View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8208A_low_334 (Length: 235)
Name: NF8208A_low_334
Description: NF8208A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8208A_low_334 |
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Alignment Details
Target: chr4 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 42 - 218
Target Start/End: Complemental strand, 10600545 - 10600369
Alignment:
| Q |
42 |
aatctatgtaagaattgaaacatgccaagcctaagcctatctcttcctcttccttctcctcacataaatctcaactcacaacaaaactttaaccatttca |
141 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
10600545 |
aatctatgtaagaattaaaacatgccaagcctaagcctatctcttcctcttccttctcctcacatcaatctcaactcacaacaaaactttaaccatttca |
10600446 |
T |
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| Q |
142 |
acaacccacaacaacttcacaaagccattacaaccttaaacctaacagacacagaatcaacccataacaacaaactc |
218 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10600445 |
acaacccacaacaactccacaaagccattacaaccttaaacctaacagacacagaatcaacccataacaacaaactc |
10600369 |
T |
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