View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8208A_low_329 (Length: 236)
Name: NF8208A_low_329
Description: NF8208A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8208A_low_329 |
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Alignment Details
Target: chr4 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 22 - 222
Target Start/End: Original strand, 1869383 - 1869582
Alignment:
| Q |
22 |
cactttacatgaaatacatttctaaattgtagtatccacactaaatttcatgcgataagaaagtgactgttagagagtgttaagaaagagagtgtttccg |
121 |
Q |
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| T |
1869383 |
cactttacgtgggatacatttctaaattatagtatccacactaaatttcatgcgataagaaagtgactattagagagtgttaagaaagagagtgtttccg |
1869482 |
T |
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| Q |
122 |
atattcctatataaatagccgttatcaatccgcatatgttttttaaaagaaaaatgagactcttttagagcattatgtaccttacaaatgatggtgatgt |
221 |
Q |
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| T |
1869483 |
atattcctatataaa-agccgttatcaatccgcatatgttttttaaaagaaaaatgagactcttttagagcattatgtaccttacaaatgatggtgatgt |
1869581 |
T |
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