - 7546422
Alignment:
Q  118 aaaaagatgcatatgggtcattttaggtcaaaaat-gacctaaaaccacccctcctcaatgaatgaaggagaaagaaaactta 199  Q
    ||||||||||| | |||| ||| ||| |||||||| ||||||||| ||||||||||| |||| |||  |||||||||||||||    
T  7546504 aaaaagatgcagaggggtgattctagatcaaaaattgacctaaaatcacccctcctcgatgagtgagagagaaagaaaactta 7546422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 199
Target Start/End: Complemental strand, 8914598 - 8914516
Alignment:
Q  118 aaaaagatgcatatgggtcattttaggtcaaaaat-gacctaaaaccacccctcctcaatgaatgaaggagaaagaaaactta 199  Q
    ||||||||||| | |||| ||| |||||||||||| ||||||||| ||||||| ||| |||| |||| ||| |||||||||||    
T  8914598 aaaaagatgcagaggggttattctaggtcaaaaattgacctaaaatcaccccttctcgatgagtgaaagaggaagaaaactta 8914516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 199
Target Start/End: Original strand, 21290014 - 21290096
Alignment:
Q  118 aaaaagatgcatatgggtcattttaggtcaaaaat-gacctaaaaccacccctcctcaatgaatgaaggagaaagaaaactta 199  Q
    ||||||||||| | |||| ||| |||||||||||| ||||||||| |||| |||||| |||| |||| ||| |||||||||||    
T  21290014 aaaaagatgcagaggggtgattctaggtcaaaaattgacctaaaatcacctctcctccatgagtgaaagaggaagaaaactta 21290096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 199
Target Start/End: Complemental strand, 29921917 - 29921864
Alignment:
Q  147 aaaaatgacctaaaa-ccacccctcctcaatgaatgaaggagaaagaaaactta 199  Q
    ||||||||||||||| |||||||||||| | ||||||| |||||||||||||||    
T  29921917 aaaaatgacctaaaaaccacccctcctcgacgaatgaaagagaaagaaaactta 29921864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 199
Target Start/End: Complemental strand, 29971070 - 29971017
Alignment:
Q  147 aaaaatgacctaaaa-ccacccctcctcaatgaatgaaggagaaagaaaactta 199  Q
    ||||||||||||||| |||||||||||| | ||||||| |||||||||||||||    
T  29971070 aaaaatgacctaaaaaccacccctcctcgacgaatgaaagagaaagaaaactta 29971017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 33579798 - 33579685
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaaaa-gatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaat 180  Q
    |||||||| |||| ||||| |||||||||||  ||||||| |||| | | |||| ||| ||||||||||| |||| ||||||||||| || || |||||     
T  33579798 tgtgaaaatcacttatttagattgaaagaaaatggaaaaaagatgtagaggggtgattctaggtcaaaaaatgacttaaaaccacccttcttcgatgaac 33579699  T
Q  181 gaaggagaaagaaa 194  Q
    |||||| |||||||    
T  33579698 gaaggataaagaaa 33579685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 46220608 - 46220495
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaaaa-gatgcatatgggtcattttaggtcaaaaatgacctaaaaccacccc-tcctcaatgaat 180  Q
    |||||||||| || ||||| ||| ||| ||| |||||||| |||| | | | || |||||| || |||||||||||||||||||||| |||||||| |||    
T  46220608 tgtgaaaaccgcttatttatatttaaaaaaagaggaaaaaagatgtaaaggagtaattttatgttaaaaatgacctaaaaccaccccttcctcaataaat 46220509  T
Q  181 gaaggagaaagaaa 194  Q
     || ||||||||||    
T  46220508 aaaagagaaagaaa 46220495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 4821671 - 4821623
Alignment:
Q  147 aaaaatgacctaaaaccacccctcctcaatgaatgaaggagaaagaaaa 195  Q
    ||||||||||||||||||||||| ||| | ||||||| |||||||||||    
T  4821671 aaaaatgacctaaaaccaccccttctcgacgaatgaaagagaaagaaaa 4821623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 199
Target Start/End: Original strand, 20609111 - 20609174
Alignment:
Q  137 attttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaatgaaggagaaagaaaactta 199  Q
    ||||||||||||||| | || ||||| ||||||||||| | |||||||||||||||||| ||||    
T  20609111 attttaggtcaaaaaataacttaaaatcacccctcctcgacgaatgaaggagaaagaaagctta 20609174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 195
Target Start/End: Original strand, 23800071 - 23800184
Alignment:
Q  87 aaaaccactcatttaaattgaaag-aaatagg-aaaaagatgcatatgggtcattttaggtc-aaaaatgacctaaaacca--cccctcctcaatgaatg 181  Q
    ||||||||| ||||| |||||||| ||| ||| ||||||||| | | | || |||||||||| |||||| |||||||||||  |||||| || |||||||    
T  23800071 aaaaccacttatttagattgaaagaaaagaggaaaaaagatgtagaagagtaattttaggtcaaaaaataacctaaaaccacccccctcttcgatgaatg 23800170  T
Q  182 aaggagaaagaaaa 195  Q
    ||||||||| ||||    
T  23800171 aaggagaaaaaaaa 23800184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 214
Target Start/End: Original strand, 42456300 - 42456358
Alignment:
Q  156 ctaaaaccacccctcctcaatgaatgaaggagaaagaaaacttataaagaaagtggagt 214  Q
    ||||||||| |||||||| ||||||||| ||||||||||| ||| ||| ||| ||||||    
T  42456300 ctaaaaccatccctcctcgatgaatgaatgagaaagaaaatttagaaaaaaattggagt 42456358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 199
Target Start/End: Complemental strand, 14859361 - 14859309
Alignment:
Q  147 aaaaatgacctaaaaccacccctcctcaatgaatgaaggagaaagaaaactta 199  Q
    ||||||||||||||| |||||||||||||| | ||||  |||| |||||||||    
T  14859361 aaaaatgacctaaaatcacccctcctcaataagtgaaaaagaatgaaaactta 14859309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 216
Target Start/End: Complemental strand, 22290868 - 22290733
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg--aaaaagatgcatatgggtcattttaggtcaaaaatgacctaaaaccacccctcctcaatgaat 180  Q
    |||||||| |||| ||||| ||| ||||||| |||  ||||||||||| |  | | ||| ||| ||||||||||  ||||| ||  ||||| | |||| |    
T  22290868 tgtgaaaatcacttatttagattaaaagaaagagggaaaaaagatgcaaagagatgattctagatcaaaaatgaattaaaatcatacctccactatgagt 22290769  T
Q  181 gaaggagaaagaaaacttataaagaaagtggagttt 216  Q
    ||| ||||||||||||||| ||||||| || |||||    
T  22290768 gaaagagaaagaaaacttaaaaagaaattgaagttt 22290733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 2e-27; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 79 - 216
Target Start/End: Complemental strand, 18939258 - 18939120
Alignment:
Q  79 tatgtgtgaaaaccactcatttaaattgaaagaaataggaaaaagatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatg 177  Q
    ||||||||||||| ||| |||||||||||||||||  ||||||||||||| |  ||| ||| ||| ||||||| ||||||||||||||| |||||| ||     
T  18939258 tatgtgtgaaaactacttatttaaattgaaagaaaggggaaaaagatgcagagaggtgattctagatcaaaaaatgacctaaaaccacctctcctcgatt 18939159  T
Q  178 aatgaaggagaaagaaaacttataaagaaagtggagttt 216  Q
    |||||||||||||||||||||| | |||| ||| |||||    
T  18939158 aatgaaggagaaagaaaacttagagagaaggtgaagttt 18939120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 79 - 194
Target Start/End: Original strand, 34878426 - 34878543
Alignment:
Q  79 tatgtgtgaaaaccactcatttaaattgaaagaaataggaaaaa-gatgcatatgggtcattttaggtcaaaa-atgacctaaaaccacccctcctcaat 176  Q
    ||||||||||||||||| |||||||||||||||||  ||||||| |||| | ||| || ||| |||||||||| ||||||||||||||||||||||| ||    
T  34878426 tatgtgtgaaaaccacttatttaaattgaaagaaaatggaaaaaagatgtagatgagtgattctaggtcaaaaaatgacctaaaaccacccctcctcgat 34878525  T
Q  177 gaatgaaggagaaagaaa 194  Q
    ||| ||| ||||||||||    
T  34878526 gaacgaaagagaaagaaa 34878543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 216
Target Start/End: Complemental strand, 45789497 - 45789363
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaaaagatgcatatgggtcattttaggtca-aaaatgacctaaaaccacccctcctcaatgaatg 181  Q
    ||||||||||||| |||||||||||||||||  ||||||||||||| | |||| ||| ||||||| ||||||||||||||||| |  ||||| |||||||    
T  45789497 tgtgaaaaccacttatttaaattgaaagaaaggggaaaaagatgcagaggggtgattctaggtcaaaaaatgacctaaaaccatcaatcctcgatgaatg 45789398  T
Q  182 aaggagaaagaaaacttataaagaaagtggagttt 216  Q
    ||| ||||| |||| ||| | |||| || ||||||    
T  45789397 aagtagaaataaaatttagagagaacgtagagttt 45789363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 32394932 - 32394819
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg-aaaaagatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaat 180  Q
    ||||||||||||||||||| |||||||||||  || ||||||||||| | || | ||| || |||||||| |||||||||||||||||||||| |||||     
T  32394932 tgtgaaaaccactcatttagattgaaagaaaaggggaaaaagatgcagagggatgattctaagtcaaaaaatgacctaaaaccacccctcctcgatgaac 32394833  T
Q  181 gaaggagaaagaaa 194  Q
    ||||||||||||||    
T  32394832 gaaggagaaagaaa 32394819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 83 - 199
Target Start/End: Complemental strand, 15492224 - 15492109
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaaaagatgcatatgggtcattttaggtcaaaaatgacctaaaaccacccctcctcaatgaatga 182  Q
    |||||||| || | ||||| |||||||||||| ||||||||||||| |  | | ||||||||||||||| |||||||||||||| ||||||||||| | |    
T  15492224 tgtgaaaatcatttatttagattgaaagaaat-ggaaaaagatgcaaaatgatgattttaggtcaaaaaagacctaaaaccacctctcctcaatgagtaa 15492126  T
Q  183 aggagaaagaaaactta 199  Q
    | |||||||||||||||    
T  15492125 aagagaaagaaaactta 15492109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 83 - 194
Target Start/End: Original strand, 29738794 - 29738908
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg--aaaaagatgcatatgggtcattttaggtcaaaaat-gacctaaaaccacccctcctcaatgaa 179  Q
    ||||||||||||| ||||| ||||||||||| |||  ||||||||| | | |||| ||| ||||| |||||| ||||||||||||||||||||| |||||    
T  29738794 tgtgaaaaccacttatttagattgaaagaaaaaggggaaaaagatgtagaggggtgattctaggtaaaaaattgacctaaaaccacccctcctcgatgaa 29738893  T
Q  180 tgaaggagaaagaaa 194  Q
     ||||||||||||||    
T  29738894 cgaaggagaaagaaa 29738908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 78 - 216
Target Start/End: Original strand, 10776611 - 10776754
Alignment:
Q  78 ttatgtgtgaaaaccactcatttaaattgaaagaaa-taggaaaaa---gatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcct 172  Q
    |||| ||| ||||||||| ||||| ||||||||||| |||||||||   |||| | |||||| ||| ||||||||||| ||| |||||||||||| ||||    
T  10776611 ttatatgtaaaaaccacttatttagattgaaagaaaataggaaaaaaaagatgtagatgggtgattctaggtcaaaaaatgatctaaaaccacccttcct 10776710  T
Q  173 caatgaatgaaggagaaagaaaacttataaagaaagtggagttt 216  Q
    | ||||||||||||||||||||  ||| | ||||| ||||||||    
T  10776711 cgatgaatgaaggagaaagaaagtttagagagaaattggagttt 10776754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 216
Target Start/End: Complemental strand, 49626843 - 49626708
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaaaa-gatgcatatgggtcattttaggtcaaa-aatgacctaaaaccacccctcctcaatgaat 180  Q
    |||||||| |||| ||||| || ||||||||  ||||||| |||||| | |||| ||||||||||||| |||||||||||||||||||||||| |||| |    
T  49626843 tgtgaaaatcacttatttagatagaaagaaaggggaaaaaagatgcagaggggtgattttaggtcaaagaatgacctaaaaccacccctcctcgatgagt 49626744  T
Q  181 gaaggagaaagaaaacttataaagaaagtggagttt 216  Q
    ||| ||||| ||| ||||| | ||||  ||||||||    
T  49626743 gaaagagaaggaacacttagagagaagttggagttt 49626708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 79 - 215
Target Start/End: Complemental strand, 31317688 - 31317550
Alignment:
Q  79 tatgtgtgaaaaccactcatttaaattgaaagaaataggaaaaagatgcatatg-ggtcattttaggtcaa-aaatgacctaaaaccacccctcctcaat 176  Q
    ||||||||||||||||| ||||||||||||||||  |||||||||||||| | | ||| ||| || ||||| |||| |||||||||||   | |||| ||    
T  31317688 tatgtgtgaaaaccacttatttaaattgaaagaatgaggaaaaagatgcagaggaggtgattctatgtcaacaaattacctaaaaccataacgcctcgat 31317589  T
Q  177 gaatgaaggagaaagaaaacttataaagaaagtggagtt 215  Q
    ||||||| ||||||||||| ||| | |||| ||||||||    
T  31317588 gaatgaaagagaaagaaaatttagagagaatgtggagtt 31317550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 194
Target Start/End: Original strand, 11462605 - 11462720
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg---aaaaagatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatga 178  Q
    ||||||| ||||| ||||| ||||||||||| |||   ||||||||||| | |||| ||| ||||||||||| | |||||||| |||||||| |||||||    
T  11462605 tgtgaaacccacttatttagattgaaagaaaaaggggaaaaaagatgcagaggggtgattctaggtcaaaaaataacctaaaatcacccctcgtcaatga 11462704  T
Q  179 atgaaggagaaagaaa 194  Q
    | ||||||||||||||    
T  11462705 acgaaggagaaagaaa 11462720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 45415493 - 45415379
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg--aaaaagatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaa 179  Q
    ||||||||||||| |||||||||||||||||  ||  ||||||||| | | |||| ||| ||| ||||||| |||||||||||||||||||||| || ||    
T  45415493 tgtgaaaaccacttatttaaattgaaagaaaaggggaaaaaagatgtagaggggtgattctagatcaaaaaatgacctaaaaccacccctcctcgataaa 45415394  T
Q  180 tgaaggagaaagaaa 194  Q
     |||| |||||||||    
T  45415393 cgaagaagaaagaaa 45415379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 85 - 194
Target Start/End: Original strand, 51916812 - 51916924
Alignment:
Q  85 tgaaaaccactcatttaaattgaaagaaataggaaaaa--gatgcatatgggtcattttaggtcaaaaatga-cctaaaaccacccctcctcaatgaatg 181  Q
    ||||||||||| ||||| |||||||||||   ||||||  |||| | ||| || |||||||||||||||  | ||||||||||||||||||| ||||| |    
T  51916812 tgaaaaccacttatttagattgaaagaaaagagaaaaaaagatgtagatgagtgattttaggtcaaaaaatagcctaaaaccacccctcctctatgaacg 51916911  T
Q  182 aaggagaaagaaa 194  Q
    |||||||||||||    
T  51916912 aaggagaaagaaa 51916924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 199
Target Start/End: Complemental strand, 9341643 - 9341539
Alignment:
Q  97 atttaaattgaaagaaataggaaaaagatgcatatgggtcattttaggtc-aaaaatgacctaaaacca-cccctcctcaatgaatgaaggagaaagaaa 194  Q
    ||||| ||||||||||| ||||||||||||||||  ||| ||| || ||| |||||||||||||||||| |||||| || |||| |||| |||||||||     
T  9341643 atttatattgaaagaaagaggaaaaagatgcatacaggtgattctaagtcaaaaaatgacctaaaaccaccccctcttcgatgagtgaaagagaaagaag 9341544  T
Q  195 actta 199  Q
    |||||    
T  9341543 actta 9341539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 83 - 195
Target Start/End: Complemental strand, 940298 - 940184
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaaa--agatgcatatgggtcattttaggtcaaaaatgacctaaaaccacccctcctcaatgaat 180  Q
    ||||||||||||| ||||||||| |||||||  || |||  ||||||| |||||| ||| ||||| ||||||||| ||||||||| | ||||| |||||     
T  940298 tgtgaaaaccacttatttaaattaaaagaaaaggggaaacaagatgcagatgggtgattctaggtaaaaaatgacttaaaaccactcatcctcgatgaag 940199  T
Q  181 gaaggagaaagaaaa 195  Q
     || |||||||||||    
T  940198 aaaagagaaagaaaa 940184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 195
Target Start/End: Complemental strand, 3228166 - 3228089
Alignment:
Q  119 aaaagatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaatgaaggagaaagaaaa 195  Q
    |||||||| | |||||| ||| ||||| ||||| |||||||||||||||||||||  |||||||||||||||| ||||    
T  3228166 aaaagatgtagatgggtgattgtaggttaaaaaatgacctaaaaccacccctccttgatgaatgaaggagaaataaaa 3228089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 15836126 - 15836013
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatag-gaaaaagatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaat 180  Q
    ||||||||||||| ||||||||||| |||||  | |||||| ||| |||  ||| ||| ||||||||||| ||||||||||||||| |||||  ||||||    
T  15836126 tgtgaaaaccacttatttaaattgatagaaaaggagaaaaatatgtatagcggtgattctaggtcaaaaaatgacctaaaaccacctctccttgatgaat 15836027  T
Q  181 gaaggagaaagaaa 194  Q
     || ||||||||||    
T  15836026 caaagagaaagaaa 15836013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 194
Target Start/End: Complemental strand, 41177047 - 41177002
Alignment:
Q  149 aaatgacctaaaaccacccctcctcaatgaatgaaggagaaagaaa 194  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||    
T  41177047 aaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaa 41177002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 194
Target Start/End: Original strand, 35484603 - 35484650
Alignment:
Q  147 aaaaatgacctaaaaccacccctcctcaatgaatgaaggagaaagaaa 194  Q
    |||||||||||| |||||||||||||| ||||| ||||||||||||||    
T  35484603 aaaaatgacctacaaccacccctcctcgatgaacgaaggagaaagaaa 35484650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 194
Target Start/End: Original strand, 7337821 - 7337935
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaat-aggaaaaa-gatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaa 179  Q
    ||||||||||||| ||||| |||||||||||  |||||||| |||| | | |||| ||| ||| ||||||| |||| || ||||| |||||||| |||||    
T  7337821 tgtgaaaaccacttatttagattgaaagaaaagaggaaaaaagatgtagaggggtgattctagatcaaaaaatgacatagaaccatccctcctcgatgaa 7337920  T
Q  180 tgaaggagaaagaaa 194  Q
     ||||||||||||||    
T  7337921 cgaaggagaaagaaa 7337935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 192
Target Start/End: Complemental strand, 43412301 - 43412194
Alignment:
Q  85 tgaaaaccactcatttaaattgaaagaaataggaaaaa-gatgcatatgggtcattttaggtcaaaaatgacctaaaac-cacccctcctcaatgaatga 182  Q
    |||||| |||| ||||||||  ||||||| |||||||| ||| |||| |||| |||||| ||||||||||||  | ||| ||||||||||| ||||||||    
T  43412301 tgaaaatcacttatttaaatcaaaagaaagaggaaaaaagatacataggggtgattttaagtcaaaaatgac--acaactcacccctcctcgatgaatga 43412204  T
Q  183 aggagaaaga 192  Q
    | ||||||||    
T  43412203 aagagaaaga 43412194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 216
Target Start/End: Complemental strand, 44543204 - 44543071
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaaaagatgcatatgggtcattttaggtcaaa-aatgacctaaaaccacccctcctcaatgaatg 181  Q
    |||||||| |||| ||||| || ||||||||  | ||||||||||| | || | ||||||||||||| ||| |||||||| ||||| ||||| |||| ||    
T  44543204 tgtgaaaatcacttatttagatcgaaagaaagggaaaaaagatgcaga-ggctgattttaggtcaaagaataacctaaaagcacccttcctcgatgagtg 44543106  T
Q  182 aaggagaaagaaaacttataaagaaagtggagttt 216  Q
    || ||||| ||||||||| | ||||  ||||||||    
T  44543105 aaagagaaggaaaacttagagagaagttggagttt 44543071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 195
Target Start/End: Complemental strand, 50377259 - 50377147
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaa-taggaaaaagatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaat 180  Q
    ||||||||||||| ||||||||||||||||| | ||||||| ||| | | || | ||| ||||||||||| |||||||||||||  |||| || |||||     
T  50377259 tgtgaaaaccacttatttaaattgaaagaaaatgggaaaaaaatg-agagggatgattctaggtcaaaaaatgacctaaaacca-tcctcttcgatgaac 50377162  T
Q  181 gaaggagaaagaaaa 195  Q
    |||||||||||||||    
T  50377161 gaaggagaaagaaaa 50377147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 194
Target Start/End: Original strand, 35462195 - 35462310
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg--aaaaagatgcatatgggtcattttaggtcaaaa--atgacctaaaaccacccctcctcaatga 178  Q
    ||||||||||||| |||||||||||||||||  ||  ||||||||| | | || | ||| || || ||||  ||||||||||||||||| | |||||| |    
T  35462195 tgtgaaaaccacttatttaaattgaaagaaaaggggaaaaaagatgtagagggatgattctatgtaaaaaaaatgacctaaaaccacccattctcaataa 35462294  T
Q  179 atgaaggagaaagaaa 194  Q
    | ||||||||||||||    
T  35462295 acgaaggagaaagaaa 35462310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 193
Target Start/End: Original strand, 15435031 - 15435143
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg-aaaaagatgcatatgggtcattttaggtc-aaaaatgacctaaaaccacccctcctcaatgaat 180  Q
    |||||||| |||| ||||| |||||||||||  || ||||||||| | | || | ||| ||| || ||||||||||||||||| ||||||||  ||||||    
T  15435031 tgtgaaaaacacttatttagattgaaagaaaagggaaaaaagatgtagagggttgattctagatcaaaaaatgacctaaaaccgcccctccttgatgaat 15435130  T
Q  181 gaaggagaaagaa 193  Q
    |||| ||||||||    
T  15435131 gaagaagaaagaa 15435143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 199
Target Start/End: Original strand, 32679324 - 32679376
Alignment:
Q  147 aaaaatgacctaaaaccacccctcctcaatgaatgaaggagaaagaaaactta 199  Q
    ||||||||| ||||||||||||||||| | || |||| |||||||||||||||    
T  32679324 aaaaatgacataaaaccacccctcctcgacgagtgaaagagaaagaaaactta 32679376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 194
Target Start/End: Complemental strand, 44915513 - 44915465
Alignment:
Q  147 aaaaatgacctaaaacc-acccctcctcaatgaatgaaggagaaagaaa 194  Q
    ||||||||||||||||| |||||||||| ||||||||| ||||||||||    
T  44915513 aaaaatgacctaaaaccaacccctcctcgatgaatgaatgagaaagaaa 44915465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 170
Target Start/End: Complemental strand, 40646647 - 40646561
Alignment:
Q  84 gtgaaaaccactcatttaaattgaaagaaataggaaaaagatgcatatgggtcattttaggtcaa-aaatgacctaaaaccacccctc 170  Q
    ||||||| |||| ||||| ||||||| |||||| ||||||||| | ||| || |||||||||||| || ||||| |||||||||||||    
T  40646647 gtgaaaatcacttatttagattgaaataaatag-aaaaagatgaagatgagtgattttaggtcaagaattgacccaaaaccacccctc 40646561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 191
Target Start/End: Complemental strand, 1742214 - 1742104
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaag-aaataggaaaaagatgcatatgggtcattttaggtc-aaaaatgacctaaaaccacccctcctcaatgaat 180  Q
    ||||||||||||| ||||| |||||||| |||  || |||||||| | | |||| ||| |||||| ||||||||||||||||||||  ||||  |||||     
T  1742214 tgtgaaaaccacttatttagattgaaagaaaagggggaaaagatggagaggggtgattctaggtcaaaaaatgacctaaaaccaccattccttgatgaac 1742115  T
Q  181 gaaggagaaag 191  Q
    ||| |||||||    
T  1742114 gaaagagaaag 1742104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 193
Target Start/End: Original strand, 7836991 - 7837037
Alignment:
Q  147 aaaaatgacctaaaaccacccctcctcaatgaatgaaggagaaagaa 193  Q
    ||||||||||||||||||||| ||||| ||||| ||| |||||||||    
T  7836991 aaaaatgacctaaaaccacccttcctcgatgaacgaaagagaaagaa 7837037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 194
Target Start/End: Original strand, 23291801 - 23291917
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaag-aaataggaaaaagatgcatatgggtcattttaggtc-aaaaatgacctaa---aaccacccctcctcaatg 177  Q
    ||||||||||||| ||||| |||||||| ||| || |||||||||   | |||| ||| |||||| |||||||||||||   |||||||| | ||| |||    
T  23291801 tgtgaaaaccacttatttagattgaaagaaaagagaaaaaagatgtcgaggggtgattctaggtcaaaaaatgacctaaaataaccaccctttctcgatg 23291900  T
Q  178 aatgaaggagaaagaaa 194  Q
    || ||||||||||||||    
T  23291901 aacgaaggagaaagaaa 23291917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 199
Target Start/End: Complemental strand, 48750122 - 48750005
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaaaa-gatgcatatgggtcattttaggtcaaaaat-gacctaaaaccacccctcctcaatgaat 180  Q
    |||||||| |||| ||||| |||||||||||  ||||||| |||||| | | || ||| |||||||||| | ||||||| | ||||||||||| |||| |    
T  48750122 tgtgaaaatcacttatttagattgaaagaaaggggaaaaaagatgca-aggagtgattctaggtcaaaatttgacctaatatcacccctcctcgatgagt 48750024  T
Q  181 gaaggagaaagaaaactta 199  Q
    ||| ||| |||||||||||    
T  48750023 gaaagaggaagaaaactta 48750005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 194
Target Start/End: Complemental strand, 14872570 - 14872459
Alignment:
Q  87 aaaaccactcatttaaattgaaagaaatagg---aaaaagatgcatatgggtcattttaggtc-aaaaatgacctaaaaccacccctcctcaatgaatga 182  Q
    ||||||||| ||||| ||||||||||| |||   ||||||||| | | | || ||| || ||| |||||||||| |||||||| ||| ||| ||||||||    
T  14872570 aaaaccacttatttacattgaaagaaaaagggaaaaaaagatgtagaggagtgattctaagtcaaaaaatgaccgaaaaccacaccttctcgatgaatga 14872471  T
Q  183 aggagaaagaaa 194  Q
    || |||||||||    
T  14872470 agaagaaagaaa 14872459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 34479429 - 34479380
Alignment:
Q  79 tatgtgtgaaaaccactcatttaaattgaaagaaataggaaaaagatgca 128  Q
    ||||||||||||||||| ||||||||| |||||||  | |||||||||||    
T  34479429 tatgtgtgaaaaccacttatttaaattaaaagaaagggaaaaaagatgca 34479380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 197
Target Start/End: Complemental strand, 34528652 - 34528536
Alignment:
Q  81 tgtgtgaaaaccactcatttaaattgaaagaaataggaaaaagatgcatatgggtcattttaggtca-aaaatgacctaaaaccacccctcctcaatgaa 179  Q
    |||||| ||| |||| ||||| || ||||||||  ||||||||||||| | |||| ||| ||||||| |||||||| ||||||||| | || || ||||     
T  34528652 tgtgtggaaatcacttatttagatcgaaagaaag-ggaaaaagatgcagaggggtgattctaggtcaaaaaatgacataaaaccactcatcttcgatgag 34528554  T
Q  180 tgaaggagaaagaaaact 197  Q
    |||| || ||||||||||    
T  34528553 tgaaagaaaaagaaaact 34528536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 47132781 - 47132713
Alignment:
Q  147 aaaaatgacctaaaaccacccctcctcaatgaatgaaggagaaagaaaacttataaagaaagtggagttt 216  Q
    ||||||||||||||| ||||||||||||| || |||| || || ||||||||| ||||||  ||||||||    
T  47132781 aaaaatgacctaaaatcacccctcctcaacgagtgaaagaaaacgaaaactta-aaagaagttggagttt 47132713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 199
Target Start/End: Original strand, 34413249 - 34413368
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg--aaaaagatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaa 179  Q
    |||||||| |||| ||||| |||||||||||  ||  ||||||||||| | |||| ||| ||| | ||||| |||||||||| ||||||| ||| || |     
T  34413249 tgtgaaaatcacttatttagattgaaagaaaggggaaaaaaagatgcagaggggtgattctagataaaaaattgacctaaaatcacccctactcgataag 34413348  T
Q  180 tgaaggagaaagaaaactta 199  Q
    |||| |||||| ||||||||    
T  34413349 tgaaagagaaaaaaaactta 34413368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 3e-26; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 79 - 207
Target Start/End: Original strand, 12199847 - 12199975
Alignment:
Q  79 tatgtgtgaaaaccactcatttaaattgaaagaaataggaaaaagatgcatatgggtcattttaggtcaaaaatgacctaaaaccacccctcctcaatga 178  Q
    ||||||||||||||||  || ||||||||||||||  ||||||||||||| |||||| ||| || |||||||||||| ||| ||||||  ||||||||||    
T  12199847 tatgtgtgaaaaccacatatgtaaattgaaagaaaggggaaaaagatgcagatgggtgattctatgtcaaaaatgacttaataccaccattcctcaatga 12199946  T
Q  179 atgaaggagaaagaaaacttataaagaaa 207  Q
    |||||| ||||  |||||||| |||||||    
T  12199947 atgaagaagaagaaaaacttaaaaagaaa 12199975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 22611134 - 22611021
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg--aaaaagatgcatatgggtcattttaggtcaaaaatgacctaaaaccacccctcctcaatgaat 180  Q
    ||||||||||||| ||||| |||||||||||  ||  ||||||||| | |||||| ||| ||||||||||||||||||||||||||||||||| | |||     
T  22611134 tgtgaaaaccacttatttagattgaaagaaaaggggaaaaaagatgtagatgggtgattctaggtcaaaaatgacctaaaaccacccctcctcgacgaac 22611035  T
Q  181 gaaggagaaagaaa 194  Q
    ||||||||||||||    
T  22611034 gaaggagaaagaaa 22611021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 83 - 194
Target Start/End: Original strand, 26633829 - 26633942
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaat-aggaaaaagatgcatatgggtcattttaggtcaaaa-atgacctaaaaccacccctcctcaatgaat 180  Q
    ||||||||||||| ||||| |||||||||||  |||||||||||| ||| |||| ||| |||||||||| ||||||||| |||||||||||||||||||     
T  26633829 tgtgaaaaccacttatttagattgaaagaaaagaggaaaaagatgtataggggtgattctaggtcaaaaaatgacctaagaccacccctcctcaatgaac 26633928  T
Q  181 gaaggagaaagaaa 194  Q
    |||| |||||||||    
T  26633929 gaagaagaaagaaa 26633942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 194
Target Start/End: Original strand, 19853670 - 19853783
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg--aaaaagatgcatatgggtcattttaggtcaaaaatgacctaaaaccacccctcctcaatgaat 180  Q
    ||||||||||||| ||||| |||| ||||||  ||  ||||||||| | | |||| ||| ||||||||||||||||||||||||||||||||| ||||||    
T  19853670 tgtgaaaaccacttatttagattggaagaaaaggggaaaaaagatgtagaggggtgattctaggtcaaaaatgacctaaaaccacccctcctcgatgaat 19853769  T
Q  181 gaaggagaaagaaa 194  Q
    ||||| ||||||||    
T  19853770 gaaggggaaagaaa 19853783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 83 - 216
Target Start/End: Original strand, 22558622 - 22558759
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg---aaaaagatgcatatgggtcattttaggtc-aaaaatgacctaaaaccacccctcctcaatga 178  Q
    ||||||||||||| ||||| ||||||||||| |||   ||||||||| | |  ||| ||| || ||| ||||||||||||||||||||||||||||||||    
T  22558622 tgtgaaaaccacttatttagattgaaagaaaaaggggaaaaaagatgtagagaggtgattctatgtcaaaaaatgacctaaaaccacccctcctcaatga 22558721  T
Q  179 atgaaggagaaagaaaacttataaagaaagtggagttt 216  Q
    | ||||||||||||||  ||| | ||||| ||||||||    
T  22558722 acgaaggagaaagaaagtttagagagaaattggagttt 22558759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 83 - 194
Target Start/End: Original strand, 21686399 - 21686512
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg--aaaaagatgcatatgggtcattttaggtcaaaaatgacctaaaaccacccctcctcaatgaat 180  Q
    ||||||||||||| ||||| |||||||||||  ||  ||||||||| | | |||| ||||||||||||||| ||||| ||||||||||||||| |||||     
T  21686399 tgtgaaaaccacttatttagattgaaagaaaaggggaaaaaagatgtagaggggtgattttaggtcaaaaaagacctcaaaccacccctcctcgatgaac 21686498  T
Q  181 gaaggagaaagaaa 194  Q
     |||||||||||||    
T  21686499 aaaggagaaagaaa 21686512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 2520728 - 2520614
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg--aaaaagatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaa 179  Q
    ||||||||||||| ||||| |||||| ||||  ||  ||||||||| | | |||| ||| ||||||||||| |||||||||||||||||||||| |||||    
T  2520728 tgtgaaaaccacttatttagattgaacgaaaaggggaaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaa 2520629  T
Q  180 tgaaggagaaagaaa 194  Q
     ||||||||||||||    
T  2520628 cgaaggagaaagaaa 2520614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 53810979 - 53810865
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg--aaaaagatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaa 179  Q
    |||||||| |||| |||||||||||||||||  ||  ||||||||| | | |||| ||| ||||||||||| |||||||||||||||||||||| |||||    
T  53810979 tgtgaaaatcacttatttaaattgaaagaaaagggggaaaaagatgtagaggggtgattataggtcaaaaaatgacctaaaaccacccctcctcgatgaa 53810880  T
Q  180 tgaaggagaaagaaa 194  Q
     ||||||| ||||||    
T  53810879 cgaaggaggaagaaa 53810865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 82 - 195
Target Start/End: Original strand, 2437441 - 2437554
Alignment:
Q  82 gtgtgaaaaccactcatttaaattgaaagaaataggaaaaagatgcatatgggtcattttaggtcaaaaatgacctaaaaccacccctcctcaatgaatg 181  Q
    |||||||||| ||| |||||||||||||||||||| ||||  ||||| ||  || ||| ||||||||||||||||||||||||| | |  |  || ||||    
T  2437441 gtgtgaaaactacttatttaaattgaaagaaatagaaaaataatgcagataagtgattataggtcaaaaatgacctaaaaccactcatatttgataaatg 2437540  T
Q  182 aaggagaaagaaaa 195  Q
    ||||||||||||||    
T  2437541 aaggagaaagaaaa 2437554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 78 - 194
Target Start/End: Complemental strand, 9178313 - 9178194
Alignment:
Q  78 ttatgtgtgaaaaccactcatttaaattgaaagaaatagga--aaaagatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctca 174  Q
    |||| ||||||||||| | ||||| |||||||||||  |||  |||||||| | | |||| ||| ||||||||||| |||||||| ||||||||||||      
T  9178313 ttatatgtgaaaaccatttatttagattgaaagaaaagggagaaaaagatgtagaagggtgattctaggtcaaaaaatgacctaagaccacccctccttg 9178214  T
Q  175 atgaatgaaggagaaagaaa 194  Q
    ||||||||||||||||||||    
T  9178213 atgaatgaaggagaaagaaa 9178194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 216
Target Start/End: Complemental strand, 22300794 - 22300660
Alignment:
Q  84 gtgaaaaccactcatttaaattgaaagaaataggaaaaag-atgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaatg 181  Q
    ||||||| |||| |||||||||||||||||   ||||||| ||||| | |||| ||||||||||||||| |||||||||||||| ||||||| | || ||    
T  22300794 gtgaaaatcacttatttaaattgaaagaaaagagaaaaaggatgcaaaggggtgattttaggtcaaaaaatgacctaaaaccactcctcctcgacgagtg 22300695  T
Q  182 aaggagaaagaaaacttataaagaaagtggagttt 216  Q
    || |||||| |||| ||| | ||||  ||||||||    
T  22300694 aaagagaaataaaatttagagagaagttggagttt 22300660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 83 - 195
Target Start/End: Complemental strand, 27651898 - 27651784
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg-aaaaagatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaat 180  Q
    |||||||| |||| ||||| |||||||||||| || ||||||||||| |||||| ||  ||||||||||| |||||||| | ||||||||||| |||| |    
T  27651898 tgtgaaaatcacttatttagattgaaagaaatgggaaaaaagatgcagatgggtgatcctaggtcaaaaattgacctaacatcacccctcctcgatgagt 27651799  T
Q  181 gaaggagaaagaaaa 195  Q
    ||| ||| |||||||    
T  27651798 gaaagaggaagaaaa 27651784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 216
Target Start/End: Original strand, 4142913 - 4143048
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg--aaaaagatgcatatgggtcattttaggtcaaaa-atgacctaaaaccacccctcctcaatgaa 179  Q
    ||||||||| ||| ||||| |||||||||||  ||  ||||||||| | | |||| ||| |||||||||| ||||||||||||||||||||||| |||||    
T  4142913 tgtgaaaac-acttatttagattgaaagaaaaggggaaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaa 4143011  T
Q  180 tgaaggagaaagaaaacttataaagaaagtggagttt 216  Q
      |||||||||||||  ||||| ||||  ||||||||    
T  4143012 caaaggagaaagaaagtttatagagaagttggagttt 4143048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 216
Target Start/End: Complemental strand, 10496292 - 10496157
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg--aaaaagatgcatatgggtcattttaggtcaaaaat-gacctaaaaccacccctcctcaatgaa 179  Q
    ||||||||||||| ||||| ||| |||||||  ||  ||||||||| ||| |||| ||| |||||||||||| ||||||||||||| ||||||| |||||    
T  10496292 tgtgaaaaccacttatttagattaaaagaaaatgggaaaaaagatgtata-gggtgattctaggtcaaaaattgacctaaaaccacacctcctcgatgaa 10496194  T
Q  180 tgaaggagaaagaaaacttataaagaaagtggagttt 216  Q
     ||||||| ||||||  ||| ||||||  ||||||||    
T  10496193 cgaaggagtaagaaagtttagaaagaagttggagttt 10496157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 215
Target Start/End: Original strand, 36204540 - 36204673
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaa-aagatgcatatgggtcattttaggtcaaaaatgacctaaaaccacccctcctcaatgaatg 181  Q
    |||| ||| |||| |||||||| |||||||| |||||| || ||||| | |||| ||| ||||| |||||||||||||||||| || ||||  |||| ||    
T  36204540 tgtggaaatcacttatttaaatcgaaagaaaaaggaaacaaaatgcagaggggtgattctaggtaaaaaatgacctaaaaccatccatccttgatgattg 36204639  T
Q  182 aaggagaaagaaaacttataaagaaagtggagtt 215  Q
    || |||||||||||| || | |||| ||||||||    
T  36204640 aaagagaaagaaaacctagagagaaggtggagtt 36204673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 178
Target Start/End: Complemental strand, 36161658 - 36161567
Alignment:
Q  87 aaaaccactcatttaaattgaaagaaataggaaaaagatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatga 178  Q
    |||| |||| ||||| |||||||||||| ||||||| ||||| |||||| ||| ||||||||||| ||||||||||||||| |||||| ||||    
T  36161658 aaaatcacttatttagattgaaagaaatgggaaaaa-atgcagatgggtgattctaggtcaaaaaatgacctaaaaccacctctcctcgatga 36161567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 199
Target Start/End: Complemental strand, 43095518 - 43095466
Alignment:
Q  147 aaaaatgacctaaaaccacccctcctcaatgaatgaaggagaaagaaaactta 199  Q
    |||||||||||||||| |||| ||||||| |||||||||||||||||||||||    
T  43095518 aaaaatgacctaaaactacccttcctcaacgaatgaaggagaaagaaaactta 43095466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 191
Target Start/End: Original strand, 56040802 - 56040915
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg---aaaaagatgcatatgggtcattttaggtcaaaa--atgacctaaaaccacccctcctcaatg 177  Q
    ||||||||||||| ||||| ||||||||||  |||   ||||||||| | | |||| ||| ||||||||||  |||||||||||||||| ||||||| ||    
T  56040802 tgtgaaaaccacttatttagattgaaagaagaaggggaaaaaagatgtagaggggtgattctaggtcaaaaaaatgacctaaaaccacctctcctcagtg 56040901  T
Q  178 aatgaaggagaaag 191  Q
    || |||||||||||    
T  56040902 aacgaaggagaaag 56040915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 13634066 - 13633951
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagga----aaaagatgcatatgggtcattttaggtcaaaaatgacctaaaaccacccctcctcaatga 178  Q
    ||||||||||||| ||||| |||||||||||  ||     |||||||| | | |||| ||| || ||||||||||||||||||||||| |||||| ||||    
T  13634066 tgtgaaaaccacttatttagattgaaagaaaaggggggggaaaagatgtagaggggtgattctatgtcaaaaatgacctaaaaccaccactcctcgatga 13633967  T
Q  179 atgaaggagaaagaaa 194  Q
      ||||||||||||||    
T  13633966 gcgaaggagaaagaaa 13633951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 51888441 - 51888490
Alignment:
Q  147 aaaaatgacctaaaaccacccctcctcaatgaatgaaggagaaagaaaac 196  Q
    ||||||||||||||||||||||||||| |||| |||| ||||||||||||    
T  51888441 aaaaatgacctaaaaccacccctcctcgatgagtgaaagagaaagaaaac 51888490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 83 - 198
Target Start/End: Original strand, 22038959 - 22039074
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaaaagatgcatatgggtcattttaggtcaaaaat-gacctaaaaccacccctcctcaatgaatg 181  Q
    |||||||| |||| ||||| || ||||||||  | ||||||||||| | |||| ||| ||| || ||||| ||||||||||||||||| ||| |||| ||    
T  22038959 tgtgaaaatcacttatttagatagaaagaaagggaaaaaagatgcaaa-gggtgattctagatccaaaattgacctaaaaccacccctgctcgatgagtg 22039057  T
Q  182 aaggagaaagaaaactt 198  Q
    || ||||||||||||||    
T  22039058 aaagagaaagaaaactt 22039074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 190
Target Start/End: Complemental strand, 32766465 - 32766355
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg--aaaaagatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaa 179  Q
    |||||||| |||| | ||| |||||||||||  ||  ||||||||| | | |||| ||| ||||||||||| |||||||||||||||||  |||||||||    
T  32766465 tgtgaaaaacacttacttagattgaaagaaaaggggaaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccaccccctctcaatgaa 32766366  T
Q  180 tgaaggagaaa 190  Q
     ||||||||||    
T  32766365 cgaaggagaaa 32766355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 194
Target Start/End: Original strand, 9165195 - 9165315
Alignment:
Q  78 ttatgtgtgaaaaccactcatttaaattgaaagaaatag--gaaaaagatgcatatgggtcattttaggtcaaaa--atgacctaaaaccacccctcctc 173  Q
    |||| ||||||||||||| ||||| ||||||||| |  |  |||||||||| | | |||| ||| ||||| ||||  |||||||||||||||| ||||||    
T  9165195 ttatatgtgaaaaccacttatttagattgaaagataagggagaaaaagatgtagaggggtgattctaggtaaaaaatatgacctaaaaccacctctcctc 9165294  T
Q  174 aatgaatgaaggagaaagaaa 194  Q
     |||||||| ||| |||||||    
T  9165295 gatgaatgatggaaaaagaaa 9165315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 199
Target Start/End: Complemental strand, 36194663 - 36194545
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaa-taggaaaaagatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaat 180  Q
    |||||||| |||| |||||||||||||||||  || ||||||||||| | || |  |||||||||||||| ||| |||||| ||||| ||||| || | |    
T  36194663 tgtgaaaatcacttatttaaattgaaagaaaggagaaaaaagatgcagagggatgtttttaggtcaaaaattgatctaaaatcacccatcctcgataagt 36194564  T
Q  181 gaaggagaaagaaaactta 199  Q
    ||| ||| |||||||||||    
T  36194563 gaaagaggaagaaaactta 36194545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 54021812 - 54021698
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaat-aggaaaaa-gatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaa 179  Q
    ||||||||||||| ||||| |||||||||||  |||||||| |||| | | || | |||||| |||||||| |||||||||||||| |  |||| |||||    
T  54021812 tgtgaaaaccacttatttagattgaaagaaaagaggaaaaaagatgtagagggatgattttatgtcaaaaaatgacctaaaaccactctccctcgatgaa 54021713  T
Q  180 tgaaggagaaagaaa 194  Q
    ||||| |||||||||    
T  54021712 tgaagaagaaagaaa 54021698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 190
Target Start/End: Complemental strand, 5119290 - 5119179
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg--aaaaagatgcatatgggtcattttaggtcaaaaa--tgacctaaaaccacccctcctcaatga 178  Q
    ||||||||||||| ||||| ||||||||||   ||  ||||||||| | | |||| ||| ||||| |||||  |||| ||||||||||||||||  ||||    
T  5119290 tgtgaaaaccacttatttagattgaaagaagagggggaaaaagatgtagaggggtgattctaggtaaaaaaaatgacataaaaccacccctccttgatga 5119191  T
Q  179 atgaaggagaaa 190  Q
    ||||||||||||    
T  5119190 atgaaggagaaa 5119179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 190
Target Start/End: Complemental strand, 35348256 - 35348147
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaaaa-gatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaat 180  Q
    ||||||||||||| ||||| |||||||||||  ||||||| |||| | |  ||| ||| ||||||||||| |||||||||| ||||||||| | ||||      
T  35348256 tgtgaaaaccacttatttagattgaaagaaaagggaaaaaagatgtagagaggtgattctaggtcaaaaaatgacctaaaatcacccctccacgatgagc 35348157  T
Q  181 gaaggagaaa 190  Q
    ||||||||||    
T  35348156 gaaggagaaa 35348147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 53444016 - 53443967
Alignment:
Q  141 taggtcaaaaatgacctaaaaccacccctcctcaatgaatgaaggagaaa 190  Q
    |||||||||||||||||||||||| | |||||||||||| ||| ||||||    
T  53444016 taggtcaaaaatgacctaaaaccaacgctcctcaatgaacgaaagagaaa 53443967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 194
Target Start/End: Complemental strand, 21662377 - 21662322
Alignment:
Q  139 tttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaatgaaggagaaagaaa 194  Q
    ||||||||||||| ||||||||||||||||||||||  ||||||||| |||||||||    
T  21662377 tttaggtcaaaaaatgacctaaaaccacccctcctc-gtgaatgaagaagaaagaaa 21662322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 194
Target Start/End: Complemental strand, 21671141 - 21671086
Alignment:
Q  139 tttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaatgaaggagaaagaaa 194  Q
    ||||||||||||| ||||||||||||||||||||||  ||||||||| |||||||||    
T  21671141 tttaggtcaaaaaatgacctaaaaccacccctcctc-gtgaatgaagaagaaagaaa 21671086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 194
Target Start/End: Complemental strand, 33920936 - 33920889
Alignment:
Q  147 aaaaatgacctaaaaccacccctcctcaatgaatgaaggagaaagaaa 194  Q
    ||||||||||||||||||||| | ||| |||||||||| |||||||||    
T  33920936 aaaaatgacctaaaaccacccattctcgatgaatgaagaagaaagaaa 33920889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 189
Target Start/End: Complemental strand, 37030218 - 37030107
Alignment:
Q  79 tatgtgtgaaaaccactcatttaaattgaaagaaatagga-aaaagatgcatatgggtcattttaggtcaaaaatgacctaaaaccacccctcctcaatg 177  Q
    |||||||||||| || | |||||||||||||||||   || |||||||||| | |||| ||| || || |||||  | ||| ||||| |||||||| |||    
T  37030218 tatgtgtgaaaatcatttatttaaattgaaagaaaggagagaaaagatgcaaaggggtgattctaagtaaaaaagaatctagaaccatccctcctcgatg 37030119  T
Q  178 aatgaaggagaa 189  Q
    ||||||||||||    
T  37030118 aatgaaggagaa 37030107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 43510150 - 43510036
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaaaa--gatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaa 179  Q
    ||||||| ||||| ||||| |||||||||||  |||||||  |||| | | | || ||| ||||||||||| |||||||||||||||| || || |||||    
T  43510150 tgtgaaagccacttatttagattgaaagaaaagggaaaaaaagatgtagaggagtgattctaggtcaaaaaatgacctaaaaccacccttcttcgatgaa 43510051  T
Q  180 tgaaggagaaagaaa 194  Q
     ||||||||| ||||    
T  43510050 cgaaggagaatgaaa 43510036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 199
Target Start/End: Complemental strand, 18935736 - 18935619
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaaaa-gatgcatatgggtcattttaggtcaaaaat-gacctaaaaccacccctcctcaatgaat 180  Q
    |||||||| |||| ||||| ||| |||||||  ||||||| |||||| | |||| ||| |||||||||||| ||||| ||| ||||||||||| ||||      
T  18935736 tgtgaaaatcactaatttagattaaaagaaaggggaaaaaagatgcaga-gggtgattctaggtcaaaaattgaccttaaatcacccctcctcgatgagc 18935638  T
Q  181 gaaggagaaagaaaactta 199  Q
    ||| ||| |||||||||||    
T  18935637 gaaagaggaagaaaactta 18935619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 194
Target Start/End: Original strand, 48257647 - 48257721
Alignment:
Q  121 aagatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaatgaaggagaaagaaa 194  Q
    |||||| | |||||| ||| ||||||||||| |||| ||||||||||||||||| ||| | ||| ||||||||||    
T  48257647 aagatgtagatgggtgattctaggtcaaaaaatgacataaaaccacccctcctcgatgtacgaatgagaaagaaa 48257721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 194
Target Start/End: Original strand, 24099228 - 24099343
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg--aaaaagatgcatatgggtcattttaggtc--aaaaatgacctaaaaccacccctcctcaatga 178  Q
    |||||||| |||| ||||| |||||||||||  ||  ||||||||| | | || | ||| ||||||  |||||||||||||||||||| |||||| ||||    
T  24099228 tgtgaaaatcacttatttagattgaaagaaaaggggaaaaaagatgtagagggatgattctaggtcaaaaaaatgacctaaaaccacctctcctcgatga 24099327  T
Q  179 atgaaggagaaagaaa 194  Q
    | | || |||||||||    
T  24099328 acgtagaagaaagaaa 24099343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 164
Target Start/End: Original strand, 10259104 - 10259136
Alignment:
Q  132 gggtcattttaggtcaaaaatgacctaaaacca 164  Q
    |||| ||||||||||||||||||||||||||||    
T  10259104 gggtgattttaggtcaaaaatgacctaaaacca 10259136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 2e-24; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 83 - 200
Target Start/End: Original strand, 26610903 - 26611019
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaaaagatgcatatgggtcattttaggtcaaaaatgacctaaaaccacccctcctcaatgaatga 182  Q
    |||| |||||||| ||||||||| |||||||  ||||||||||||||| |||| |||||||||||||||| ||||||||||| ||||| || ||||||||    
T  26610903 tgtggaaaccacttatttaaattcaaagaaaggggaaaaagatgcataagggtgattttaggtcaaaaataacctaaaacca-ccctcatcgatgaatga 26611001  T
Q  183 aggagaaagaaaacttat 200  Q
    |  ||| |||||||||||    
T  26611002 aaaagacagaaaacttat 26611019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 83 - 193
Target Start/End: Original strand, 19404913 - 19405025
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaaaa--gatgcatatgggtcattttaggtcaaaa-atgacctaaaaccacccctcctcaatgaa 179  Q
    ||||||||||||| ||||| ||||||||||| ||||||||  |||| | | |||| ||| |||||||||| ||||||||||||||||||| |||||||||    
T  19404913 tgtgaaaaccacttatttagattgaaagaaa-aggaaaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccaccccttctcaatgaa 19405011  T
Q  180 tgaaggagaaagaa 193  Q
    | ||||||||||||    
T  19405012 ttaaggagaaagaa 19405025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 79 - 167
Target Start/End: Complemental strand, 25255173 - 25255084
Alignment:
Q  79 tatgtgtgaaaaccactcatttaaattgaaagaaataggaaaaagatgcatatgggtcattttaggtca-aaaatgacctaaaaccaccc 167  Q
    ||||||||||||| ||| |||||||||||||||||  ||||||||||||| | |||| ||| ||||||| ||||||||||||||||||||    
T  25255173 tatgtgtgaaaacaacttatttaaattgaaagaaaggggaaaaagatgcaaaggggtgattataggtcaaaaaatgacctaaaaccaccc 25255084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 83 - 190
Target Start/End: Original strand, 37837617 - 37837726
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaaaa-gatgcatatgggtcattttaggtcaaaa-atgacctaaaaccacccctcctcaatgaat 180  Q
    |||| |||||||| ||||| |||||||||||  ||||||| |||| | | |||| ||| |||||||||| |||||||||||||||||||||||||||||     
T  37837617 tgtgtaaaccacttatttagattgaaagaaaagggaaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcaatgaac 37837716  T
Q  181 gaaggagaaa 190  Q
    ||||||||||    
T  37837717 gaaggagaaa 37837726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 79 - 199
Target Start/End: Complemental strand, 22087248 - 22087131
Alignment:
Q  79 tatgtgtgaaaaccactcatttaaattgaaagaaataggaaaaagatgcatatgggtcattttaggtc-aaaaatgacctaaaaccacccctcctcaatg 177  Q
    |||||||||| |||||| |||||||||||||||||  |||||||||||||     || ||| |||||| |||||||||| ||||||| ||||| || ||     
T  22087248 tatgtgtgaacaccacttatttaaattgaaagaaaggggaaaaagatgca----cgtgattctaggtcaaaaaatgaccaaaaaccatccctcttcgata 22087153  T
Q  178 aatgaaggagaaagaaaactta 199  Q
    ||||||||||||||||||||||    
T  22087152 aatgaaggagaaagaaaactta 22087131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 83 - 195
Target Start/End: Complemental strand, 47590244 - 47590132
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaaaagatgcatatgggtcattttaggtcaaaaatgacctaaaaccacccctcctcaatgaatga 182  Q
    ||||||||||||| ||||| ||||||||||   ||||||| ||| | | |||| ||| ||| ||||||||||||||||| ||||||||||| ||||| ||    
T  47590244 tgtgaaaaccacttatttagattgaaagaatagggaaaaaaatgtagaggggtgattctagttcaaaaatgacctaaaatcacccctcctctatgaacga 47590145  T
Q  183 aggagaaagaaaa 195  Q
    | |||||||||||    
T  47590144 atgagaaagaaaa 47590132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 83 - 191
Target Start/End: Original strand, 48316970 - 48317081
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg--aaaaagatgcatatgggtcattttaggtc-aaaaatgacctaaaaccacccctcctcaatgaa 179  Q
    ||||||||||||| |||||||||||||||||  ||  ||||||||| | | |||| ||| |||||| ||||||||||||||||||||||||||  |||||    
T  48316970 tgtgaaaaccacttatttaaattgaaagaaaagggggaaaaagatgtagaggggtgattctaggtccaaaaatgacctaaaaccacccctccttgatgaa 48317069  T
Q  180 tgaaggagaaag 191  Q
     |||||||||||    
T  48317070 cgaaggagaaag 48317081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 79 - 194
Target Start/End: Original strand, 39328947 - 39329065
Alignment:
Q  79 tatgtgtgaaaaccactcatttaaattgaaagaaatagg-aaaaagatgcatatgggtcattttaggt--caaaaatgacctaaaaccacccctcctcaa 175  Q
    ||||||||||||||||| |||||||||||||||||  || ||||||||||| |||||| ||| |||||   ||||| |||||||| |||| ||||||| |    
T  39328947 tatgtgtgaaaaccacttatttaaattgaaagaaaagggaaaaaagatgcagatgggtaattctaggtaaaaaaaaagacctaaacccactcctcctcga 39329046  T
Q  176 tgaatgaaggagaaagaaa 194  Q
    ||||  |||||||||||||    
T  39329047 tgaacaaaggagaaagaaa 39329065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 216
Target Start/End: Original strand, 9450295 - 9450431
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaaa--agatgcatatgggtcattttaggtcaaaa-atgacctaaaaccacccctcctcaatgaa 179  Q
    |||||||| |||| ||||| |||||||||||  || |||  ||||| | |||||| ||| |||||||||| |||||||||||||| |||||||| |||||    
T  9450295 tgtgaaaatcacttatttagattgaaagaaaaggggaaacaagatgtagatgggtgattctaggtcaaaaaatgacctaaaaccatccctcctcgatgaa 9450394  T
Q  180 tgaaggagaaagaaaacttataaagaaagtggagttt 216  Q
     ||||||||||||||  ||| ||||||  ||||||||    
T  9450395 cgaaggagaaagaaagtttaaaaagaagttggagttt 9450431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 82 - 206
Target Start/End: Original strand, 5348746 - 5348867
Alignment:
Q  82 gtgtgaaaaccactcatttaaattgaaagaaataggaaaaagatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaat 180  Q
    ||||||||| |||| |||||||||||||||||  | |||||||||   | |||| ||| ||||||||||| | ||||||||| ||| |||||| ||||||    
T  5348746 gtgtgaaaatcacttatttaaattgaaagaaaaggaaaaaagatg---aggggtgattctaggtcaaaaacttacctaaaac-acctctcctcgatgaat 5348841  T
Q  181 gaaggagaaagaaaacttataaagaa 206  Q
     |||||||||||||||||| ||||||    
T  5348842 aaaggagaaagaaaacttaaaaagaa 5348867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 83 - 199
Target Start/End: Complemental strand, 22742870 - 22742752
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaaaa-gatgcatatgggtcattttaggtcaaaaat-gacctaaaaccacccctcctcaatgaat 180  Q
    |||||||| |||| ||||| |||||||||||  ||||||| |||||| | |||| ||| ||| | |||||| ||||||||| ||||||||||| ||||||    
T  22742870 tgtgaaaatcacttatttagattgaaagaaaggggaaaaaagatgcagaggggtgattctagattaaaaattgacctaaaatcacccctcctcgatgaat 22742771  T
Q  181 gaaggagaaagaaaactta 199  Q
    ||| ||| |||||||||||    
T  22742770 gaaagaggaagaaaactta 22742752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 76 - 216
Target Start/End: Complemental strand, 25068024 - 25067883
Alignment:
Q  76 ctttatgtgtgaaaaccactcatttaaattgaaagaaataggaaaaagatgcatatgggtcattttaggtcaaaa-atgacctaaaaccacccctcctca 174  Q
    |||||| |||| ||| |||| ||||| |||||||||||||| |||| |||||| |||||| |||  ||||||||| ||||| ||||||||| | | |||     
T  25068024 ctttatatgtggaaatcacttatttagattgaaagaaatagaaaaaggatgcaaatgggtgattcaaggtcaaaagatgacataaaaccactcattctcg 25067925  T
Q  175 atgaatgaaggagaaagaaaacttataaagaaagtggagttt 216  Q
    || |||||| || ||||||||||||   |||| |||||||||    
T  25067924 ataaatgaaagaaaaagaaaacttagtgagaaggtggagttt 25067883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 79 - 170
Target Start/End: Complemental strand, 38798723 - 38798630
Alignment:
Q  79 tatgtgtgaaaaccactcatttaaattgaaagaaataggaaaa-agatgcatatgggtcattttaggtcaaa-aatgacctaaaaccacccctc 170  Q
    ||||| ||||||||||| ||||||||||||||||| ||||||| ||||| | |||||| ||| || |||||| ||||||||||||||| |||||    
T  38798723 tatgtttgaaaaccacttatttaaattgaaagaaaaaggaaaagagatgtagatgggtgattctatgtcaaagaatgacctaaaaccatccctc 38798630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 84 - 171
Target Start/End: Original strand, 45349962 - 45350051
Alignment:
Q  84 gtgaaaaccactcatttaaattgaaagaaatagg-aaaaagatgcatatgggtcattttaggtc-aaaaatgacctaaaaccacccctcc 171  Q
    |||||||||||| ||||||||||||||||| ||| ||||||| | | |||||| ||| |||||| |||||||||||||||||| ||||||    
T  45349962 gtgaaaaccacttatttaaattgaaagaaaaaggaaaaaagaagtagatgggtgattctaggtcaaaaaatgacctaaaaccaaccctcc 45350051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 195
Target Start/End: Original strand, 30756977 - 30757092
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg--aaaaagatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaa 179  Q
    |||||||| |||| ||||| |||||||||||  ||  ||||||||| | | |||| ||| ||||||||||| | |||||||||||||||||||| |||||    
T  30756977 tgtgaaaatcacttatttagattgaaagaaaaggggaaaaaagatgtagaggggtgattctaggtcaaaaaattacctaaaaccacccctcctcgatgaa 30757076  T
Q  180 tgaaggagaaagaaaa 195  Q
     ||| |||||||||||    
T  30757077 cgaaagagaaagaaaa 30757092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 199
Target Start/End: Original strand, 38051231 - 38051343
Alignment:
Q  88 aaaccactcatttaaattgaaagaaataggaaaaagatgcatatgggtcattttaggtcaaaa-atgacctaaaaccacccctcctcaatgaatgaagga 186  Q
    |||||||  ||||| ||| |||||||  |||||| |||| | |||||| ||| ||||| |||| |||||||||||||||||||||| ||||| ||||| |    
T  38051231 aaaccacatatttagattaaaagaaaggggaaaatgatgtagatgggtgattctaggttaaaatatgacctaaaaccacccctccttaatgagtgaagaa 38051330  T
Q  187 gaaagaaaactta 199  Q
    |||||| ||||||    
T  38051331 gaaagagaactta 38051343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 85 - 194
Target Start/End: Original strand, 39171751 - 39171864
Alignment:
Q  85 tgaaaaccactcatttaaattgaaagaaataggaaaaa---gatgcatatgggtcattttaggtcaaaa-atgacctaaaaccacccctcctcaatgaat 180  Q
    ||||||||||| ||||| || |||||||| ||||||||   |||| | | |||| ||| |||||||||| |||||||| |||||||||||||| |||||     
T  39171751 tgaaaaccacttatttagatcgaaagaaaaaggaaaaaaaagatgtagaggggtgattctaggtcaaaaaatgacctacaaccacccctcctcgatgaac 39171850  T
Q  181 gaaggagaaagaaa 194  Q
    |||| |||||||||    
T  39171851 gaagaagaaagaaa 39171864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 147 - 194
Target Start/End: Complemental strand, 42978474 - 42978427
Alignment:
Q  147 aaaaatgacctaaaaccacccctcctcaatgaatgaaggagaaagaaa 194  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  42978474 aaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaa 42978427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 83 - 199
Target Start/End: Original strand, 24351002 - 24351120
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaaaag-atgcatatgggtcattttaggtcaaaaat-gacctaaaaccacccctcctcaatgaat 180  Q
    |||||||| |||| ||||| |||||||||||  | |||||| ||||| | |||| ||| |||||||||||| ||||||||| ||||||||||| |||| |    
T  24351002 tgtgaaaatcacttatttagattgaaagaaagggaaaaaaggatgcacaggggtgattctaggtcaaaaattgacctaaaatcacccctcctcgatgagt 24351101  T
Q  181 gaaggagaaagaaaactta 199  Q
    ||  ||| |||||||||||    
T  24351102 gagagaggaagaaaactta 24351120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 83 - 199
Target Start/End: Complemental strand, 35132883 - 35132765
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaaaa-gatgcatatgggtcattttaggtcaaaaat-gacctaaaaccacccctcctcaatgaat 180  Q
    |||||||| |||| ||||| ||| |||||||  ||||||| |||| | | |||| ||| |||||||||||| ||||||||| ||||||||||| |||| |    
T  35132883 tgtgaaaatcacttatttagattaaaagaaaggggaaaaaagatgtagaggggtgattctaggtcaaaaattgacctaaaatcacccctcctcgatgagt 35132784  T
Q  181 gaaggagaaagaaaactta 199  Q
    ||| ||| |||||||||||    
T  35132783 gaaagaggaagaaaactta 35132765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 199
Target Start/End: Original strand, 1749302 - 1749418
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaaaagatgcatatgggtcattttaggtcaaaaat-gacctaaaaccacccctcctcaatgaatg 181  Q
    |||||||| |||| ||||| |||||||||||  | ||||||||| |   |||| ||| |||||||||||| ||||||||| ||||||||||| |||| ||    
T  1749302 tgtgaaaatcacttatttagattgaaagaaagggaaaaaagatgaagc-gggtgattctaggtcaaaaattgacctaaaatcacccctcctcgatgagtg 1749400  T
Q  182 aaggagaaagaaaactta 199  Q
    || ||| |||||||||||    
T  1749401 aaagaggaagaaaactta 1749418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 194
Target Start/End: Original strand, 12141465 - 12141580
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaata---ggaaaaagatgcatatgggtcattttaggtc-aaaaatgacctaaaaccacccctcctcaatga 178  Q
    ||||||||||||| ||||| ||||||| ||| |   | ||||||||| | | |||| ||| || ||| |||||||||||||||||||||||| || ||||    
T  12141465 tgtgaaaaccacttatttagattgaaataaaaaagggaaaaaagatgtagaggggtgattctatgtcaaaaaatgacctaaaaccacccctcttcgatga 12141564  T
Q  179 atgaaggagaaagaaa 194  Q
    | ||||||||||||||    
T  12141565 acgaaggagaaagaaa 12141580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 195
Target Start/End: Original strand, 13797094 - 13797204
Alignment:
Q  87 aaaaccactcatttaaattgaaagaaatagg-aaaaagatgcatatgggtcattttaggtcaaaa-atgacctaaaaccacccctcctcaatgaatgaag 184  Q
    |||| |||| |||||||||||||||||  || ||||||||| | | |||| ||| ||||| |||| |||||||||||||| || ||||| ||||| |||     
T  13797094 aaaatcacttatttaaattgaaagaaaaggggaaaaagatgtagaggggtgattctaggttaaaaaatgacctaaaaccatccatcctcgatgaacgaac 13797193  T
Q  185 gagaaagaaaa 195  Q
    |||||||||||    
T  13797194 gagaaagaaaa 13797204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 195
Target Start/End: Complemental strand, 19296774 - 19296696
Alignment:
Q  118 aaaaagatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaatgaaggagaaagaaaa 195  Q
    ||||||||| | | |||| ||| ||||||||||| |||||||||||||||||||||| ||||| |||||| ||| ||||    
T  19296774 aaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggacaaaaaaaa 19296696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 48061356 - 48061241
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg---aaaaagatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatga 178  Q
    ||||||||||||| ||||| ||||||||||| |||   ||||| ||| |   |||| ||| || |||||||| ||||||||||||||| |||||| ||||    
T  48061356 tgtgaaaaccacttatttagattgaaagaaaaaggggaaaaaatatgtagtggggtgattctaagtcaaaaaatgacctaaaaccacctctcctcgatga 48061257  T
Q  179 atgaaggagaaagaaa 194  Q
    | |||||| |||||||    
T  48061256 acgaaggataaagaaa 48061241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 165
Target Start/End: Original strand, 34899765 - 34899850
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg--aaaaagatgcatatgggtcattttaggtc-aaaaatgacctaaaaccac 165  Q
    ||||||||||||| ||||| |||||||||||  ||  ||||||||| | | |||| ||| |||||| |||||||||||||||||||    
T  34899765 tgtgaaaaccacttatttagattgaaagaaaagggaaaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccac 34899850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 189
Target Start/End: Original strand, 44311955 - 44312060
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaaaagatgcatatgggtcattttaggtcaaaaatgacctaaaaccacccctcctcaatgaatga 182  Q
    |||| |||||||| ||||| ||||||||||| || ||||||| |   | || | ||| ||||||||||||||| |||||| | ||||||||||||| |||    
T  44311955 tgtggaaaccacttatttagattgaaagaaagagaaaaaagacgtgaa-ggatgattataggtcaaaaatgacttaaaactatccctcctcaatgagtga 44312053  T
Q  183 aggagaa 189  Q
    || ||||    
T  44312054 agaagaa 44312060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 199
Target Start/End: Complemental strand, 3106330 - 3106285
Alignment:
Q  154 acctaaaaccacccctcctcaatgaatgaaggagaaagaaaactta 199  Q
    |||||| ||||||||| ||| || ||||||||||||||||||||||    
T  3106330 acctaataccaccccttctcgataaatgaaggagaaagaaaactta 3106285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 4529945 - 4529876
Alignment:
Q  147 aaaaatgacctaaaaccacccctcctcaatgaatgaaggagaaagaaaacttataaagaaagtggagttt 216  Q
    ||||||||||||||| |||| ||| |  ||||||||||||||||||| ||||| | |||| ||| |||||    
T  4529945 aaaaatgacctaaaatcacctctctttgatgaatgaaggagaaagaagacttagagagaaggtgaagttt 4529876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 8013660 - 8013737
Alignment:
Q  118 aaaaagatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaatgaaggagaaagaaa 194  Q
    ||||||||| | | |||| ||| ||||||||||| ||| |||||||||||||||||| |||||  ||| |||||||||    
T  8013660 aaaaagatgtagaggggtgattctaggtcaaaaaatgatctaaaaccacccctcctcgatgaacaaagaagaaagaaa 8013737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 24770187 - 24770074
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaat-aggaaaaagatgcatatgggtcattttaggtca-aaaatgacctaaaaccacccctcctcaatgaat 180  Q
    ||||||||||||| ||||| |||||||||||  |  ||||||||| | |||| | ||| || |||| |||||||||||||| ||||||  ||| |||||     
T  24770187 tgtgaaaaccacttatttagattgaaagaaaagaaaaaaaagatgtagatggatgattctaagtcataaaatgacctaaaatcaccccgtctcgatgaac 24770088  T
Q  181 gaaggagaaagaaa 194  Q
    ||| ||||||||||    
T  24770087 gaatgagaaagaaa 24770074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 199
Target Start/End: Original strand, 5078590 - 5078670
Alignment:
Q  120 aaagatgcatatgggtcattttaggtcaaaa-atgacctaaaaccacccctcctcaatgaatgaaggagaaagaaaactta 199  Q
    ||||||||| | |||| ||| |||||||||| ||||||||||| ||||| |||| ||||| |||| || ||||| ||||||    
T  5078590 aaagatgcagaggggtgattctaggtcaaaaaatgacctaaaatcacccttccttaatgagtgaaagataaagagaactta 5078670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 216
Target Start/End: Original strand, 10021282 - 10021350
Alignment:
Q  148 aaaatgacctaaaaccacccctcctcaatgaatgaaggagaaagaaaacttataaagaaagtggagttt 216  Q
    |||||||| ||||| || |||||||  |||||||||||| |||||||||||| | | ||||| ||||||    
T  10021282 aaaatgacataaaatcatccctcctagatgaatgaaggaaaaagaaaacttagagaaaaagtagagttt 10021350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 198
Target Start/End: Complemental strand, 11343726 - 11343615
Alignment:
Q  87 aaaaccactcatttaaattgaaagaaataggaaaaagatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaatgaagg 185  Q
    |||| |||| ||||| |||||||||||| | ||||| ||||| | |||| ||| ||||||||||| | | |||||| ||||||| ||| ||||  ||| |    
T  11343726 aaaatcacttatttagattgaaagaaatggaaaaaaaatgca-aggggtgattctaggtcaaaaaataaactaaaatcaccccttctcgatgagcgaaag 11343628  T
Q  186 agaaagaaaactt 198  Q
    |||||||||||||    
T  11343627 agaaagaaaactt 11343615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 6e-21; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 83 - 194
Target Start/End: Original strand, 31013727 - 31013841
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg--aaaaagatgcatatgggtcattttaggtcaaaa-atgacctaaaaccacccctcctcaatgaa 179  Q
    ||||||||||||| ||||| |||||||||||  ||  ||||||||| | | |||| ||| |||||||||| ||||||||||||||||||||||| |||||    
T  31013727 tgtgaaaaccacttatttagattgaaagaaaagggggaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaa 31013826  T
Q  180 tgaaggagaaagaaa 194  Q
     ||||||||||||||    
T  31013827 cgaaggagaaagaaa 31013841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 97 - 194
Target Start/End: Original strand, 17693784 - 17693883
Alignment:
Q  97 atttaaattgaaagaaat--aggaaaaagatgcatatgggtcattttaggtcaaaaatgacctaaaaccacccctcctcaatgaatgaaggagaaagaaa 194  Q
    ||||| ||||||||||||  || ||||||||| | | || | ||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  17693784 atttagattgaaagaaattgagaaaaaagatgtagagggatgattctaggtcaaaaatgacctaaaacaacccctcctcaatgaacgaaggagaaagaaa 17693883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 92 - 216
Target Start/End: Complemental strand, 8981121 - 8980994
Alignment:
Q  92 cactcatttaaattgaaagaaataggaaaaa--gatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaatgaaggaga 188  Q
    |||| ||||| |||||||||||  || ||||  |||||||| |||| ||||||||||||||| |||||||||||||||||||||| | || |||| ||||    
T  8981121 cacttatttagattgaaagaaaaggggaaaaaggatgcataggggtgattttaggtcaaaaaatgacctaaaaccacccctcctcgacgagtgaatgaga 8981022  T
Q  189 aagaaaacttataaagaaagtggagttt 216  Q
    | ||||||||| | ||||  ||||||||    
T  8981021 acgaaaacttagagagaagttggagttt 8980994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 85 - 216
Target Start/End: Complemental strand, 29938045 - 29937912
Alignment:
Q  85 tgaaaaccactcatttaaattgaaagaaatagg---aaaaagatgcatatgggtcattttaggtcaaaaatgacctaaaaccacccctcctcaatgaatg 181  Q
    ||||||||||| |||||  |||||||||| |||   ||||||||| | | |||| ||| |||||||||||||| |||||||||||| ||||||||||| |    
T  29938045 tgaaaaccacttatttaggttgaaagaaa-aggcgaaaaaagatgtagaggggtgattctaggtcaaaaatgatctaaaaccacccatcctcaatgaacg 29937947  T
Q  182 aaggagaaagaaaacttataaagaaagtggagttt 216  Q
    ||| |||||||||  ||| | ||||| ||||||||    
T  29937946 aagtagaaagaaagtttaaagagaaattggagttt 29937912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 120 - 183
Target Start/End: Original strand, 14916332 - 14916395
Alignment:
Q  120 aaagatgcatatgggtcattttaggtcaaaaatgacctaaaaccacccctcctcaatgaatgaa 183  Q
    ||||||||| |||||| ||| ||||||||||||||||||||||||||||||||| | |||||||    
T  14916332 aaagatgcagatgggtgattctaggtcaaaaatgacctaaaaccacccctcctcgaagaatgaa 14916395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 118 - 216
Target Start/End: Complemental strand, 15344202 - 15344103
Alignment:
Q  118 aaaaagatgcatatgggtcattttaggtcaaa-aatgacctaaaaccacccctcctcaatgaatgaaggagaaagaaaacttataaagaaagtggagttt 216  Q
    ||||||||||| | |||| ||||||||||||| |||||||||||||||||||||||| |||| |||| |||||  |||||||| | ||||  ||||||||    
T  15344202 aaaaagatgcagaggggtaattttaggtcaaagaatgacctaaaaccacccctcctcgatgagtgaaagagaagaaaaacttagagagaagttggagttt 15344103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 118 - 216
Target Start/End: Complemental strand, 15433267 - 15433168
Alignment:
Q  118 aaaaagatgcatatgggtcattttaggtcaaa-aatgacctaaaaccacccctcctcaatgaatgaaggagaaagaaaacttataaagaaagtggagttt 216  Q
    ||||||||||| | |||| ||||||||||||| |||||||||||||||||||||||| |||| |||| |||||  |||||||| | ||||  ||||||||    
T  15433267 aaaaagatgcagaggggtaattttaggtcaaagaatgacctaaaaccacccctcctcgatgagtgaaagagaagaaaaacttagagagaagttggagttt 15433168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 118 - 216
Target Start/End: Complemental strand, 15524571 - 15524472
Alignment:
Q  118 aaaaagatgcatatgggtcattttaggtcaaa-aatgacctaaaaccacccctcctcaatgaatgaaggagaaagaaaacttataaagaaagtggagttt 216  Q
    ||||||||||| | |||| ||||||||||||| |||||||||||||||||||||||| |||| |||| |||||  |||||||| | ||||  ||||||||    
T  15524571 aaaaagatgcagaggggtaattttaggtcaaagaatgacctaaaaccacccctcctcgatgagtgaaagagaagaaaaacttagagagaagttggagttt 15524472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 118 - 199
Target Start/End: Original strand, 1236886 - 1236968
Alignment:
Q  118 aaaaagatgcatatgggtcattttaggtcaaa-aatgacctaaaaccacccctcctcaatgaatgaaggagaaagaaaactta 199  Q
    ||||||||||| | || | ||||||||||||| |||||||||||||||||||||||||||||  ||| ||||| |||||||||    
T  1236886 aaaaagatgcagagggattattttaggtcaaagaatgacctaaaaccacccctcctcaatgagcgaaagagaaggaaaactta 1236968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 7677503 - 7677573
Alignment:
Q  147 aaaaatgacctaaaaccacccctcctcaatgaatgaaggagaaagaaaacttataaagaaagtggagttta 217  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||| ||| | ||||| | |||||||    
T  7677503 aaaaatgacctaaaaccacccctcctcaatgaacgaagaagaaagaaaatttagagagaaattagagttta 7677573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 33347590 - 33347644
Alignment:
Q  1 tcaaacgccacacaagacgacgaaacacaatgccgtacccaagcgacgaaatcac 55  Q
    ||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||    
T  33347590 tcaaacgccacacaagacgacaaaacacaatcccgtacccaagcaacgaaatcac 33347644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 78 - 194
Target Start/End: Complemental strand, 3673382 - 3673265
Alignment:
Q  78 ttatgtgtgaaaaccactcatttaaattgaaagaaatagga-aaaagatgcatatgggtcattttaggtcaaaaatgacctaaaaccacccctcctcaat 176  Q
    |||| ||||| ||||||| ||||| |||||||||||  ||  |||||||| | | || | ||| |||||||||||||||||||||||| ||||| || ||    
T  3673382 ttatatgtgataaccacttatttagattgaaagaaaaggggcaaaagatgtagagggatgattctaggtcaaaaatgacctaaaaccaaccctcttcgat 3673283  T
Q  177 gaatgaaggagaaagaaa 194  Q
    |||| |||||||||||||    
T  3673282 gaataaaggagaaagaaa 3673265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 206
Target Start/End: Original strand, 18890862 - 18890987
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaaaa-gatgcatatgggtcattttaggtcaaaaat-gacctaaaaccacccctcctcaatgaat 180  Q
    |||||||| |||| ||||| |||||||||||  ||||||| |||||| ||| || ||| |||||||||||| ||||||||| ||||||| ||| || | |    
T  18890862 tgtgaaaatcacttatttagattgaaagaaaggggaaaaaagatgcagatgagtgattctaggtcaaaaattgacctaaaatcaccccttctcgataagt 18890961  T
Q  181 gaaggagaaagaaaacttataaagaa 206  Q
    ||| ||| ||||||||||| ||||||    
T  18890962 gaaagaggaagaaaacttaaaaagaa 18890987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 194
Target Start/End: Original strand, 25191223 - 25191336
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaaaa-gatgcatatgggtcattttaggtcaaaa-atgacctaaaaccacccctcctcaatgaat 180  Q
    |||||||| |||| |||||| ||||||||||  ||||||| |||| | |||||| ||| |||||||||| ||||||||||| |||| |||||| |||||     
T  25191223 tgtgaaaatcacttatttaatttgaaagaaaagggaaaaaagatgtagatgggtgattctaggtcaaaaaatgacctaaaatcacctctcctcgatgaac 25191322  T
Q  181 gaaggagaaagaaa 194  Q
     |||||||||||||    
T  25191323 aaaggagaaagaaa 25191336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 83 - 206
Target Start/End: Original strand, 7883396 - 7883522
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaat-agg--aaaaagatgcatatgggtcattttaggtcaaaaatgacctaaaaccacccctcctcaatgaa 179  Q
    ||||||||||||| ||||| |||||||||||  |||  ||||||||| | | |||| ||| ||| ||||||||||||||||||||| | || || |||||    
T  7883396 tgtgaaaaccacttatttagattgaaagaaaagagggaaaaaagatgtagaggggtgattatagatcaaaaatgacctaaaaccactcatcatcgatgaa 7883495  T
Q  180 tgaaggagaaagaaaacttataaagaa 206  Q
     ||| ||||||||||| ||| ||||||    
T  7883496 cgaatgagaaagaaaatttagaaagaa 7883522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 147 - 194
Target Start/End: Complemental strand, 10377563 - 10377516
Alignment:
Q  147 aaaaatgacctaaaaccacccctcctcaatgaatgaaggagaaagaaa 194  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  10377563 aaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaa 10377516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 85 - 194
Target Start/End: Complemental strand, 23230575 - 23230463
Alignment:
Q  85 tgaaaaccactcatttaaattgaaagaaatagg---aaaaagatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaat 180  Q
    ||||||||||| ||||| ||||||||||| |||   ||||||||| | | |||| ||||| ||||||||| |||||||||| ||||| ||||| |||||     
T  23230575 tgaaaaccacttatttagattgaaagaaaaaggggaaaaaagatgtagaggggtgatttttggtcaaaaattgacctaaaa-cacccatcctcgatgaac 23230477  T
Q  181 gaaggagaaagaaa 194  Q
    ||||||||||||||    
T  23230476 gaaggagaaagaaa 23230463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 83 - 194
Target Start/End: Original strand, 27110620 - 27110734
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg--aaaaagatgcatatgggtcattttaggtcaaaa-atgacctaaaaccacccctcctcaatgaa 179  Q
    |||||| |||||| ||||| |||||||||||   |  ||||||||| | ||| || ||||||| |||||| ||||||||||||||||| || || |||||    
T  27110620 tgtgaagaccacttatttagattgaaagaaaagagtaaaaaagatgtagatgtgtgattttagatcaaaaaatgacctaaaaccacccatcttcgatgaa 27110719  T
Q  180 tgaaggagaaagaaa 194  Q
    |||||||||||||||    
T  27110720 tgaaggagaaagaaa 27110734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 33214791 - 33214901
Alignment:
Q  86 gaaaaccactcatttaaattgaaagaaataggaaaaagatgcatatgggtcattttaggtc--aaaaatgacctaaaaccacccctcctcaatgaatgaa 183  Q
    ||||| |||| |||||||||||||||||  ||||||||||| | |||  | ||| || |||  ||||| ||||||||||||||| ||||| ||||| |||    
T  33214791 gaaaatcacttatttaaattgaaagaaaagggaaaaagatgtagatgaatgattctaagtcaaaaaaaagacctaaaaccacccatcctcgatgaacgaa 33214890  T
Q  184 ggagaaagaaa 194  Q
    |||||||||||    
T  33214891 ggagaaagaaa 33214901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 79 - 166
Target Start/End: Complemental strand, 5046686 - 5046597
Alignment:
Q  79 tatgtgtgaaaaccactcatttaaattgaaagaaataggaaaaagatgcatatgggtcattttaggt--caaaaatgacctaaaaccacc 166  Q
    |||||||||||| |||| ||||||||| |||||||  ||||||||||||||| |||  ||| |||||   ||||||||||||||||||||    
T  5046686 tatgtgtgaaaatcacttatttaaattaaaagaaaggggaaaaagatgcataggggcgattctaggtaaaaaaaatgacctaaaaccacc 5046597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 83 - 196
Target Start/End: Original strand, 24099419 - 24099532
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaa-aagatgcatatgggtcattttaggtcaaaaatgacctaaaaccacccctcctcaatgaatg 181  Q
    |||| ||| |||| |||||||| |||||||| |||||| || ||||| | |||| ||| |||||||||||||||||||| ||| |||| ||| |||| ||    
T  24099419 tgtggaaatcacttatttaaatcgaaagaaagaggaaacaaaatgcagaggggtgattctaggtcaaaaatgacctaaagcca-ccctactcgatgattg 24099517  T
Q  182 aaggagaaagaaaac 196  Q
    || ||||||||||||    
T  24099518 aaagagaaagaaaac 24099532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 189
Target Start/End: Complemental strand, 28897642 - 28897535
Alignment:
Q  85 tgaaaaccactcatttaaattgaaagaaat-aggaaaaa-gatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaatg 181  Q
    ||||||||||| ||||| |||||||||||  |||||||| |||| | | |||| ||||||| ||||||| |||| ||||||||||||||||| | |||||    
T  28897642 tgaaaaccacttatttagattgaaagaaaagaggaaaaaagatgtagaggggtgattttagatcaaaaaatgacttaaaaccacccctcctcgacgaatg 28897543  T
Q  182 aaggagaa 189  Q
    ||| ||||    
T  28897542 aagaagaa 28897535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 216
Target Start/End: Complemental strand, 37971225 - 37971092
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg--aaaaagatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaa 179  Q
    |||||||| |||| ||||| |||||||||||  ||  ||||||||| | | |||| ||| ||||||||||| |||||||||||||   |||||| |||||    
T  37971225 tgtgaaaatcacttatttagattgaaagaaaaggggaaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaacca---ctcctcgatgaa 37971129  T
Q  180 tgaaggagaaagaaaacttataaagaaagtggagttt 216  Q
    ||||| |||||||||| ||| | ||||  ||||||||    
T  37971128 tgaagaagaaagaaaatttagagagaagttggagttt 37971092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 199
Target Start/End: Original strand, 1239596 - 1239678
Alignment:
Q  118 aaaaagatgcatatgggtcattttaggtcaaa-aatgacctaaaaccacccctcctcaatgaatgaaggagaaagaaaactta 199  Q
    ||||||||||| | |||| ||||||||||||| || ||||||||||||||||||||| ||||  | | ||||| |||||||||    
T  1239596 aaaaagatgcagaggggtgattttaggtcaaagaaggacctaaaaccacccctcctcgatgagcggaagagaaggaaaactta 1239678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 212
Target Start/End: Original strand, 8443744 - 8443808
Alignment:
Q  147 aaaaatgacctaaaaccacccctcctcaatgaatgaaggagaaagaaaacttataaagaaagtgga 212  Q
    ||||||||||||||||||||||| ||  ||||||||| ||||||||||| ||| ||||||| ||||    
T  8443744 aaaaatgacctaaaaccacccct-cttgatgaatgaaagagaaagaaaatttaaaaagaaattgga 8443808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 190
Target Start/End: Original strand, 14545058 - 14545169
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaaaa--gatgcatat-gggtcattttaggtcaaaa-atgacctaaaaccacccctcctcaatga 178  Q
    ||||||||||||| ||||| |||||||||||   ||||||  |||| | |  |||| |||||||||||||| ||||||||||||||| | |||| || ||    
T  14545058 tgtgaaaaccacttatttagattgaaagaaaagagaaaaaaagatgtagagagggtgattttaggtcaaaaaatgacctaaaaccactcatccttaacga 14545157  T
Q  179 atgaaggagaaa 190  Q
    ||||||||||||    
T  14545158 atgaaggagaaa 14545169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 190
Target Start/End: Original strand, 20559902 - 20560010
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaaaagatgcatatgggtcattttaggtc-aaaaatgacctaaaaccacccctcctcaatgaatg 181  Q
    |||||||| |||| ||||| |||||||||||  || |||| ||| | | |||| ||| |||||| |||||||| ||||||||||||||| || ||||| |    
T  20559902 tgtgaaaatcacttatttagattgaaagaaaaggggaaaaaatgtagaggggtgattctaggtccaaaaatgatctaaaaccacccctcatcgatgaacg 20560001  T
Q  182 aaggagaaa 190  Q
    ||| |||||    
T  20560002 aagaagaaa 20560010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 190
Target Start/End: Original strand, 20571464 - 20571572
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaaaagatgcatatgggtcattttaggtc-aaaaatgacctaaaaccacccctcctcaatgaatg 181  Q
    |||||||| |||| ||||| |||||||||||  || |||| ||| | | |||| ||| |||||| |||||||| ||||||||||||||| || ||||| |    
T  20571464 tgtgaaaatcacttatttagattgaaagaaaaggggaaaaaatgtagaggggtgattctaggtccaaaaatgatctaaaaccacccctcatcgatgaacg 20571563  T
Q  182 aaggagaaa 190  Q
    ||| |||||    
T  20571564 aagaagaaa 20571572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 194
Target Start/End: Original strand, 8412572 - 8412619
Alignment:
Q  147 aaaaatgacctaaaaccacccctcctcaatgaatgaaggagaaagaaa 194  Q
    ||||||||||||||||||||||| ||| ||||| ||| ||||||||||    
T  8412572 aaaaatgacctaaaaccacccctactcgatgaacgaatgagaaagaaa 8412619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 216
Target Start/End: Original strand, 40211461 - 40211598
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg--aaaaagatgcatatgggtcattttaggtcaaaaa--tgacctaaaaccacccctcctcaatga 178  Q
    |||||||||| || ||||| |||||||||||   |  ||||||||| | | |||| ||| |||||||||||  | ||||||| |||||||||||| || |    
T  40211461 tgtgaaaaccgcttatttagattgaaagaaaagagtaaaaaagatgtagaggggtgattctaggtcaaaaaaattacctaaagccacccctcctcgatta 40211560  T
Q  179 atgaaggagaaagaaaacttataaagaaagtggagttt 216  Q
    | ||||||||||||||  ||| | ||||| ||||||||    
T  40211561 acgaaggagaaagaaattttaaagagaaattggagttt 40211598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 189
Target Start/End: Original strand, 20227442 - 20227547
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaaaagatgcatatgggtcattttaggtcaaaaatgacctaaaaccacccctcctcaatgaatga 182  Q
    |||| |||||||| ||||| ||||||||||| || ||||||| |   | || | ||| ||||||||||||||| |||||| | ||||||||||||| |||    
T  20227442 tgtggaaaccacttatttagattgaaagaaagagaaaaaagacgtgaa-ggatgattataggtcaaaaatgacttaaaactatccctcctcaatgagtga 20227540  T
Q  183 aggagaa 189  Q
    || ||||    
T  20227541 agaagaa 20227547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 41896443 - 41896344
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaaaagatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaatg 181  Q
    |||||||| |||| ||||| ||||||||||  ||| |||| ||||| |||||| ||| ||||||||||| |||||||||| ||| | ||||| |||| ||    
T  41896443 tgtgaaaatcacttatttagattgaaagaa--agggaaaaaatgcaaatgggtgattctaggtcaaaaattgacctaaaatcactcatcctcgatgagtg 41896346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 199
Target Start/End: Original strand, 27498565 - 27498610
Alignment:
Q  154 acctaaaaccacccctcctcaatgaatgaaggagaaagaaaactta 199  Q
    |||||||||| |||||| || |||||||||||||||||||| ||||    
T  27498565 acctaaaaccgcccctcatcgatgaatgaaggagaaagaaagctta 27498610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 198
Target Start/End: Original strand, 40619288 - 40619345
Alignment:
Q  141 taggtcaaaaatgacctaaaaccacccctcctcaatgaatgaaggagaaagaaaactt 198  Q
    ||||||||||||||||||||  || || || || |||||| |||||||||||||||||    
T  40619288 taggtcaaaaatgacctaaattcatccatcttcgatgaataaaggagaaagaaaactt 40619345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 199
Target Start/End: Complemental strand, 3240241 - 3240189
Alignment:
Q  147 aaaaatgacctaaaaccacccctcctcaatgaatgaaggagaaagaaaactta 199  Q
    ||||||||||||||| ||||||||||||| ||  | | |||||||||||||||    
T  3240241 aaaaatgacctaaaatcacccctcctcaacgaccggaagagaaagaaaactta 3240189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 190
Target Start/End: Original strand, 20553467 - 20553511
Alignment:
Q  146 caaaaatgacctaaaaccacccctcctcaatgaatgaaggagaaa 190  Q
    ||||||||| |||||||||||||||||| ||||| |||| |||||    
T  20553467 caaaaatgatctaaaaccacccctcctcgatgaacgaagaagaaa 20553511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 6e-21; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 12170427 - 12170313
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg--aaaaagatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaa 179  Q
    ||||||||||||| ||||| |||||||||||  ||  ||||||||| | | |||| ||| ||||||||||| |||||||||||||||||||||| |||||    
T  12170427 tgtgaaaaccacttatttagattgaaagaaaaggggaaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaa 12170328  T
Q  180 tgaaggagaaagaaa 194  Q
     ||||||||||||||    
T  12170327 cgaaggagaaagaaa 12170313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 194
Target Start/End: Original strand, 33053326 - 33053440
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg--aaaaagatgcatatgggtcattttaggtcaaaa-atgacctaaaaccacccctcctcaatgaa 179  Q
    ||||||||||||| ||||| |||||||||||  ||  ||||||||| | | || | ||| |||||||||| ||||||||||||||||||||||| |||||    
T  33053326 tgtgaaaaccacttatttagattgaaagaaaaggggaaaaaagatgtagagggatgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaa 33053425  T
Q  180 tgaaggagaaagaaa 194  Q
     ||||||||||||||    
T  33053426 cgaaggagaaagaaa 33053440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 195
Target Start/End: Original strand, 30608672 - 30608785
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatag-gaaaaagatgcatatgggtcattttaggtcaaaaatgacctaaaaccacccctcctcaatgaatg 181  Q
    ||||||||||||| ||||| |||||||||||  | |||||| ||| | | |||| ||| |||||||||||||||||||||||| || |||| |||| |||    
T  30608672 tgtgaaaaccactaatttagattgaaagaaaaggagaaaaatatgtagaggggtgattctaggtcaaaaatgacctaaaaccatccatccttaatggatg 30608771  T
Q  182 aaggagaaagaaaa 195  Q
    ||||||||| ||||    
T  30608772 aaggagaaaaaaaa 30608785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 23128550 - 23128436
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg--aaaaagatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaa 179  Q
    ||||||||||||| ||||| | |||||||||  ||  ||||||||| | | |||| ||| ||||||||||| ||||||||||| | ||||||||||||||    
T  23128550 tgtgaaaaccacttatttagaatgaaagaaaatggggaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaactatccctcctcaatgaa 23128451  T
Q  180 tgaaggagaaagaaa 194  Q
     ||||||||||||||    
T  23128450 cgaaggagaaagaaa 23128436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 82 - 199
Target Start/End: Original strand, 4010659 - 4010777
Alignment:
Q  82 gtgtgaaaaccactcatttaaattgaaagaaataggaaaaagatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaat 180  Q
    |||||||||||| | ||||||||||||||||||   |||||||  || | |||| ||| ||||||||||| ||| |||||  ||| |||||||||| |||    
T  4010659 gtgtgaaaaccatttatttaaattgaaagaaatgaaaaaaagacacagaggggtgattctaggtcaaaaaatgatctaaagtcactcctcctcaataaat 4010758  T
Q  181 gaaggagaaagaaaactta 199  Q
     ||||||||||||||||||    
T  4010759 aaaggagaaagaaaactta 4010777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 194
Target Start/End: Original strand, 68159 - 68272
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg-aaaaagatgcatatggg-tcattttaggtcaaaaatgacctaaaaccacccctcctcaatgaat 180  Q
    ||||||||||||| ||||| ||| |||||||  || ||||||||| | | ||| | ||| |||||||||||| ||||||||||| |||||||| |||||     
T  68159 tgtgaaaaccacttatttagattaaaagaaaaggggaaaaagatgtagagggggtgattctaggtcaaaaattacctaaaaccatccctcctcgatgaac 68258  T
Q  181 gaaggagaaagaaa 194  Q
    ||||||||||||||    
T  68259 gaaggagaaagaaa 68272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 199
Target Start/End: Original strand, 32191925 - 32192009
Alignment:
Q  116 ggaaaaagatgcatatgggtcattttaggtcaaaaatg-acctaaaaccacccctcctcaatgaatgaaggagaaagaaaactta 199  Q
    ||||||||||||| | |||| ||| ||| ||||||| | |||||||||||||||||||  ||||||||| |||||||||||||||    
T  32191925 ggaaaaagatgcagaagggtgattgtagatcaaaaaaggacctaaaaccacccctccttgatgaatgaaagagaaagaaaactta 32192009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 606136 - 606022
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg--aaaaagatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaa 179  Q
    ||||||||||||| ||||| |||||||||||  ||  ||||||||| | | |||| ||  ||||||||||| |||| ||||| ||||||||||| |||||    
T  606136 tgtgaaaaccacttatttagattgaaagaaaaggggaaaaaagatgtagaggggtgatcctaggtcaaaaaatgacataaaatcacccctcctcgatgaa 606037  T
Q  180 tgaaggagaaagaaa 194  Q
     ||||||||||||||    
T  606036 cgaaggagaaagaaa 606022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 83 - 193
Target Start/End: Complemental strand, 32059839 - 32059728
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaaaagatgcatatgggtcattttaggtcaaa-aatgacctaaaaccacccctcctcaatgaatg 181  Q
    ||||||||| ||| ||||| |||||||||||  ||||||||||| | | || | ||| ||||||||| |||||| ||||||||||  ||||| |||||||    
T  32059839 tgtgaaaactacttatttagattgaaagaaaagggaaaaagatgtagaaggatgattctaggtcaaacaatgacttaaaaccacctatcctcgatgaatg 32059740  T
Q  182 aaggagaaagaa 193  Q
    || |||||||||    
T  32059739 aaagagaaagaa 32059728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 34018492 - 34018378
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg--aaaaagatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaa 179  Q
    ||||||||||||| |||||||||||||||||  ||  ||| ||||| | | |||| ||| ||||||||||| ||||||||||||  || ||||| |||||    
T  34018492 tgtgaaaaccacttatttaaattgaaagaaaatgggtaaagagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccttccatcctcgatgaa 34018393  T
Q  180 tgaaggagaaagaaa 194  Q
     ||||||||||||||    
T  34018392 cgaaggagaaagaaa 34018378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 83 - 194
Target Start/End: Original strand, 3913732 - 3913845
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaaga-aatagg-aaaaagatgcatatgggtcattttaggtc-aaaaatgacctaaaaccacccctcctcaatgaa 179  Q
    ||||||||||||| ||||| ||||||||| ||| || ||||||||||  | |||| ||| |||||| |||||||||||||||||| |||||||| |||||    
T  3913732 tgtgaaaaccacttatttagattgaaagagaatgggaaaaaagatgcggaggggtgattctaggtcaaaaaatgacctaaaacca-ccctcctcgatgaa 3913830  T
Q  180 tgaaggagaaagaaa 194  Q
      |||||||||||||    
T  3913831 caaaggagaaagaaa 3913845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 199
Target Start/End: Original strand, 7976360 - 7976441
Alignment:
Q  118 aaaaagatgcatatgggtcattttaggtcaaaaatgacctaaaaccacccctcctcaatgaatgaaggagaaagaaaactta 199  Q
    ||||| ||||| ||| || ||| ||||||||||||||||||||||||||| | ||| |||| ||||  ||||||||||||||    
T  7976360 aaaaaaatgcagatgagtgattctaggtcaaaaatgacctaaaaccacccatgctcgatgagtgaaaaagaaagaaaactta 7976441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 80 - 195
Target Start/End: Complemental strand, 20220842 - 20220726
Alignment:
Q  80 atgtgtgaaaaccactcatttaaattgaaagaaataggaaaaagatgcatatgggtcattttaggtc-aaaaatgacctaaaaccacccctcctcaatga 178  Q
    |||||||||| ||||| |||||||| ||||||||  ||||||||||||| |||||| |||  |  || ||||||||| ||||| || ||  |||||||||    
T  20220842 atgtgtgaaagccacttatttaaatcgaaagaaaggggaaaaagatgcagatgggtgattccatatcaaaaaatgacataaaatcatccaccctcaatga 20220743  T
Q  179 atgaaggagaaagaaaa 195  Q
    ||||| |||| ||||||    
T  20220742 atgaaagagatagaaaa 20220726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 80 - 195
Target Start/End: Complemental strand, 22114826 - 22114710
Alignment:
Q  80 atgtgtgaaaaccactcatttaaattgaaagaaataggaaaaagatgcatatgggtcattttaggtc-aaaaatgacctaaaaccacccctcctcaatga 178  Q
    |||||||||| ||||| |||||||| ||||||||  ||||||||||||| |||||| |||  |  || ||||||||| ||||| || ||  |||||||||    
T  22114826 atgtgtgaaagccacttatttaaatcgaaagaaaggggaaaaagatgcagatgggtgattccatatcaaaaaatgacataaaatcatccaccctcaatga 22114727  T
Q  179 atgaaggagaaagaaaa 195  Q
    ||||| |||| ||||||    
T  22114726 atgaaagagatagaaaa 22114710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 199
Target Start/End: Complemental strand, 545941 - 545838
Alignment:
Q  97 atttaaattgaaagaaataggaaaaa-gatgcatatgggtcattttaggtcaaaaatgacctaaaaccacccctcctcaatgaatgaaggagaaagaaaa 195  Q
    ||||| |||||||||||  ||||||| |||| | | | || ||| ||||||||||||| ||||||| ||||||||||| |||| |||| ||| |||||||    
T  545941 atttagattgaaagaaaggggaaaaaagatgtagaagagtgattctaggtcaaaaatggcctaaaatcacccctcctcgatgagtgaaagaggaagaaaa 545842  T
Q  196 ctta 199  Q
    ||||    
T  545841 ctta 545838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 190
Target Start/End: Complemental strand, 30894568 - 30894458
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaaaa--gatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaa 179  Q
    ||||||||||| | ||||| |||||||||||  |||||||  |||| | | |||| ||| ||||||||||| ||| |||||||||||||||||| || ||    
T  30894568 tgtgaaaaccagttatttagattgaaagaaaagggaaaaacagatgtagaggggtgattctaggtcaaaaaatgatctaaaaccacccctcctcgattaa 30894469  T
Q  180 tgaaggagaaa 190  Q
     ||||||||||    
T  30894468 cgaaggagaaa 30894458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 194
Target Start/End: Original strand, 32328792 - 32328855
Alignment:
Q  132 gggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaatgaaggagaaagaaa 194  Q
    |||| ||| ||||||||||| |||| ||||||||||||||||| ||||| ||||||||||||||    
T  32328792 gggtgattataggtcaaaaactgacttaaaaccacccctcctcgatgaacgaaggagaaagaaa 32328855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 29320057 - 29320134
Alignment:
Q  118 aaaaagatgcatatgggtcattttaggtcaaaa-atgacctaaaaccacccctcctcaatgaatgaaggagaaagaaa 194  Q
    ||||||||| | | |||| ||| ||| |||||| ||||||||||||||||| ||||| ||||| ||||||||||||||    
T  29320057 aaaaagatgtagaggggtgattctagatcaaaatatgacctaaaaccacccatcctcgatgaacgaaggagaaagaaa 29320134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 190
Target Start/End: Complemental strand, 127576 - 127499
Alignment:
Q  111 aaataggaaaaagatgcatatgggtcattttaggtcaaaaatgacctaaaaccacccctcctcaatgaatgaaggagaaa 190  Q
    |||| ||||||||||| | | |||| ||||||| |||||||| ||||||||||| |||||||||||||| ||| ||||||    
T  127576 aaatgggaaaaagatgtagaggggtgattttagatcaaaaat-acctaaaacca-ccctcctcaatgaacgaaagagaaa 127499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 216
Target Start/End: Original strand, 27097835 - 27097904
Alignment:
Q  147 aaaaatgacctaaaaccacccctcctcaatgaatgaaggagaaagaaaacttataaagaaagtggagttt 216  Q
    ||||| ||||||||||||| | |||| ||||| |||| ||||||||||||||| | |||| ||| |||||    
T  27097835 aaaaaagacctaaaaccactcttcctgaatgagtgaaagagaaagaaaacttagagagaatgtgaagttt 27097904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 7876166 - 7876253
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaaaagatgcatatgggtcattttaggtcaa-aaatgacctaaaaccacccctc 170  Q
    |||||||| |||| ||||| ||||||| ||| || ||||||||| | |||||| |||||||||||| || ||| | |||||||||||||    
T  7876166 tgtgaaaatcacttatttagattgaaataaagag-aaaaagatgaagatgggtgattttaggtcaataattgatccaaaaccacccctc 7876253  T

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Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 14801700 - 14801632
Alignment:
Q  132 gggtcattttaggtcaaaaat-gacctaaaaccacccctcctcaatgaatgaaggagaaagaaaactta 199  Q
    |||| ||| |||||||||||| ||||||||| ||||||| ||| |||| |||| ||| |||||||||||    
T  14801700 gggttattctaggtcaaaaattgacctaaaatcaccccttctcgatgagtgaaagaggaagaaaactta 14801632  T

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Target: scaffold0088 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 83 - 216
Target Start/End: Complemental strand, 50717 - 50581
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg--aaaaagatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaa 179  Q
    ||||||||||||| ||||| |||||||||||  ||  ||||||||| | | || | ||| ||||||||||| |||||||||| |||||||||||||||||    
T  50717 tgtgaaaaccacttatttagattgaaagaaaaggggaaaaaagatgtagagggatgattctaggtcaaaaagtgacctaaaatcacccctcctcaatgaa 50618  T
Q  180 tgaaggagaaagaaaacttataaagaaagtggagttt 216  Q
     ||||||||||||||  ||| ||||||  ||||||||    
T  50617 cgaaggagaaagaaagtttagaaagaagttggagttt 50581  T

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Target: scaffold0127 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 85 - 194
Target Start/End: Complemental strand, 15420 - 15309
Alignment:
Q  85 tgaaaaccactcatttaaattgaaagaaatagg-aaaaagatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaatga 182  Q
    ||||||||||| ||||| |||||||||||  || ||||||||| | | |||| ||| ||||||||||| |||||||||||||||||||||| | ||| ||    
T  15420 tgaaaaccacttatttagattgaaagaaaaggggaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgaagaacga 15321  T
Q  183 aggagaaagaaa 194  Q
    ||||||||||||    
T  15320 aggagaaagaaa 15309  T

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Target: scaffold0049 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 83 - 189
Target Start/End: Original strand, 71443 - 71549
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaaaagatgcatatgggtcattttaggtcaaaaatgacctaaaaccacccctcctcaatgaatga 182  Q
    |||||||||||||  |||| |||||||||||   | |||| ||| | | |||| ||||||||||||||||||||||||||||||||| |||  |||||||    
T  71443 tgtgaaaaccacttgtttagattgaaagaaaagaggaaaatatgtagaggggtgattttaggtcaaaaatgacctaaaaccaccccttctctgtgaatga 71542  T
Q  183 aggagaa 189  Q
    |||||||    
T  71543 aggagaa 71549  T

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Target: scaffold0262 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 194
Target Start/End: Original strand, 1976 - 2089
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaat-aggaaaaa-gatgcatatgggtcattttaggtcaaaaatgacctaaaaccacccctcctcaatgaat 180  Q
    |||| |||||||| |||||||||||||||||  |||||||| |||| | ||| || ||||||||| ||||| ||||||||| |||  |||||||||||||    
T  1976 tgtgcaaaccacttatttaaattgaaagaaaagaggaaaaaagatgtagatgagtgattttaggtaaaaaaagacctaaaaacacatctcctcaatgaat 2075  T
Q  181 gaaggagaaagaaa 194  Q
    |||| |||||||||    
T  2076 gaagaagaaagaaa 2089  T

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Target: scaffold0026 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 83 - 194
Target Start/End: Original strand, 72022 - 72136
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg--aaaaagatgcatatgggtcattttaggtcaaaa-atgacctaaaaccacccctcctcaatgaa 179  Q
    ||||||||||||| ||||  |||||||||||  ||  ||||||||| | |  ||| ||| |||||||||| ||||||||||||||||||||||| |||||    
T  72022 tgtgaaaaccacttatttggattgaaagaaaagggggaaaaagatgaagaatggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaa 72121  T
Q  180 tgaaggagaaagaaa 194  Q
     ||||||||||||||    
T  72122 cgaaggagaaagaaa 72136  T

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Target: scaffold0445 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 83 - 195
Target Start/End: Complemental strand, 1274 - 1160
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaaaa-gatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaat 180  Q
    ||||||||||||| ||||| | |||||||||  ||||||| || | | | |||| ||| ||||||||||| ||||||||||||||| |||||| |||||     
T  1274 tgtgaaaaccacttatttagagtgaaagaaaagggaaaaaagaagtagaggggtgattctaggtcaaaaaatgacctaaaaccacctctcctcgatgaac 1175  T
Q  181 gaaggagaaagaaaa 195  Q
    |||||||||||||||    
T  1174 gaaggagaaagaaaa 1160  T

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Target: scaffold0554 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 187
Target Start/End: Complemental strand, 10807 - 10703
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatag-gaaaaagatgcatatgggtcattttaggtcaaaaatgacctaaaaccacccctcctcaatgaatg 181  Q
    ||||||||||||| ||||| ||| ||||||| || |||||||||  | | |||| | |||||||||||| ||||||||||||||| |||||| |||||||    
T  10807 tgtgaaaaccacttatttacattcaaagaaaaagcgaaaaagatctagaggggtgactttaggtcaaaa-tgacctaaaaccacctctcctcgatgaatg 10709  T
Q  182 aaggag 187  Q
    ||||||    
T  10708 aaggag 10703  T

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Target: scaffold0009 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 216
Target Start/End: Original strand, 58238 - 58373
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaataggaaaaa--gatgcatatgggtcattttaggtcaaaa-atgacctaaaaccacccctcctcaatgaa 179  Q
    |||| ||| |||| ||||| ||||||||||| ||||||||  |||||| | |||| |||||||||||||| ||||||||||||||||||||||| | ||     
T  58238 tgtggaaatcacttatttagattgaaagaaa-aggaaaaaaggatgcagaggggtgattttaggtcaaaaaatgacctaaaaccacccctcctcgacgag 58336  T
Q  180 tgaaggagaaagaaaacttataaagaaagtggagttt 216  Q
    |||| || || ||||||||| | ||||  ||||||||    
T  58337 tgaaagaaaacgaaaacttagagagaagttggagttt 58373  T

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Target: scaffold0492 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 12846 - 12733
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatag-gaaaaagatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaat 180  Q
    ||||||||||||| ||||||||||| |||||  | |||||| ||| |||  ||| ||| ||||||||||| ||||||||||||||| |||||  ||||||    
T  12846 tgtgaaaaccacttatttaaattgatagaaaaggagaaaaatatgtatagcggtgattctaggtcaaaaaatgacctaaaaccacctctccttgatgaat 12747  T
Q  181 gaaggagaaagaaa 194  Q
     || ||||||||||    
T  12746 caaagagaaagaaa 12733  T

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Target: scaffold0064 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 195
Target Start/End: Original strand, 19246 - 19309
Alignment:
Q  132 gggtcattttaggtcaaaaatgacctaaaaccacccctcctcaatgaatgaaggagaaagaaaa 195  Q
    |||| ||| ||||||||||| ||| ||||||||||||||||| |||| |||| |||||||||||    
T  19246 gggtaattctaggtcaaaaacgacataaaaccacccctcctcgatgagtgaaagagaaagaaaa 19309  T

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Target: scaffold0884 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 190
Target Start/End: Original strand, 2134 - 2240
Alignment:
Q  88 aaaccactcatttaaattgaaagaaatagg---aaaaagatgcatatgggtcattttaggtc-aaaaatgacctaaaaccacccctcctcaatgaatgaa 183  Q
    |||||||| ||||| ||||||||||| |||   ||||||||| | | |||| ||| ||| || ||||||||| ||||||||| ||||||| ||||| |||    
T  2134 aaaccacttatttagattgaaagaaaaaggggaaaaaagatgtagaggggtgattctagatcaaaaaatgacttaaaaccactcctcctcgatgaacgaa 2233  T
Q  184 ggagaaa 190  Q
    |||||||    
T  2234 ggagaaa 2240  T

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Target: scaffold0087 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 190
Target Start/End: Original strand, 25525 - 25597
Alignment:
Q  119 aaaagatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaatgaaggagaaa 190  Q
    |||||||| | | |||| ||| ||||||||||| |||| ||||||||||||||||| ||||| ||||||||||    
T  25525 aaaagatgtagaggggtgattataggtcaaaaaatgacataaaaccacccctcctcgatgaacgaaggagaaa 25597  T

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Target: scaffold0888 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 196
Target Start/End: Original strand, 1833 - 1948
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg-aaaaagatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaat 180  Q
    |||||||| |||| ||||| |||||||||||  || ||||||||||| |  ||| ||| ||||||||||| |||||||| | ||||||||||| || | |    
T  1833 tgtgaaaatcacttatttagattgaaagaaaggggaaaaaagatgcagagaggtgattctaggtcaaaaattgacctaatatcacccctcctcgataagt 1932  T
Q  181 gaaggagaaagaaaac 196  Q
    ||| ||| ||||||||    
T  1933 gaaagaggaagaaaac 1948  T

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Target: scaffold0219 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 216
Target Start/End: Original strand, 14998 - 15132
Alignment:
Q  85 tgaaaaccactcatttaaattgaaagaaatagg--aaaaagatgcatatgggtcattttaggtcaaaaa-tgacctaaaaccacccctcctcaatgaatg 181  Q
    ||||||| ||| ||||| ||||||||||| |||  ||||||||| | |  ||| ||| ||||||||||| | ||||||  |||| | ||||| |||||||    
T  14998 tgaaaacgacttatttagattgaaagaaaaagggaaaaaagatgtagagtggtgattctaggtcaaaaaataacctaaccccacacatcctcgatgaatg 15097  T
Q  182 aaggagaaagaaaacttataaagaaagtggagttt 216  Q
    |||||||||||||  ||| | ||||| ||||||||    
T  15098 aaggagaaagaaagtttagagagaaattggagttt 15132  T

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Target: scaffold0017 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 194
Target Start/End: Original strand, 32906 - 33020
Alignment:
Q  83 tgtgaaaaccactcatttaaattgaaagaaatagg--aaaaagatgcatatgggtcattttaggtc-aaaaatgacctaaaaccacccctcctcaatgaa 179  Q
    ||||||||||||| ||||| |||||||||||  ||   |||||||| | | |||| ||| || ||| ||||||||||||||||||| ||||||| || ||    
T  32906 tgtgaaaaccacttatttagattgaaagaaaaggggacaaaagatgtagaggggtgattctatgtcaaaaaatgacctaaaaccactcctcctcgataaa 33005  T
Q  180 tgaaggagaaagaaa 194  Q
     |||| |||||||||    
T  33006 cgaagaagaaagaaa 33020  T

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