View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8208A_low_336 (Length: 235)

Name: NF8208A_low_336
Description: NF8208A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8208A_low_336
NF8208A_low_336
[»] scaffold0217 (1 HSPs)
scaffold0217 (3-235)||(27889-28122)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-235)||(82732-82971)
[»] chr4 (69 HSPs)
chr4 (3-235)||(14476818-14477047)
chr4 (3-180)||(13164623-13164801)
chr4 (8-116)||(10272949-10273057)
chr4 (1-128)||(9621773-9621900)
chr4 (2-112)||(25091252-25091362)
chr4 (2-112)||(37019268-37019378)
chr4 (3-112)||(10694591-10694700)
chr4 (3-112)||(10908357-10908466)
chr4 (2-104)||(16998132-16998234)
chr4 (2-112)||(53630816-53630926)
chr4 (3-112)||(15008565-15008674)
chr4 (3-112)||(26445483-26445592)
chr4 (8-112)||(10237847-10237951)
chr4 (8-87)||(12622936-12623015)
chr4 (2-88)||(630246-630332)
chr4 (2-112)||(2424964-2425074)
chr4 (2-104)||(14630433-14630535)
chr4 (2-112)||(15117866-15117976)
chr4 (2-112)||(19609923-19610033)
chr4 (2-112)||(42875398-42875507)
chr4 (2-112)||(44772597-44772707)
chr4 (2-112)||(46740797-46740907)
chr4 (2-90)||(1837033-1837121)
chr4 (2-90)||(18239126-18239214)
chr4 (1-112)||(55582790-55582901)
chr4 (2-112)||(7640700-7640810)
chr4 (2-112)||(11425544-11425654)
chr4 (2-112)||(15011856-15011966)
chr4 (2-88)||(33243639-33243725)
chr4 (2-112)||(35660445-35660555)
chr4 (3-88)||(28385866-28385951)
chr4 (3-88)||(36038433-36038518)
chr4 (3-88)||(49547288-49547373)
chr4 (1-88)||(33849365-33849452)
chr4 (2-80)||(3485539-3485617)
chr4 (2-112)||(14549225-14549335)
chr4 (2-112)||(15114821-15114931)
chr4 (10-88)||(15534744-15534822)
chr4 (3-88)||(30147478-30147563)
chr4 (11-104)||(47357224-47357317)
chr4 (8-112)||(19435046-19435150)
chr4 (3-86)||(18247798-18247881)
chr4 (2-112)||(40229902-40230013)
chr4 (16-90)||(14873614-14873688)
chr4 (2-88)||(19081684-19081770)
chr4 (2-112)||(44023947-44024057)
chr4 (11-88)||(18213189-18213266)
chr4 (3-86)||(8374099-8374182)
chr4 (25-112)||(24046900-24046987)
chr4 (2-112)||(9923795-9923905)
chr4 (2-112)||(11478954-11479064)
chr4 (24-106)||(19020048-19020130)
chr4 (2-112)||(19566262-19566372)
chr4 (2-88)||(25513365-25513451)
chr4 (2-112)||(53387280-53387390)
chr4 (3-104)||(10643787-10643888)
chr4 (11-80)||(16731741-16731810)
chr4 (3-86)||(14995703-14995786)
chr4 (3-74)||(15287826-15287897)
chr4 (3-74)||(15294936-15295007)
chr4 (25-112)||(15344474-15344561)
chr4 (1-80)||(19697938-19698017)
chr4 (1-80)||(19708523-19708602)
chr4 (16-106)||(5683336-5683426)
chr4 (2-88)||(14049140-14049226)
chr4 (24-86)||(22355048-22355110)
chr4 (43-104)||(18108262-18108323)
chr4 (44-104)||(45314722-45314782)
chr4 (16-88)||(56115193-56115265)
[»] chr3 (115 HSPs)
chr3 (3-235)||(3161265-3161494)
chr3 (16-130)||(12151344-12151458)
chr3 (8-117)||(15025733-15025842)
chr3 (3-116)||(21846027-21846140)
chr3 (1-130)||(29907072-29907201)
chr3 (1-130)||(29948238-29948367)
chr3 (1-130)||(29997392-29997521)
chr3 (3-116)||(48044091-48044204)
chr3 (3-130)||(48630707-48630834)
chr3 (3-116)||(25201462-25201575)
chr3 (3-130)||(12540839-12540966)
chr3 (3-126)||(12917978-12918101)
chr3 (8-125)||(45803997-45804114)
chr3 (1-129)||(3527820-3527947)
chr3 (3-130)||(12155377-12155504)
chr3 (2-112)||(24546439-24546549)
chr3 (2-112)||(35354201-35354311)
chr3 (2-112)||(40807595-40807705)
chr3 (2-112)||(40812432-40812542)
chr3 (2-112)||(54875826-54875936)
chr3 (2-112)||(5205997-5206107)
chr3 (10-112)||(15465693-15465795)
chr3 (10-112)||(35064932-35065034)
chr3 (3-112)||(5215246-5215355)
chr3 (8-112)||(11259029-11259133)
chr3 (1-112)||(6156304-6156415)
chr3 (2-112)||(2841806-2841916)
chr3 (2-112)||(12511447-12511557)
chr3 (2-112)||(17519216-17519326)
chr3 (2-112)||(17534078-17534188)
chr3 (2-112)||(17670052-17670162)
chr3 (2-112)||(22306926-22307036)
chr3 (2-112)||(22763973-22764083)
chr3 (2-112)||(34159864-34159974)
chr3 (2-112)||(43889142-43889252)
chr3 (2-112)||(55477029-55477139)
chr3 (3-112)||(17685187-17685296)
chr3 (2-90)||(17207961-17208049)
chr3 (2-90)||(45606420-45606508)
chr3 (1-88)||(42150-42237)
chr3 (1-112)||(8928007-8928118)
chr3 (3-90)||(26054779-26054866)
chr3 (10-112)||(6468656-6468758)
chr3 (2-112)||(10541801-10541911)
chr3 (2-112)||(10563308-10563418)
chr3 (2-112)||(14508446-14508556)
chr3 (18-112)||(14519861-14519955)
chr3 (2-112)||(17463716-17463826)
chr3 (2-88)||(28848135-28848221)
chr3 (2-112)||(43550020-43550130)
chr3 (2-112)||(49900335-49900445)
chr3 (2-112)||(50348369-50348479)
chr3 (8-129)||(3264851-3264972)
chr3 (3-112)||(5223922-5224031)
chr3 (3-88)||(12305685-12305770)
chr3 (2-111)||(14152742-14152851)
chr3 (3-112)||(16979509-16979618)
chr3 (3-88)||(18739518-18739603)
chr3 (16-117)||(40039701-40039802)
chr3 (3-88)||(54521385-54521470)
chr3 (2-90)||(13151304-13151392)
chr3 (8-112)||(14441767-14441871)
chr3 (2-90)||(15412991-15413079)
chr3 (8-112)||(16324890-16324994)
chr3 (41-129)||(36527907-36527995)
chr3 (2-88)||(11913344-11913430)
chr3 (2-112)||(12470401-12470511)
chr3 (2-88)||(14647446-14647532)
chr3 (16-90)||(15566134-15566208)
chr3 (2-112)||(31224296-31224406)
chr3 (2-112)||(46722969-46723079)
chr3 (2-88)||(51602943-51603029)
chr3 (2-112)||(55291984-55292094)
chr3 (11-88)||(14763313-14763390)
chr3 (3-112)||(54330650-54330759)
chr3 (8-88)||(3803458-3803538)
chr3 (8-88)||(17538729-17538809)
chr3 (25-112)||(15931873-15931960)
chr3 (3-90)||(25104548-25104634)
chr3 (2-88)||(6159020-6159106)
chr3 (2-112)||(10247237-10247347)
chr3 (10-88)||(10989155-10989233)
chr3 (2-88)||(33564752-33564838)
chr3 (2-88)||(43928974-43929060)
chr3 (2-112)||(50755725-50755835)
chr3 (11-88)||(9533752-9533829)
chr3 (3-88)||(10833683-10833768)
chr3 (1-86)||(12808564-12808649)
chr3 (3-88)||(13436861-13436946)
chr3 (11-112)||(17044565-17044666)
chr3 (11-80)||(20248336-20248405)
chr3 (2-111)||(41172714-41172822)
chr3 (16-112)||(17046725-17046821)
chr3 (2-110)||(17693669-17693777)
chr3 (1-88)||(1988574-1988661)
chr3 (17-112)||(18699831-18699926)
chr3 (3-74)||(29544356-29544427)
chr3 (1-74)||(8269328-8269401)
chr3 (1-74)||(8276439-8276512)
chr3 (16-85)||(17759015-17759084)
chr3 (11-112)||(18889963-18890064)
chr3 (16-85)||(19060335-19060404)
chr3 (11-80)||(27840524-27840593)
chr3 (11-88)||(38311355-38311432)
chr3 (2-90)||(13153770-13153857)
chr3 (2-86)||(13519908-13519992)
chr3 (2-90)||(14671445-14671533)
chr3 (2-110)||(19444112-19444219)
chr3 (44-112)||(35961272-35961340)
chr3 (11-86)||(14528600-14528675)
chr3 (25-112)||(18893223-18893310)
chr3 (3-86)||(25058357-25058440)
chr3 (44-104)||(9511551-9511611)
chr3 (44-104)||(9519526-9519586)
chr3 (44-112)||(50351385-50351453)
[»] chr2 (71 HSPs)
chr2 (26-235)||(20006661-20006867)
chr2 (16-235)||(45527705-45527924)
chr2 (1-129)||(14183734-14183862)
chr2 (51-235)||(19819555-19819736)
chr2 (1-129)||(14179996-14180124)
chr2 (11-235)||(19646390-19646608)
chr2 (2-112)||(5031473-5031583)
chr2 (3-112)||(25183786-25183895)
chr2 (1-129)||(19196417-19196545)
chr2 (3-117)||(18358313-18358427)
chr2 (2-112)||(19201543-19201653)
chr2 (2-112)||(23968966-23969076)
chr2 (2-112)||(24781183-24781293)
chr2 (2-104)||(9785189-9785290)
chr2 (2-112)||(9975528-9975638)
chr2 (2-112)||(17307086-17307195)
chr2 (2-112)||(18809481-18809591)
chr2 (2-112)||(39682852-39682962)
chr2 (3-104)||(21081315-21081416)
chr2 (2-112)||(40911922-40912033)
chr2 (2-112)||(2524090-2524200)
chr2 (2-112)||(10039477-10039587)
chr2 (2-112)||(23711527-23711637)
chr2 (2-112)||(26505917-26506027)
chr2 (2-112)||(26508395-26508505)
chr2 (2-112)||(27920278-27920388)
chr2 (2-112)||(28577637-28577747)
chr2 (2-112)||(28652845-28652955)
chr2 (3-88)||(10684277-10684362)
chr2 (16-112)||(31345718-31345814)
chr2 (2-90)||(34402036-34402124)
chr2 (10-88)||(20261782-20261860)
chr2 (2-112)||(36839770-36839880)
chr2 (2-112)||(38968018-38968128)
chr2 (11-88)||(6260730-6260807)
chr2 (11-88)||(19662007-19662084)
chr2 (3-112)||(22255811-22255920)
chr2 (3-88)||(23778639-23778724)
chr2 (2-90)||(23131422-23131510)
chr2 (2-90)||(23133889-23133977)
chr2 (11-86)||(19887250-19887325)
chr2 (29-112)||(21316032-21316115)
chr2 (29-112)||(21335823-21335906)
chr2 (2-112)||(24515785-24515895)
chr2 (2-112)||(571936-572046)
chr2 (18-112)||(21368706-21368800)
chr2 (10-112)||(22694875-22694977)
chr2 (2-88)||(23136142-23136228)
chr2 (2-112)||(27484813-27484923)
chr2 (2-120)||(36734828-36734946)
chr2 (16-110)||(41301330-41301424)
chr2 (11-88)||(6483142-6483219)
chr2 (11-88)||(6486609-6486686)
chr2 (16-112)||(22501399-22501495)
chr2 (16-112)||(22509333-22509429)
chr2 (16-88)||(24383134-24383206)
chr2 (16-112)||(31520716-31520812)
chr2 (3-74)||(23338744-23338815)
chr2 (2-112)||(20590665-20590775)
chr2 (10-112)||(22690279-22690381)
chr2 (2-112)||(23068793-23068903)
chr2 (66-128)||(23799589-23799651)
chr2 (2-112)||(32039012-32039122)
chr2 (11-80)||(9242391-9242460)
chr2 (11-88)||(23759988-23760065)
chr2 (8-112)||(1384035-1384139)
chr2 (3-74)||(24686565-24686636)
chr2 (11-86)||(27261391-27261466)
chr2 (3-49)||(29113973-29114019)
chr2 (2-71)||(149890-149959)
chr2 (11-112)||(22332315-22332416)
[»] chr7 (112 HSPs)
chr7 (3-235)||(33059647-33059876)
chr7 (1-182)||(18985074-18985253)
chr7 (1-182)||(18999702-18999881)
chr7 (1-235)||(42566448-42566679)
chr7 (3-128)||(33556713-33556838)
chr7 (11-128)||(13316712-13316829)
chr7 (1-128)||(36301301-36301428)
chr7 (1-127)||(18570066-18570192)
chr7 (1-129)||(8931432-8931560)
chr7 (8-125)||(38294870-38294987)
chr7 (2-112)||(12371874-12371984)
chr7 (2-112)||(12465603-12465713)
chr7 (2-112)||(36685592-36685702)
chr7 (3-112)||(1856744-1856853)
chr7 (3-112)||(29052499-29052608)
chr7 (2-112)||(8851502-8851612)
chr7 (2-112)||(16462635-16462745)
chr7 (2-112)||(18875189-18875299)
chr7 (3-112)||(16550348-16550457)
chr7 (3-112)||(16615205-16615314)
chr7 (16-112)||(13917930-13918026)
chr7 (2-129)||(11309699-11309826)
chr7 (2-113)||(13147815-13147926)
chr7 (2-112)||(13869886-13869994)
chr7 (2-112)||(18431250-18431361)
chr7 (2-112)||(708898-709008)
chr7 (2-112)||(3287589-3287699)
chr7 (2-112)||(13647841-13647951)
chr7 (2-112)||(15376227-15376337)
chr7 (2-112)||(15720348-15720458)
chr7 (2-112)||(16233059-16233169)
chr7 (2-112)||(20384637-20384747)
chr7 (2-112)||(20585951-20586061)
chr7 (2-112)||(30820599-30820709)
chr7 (2-112)||(32301781-32301891)
chr7 (2-112)||(43277086-43277196)
chr7 (2-112)||(46386430-46386540)
chr7 (2-112)||(47094679-47094789)
chr7 (3-112)||(25926644-25926753)
chr7 (3-112)||(32160546-32160655)
chr7 (2-112)||(12323273-12323383)
chr7 (2-88)||(14928675-14928761)
chr7 (2-88)||(15352141-15352227)
chr7 (2-112)||(16580259-16580369)
chr7 (2-112)||(44374545-44374655)
chr7 (2-112)||(44383410-44383520)
chr7 (2-112)||(48213288-48213398)
chr7 (2-111)||(8514089-8514198)
chr7 (3-88)||(11303810-11303895)
chr7 (3-112)||(11661704-11661813)
chr7 (11-88)||(14566625-14566702)
chr7 (3-88)||(29797173-29797258)
chr7 (3-88)||(29800992-29801077)
chr7 (11-104)||(46473665-46473758)
chr7 (8-112)||(4691245-4691349)
chr7 (2-90)||(11392813-11392901)
chr7 (8-112)||(14188643-14188747)
chr7 (2-90)||(14317692-14317780)
chr7 (2-90)||(20488001-20488089)
chr7 (2-86)||(34957796-34957880)
chr7 (2-90)||(39431571-39431659)
chr7 (8-112)||(44190598-44190702)
chr7 (2-86)||(45847168-45847252)
chr7 (2-112)||(15576176-15576284)
chr7 (2-85)||(19282718-19282801)
chr7 (3-86)||(23664467-23664550)
chr7 (2-88)||(58761-58847)
chr7 (2-112)||(11067067-11067177)
chr7 (2-112)||(13745119-13745229)
chr7 (3-113)||(14161199-14161309)
chr7 (2-88)||(15214122-15214208)
chr7 (3-85)||(16108203-16108285)
chr7 (2-112)||(16999031-16999141)
chr7 (2-112)||(27217399-27217509)
chr7 (2-112)||(32433932-32434042)
chr7 (2-112)||(38828660-38828770)
chr7 (11-88)||(10896346-10896423)
chr7 (11-88)||(14422408-14422485)
chr7 (11-88)||(18872783-18872860)
chr7 (2-111)||(20619886-20619995)
chr7 (11-112)||(25942036-25942137)
chr7 (1-112)||(14153314-14153425)
chr7 (1-104)||(37727269-37727372)
chr7 (2-88)||(456884-456969)
chr7 (2-112)||(4325655-4325765)
chr7 (2-80)||(12127506-12127584)
chr7 (2-112)||(14258951-14259061)
chr7 (8-110)||(15119657-15119759)
chr7 (2-112)||(24270325-24270435)
chr7 (2-88)||(32126053-32126139)
chr7 (11-112)||(15167574-15167675)
chr7 (11-88)||(16009001-16009078)
chr7 (2-112)||(47975258-47975364)
chr7 (16-88)||(17070650-17070722)
chr7 (3-90)||(16410619-16410706)
chr7 (2-120)||(37538999-37539117)
chr7 (11-85)||(148044-148118)
chr7 (2-112)||(14105810-14105920)
chr7 (2-88)||(32771951-32772037)
chr7 (43-112)||(11309908-11309977)
chr7 (24-86)||(10000973-10001035)
chr7 (2-112)||(17505347-17505457)
chr7 (2-112)||(17547757-17547867)
chr7 (16-85)||(16383178-16383247)
chr7 (67-112)||(20252750-20252795)
chr7 (9-85)||(8563941-8564017)
chr7 (44-112)||(8756781-8756849)
chr7 (44-112)||(13699274-13699342)
chr7 (16-88)||(15978413-15978485)
chr7 (16-112)||(18080075-18080171)
chr7 (2-78)||(26355495-26355571)
chr7 (2-78)||(26357947-26358023)
[»] chr8 (72 HSPs)
chr8 (45-235)||(22310225-22310412)
chr8 (3-128)||(12037800-12037925)
chr8 (3-223)||(20878833-20879050)
chr8 (3-112)||(16198433-16198542)
chr8 (1-129)||(23883436-23883564)
chr8 (2-112)||(5761132-5761242)
chr8 (2-112)||(6573400-6573510)
chr8 (2-112)||(22207866-22207976)
chr8 (2-112)||(36732867-36732977)
chr8 (32-129)||(23885920-23886017)
chr8 (8-112)||(36305257-36305361)
chr8 (2-112)||(1484940-1485050)
chr8 (2-112)||(4381136-4381246)
chr8 (2-112)||(18834070-18834180)
chr8 (10-108)||(19140368-19140466)
chr8 (2-112)||(22258647-22258757)
chr8 (2-112)||(22483345-22483455)
chr8 (2-112)||(44432461-44432571)
chr8 (3-112)||(26454310-26454419)
chr8 (11-112)||(45559528-45559629)
chr8 (2-90)||(4483840-4483928)
chr8 (17-112)||(38989064-38989159)
chr8 (17-112)||(39020161-39020256)
chr8 (2-112)||(5082555-5082665)
chr8 (2-112)||(5852806-5852916)
chr8 (2-112)||(6102096-6102206)
chr8 (2-112)||(14408958-14409068)
chr8 (2-88)||(18024038-18024124)
chr8 (2-112)||(20178864-20178974)
chr8 (2-88)||(38185429-38185515)
chr8 (2-112)||(42818250-42818360)
chr8 (2-112)||(45290061-45290171)
chr8 (3-88)||(8414093-8414178)
chr8 (2-90)||(23914544-23914632)
chr8 (3-86)||(22147036-22147119)
chr8 (1-112)||(25295731-25295842)
chr8 (1-112)||(25757751-25757862)
chr8 (2-112)||(17978760-17978870)
chr8 (10-112)||(20045717-20045819)
chr8 (2-112)||(21399309-21399419)
chr8 (2-112)||(21793802-21793912)
chr8 (2-112)||(39936354-39936464)
chr8 (3-80)||(11775353-11775430)
chr8 (11-112)||(19331929-19332030)
chr8 (3-112)||(23478679-23478788)
chr8 (2-87)||(36405403-36405488)
chr8 (11-88)||(44477047-44477124)
chr8 (11-88)||(44480309-44480386)
chr8 (16-88)||(8728294-8728366)
chr8 (11-106)||(223280-223375)
chr8 (11-106)||(688051-688146)
chr8 (11-106)||(736903-736998)
chr8 (11-106)||(860798-860893)
chr8 (9-88)||(17795855-17795934)
chr8 (2-112)||(14824313-14824423)
chr8 (10-80)||(21513950-21514020)
chr8 (2-88)||(25483817-25483903)
chr8 (2-87)||(22474375-22474460)
chr8 (1-66)||(25657858-25657923)
chr8 (11-88)||(27941241-27941318)
chr8 (16-120)||(22313422-22313526)
chr8 (25-112)||(17437684-17437771)
chr8 (2-85)||(42559871-42559954)
chr8 (2-88)||(364411-364497)
chr8 (2-88)||(18677578-18677664)
chr8 (16-88)||(14397268-14397340)
chr8 (1-80)||(18612017-18612096)
chr8 (3-86)||(18618889-18618971)
chr8 (19-74)||(21860980-21861035)
chr8 (2-112)||(22002291-22002401)
chr8 (3-104)||(24907381-24907482)
chr8 (16-88)||(20454862-20454934)
[»] chr1 (43 HSPs)
chr1 (1-235)||(21190010-21190241)
chr1 (3-130)||(35893509-35893636)
chr1 (3-120)||(21244371-21244488)
chr1 (2-112)||(4596188-4596298)
chr1 (2-112)||(19676310-19676420)
chr1 (3-104)||(12710495-12710596)
chr1 (16-112)||(42912649-42912745)
chr1 (1-112)||(21180667-21180778)
chr1 (2-112)||(13989404-13989514)
chr1 (2-112)||(16058657-16058767)
chr1 (2-112)||(20633977-20634087)
chr1 (2-90)||(14792905-14792993)
chr1 (2-112)||(2332553-2332663)
chr1 (2-112)||(17902105-17902215)
chr1 (2-112)||(18121203-18121313)
chr1 (2-80)||(44892078-44892156)
chr1 (2-112)||(50544450-50544560)
chr1 (3-112)||(28312947-28313056)
chr1 (3-112)||(46198069-46198178)
chr1 (16-112)||(29763991-29764087)
chr1 (2-113)||(20588277-20588387)
chr1 (2-113)||(20592815-20592925)
chr1 (2-88)||(1643216-1643302)
chr1 (2-112)||(21046392-21046502)
chr1 (2-112)||(21474600-21474710)
chr1 (2-88)||(45574395-45574481)
chr1 (2-112)||(51082815-51082925)
chr1 (3-88)||(296978-297063)
chr1 (3-88)||(50001097-50001182)
chr1 (41-129)||(10812943-10813031)
chr1 (16-112)||(14237969-14238065)
chr1 (10-88)||(22130416-22130494)
chr1 (20-88)||(20437588-20437656)
chr1 (16-104)||(22823764-22823852)
chr1 (2-86)||(45496571-45496655)
chr1 (3-112)||(9784687-9784796)
chr1 (3-88)||(29535614-29535699)
chr1 (2-112)||(41227051-41227157)
chr1 (16-88)||(16372374-16372446)
chr1 (3-86)||(18060542-18060625)
chr1 (44-112)||(39060694-39060763)
chr1 (88-128)||(34392263-34392303)
chr1 (44-112)||(51323874-51323942)
[»] chr5 (65 HSPs)
chr5 (25-233)||(21403801-21404006)
chr5 (3-114)||(20312551-20312662)
chr5 (2-112)||(8833550-8833660)
chr5 (3-112)||(1627725-1627834)
chr5 (2-112)||(16604947-16605057)
chr5 (2-112)||(17011325-17011435)
chr5 (2-112)||(21554722-21554832)
chr5 (2-112)||(43243001-43243111)
chr5 (3-112)||(29448437-29448546)
chr5 (2-88)||(22758233-22758319)
chr5 (2-112)||(39245674-39245784)
chr5 (2-90)||(264282-264370)
chr5 (8-112)||(19921233-19921336)
chr5 (16-112)||(21557401-21557497)
chr5 (2-90)||(26762022-26762110)
chr5 (2-90)||(39363944-39364032)
chr5 (1-88)||(6766284-6766371)
chr5 (1-88)||(24276948-24277035)
chr5 (1-88)||(24385178-24385265)
chr5 (2-112)||(8504212-8504322)
chr5 (2-112)||(14026151-14026261)
chr5 (2-112)||(18419011-18419121)
chr5 (2-112)||(18744248-18744358)
chr5 (2-112)||(20909550-20909660)
chr5 (2-112)||(23065052-23065162)
chr5 (2-112)||(29351464-29351574)
chr5 (10-88)||(36460593-36460671)
chr5 (11-88)||(19511810-19511887)
chr5 (3-88)||(37804417-37804502)
chr5 (11-88)||(38145090-38145167)
chr5 (3-80)||(41875937-41876014)
chr5 (11-88)||(42961000-42961077)
chr5 (10-86)||(9776730-9776806)
chr5 (11-86)||(11962-12037)
chr5 (16-87)||(263481-263552)
chr5 (11-106)||(19499467-19499562)
chr5 (11-86)||(22367070-22367145)
chr5 (11-86)||(25426236-25426311)
chr5 (2-112)||(32607668-32607778)
chr5 (2-112)||(20566153-20566263)
chr5 (151-235)||(21419989-21420069)
chr5 (2-112)||(23199735-23199845)
chr5 (2-112)||(24617266-24617376)
chr5 (2-112)||(24713497-24713607)
chr5 (2-112)||(24746525-24746635)
chr5 (2-112)||(29346518-29346628)
chr5 (2-112)||(29348991-29349101)
chr5 (2-80)||(38620006-38620084)
chr5 (3-112)||(17909066-17909175)
chr5 (11-80)||(18778581-18778650)
chr5 (3-88)||(33472908-33472993)
chr5 (11-86)||(22750566-22750641)
chr5 (25-112)||(31456397-31456484)
chr5 (3-112)||(16063084-16063191)
chr5 (2-64)||(26749678-26749740)
chr5 (11-88)||(22336943-22337020)
chr5 (11-88)||(22340481-22340558)
chr5 (3-88)||(27868919-27869004)
chr5 (2-111)||(36509127-36509236)
chr5 (3-74)||(7424948-7425019)
chr5 (11-86)||(21074184-21074259)
chr5 (11-86)||(43443984-43444059)
chr5 (76-130)||(26765674-26765728)
chr5 (24-86)||(35791713-35791775)
chr5 (11-80)||(23506568-23506637)
[»] chr6 (73 HSPs)
chr6 (3-235)||(18452132-18452361)
chr6 (16-130)||(30674057-30674171)
chr6 (3-128)||(10445481-10445606)
chr6 (2-112)||(19655572-19655682)
chr6 (9-130)||(1818213-1818334)
chr6 (3-112)||(23415503-23415612)
chr6 (2-112)||(15891054-15891164)
chr6 (2-112)||(31734305-31734415)
chr6 (2-112)||(32259445-32259555)
chr6 (17-112)||(17318480-17318575)
chr6 (2-112)||(7827571-7827681)
chr6 (2-112)||(8055568-8055678)
chr6 (2-112)||(15704954-15705064)
chr6 (2-112)||(18334106-18334216)
chr6 (2-112)||(20411015-20411125)
chr6 (2-112)||(24423085-24423195)
chr6 (2-112)||(27125819-27125929)
chr6 (2-112)||(27330315-27330425)
chr6 (2-112)||(27391055-27391165)
chr6 (3-112)||(15173799-15173908)
chr6 (3-112)||(27557261-27557370)
chr6 (8-88)||(1254380-1254460)
chr6 (20-112)||(25921328-25921420)
chr6 (2-112)||(2290694-2290804)
chr6 (2-112)||(7430122-7430232)
chr6 (2-112)||(19773052-19773162)
chr6 (2-112)||(23150610-23150720)
chr6 (2-112)||(25601620-25601730)
chr6 (2-112)||(33864816-33864926)
chr6 (3-88)||(12942752-12942837)
chr6 (3-88)||(23956485-23956570)
chr6 (3-88)||(25807755-25807840)
chr6 (8-112)||(18703163-18703267)
chr6 (8-112)||(18709098-18709202)
chr6 (8-112)||(23655938-23656042)
chr6 (1-88)||(19825831-19825918)
chr6 (2-117)||(35057098-35057213)
chr6 (2-88)||(8759860-8759946)
chr6 (2-112)||(8767606-8767716)
chr6 (8-90)||(20183184-20183266)
chr6 (8-90)||(22152725-22152807)
chr6 (2-112)||(22556848-22556958)
chr6 (2-112)||(29044909-29045019)
chr6 (3-112)||(13764945-13765054)
chr6 (3-88)||(15891923-15892008)
chr6 (3-88)||(28288851-28288936)
chr6 (2-71)||(34296611-34296680)
chr6 (3-87)||(14593969-14594053)
chr6 (16-112)||(18455429-18455525)
chr6 (1-88)||(4477281-4477368)
chr6 (1-88)||(23838622-23838709)
chr6 (11-86)||(27654572-27654647)
chr6 (2-88)||(911-997)
chr6 (2-88)||(1540425-1540511)
chr6 (8-74)||(7219211-7219277)
chr6 (2-112)||(19858436-19858546)
chr6 (23-112)||(23221464-23221553)
chr6 (16-88)||(22782789-22782861)
chr6 (11-86)||(25175171-25175246)
chr6 (2-88)||(12742880-12742966)
chr6 (2-80)||(19234716-19234794)
chr6 (2-112)||(26923961-26924071)
chr6 (2-76)||(34140970-34141044)
chr6 (2-76)||(34153586-34153660)
chr6 (2-74)||(19008847-19008919)
chr6 (16-112)||(25619314-25619410)
chr6 (11-86)||(16826343-16826418)
chr6 (173-223)||(10445326-10445375)
chr6 (24-74)||(19609651-19609701)
chr6 (144-197)||(31346563-31346615)
chr6 (16-88)||(5834092-5834164)
chr6 (44-112)||(18398517-18398585)
chr6 (8-80)||(27317902-27317974)
[»] scaffold0058 (2 HSPs)
scaffold0058 (16-235)||(60324-60540)
scaffold0058 (3-112)||(6057-6166)
[»] scaffold0165 (1 HSPs)
scaffold0165 (1-182)||(31432-31611)
[»] scaffold0017 (2 HSPs)
scaffold0017 (1-235)||(22845-23075)
scaffold0017 (44-112)||(26114-26182)
[»] scaffold0100 (2 HSPs)
scaffold0100 (16-130)||(9831-9945)
scaffold0100 (3-130)||(27259-27386)
[»] scaffold0394 (1 HSPs)
scaffold0394 (3-130)||(7896-8023)
[»] scaffold1102 (1 HSPs)
scaffold1102 (25-132)||(2532-2639)
[»] scaffold0004 (3 HSPs)
scaffold0004 (3-130)||(65455-65582)
scaffold0004 (3-130)||(74922-75049)
scaffold0004 (10-112)||(66383-66485)
[»] scaffold0730 (1 HSPs)
scaffold0730 (11-130)||(7000-7119)
[»] scaffold0148 (1 HSPs)
scaffold0148 (3-130)||(8349-8476)
[»] scaffold0205 (2 HSPs)
scaffold0205 (36-223)||(6312-6495)
scaffold0205 (2-90)||(30233-30321)
[»] scaffold0174 (4 HSPs)
scaffold0174 (3-130)||(15546-15673)
scaffold0174 (3-130)||(4466-4593)
scaffold0174 (3-130)||(10587-10714)
scaffold0174 (16-112)||(20431-20527)
[»] scaffold1160 (1 HSPs)
scaffold1160 (2-112)||(284-394)
[»] scaffold0077 (5 HSPs)
scaffold0077 (2-112)||(33938-34048)
scaffold0077 (1-112)||(17599-17710)
scaffold0077 (2-80)||(22522-22600)
scaffold0077 (2-71)||(40043-40112)
scaffold0077 (2-88)||(23192-23277)
[»] scaffold0051 (2 HSPs)
scaffold0051 (2-112)||(64412-64522)
scaffold0051 (10-80)||(31774-31844)
[»] scaffold0047 (1 HSPs)
scaffold0047 (2-112)||(78663-78773)
[»] scaffold0021 (1 HSPs)
scaffold0021 (2-112)||(169037-169147)
[»] scaffold0515 (1 HSPs)
scaffold0515 (3-112)||(4633-4742)
[»] scaffold0436 (1 HSPs)
scaffold0436 (3-112)||(8557-8666)
[»] scaffold0306 (1 HSPs)
scaffold0306 (3-112)||(4633-4742)
[»] scaffold1633 (1 HSPs)
scaffold1633 (16-112)||(804-900)
[»] scaffold0096 (1 HSPs)
scaffold0096 (8-112)||(21667-21771)
[»] scaffold0338 (2 HSPs)
scaffold0338 (1-112)||(3284-3395)
scaffold0338 (11-86)||(8625-8700)
[»] scaffold0048 (1 HSPs)
scaffold0048 (2-101)||(56586-56685)
[»] scaffold0737 (1 HSPs)
scaffold0737 (2-112)||(5056-5166)
[»] scaffold0452 (1 HSPs)
scaffold0452 (2-112)||(13008-13118)
[»] scaffold0444 (1 HSPs)
scaffold0444 (2-112)||(13931-14041)
[»] scaffold0292 (1 HSPs)
scaffold0292 (2-112)||(7112-7222)
[»] scaffold0232 (1 HSPs)
scaffold0232 (2-88)||(3893-3979)
[»] scaffold0162 (1 HSPs)
scaffold0162 (2-112)||(24406-24516)
[»] scaffold0134 (1 HSPs)
scaffold0134 (2-112)||(38360-38470)
[»] scaffold0108 (2 HSPs)
scaffold0108 (2-112)||(6016-6126)
scaffold0108 (2-112)||(7126-7236)
[»] scaffold0026 (4 HSPs)
scaffold0026 (2-112)||(21680-21790)
scaffold0026 (2-111)||(146332-146441)
scaffold0026 (11-88)||(111110-111187)
scaffold0026 (2-80)||(123903-123981)
[»] scaffold0023 (2 HSPs)
scaffold0023 (2-112)||(94949-95059)
scaffold0023 (19-112)||(105511-105603)
[»] scaffold0005 (1 HSPs)
scaffold0005 (2-104)||(186848-186950)
[»] scaffold0639 (1 HSPs)
scaffold0639 (16-112)||(6945-7042)
[»] scaffold0462 (3 HSPs)
scaffold0462 (3-112)||(10820-10929)
scaffold0462 (16-112)||(917-1013)
scaffold0462 (16-112)||(6423-6519)
[»] scaffold0138 (1 HSPs)
scaffold0138 (3-112)||(33710-33819)
[»] scaffold0117 (2 HSPs)
scaffold0117 (3-112)||(42292-42401)
scaffold0117 (1-112)||(21360-21471)
[»] scaffold0046 (1 HSPs)
scaffold0046 (3-112)||(22113-22222)
[»] scaffold0439 (1 HSPs)
scaffold0439 (16-112)||(4019-4115)
[»] scaffold0401 (1 HSPs)
scaffold0401 (2-90)||(8441-8529)
[»] scaffold0064 (2 HSPs)
scaffold0064 (16-112)||(58347-58443)
scaffold0064 (17-88)||(68524-68595)
[»] scaffold0061 (2 HSPs)
scaffold0061 (8-108)||(14935-15035)
scaffold0061 (8-108)||(23993-24093)
[»] scaffold0216 (1 HSPs)
scaffold0216 (1-112)||(21854-21965)
[»] scaffold1283 (1 HSPs)
scaffold1283 (2-112)||(810-920)
[»] scaffold1186 (1 HSPs)
scaffold1186 (2-104)||(1318-1420)
[»] scaffold0635 (1 HSPs)
scaffold0635 (2-112)||(7483-7593)
[»] scaffold0546 (1 HSPs)
scaffold0546 (2-112)||(10260-10370)
[»] scaffold0371 (1 HSPs)
scaffold0371 (2-112)||(10790-10900)
[»] scaffold0111 (1 HSPs)
scaffold0111 (2-112)||(12879-12989)
[»] scaffold0109 (2 HSPs)
scaffold0109 (2-112)||(2937-3047)
scaffold0109 (2-111)||(321-429)
[»] scaffold0034 (2 HSPs)
scaffold0034 (2-112)||(120509-120619)
scaffold0034 (18-113)||(29556-29651)
[»] scaffold0008 (1 HSPs)
scaffold0008 (2-112)||(11850-11960)
[»] scaffold0001 (4 HSPs)
scaffold0001 (3-112)||(169038-169147)
scaffold0001 (3-112)||(176391-176500)
scaffold0001 (1-112)||(152552-152663)
scaffold0001 (10-112)||(77286-77388)
[»] scaffold0200 (1 HSPs)
scaffold0200 (3-112)||(18192-18301)
[»] scaffold0020 (2 HSPs)
scaffold0020 (2-111)||(143213-143322)
scaffold0020 (2-112)||(169342-169450)
[»] scaffold1354 (1 HSPs)
scaffold1354 (3-119)||(244-360)
[»] scaffold0213 (2 HSPs)
scaffold0213 (2-90)||(18785-18873)
scaffold0213 (3-74)||(28540-28611)
[»] scaffold0112 (1 HSPs)
scaffold0112 (16-104)||(23561-23649)
[»] scaffold0016 (1 HSPs)
scaffold0016 (16-112)||(174505-174601)
[»] scaffold0468 (1 HSPs)
scaffold0468 (3-90)||(11562-11649)
[»] scaffold0127 (1 HSPs)
scaffold0127 (1-88)||(9663-9750)
[»] scaffold0044 (1 HSPs)
scaffold0044 (1-112)||(40938-41049)
[»] scaffold0599 (1 HSPs)
scaffold0599 (2-88)||(620-706)
[»] scaffold0241 (1 HSPs)
scaffold0241 (2-112)||(2163-2273)
[»] scaffold0080 (1 HSPs)
scaffold0080 (2-112)||(22134-22244)
[»] scaffold0040 (1 HSPs)
scaffold0040 (2-112)||(106546-106656)
[»] scaffold0039 (1 HSPs)
scaffold0039 (2-112)||(10272-10382)
[»] scaffold0422 (1 HSPs)
scaffold0422 (3-88)||(3586-3671)
[»] scaffold0054 (1 HSPs)
scaffold0054 (10-111)||(65332-65433)
[»] scaffold0414 (1 HSPs)
scaffold0414 (2-90)||(11690-11778)
[»] scaffold1783 (1 HSPs)
scaffold1783 (1-80)||(880-959)
[»] scaffold1766 (1 HSPs)
scaffold1766 (2-112)||(1039-1147)
[»] scaffold0104 (4 HSPs)
scaffold0104 (16-111)||(7819-7914)
scaffold0104 (16-111)||(14450-14545)
scaffold0104 (8-88)||(26549-26629)
scaffold0104 (8-88)||(27931-28011)
[»] scaffold0577 (1 HSPs)
scaffold0577 (2-80)||(6078-6156)
[»] scaffold0379 (1 HSPs)
scaffold0379 (2-112)||(10299-10409)
[»] scaffold0151 (1 HSPs)
scaffold0151 (2-112)||(9654-9764)
[»] scaffold0029 (1 HSPs)
scaffold0029 (2-88)||(11852-11938)
[»] scaffold0018 (1 HSPs)
scaffold0018 (2-112)||(21251-21361)
[»] scaffold0334 (2 HSPs)
scaffold0334 (11-88)||(139-216)
scaffold0334 (2-85)||(1711-1794)
[»] scaffold0317 (1 HSPs)
scaffold0317 (31-112)||(13144-13225)
[»] scaffold0293 (1 HSPs)
scaffold0293 (3-88)||(19603-19688)
[»] scaffold0011 (2 HSPs)
scaffold0011 (19-112)||(126347-126440)
scaffold0011 (2-80)||(33084-33162)
[»] scaffold0695 (1 HSPs)
scaffold0695 (2-90)||(6507-6595)
[»] scaffold0113 (1 HSPs)
scaffold0113 (44-112)||(34859-34927)
[»] scaffold0632 (1 HSPs)
scaffold0632 (2-85)||(791-874)
[»] scaffold0266 (1 HSPs)
scaffold0266 (11-74)||(796-859)
[»] scaffold0125 (2 HSPs)
scaffold0125 (16-111)||(1466-1561)
scaffold0125 (44-90)||(27921-27967)
[»] scaffold2015 (1 HSPs)
scaffold2015 (2-88)||(26-112)
[»] scaffold0676 (1 HSPs)
scaffold0676 (2-80)||(2518-2596)
[»] scaffold0146 (1 HSPs)
scaffold0146 (2-112)||(22627-22737)
[»] scaffold0395 (1 HSPs)
scaffold0395 (55-112)||(11296-11353)
[»] scaffold0328 (1 HSPs)
scaffold0328 (3-112)||(18988-19097)
[»] scaffold0575 (1 HSPs)
scaffold0575 (2-90)||(5669-5757)
[»] scaffold0256 (1 HSPs)
scaffold0256 (16-112)||(2410-2506)
[»] scaffold0098 (1 HSPs)
scaffold0098 (16-88)||(39722-39794)
[»] scaffold1404 (1 HSPs)
scaffold1404 (11-86)||(1434-1509)
[»] scaffold0672 (1 HSPs)
scaffold0672 (1-112)||(7898-8009)
[»] scaffold0607 (1 HSPs)
scaffold0607 (25-88)||(3329-3392)
[»] scaffold0231 (1 HSPs)
scaffold0231 (54-113)||(18049-18108)
[»] scaffold0116 (1 HSPs)
scaffold0116 (25-112)||(35937-36024)
[»] scaffold0063 (1 HSPs)
scaffold0063 (29-88)||(39279-39338)
[»] scaffold0057 (1 HSPs)
scaffold0057 (19-90)||(70188-70259)
[»] scaffold0035 (2 HSPs)
scaffold0035 (11-74)||(110040-110103)
scaffold0035 (11-74)||(118541-118604)
[»] scaffold1164 (1 HSPs)
scaffold1164 (16-86)||(969-1039)
[»] scaffold0335 (1 HSPs)
scaffold0335 (16-86)||(6176-6246)
[»] scaffold0019 (1 HSPs)
scaffold0019 (18-80)||(33869-33931)
[»] scaffold1278 (1 HSPs)
scaffold1278 (8-80)||(1084-1156)
[»] scaffold0516 (1 HSPs)
scaffold0516 (16-112)||(7977-8073)
[»] scaffold0385 (1 HSPs)
scaffold0385 (2-54)||(1-53)
[»] scaffold0203 (1 HSPs)
scaffold0203 (2-90)||(18469-18557)


Alignment Details
Target: scaffold0217 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 3 - 235
Target Start/End: Complemental strand, 28122 - 27889
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||||||||||| |||||||| ||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  28122 gttcctgcgtctgtttcacacgtttctattttgagttggtctttggtataaacatgaaagttgttgacaattgtgttatctttccagtagtcttggtttg 28023  T
Q  103 acgtgaaaatcttttgtgtataatttaaca-nnnnnnnnnatgaagatgtatgaatgaattattgttgttaaatatgatgtctatatgatgttattcatg 201  Q
    |||||||||| |||||||||||||||||||          | |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  28022 acgtgaaaatattttgtgtataatttaacatgttgtttttacgaagatgtatgaatcagttattgttgttaaatatgatgtctatatgatgttattcatg 27923  T
Q  202 gttgatgaatagtgagattatgttgcgaagttga 235  Q
    ||| |||| | ||||||||||| |||||| ||||    
T  27922 gttcatgatttgtgagattatgatgcgaatttga 27889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 82732 - 82971
Alignment:
Q  1 gtgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtt 100  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||    
T  82732 gtgttcatgcgtctatttcacacgtttctgttttgagttggtctttggtataaacatgaaagttgttgataattgtgttatctctccagtagttttggtt 82831  T
Q  101 tgacgtgaaaatcttttgtgtataatttaaca-----nnnnnnnnnatgaagatgtatgaatgaattattgttgttaaatatgatgtctatatgatgtta 195  Q
    ||| ||||||||||||||||||||||||||||              | |||||||||||||||||| ||||||||||||||||||||||||||||| |||    
T  82832 tgatgtgaaaatcttttgtgtataatttaacattttttttttttttacgaagatgtatgaatgaatgattgttgttaaatatgatgtctatatgatatta 82931  T
Q  196 ttcatggttgatgaatagtgagattatgttgcgaagttga 235  Q
    || ||||||||||||||  ||| ||||| |||||||||||    
T  82932 tttatggttgatgaatacggagcttatgatgcgaagttga 82971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 137; Significance: 1e-71; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 3 - 235
Target Start/End: Complemental strand, 14477047 - 14476818
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| |||||||| ||||||||| ||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  14477047 gttcttgcgtctgtttcacacgtttctgtttcgagttggtctttggtgtaaacatgaaagttgttggtaattgtgttatctttccagtagtcttggtttg 14476948  T
Q  103 acgtgaaaatcttttgtgtataatttaacannnnnnnnnatgaagatgtatgaatgaattattgttgttaaatatgatgtctatatgatgttattcatgg 202  Q
    |||||||||||||||||| |||||||||||         | ||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||| |    
T  14476947 acgtgaaaatcttttgtggataatttaaca--tgtttttacgaagaggtatgaatgaaatattgttgttaaatatgatgtctatatgatattattcat-g 14476851  T
Q  203 ttgatgaatagtgagattatgttgcgaagttga 235  Q
    ||||||||| ||||||||||| |||||||||||    
T  14476850 ttgatgaattgtgagattatgatgcgaagttga 14476818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 3 - 180
Target Start/End: Complemental strand, 13164801 - 13164623
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccag---tagtcttggt 99  Q
    |||| ||||||| ||||||||||||||| ||||| |||  ||||||| |||||||| ||||||||||||||||||||||||||||||   ||||||||||    
T  13164801 gttcttgcgtctttttcacacatttctgctttgatttgacctttggtgtaaacatgaaagttgttgataattgtgttatctttccagtagtagtcttggt 13164702  T
Q  100 ttgacgtgaaaatcttttgtgtataatttaacannnnnnnnnatgaagatgtatgaatgaattattgttgttaaatatgat 180  Q
    ||||| ||||||| ||||||| |||||||||||         | |||||||||||||||||||||||||||||||||||||    
T  13164701 ttgacatgaaaatattttgtggataatttaaca--tgtttttacgaagatgtatgaatgaattattgttgttaaatatgat 13164623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 8 - 116
Target Start/End: Complemental strand, 10273057 - 10272949
Alignment:
Q  8 tgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtg 107  Q
    ||||||| ||| |||| |||||||||||||||||||||  || |||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||    
T  10273057 tgcgtctgtttaacacgtttctgttttgagttggtcttcagtgtaaacatgaaagttgttgataattgtgttatctttccaatagtcttggtttgatgtg 10272958  T
Q  108 aaaatcttt 116  Q
    || ||||||    
T  10272957 aatatcttt 10272949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 9621900 - 9621773
Alignment:
Q  1 gtgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtt 100  Q
    |||||| ||||||| |||| ||| ||||| |||||||||||  ||| || || ||||| ||||| |||||||||||||||||||||| |||  |||||||    
T  9621900 gtgttcttgcgtctgtttcgcacgtttctattttgagttggcatttagtgtatacatgaaagttattgataattgtgttatctttcctgtatccttggtt 9621801  T
Q  101 tgacgtgaaaatcttttgtgtataattt 128  Q
    |||||||||||||||||||| |||||||    
T  9621800 tgacgtgaaaatcttttgtgaataattt 9621773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 25091362 - 25091252
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| |||||||| |||| ||||||||| |  |||||||    
T  25091362 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgagttagctttccagtggctttggttt 25091263  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  25091262 gacgtgaaaat 25091252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 37019378 - 37019268
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| |||||||| |||| ||||||||| |  |||||||    
T  37019378 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgagttagctttccagtggctttggttt 37019279  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  37019278 gacgtgaaaat 37019268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 10694591 - 10694700
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| ||| ||||||||||||||||| |||| ||||||| |||||||| ||||||| ||||||||||||| ||||||||| |  ||||||||    
T  10694591 gttcttgcgtctttttgacacatttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagtggctttggtttg 10694690  T
Q  103 acgtgaaaat 112  Q
    || |||||||    
T  10694691 acttgaaaat 10694700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 10908357 - 10908466
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| ||| ||||||||||||||||| |||| ||||||| |||||||| ||||||| ||||||||||||| ||||||||| |  ||||||||    
T  10908357 gttcttgcgtctttttgacacatttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagtggctttggtttg 10908456  T
Q  103 acgtgaaaat 112  Q
    || |||||||    
T  10908457 acttgaaaat 10908466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 16998234 - 16998132
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||||||||| ||||||||| |  |||||||    
T  16998234 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagtggctttggttt 16998135  T
Q  102 gac 104  Q
    |||    
T  16998134 gac 16998132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 53630816 - 53630926
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||  ||||||| |||||||| ||||||| |||||||| |||| ||||||||| |  |||||||    
T  53630816 tgttcttgcgtctttttcacacgtttctgttttgaattgacctttggtgtaaacatgaaagttgtagataattgagttagctttccagtggctttggttt 53630915  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  53630916 gacgtgaaaat 53630926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 15008674 - 15008565
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| |||||||| ||| |||||||| |||||||||||| |||||||| ||||||| ||||||||||||| ||||||||| |  |||||||     
T  15008674 gttcttgcgtctttttcacacgtttatgttttgaattggtctttggtgtaaacatgaaagttgtagataattgtgttagctttccagtggctttggtttt 15008575  T
Q  103 acgtgaaaat 112  Q
    || |||||||    
T  15008574 acttgaaaat 15008565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 26445592 - 26445483
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| |||||||| |||| |||||||||||  ||||||||    
T  26445592 gttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgagttagctttccagtagctttggtttg 26445493  T
Q  103 acgtgaaaat 112  Q
    |  |||||||    
T  26445492 aattgaaaat 26445483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 112
Target Start/End: Original strand, 10237847 - 10237951
Alignment:
Q  8 tgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtg 107  Q
    ||||||| ||||||| |||| |||||||| ||||||||||||||||| ||| ||||| | ||||||||||||| ||||||||| |  |||||||||| ||    
T  10237847 tgcgtctttttcacatatttttgttttgaattggtctttggtataaatatgaaagttttagataattgtgttagctttccagtggcgttggtttgacttg 10237946  T
Q  108 aaaat 112  Q
    |||||    
T  10237947 aaaat 10237951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 8 - 87
Target Start/End: Complemental strand, 12623015 - 12622936
Alignment:
Q  8 tgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcc 87  Q
    ||||||| ||||||||||||||||||||| |||| ||||||| |||||||| ||||||| ||||||||||||| ||||||    
T  12623015 tgcgtctttttcacacatttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgtgttagctttcc 12622936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 630246 - 630332
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    ||||| ||||||| ||||||||||||||||||||| |||| ||||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  630246 tgttcttgcgtctttttcacacatttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattttgttagctttcca 630332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 2424964 - 2425074
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| |||||||| |||| ||||||||| |  || ||||    
T  2424964 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgagttagctttccagtggctttagttt 2425063  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  2425064 gacttgaaaat 2425074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 14630535 - 14630433
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| |||||||||||||  |||||||| |  |||||||    
T  14630535 tgttcttgcgtctttttcacacgtttctgttttgatttggcctttggtgtaaacatgaaagttgtagataattgtgttagttttccagtggctttggttt 14630436  T
Q  102 gac 104  Q
    |||    
T  14630435 gac 14630433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 15117866 - 15117976
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| || | ||||||| |||||||| ||||||| ||||||||||||| ||||||||| |  | |||||    
T  15117866 tgttcttgcgtctttttcacacgtttctgttttgaattagcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagtggcgtcggttt 15117965  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  15117966 gacttgaaaat 15117976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 19610033 - 19609923
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| ||||||||||||||||||||| |||  ||||||| |||||||  ||||||| |||||||| |||| ||||||||| |  |||||||    
T  19610033 tgttcttgcgtctttttcacacatttctgttttgaattgacctttggtgtaaacataaaagttgtagataattgagttacctttccagtggctttggttt 19609934  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  19609933 gacttgaaaat 19609923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 42875507 - 42875398
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| |||||||  |||| ||||||||| |  |||||||    
T  42875507 tgttcttgcgtctttttcacacgtttctgttttgaattgg-ctttggtgtaaacatgaaagttgtagataattaagttagctttccagtggctttggttt 42875409  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  42875408 gacgtgaaaat 42875398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 44772597 - 44772707
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| || | ||||||| |||||||| ||||||| ||||||||| ||||||||||||| |  | |||||    
T  44772597 tgttcttgcgtctttttcacacgtttctgttttgaattagcctttggtgtaaacatgaaagttgtagataattgtattatctttccagtggcgtcggttt 44772696  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  44772697 gacttgaaaat 44772707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 46740907 - 46740797
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||| ||||| |||||||||    |||||||    
T  46740907 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattttgttagctttccagtgactttggttt 46740808  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  46740807 gacttgaaaat 46740797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 1837033 - 1837121
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagt 90  Q
    ||||| ||||||| |||||||| |||||||||||| || | ||||||| |||||||| ||||||| ||||||||||||| |||||||||    
T  1837033 tgttcttgcgtctttttcacacgtttctgttttgaattagcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagt 1837121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 18239126 - 18239214
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagt 90  Q
    ||||| ||||||| |||||||| |||||||||||| || | ||||||| |||||||| ||||||| ||||||||||||| |||||||||    
T  18239126 tgttcttgcgtctttttcacacgtttctgttttgaattagcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagt 18239214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 55582901 - 55582790
Alignment:
Q  1 gtgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtt 100  Q
    |||||| ||||||| |||| ||| |||||||||||| |||| ||||||| |||||||| ||||| | |||||| |||||| ||||||||| |  ||||||    
T  55582901 gtgttcttgcgtctgtttcgcacgtttctgttttgaattggcctttggtgtaaacatgaaagttttagataatcgtgttagctttccagtggctttggtt 55582802  T
Q  101 tgacgtgaaaat 112  Q
    |||| |||||||    
T  55582801 tgacttgaaaat 55582790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 7640700 - 7640810
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||| ||||||| || | ||||||| |||||||| ||||||| ||||||||||||| ||||||||| |  | |||||    
T  7640700 tgttcttgcgtctttttcacacgtttcagttttgaattagcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagtggcgtcggttt 7640799  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  7640800 gacttgaaaat 7640810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 11425654 - 11425544
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||| | |||| ||||||| |||||||| ||||||| ||| |||| |||| |||||||||||  |||||||    
T  11425654 tgttcttgcgtctttttcacacgtttctgttttaaattggcctttggtgtaaacatgaaagttgtagatgattgagttagctttccagtagctttggttt 11425555  T
Q  102 gacgtgaaaat 112  Q
     ||||| ||||    
T  11425554 tacgtgcaaat 11425544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 15011856 - 15011966
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||  ||||||| |||||||  |||| |||||| || |  |||||||    
T  15011856 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacataaaagttgtagataattaagttagctttcccgtggctttggttt 15011955  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  15011956 gacgtgaaaat 15011966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 33243639 - 33243725
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    ||||| ||| ||| ||||||||||||||||||||| |||| ||||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  33243639 tgttcttgcatctttttcacacatttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattttgttagctttcca 33243725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 35660555 - 35660445
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||| |||||||||||||||| ||||| | |||| || ||||| ||||||| | |  |||||||    
T  35660555 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtataaacatgaaagttttagatagttttgttagctttccaatggctttggttt 35660456  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  35660455 gacttgaaaat 35660445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 28385951 - 28385866
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  28385951 gttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattttgttagctttcca 28385866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 36038518 - 36038433
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| ||||||| |||||||  |||||||||||| |||||||||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  36038518 gttcttgcgtctttttcacatgtttctgttttgaattggtctttggtgtaaacatgaaagttgtagataattttgttagctttcca 36038433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 49547288 - 49547373
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  49547288 gttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattttgttagctttcca 49547373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 33849452 - 33849365
Alignment:
Q  1 gtgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||||| ||||||| |||||||| |||||||||||| ||||  |||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  33849452 gtgttcttgcgtctttttcacacgtttctgttttgaattggcatttggtgtaaacatgaaagttgtagataattttgttagctttcca 33849365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 3485617 - 3485539
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgtta 80  Q
    ||||| ||||||| ||||||||||||||||||||| ||   ||||||| |||||||| ||||||| |||||||||||||    
T  3485617 tgttcttgcgtctttttcacacatttctgttttgaattaacctttggtgtaaacatgaaagttgtagataattgtgtta 3485539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 14549335 - 14549225
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||   ||||||||||| |||| |||| || |||||||| ||||||| |||||||| |||| ||||||||| |  |||||||    
T  14549335 tgttcttgcgtctttttcacatgcttctgttttgaattggcctttagtgtaaacatgaaagttgtagataattgagttagctttccagtggctttggttt 14549236  T
Q  102 gacgtgaaaat 112  Q
    || ||||||||    
T  14549235 gatgtgaaaat 14549225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 15114931 - 15114821
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||| ||| ||||| || |||||||||||| |||| ||||||| |||||||| ||||||| |||||||  ||||  |||||||| |  |||||||    
T  15114931 tgttcttgcttctttttcatacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataatttagttagatttccagtggctttggttt 15114832  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  15114831 gacgtgaaaat 15114821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 15534822 - 15534744
Alignment:
Q  10 cgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    ||||| |||||||  |||||||||||| |||||||||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  15534822 cgtctttttcacatgtttctgttttgaattggtctttggtgtaaacatgaaagttgtagataattttgttagctttcca 15534744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 30147563 - 30147478
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||| | ||||||| ||||| |||||||    
T  30147563 gttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttttagataattttgttagctttcca 30147478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 47357317 - 47357224
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgac 104  Q
    |||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||| ||||| ||||| | | | |||||||||||    
T  47357317 gtctttttcacacgtttctgttttgaattggactttggtgtaaacatgaaagttgtagataattttgttagctttctaatggccttggtttgac 47357224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 112
Target Start/End: Original strand, 19435046 - 19435150
Alignment:
Q  8 tgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtg 107  Q
    ||||||| |||||||| |||||||||||| |||| |||| || |||||||| ||||||| ||||| | ||||| ||||||| | |  |||||||||| ||    
T  19435046 tgcgtctttttcacacgtttctgttttgaattggcctttagtgtaaacatgaaagttgtagataactttgttagctttccaatggctttggtttgacttg 19435145  T
Q  108 aaaat 112  Q
    |||||    
T  19435146 aaaat 19435150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 18247881 - 18247798
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttc 86  Q
    |||| ||||||| ||||||  ||||||||||||| |||| ||||||| |||||||| ||||||| ||||||| ||||| |||||    
T  18247881 gttcttgcgtctttttcacctatttctgttttgaattggactttggtgtaaacatgaaagttgtagataattttgttagctttc 18247798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 40230013 - 40229902
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgag-ttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtt 100  Q
    ||||| || |||| |||||||  ||||| ||||||  |||| ||||||| |||||||| ||||||| ||||||||||||| ||||||||| |  ||||||    
T  40230013 tgttcttgtgtctttttcacatgtttctattttgaaattggcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagtggctttggtt 40229914  T
Q  101 tgacgtgaaaat 112  Q
    |||| |||||||    
T  40229913 tgacttgaaaat 40229902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 14873614 - 14873688
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagt 90  Q
    |||||||  |||||||||||| || | ||||||| |||||||| ||||||| ||||||||||||| |||||||||    
T  14873614 tttcacatgtttctgttttgaattagcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagt 14873688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 19081684 - 19081770
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    ||||| ||| ||| ||||||||||||||||||||  |||| ||||||| |||||||| ||||| | ||||| || ||||||||||||    
T  19081684 tgttcttgcatctttttcacacatttctgttttggattggcctttggtgtaaacatgaaagttttagataaatgagttatctttcca 19081770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 44023947 - 44024057
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||   |||||| |||||| | ||||||| |||||||||||||  ||||| || |  |||||||    
T  44023947 tgttcttgcgtctttttcacacgtttctgttttgaattgccatttggtgtaaacaggaaagttgtagataattgtgttagatttcccgtggctttggttt 44024046  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  44024047 gacttgaaaat 44024057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 18213266 - 18213189
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||| | ||||||| ||||| |||||||    
T  18213266 gtctttttcacacgtttctgttttgaattggactttggtgtaaacatggaagttttagataattttgttagctttcca 18213189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 8374182 - 8374099
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttc 86  Q
    |||| ||| ||| ||||||  ||||||||||||| |||| ||||||| |||||||| ||||||| ||||||| ||||| |||||    
T  8374182 gttcttgcatctttttcacctatttctgttttgaattggactttggtgtaaacatgaaagttgtagataattttgttaactttc 8374099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 112
Target Start/End: Original strand, 24046900 - 24046987
Alignment:
Q  25 tttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    |||||||||||| |||  ||||||| |||||||| ||||||| ||||||| ||||| ||||||| | |  |||||||||| |||||||    
T  24046900 tttctgttttgaattgacctttggtgtaaacatgaaagttgtagataattttgttagctttccaatggctttggtttgacttgaaaat 24046987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 9923905 - 9923795
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| ||||  ||||||  |||  |||||| |||||||| ||||||| ||||||||||||| |||||| || |  || ||||    
T  9923905 tgttcttgcgtctttttcacacgtttccattttgaactgggttttggtgtaaacatgaaagttgtagataattgtgttagctttccggtggctttagttt 9923806  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  9923805 gacttgaaaat 9923795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 11478954 - 11479064
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| || |||| |||||||  |||| |||||||  |||  |||||| |||||||  ||||||| ||||||||||||| ||||||||| |  |||||||    
T  11478954 tgttcttgtgtctttttcacatgtttccgttttgaactgggttttggtgtaaacatagaagttgtagataattgtgttagctttccagtggctttggttt 11479053  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  11479054 gacttgaaaat 11479064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 106
Target Start/End: Complemental strand, 19020130 - 19020048
Alignment:
Q  24 atttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgt 106  Q
    ||||||||||||| |||| ||||||| |||||||| ||||| | ||||||| ||||| ||||| | | || ||||||||||||    
T  19020130 atttctgttttgaattggactttggtgtaaacatgaaagttttagataattttgttagctttctaatggttttggtttgacgt 19020048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 19566262 - 19566372
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||| ||| |||||||  |||||||||||| || | |||| || |||||||| ||||| | ||||||||||||| ||||||||| |  |||||||    
T  19566262 tgttcttgcatctttttcacatgtttctgttttgaattagccttttgtgtaaacatgaaagttttagataattgtgttagctttccagtggctttggttt 19566361  T
Q  102 gacgtgaaaat 112  Q
    ||  |||||||    
T  19566362 gaattgaaaat 19566372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 25513451 - 25513365
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    ||||| ||||| | ||| |||| ||| |||||||| |||| ||||||| |||| ||| ||||||| ||||||||||||| |||||||    
T  25513451 tgttcttgcgtttttttgacacgtttatgttttgaattggcctttggtgtaaatatgaaagttgtagataattgtgttagctttcca 25513365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 53387280 - 53387390
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| ||||||   |||||| |||||  |||  |||||| |||||||| ||||||| ||||||| ||||| ||||||| | |  |||||||    
T  53387280 tgttcttgcgtctgtttcacgtgtttctgctttgaactgggttttggtgtaaacatgaaagttgtagataattttgttagctttccaatggatttggttt 53387379  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  53387380 gacgtgaaaat 53387390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 10643888 - 10643787
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||| ||| ||||||  ||||||||||||| |||| |||||||  ||||||| ||||||| ||||||| ||||| ||||| | | || ||||||||    
T  10643888 gttcttgcatctttttcacctatttctgttttgaattggactttggtgcaaacatgaaagttgtagataattatgttagctttctaatggttttggtttg 10643789  T
Q  103 ac 104  Q
    ||    
T  10643788 ac 10643787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 16731810 - 16731741
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgtta 80  Q
    |||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||| | ||||||| |||||    
T  16731810 gtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttttagataattatgtta 16731741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 14995786 - 14995703
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttc 86  Q
    |||| ||||||| ||||||   |||||||||||| |||| ||||||| |||||||| ||||| | ||||||| ||||| |||||    
T  14995786 gttcttgcgtctttttcacctttttctgttttgaattggcctttggtgtaaacatgaaagttttagataattttgttagctttc 14995703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 15287826 - 15287897
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataatt 74  Q
    |||| ||| ||| ||||||  ||||||||||||| |||| ||||||| |||||||| ||||||| |||||||    
T  15287826 gttcttgcatctttttcacctatttctgttttgaattggactttggtgtaaacatgaaagttgtagataatt 15287897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 15294936 - 15295007
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataatt 74  Q
    |||| ||| ||| ||||||  ||||||||||||| |||| ||||||| |||||||| ||||||| |||||||    
T  15294936 gttcttgcatctttttcacctatttctgttttgaattggactttggtgtaaacatgaaagttgtagataatt 15295007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 112
Target Start/End: Complemental strand, 15344561 - 15344474
Alignment:
Q  25 tttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    |||||||||||| || |  || ||| |||||||| ||||| | ||||||||||||| ||||||||| |  |||||||||| |||||||    
T  15344561 tttctgttttgaatttgctttcggtgtaaacatgaaagttttagataattgtgttagctttccagtggctttggtttgacttgaaaat 15344474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 19697938 - 19698017
Alignment:
Q  1 gtgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgtta 80  Q
    |||||| ||||||| ||||||  |||||| |||||| |||| |||| || |||||||| ||||| | |||||||||||||    
T  19697938 gtgttcttgcgtctttttcacctatttctattttgaattggcctttcgtgtaaacatgaaagttttagataattgtgtta 19698017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 19708523 - 19708602
Alignment:
Q  1 gtgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgtta 80  Q
    |||||| ||||||| ||||||  |||||| |||||| |||| |||| || |||||||| ||||| | |||||||||||||    
T  19708523 gtgttcttgcgtctttttcacctatttctattttgaattggcctttcgtgtaaacatgaaagttttagataattgtgtta 19708602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 106
Target Start/End: Original strand, 5683336 - 5683426
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgt 106  Q
    |||||| |||||| ||||||| ||| | |||||| |||||||| ||||| | | ||||| ||||| ||||||| | || ||||||||||||    
T  5683336 tttcacccatttccgttttgaattgatttttggtgtaaacatgaaagttttaggtaattttgttagctttccaatggttttggtttgacgt 5683426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 14049226 - 14049140
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    ||||| ||||||  || ||||| |||||||||||| ||||  |||||| |||||||| |||||||  |||||| ||||| |||||||    
T  14049226 tgttcttgcgtcgtttacacacgtttctgttttgaattggcatttggtgtaaacatgaaagttgtatataattttgttagctttcca 14049140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 86
Target Start/End: Original strand, 22355048 - 22355110
Alignment:
Q  24 atttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttc 86  Q
    ||||||||||||| || | ||||||| |||||||| ||||||| ||||||| ||||| |||||    
T  22355048 atttctgttttgattttgactttggtgtaaacatgaaagttgtagataattttgttagctttc 22355110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 104
Target Start/End: Original strand, 18108262 - 18108323
Alignment:
Q  43 ctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgac 104  Q
    ||||||| |||||||| ||||||| |||||||||||||  |||||||| || | ||||||||    
T  18108262 ctttggtgtaaacatgaaagttgtagataattgtgttagatttccagtggtgtcggtttgac 18108323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 104
Target Start/End: Original strand, 45314722 - 45314782
Alignment:
Q  44 tttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgac 104  Q
    |||||| |||||||| ||||||| |||||||||||||  |||||||| |  ||||||||||    
T  45314722 tttggtgtaaacatgaaagttgtagataattgtgttagatttccagtggctttggtttgac 45314782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 56115193 - 56115265
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| ||| |||||||||||| |||  ||| ||| |||||||| ||||||| ||||||| ||||| |||||||    
T  56115193 tttcgcacgtttctgttttgaattgaccttgggtgtaaacatgaaagttgtagataattttgttagctttcca 56115265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 127; Significance: 1e-65; HSPs: 115)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 3 - 235
Target Start/End: Original strand, 3161265 - 3161494
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| |||||||||||||||| |||||||||| ||||||||||| || |||||||| |  |||||||||| |||||| ||||||||||||||||||||||    
T  3161265 gttcttgcgtctatttcacacgtttctgttttaagttggtctttagtgtaaacatgaatattgttgataactgtgttgtctttccagtagtcttggtttg 3161364  T
Q  103 acgtgaaaatcttttgtgtataatttaacannnnnnnnnatgaagatgtatgaatgaattattgttgttaaatatgatgtctatatgatgttattcatgg 202  Q
    || ||||||||||||||| |||||||||||         |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  3161365 acatgaaaatcttttgtggataatttaacatgtttttaca--aagatgtatgaatgaattattgttgttaaatatgatgtctatatgatgttattcat-g 3161461  T
Q  203 ttgatgaatagtgagattatgttgcgaagttga 235  Q
    || |||||| ||||||||||| |||||||||||    
T  3161462 ttaatgaattgtgagattatgatgcgaagttga 3161494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 12151344 - 12151458
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaatctt 115  Q
    ||||||||||||||||||||| |||  ||||||| |||||||| ||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||    
T  12151344 tttcacacatttctgttttgatttgacctttggtgtaaacatgaaagttgttgataattgtgttatctttctagtagccttgctttgacgtgaaaatctt 12151443  T
Q  116 ttgtgtataatttaa 130  Q
    ||||| |||||||||    
T  12151444 ttgtggataatttaa 12151458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 8 - 117
Target Start/End: Original strand, 15025733 - 15025842
Alignment:
Q  8 tgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtg 107  Q
    ||||||| ||||| || |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||    
T  15025733 tgcgtctgtttcatacgtttctgttttgaattggtctttggtataaacatgaaagttgttgataattgtgttatctttccagtagtcttggtttggcatg 15025832  T
Q  108 aaaatctttt 117  Q
    ||||| ||||    
T  15025833 aaaatatttt 15025842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 3 - 116
Target Start/End: Original strand, 21846027 - 21846140
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| |||||||| ||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||| ||||| ||||    
T  21846027 gttcttgcgtctgtttcacacgtttctgttttgagttggtcttcggtgtaaacatgaaagttgttgataattgtgttatctttccagtattcttgatttg 21846126  T
Q  103 acgtgaaaatcttt 116  Q
    | ||||| ||||||    
T  21846127 atgtgaatatcttt 21846140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 29907201 - 29907072
Alignment:
Q  1 gtgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtt 100  Q
    |||||| ||||||| ||||| |||||||| |||||| || |||||| ||||||||||| |||||| ||||||||||||||||||||||||||  || |||    
T  29907201 gtgttcttgcgtctgtttcatacatttctattttgaattagtcttttgtataaacatgaaagttgctgataattgtgttatctttccagtagcttttgtt 29907102  T
Q  101 tgacgtgaaaatcttttgtgtataatttaa 130  Q
    |||| ||||||||||||||| |||||||||    
T  29907101 tgacctgaaaatcttttgtggataatttaa 29907072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 29948367 - 29948238
Alignment:
Q  1 gtgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtt 100  Q
    |||||| ||||||| ||||| |||||||| |||||| || |||||| ||||||||||| |||||| ||||||||||||||||||||||||||  || |||    
T  29948367 gtgttcttgcgtctgtttcatacatttctattttgaattagtcttttgtataaacatgaaagttgctgataattgtgttatctttccagtagcttttgtt 29948268  T
Q  101 tgacgtgaaaatcttttgtgtataatttaa 130  Q
    |||| ||||||||||||||| |||||||||    
T  29948267 tgacctgaaaatcttttgtggataatttaa 29948238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 29997521 - 29997392
Alignment:
Q  1 gtgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtt 100  Q
    |||||| ||||||| ||||| |||||||| |||||| || |||||| ||||||||||| |||||| ||||||||||||||||||||||||||  || |||    
T  29997521 gtgttcttgcgtctgtttcatacatttctattttgaattagtcttttgtataaacatgaaagttgctgataattgtgttatctttccagtagcttttgtt 29997422  T
Q  101 tgacgtgaaaatcttttgtgtataatttaa 130  Q
    |||| ||||||||||||||| |||||||||    
T  29997421 tgacctgaaaatcttttgtggataatttaa 29997392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 3 - 116
Target Start/End: Original strand, 48044091 - 48044204
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| |||||||| |||||||||||||||| |||| ||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  48044091 gttcttgcgtctgtttcacacgtttctgttttgagttgatcttcggtgtaaacatgaaagttgttgataattgtgttatctttccagcagtcttggtttg 48044190  T
Q  103 acgtgaaaatcttt 116  Q
    | ||||| ||||||    
T  48044191 atgtgaatatcttt 48044204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 3 - 130
Target Start/End: Complemental strand, 48630834 - 48630707
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||| ||| |||||||| ||||||||||||||||  |||| || |||||||| ||||| |||||||||||||||||||| |||||| |||||||||    
T  48630834 gttcttgcatctgtttcacacgtttctgttttgagttgacctttagtgtaaacatgaaagttattgataattgtgttatcttttcagtagccttggtttg 48630735  T
Q  103 acgtgaaaatcttttgtgtataatttaa 130  Q
    ||||||||| |||||||| |||||||||    
T  48630734 acgtgaaaaacttttgtggataatttaa 48630707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 25201575 - 25201462
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||  |||||||| ||||| |||||||||||| || ||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  25201575 gttcttgcgtcagtttcacacgtttctattttgagttggttttcggtgtaaacatgaaagttgttgataattgtgttatctttccagtagtcttggtttg 25201476  T
Q  103 acgtgaaaatcttt 116  Q
    | ||||| ||||||    
T  25201475 atgtgaatatcttt 25201462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 130
Target Start/End: Complemental strand, 12540966 - 12540839
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||| | ||||| || |||||||||||| || |||||| ||||||||||| ||||| ||||||||||||||||||||||| ||| ||||| |||    
T  12540966 gttcttgcgtttgtttcatacgtttctgttttgaattagtcttttgtataaacatgaaagttattgataattgtgttatctttccaatagccttgggttg 12540867  T
Q  103 acgtgaaaatcttttgtgtataatttaa 130  Q
    || ||||||||||||||| |||||||||    
T  12540866 acatgaaaatcttttgtggataatttaa 12540839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 126
Target Start/End: Original strand, 12917978 - 12918101
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| |||||||| ||||||||||||||||| |||| || |||| ||| ||||| ||||||||||||||||||| | ||||| |||||||||    
T  12917978 gttcttgcgtctgtttcacacgtttctgttttgagttggcctttagtgtaaatatgaaagttattgataattgtgttatcttgctagtagccttggtttg 12918077  T
Q  103 acgtgaaaatcttttgtgtataat 126  Q
    || ||||||||||||||| |||||    
T  12918078 acatgaaaatcttttgtggataat 12918101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 45803997 - 45804114
Alignment:
Q  8 tgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtg 107  Q
    ||||||| |||| ||| ||||||||||||||||  |||| || |||| ||| ||||| || |||||||||||||||||||||||| ||||||||||| ||    
T  45803997 tgcgtctgtttcgcacgtttctgttttgagttgacctttagtgtaaatatgaaagttatttataattgtgttatctttccagtagccttggtttgacatg 45804096  T
Q  108 aaaatcttttgtgtataa 125  Q
    ||||||||||||| ||||    
T  45804097 aaaatcttttgtggataa 45804114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 3527820 - 3527947
Alignment:
Q  1 gtgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtt 100  Q
    |||||| ||||| | |||||||| ||| ||||||||||||| ||| ||| |||| ||| || || ||||||||||||||||||||||| ||| |||||||    
T  3527820 gtgttcttgcgtgtgtttcacacgtttatgttttgagttggcctt-ggtgtaaatatgaaaattattgataattgtgttatctttccaatagccttggtt 3527918  T
Q  101 tgacgtgaaaatcttttgtgtataattta 129  Q
    ||||||||||| |||||||| ||||||||    
T  3527919 tgacgtgaaaaccttttgtggataattta 3527947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 130
Target Start/End: Original strand, 12155377 - 12155504
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| ||||||| |||| |||||||| |||  ||||||  |||||||| ||||||||||||||||||||||| ||||||||  | |||||||    
T  12155377 gttcttgcgtctttttcacatatttatgttttgatttgacctttggggtaaacatgaaagttgttgataattgtgttatccttccagtaaccgtggtttg 12155476  T
Q  103 acgtgaaaatcttttgtgtataatttaa 130  Q
    || ||||||| ||||||| |||||||||    
T  12155477 acatgaaaatattttgtgaataatttaa 12155504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 24546549 - 24546439
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||||||||| ||||||||| |  |||||||    
T  24546549 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagtggctttggttt 24546450  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  24546449 gacttgaaaat 24546439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 35354311 - 35354201
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| |||||||| |||| ||||||||| |  |||||||    
T  35354311 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgagttagctttccagtggctttggttt 35354212  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  35354211 gacgtgaaaat 35354201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 40807705 - 40807595
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| |||||||| |||| ||||||||| |  |||||||    
T  40807705 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgagttagctttccagtggctttggttt 40807606  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  40807605 gacgtgaaaat 40807595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 40812542 - 40812432
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| |||||||| |||| ||||||||| |  |||||||    
T  40812542 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgagttagctttccagtggctttggttt 40812443  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  40812442 gacgtgaaaat 40812432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 54875826 - 54875936
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| |||||||| |||| ||||||||| |  |||||||    
T  54875826 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgagttagctttccagtggagttggttt 54875925  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  54875926 gacgtgaaaat 54875936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 5205997 - 5206107
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||||||||||| |||||||| ||||||| |||||||| ||||  |||||||| |  |||||||    
T  5205997 tgttcttgcgtctttttcacacgtttctgttttgaattggtctttggtgtaaacatgaaagttgtagataattgagttagatttccagtggctttggttt 5206096  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  5206097 gacatgaaaat 5206107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 112
Target Start/End: Complemental strand, 15465795 - 15465693
Alignment:
Q  10 cgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaa 109  Q
    ||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||||||||| ||||||||| |  |||||||||| ||||    
T  15465795 cgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagtggctttggtttgacatgaa 15465696  T
Q  110 aat 112  Q
    |||    
T  15465695 aat 15465693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 112
Target Start/End: Original strand, 35064932 - 35065034
Alignment:
Q  10 cgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaa 109  Q
    ||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| |||||||| |||| ||||||||| |  |||||||||||||||    
T  35064932 cgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgagttagctttccagtggctttggtttgacgtgaa 35065031  T
Q  110 aat 112  Q
    |||    
T  35065032 aat 35065034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 5215355 - 5215246
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||| || |||| ||||||||| |  ||||||||    
T  5215355 gttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataaatgagttagctttccagtggctttggtttg 5215256  T
Q  103 acgtgaaaat 112  Q
    ||||||||||    
T  5215255 acgtgaaaat 5215246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 112
Target Start/End: Complemental strand, 11259133 - 11259029
Alignment:
Q  8 tgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtg 107  Q
    ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| |||||||| |||| ||||||||| |  ||||||||| |||    
T  11259133 tgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgagttagctttccagtggctttggtttgatgtg 11259034  T
Q  108 aaaat 112  Q
    |||||    
T  11259033 aaaat 11259029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 6156415 - 6156304
Alignment:
Q  1 gtgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtt 100  Q
    |||||| ||||||| |||| ||| |||||||||||| |||||||||||| |||||||| || || | ||||||||||||| ||||||||| |  ||||||    
T  6156415 gtgttcttgcgtctgtttcgcacgtttctgttttgaattggtctttggtgtaaacatggaaattttagataattgtgttagctttccagtggcgttggtt 6156316  T
Q  101 tgacgtgaaaat 112  Q
    |||| |||||||    
T  6156315 tgacttgaaaat 6156304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 2841806 - 2841916
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| || |||| ||||||||| ||||||||||| |||| ||||||| |||||||| ||||| | |||||||| |||| ||||||||| |  |||||||    
T  2841806 tgttcttgtgtctttttcacacacttctgttttgaattggcctttggtgtaaacatgaaagttttagataattgagttagctttccagtggctttggttt 2841905  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  2841906 gacgtgaaaat 2841916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 12511557 - 12511447
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| || ||||||||| |||||||| ||||||| |||||||| ||||  |||||||| |  |||||||    
T  12511557 tgttcttgcgtctttttcacacgtttctgttttgaatttgtctttggtgtaaacatgaaagttgtagataattgagttagatttccagtggctttggttt 12511458  T
Q  102 gacgtgaaaat 112  Q
    || ||||||||    
T  12511457 gatgtgaaaat 12511447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 17519216 - 17519326
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| | ||||||  ||| ||||||||| |  |||||||    
T  17519216 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtaggtaattgacttagctttccagtggctttggttt 17519315  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  17519316 gacgtgaaaat 17519326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 17534078 - 17534188
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| | ||||||  ||| ||||||||| |  |||||||    
T  17534078 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtaggtaattgacttagctttccagtggctttggttt 17534177  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  17534178 gacgtgaaaat 17534188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 17670052 - 17670162
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| ||| |||||||| |||| ||||||| |||||||| ||||||| |||||||| |||| |||| |||| |  |||||||    
T  17670052 tgttcttgcgtctttttcacacgtttttgttttgaattggcctttggtgtaaacatgaaagttgtagataattgagttagcttttcagtggcgttggttt 17670151  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  17670152 gacgtgaaaat 17670162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 22306926 - 22307036
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||| ||| |||||| |||||||||||||| |||| ||||||| |||||||| ||||||| |||||||  ||||||||||||||    |||||||    
T  22306926 tgttcttgcatctttttcacccatttctgttttgaattggcctttggtgtaaacatgaaagttgtagataatttagttatctttccagtgactttggttt 22307025  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  22307026 gacgtgaaaat 22307036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 22763973 - 22764083
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| || |||| |||||||| |||||||||||| |||||||||||| |||||||| ||||| | |||||||| |||| |||| |||| |  |||||||    
T  22763973 tgttcttgtgtctttttcacacgtttctgttttgaattggtctttggtgtaaacatgaaagttatagataattgagttagcttttcagtggctttggttt 22764072  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  22764073 gacgtgaaaat 22764083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 34159974 - 34159864
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| || | ||||||| |||||||| ||||||| ||||||||||||| ||||||||| |  | |||||    
T  34159974 tgttcttgcgtctttttcacacgtttctgttttgaattagcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagtggcgtcggttt 34159875  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  34159874 gacttgaaaat 34159864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 43889142 - 43889252
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||  |||||||||||| |||| ||||| | |||||||| ||||||| |||||||| |||| ||||||||| |  |||||||    
T  43889142 tgttcttgcgtctttttcacatgtttctgttttgaattggcctttgatgtaaacatgaaagttgtagataattgagttagctttccagtggctttggttt 43889241  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  43889242 gacgtgaaaat 43889252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 55477139 - 55477029
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| || | ||||||| |||||||| ||||||| ||||||||||||| ||||||||| |  | |||||    
T  55477139 tgttcttgcgtctttttcacacgtttctgttttgaattagcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagtggcgtcggttt 55477040  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  55477039 gacttgaaaat 55477029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 17685187 - 17685296
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||| ||| |||||||| |||||||||||| |||| ||||||| |||||||| || |||| |||||||| |||| ||||||||| |  ||||||||    
T  17685187 gttcttgcatctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaaattgtagataattgagttagctttccagtggcgttggtttg 17685286  T
Q  103 acgtgaaaat 112  Q
    ||||||||||    
T  17685287 acgtgaaaat 17685296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 17208049 - 17207961
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagt 90  Q
    ||||| ||| ||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||||||||| |||||||||    
T  17208049 tgttcttgcatctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagt 17207961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 45606420 - 45606508
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagt 90  Q
    ||||| ||||||| |||||||| |||||||||||| || | ||||||| |||||||| ||||||| ||||||||||||| |||||||||    
T  45606420 tgttcttgcgtctttttcacacgtttctgttttgaattagcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagt 45606508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 42237 - 42150
Alignment:
Q  1 gtgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  42237 gtgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattttgttagctttcca 42150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 8928007 - 8928118
Alignment:
Q  1 gtgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtt 100  Q
    |||||| ||||||| |||||||  |||||||||||| ||||||||||||||||||||  ||||||| ||||||| |||||  |||||| | |  ||||||    
T  8928007 gtgttcttgcgtctttttcacatgtttctgttttgaattggtctttggtataaacataaaagttgtagataattttgttagatttccaatggctttggtt 8928106  T
Q  101 tgacgtgaaaat 112  Q
    |||| |||||||    
T  8928107 tgacctgaaaat 8928118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 26054779 - 26054866
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagt 90  Q
    |||| ||||||| |||||||| |||| ||||||| |||| ||||||| |||||||| ||||||| ||||||||||||| |||||||||    
T  26054779 gttcttgcgtctttttcacacgtttcagttttgaattggcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagt 26054866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 112
Target Start/End: Original strand, 6468656 - 6468758
Alignment:
Q  10 cgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaa 109  Q
    ||||| |||||||| |||||||||||| || | ||||||| |||||||| ||||||| ||||||||||||| ||||||||| || |  ||||||| ||||    
T  6468656 cgtctttttcacacgtttctgttttgacttagcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagtggtgtccgtttgacttgaa 6468755  T
Q  110 aat 112  Q
    |||    
T  6468756 aat 6468758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 10541801 - 10541911
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||  |||| ||||||| || | ||||||| |||||||| ||||||| ||||||||||||||||||||||| |  | |||||    
T  10541801 tgttcttgcgtctttttcacatgtttccgttttgaattagcctttggtgtaaacatgaaagttgtagataattgtgttatctttccagtggcgtcggttt 10541900  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  10541901 gacttgaaaat 10541911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 10563418 - 10563308
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| || ||||| |||||||||||| |||| ||||||| |||||||| ||||||  |||||||| |||| ||||||||| |  |||||||    
T  10563418 tgttcttgcgtcttttgcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgcagataattgagttagctttccagtggctttggttt 10563319  T
Q  102 gacgtgaaaat 112  Q
    || ||||||||    
T  10563318 gatgtgaaaat 10563308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 14508556 - 14508446
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| ||| |||||||| |||| ||||||| |||||||| ||||||| |||||||| |||| ||||||  | |  |||||||    
T  14508556 tgttcttgcgtctttttcacacgtttatgttttgaattggcctttggtgtaaacatgaaagttgtagataattgagttagctttcctatggctttggttt 14508457  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  14508456 gacgtgaaaat 14508446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 112
Target Start/End: Complemental strand, 14519955 - 14519861
Alignment:
Q  18 tcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    |||||| |||||||||||| |||  ||||||| |||||||| ||||||| ||||||||||||| ||||||||| |  |||||||||| |||||||    
T  14519955 tcacacgtttctgttttgaattgacctttggtgtaaacatgaaagttgtagataattgtgttagctttccagtggcattggtttgacttgaaaat 14519861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 17463826 - 17463716
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| || | ||||||| |||||||| ||||||| ||||||||||||| |||| |||| |  | |||||    
T  17463826 tgttcttgcgtctttttcacacgtttctgttttgaattagcctttggtgtaaacatgaaagttgtagataattgtgttagctttacagtggcgtcggttt 17463727  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  17463726 gacttgaaaat 17463716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 28848135 - 28848221
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    ||||| ||||||| |||||||| |||||||||||| || ||||||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  28848135 tgttcttgcgtctttttcacacgtttctgttttgaattagtctttggtgtaaacatgaaagttgtagataattttgttagctttcca 28848221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 43550020 - 43550130
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||| |||||  |||||| | |  |||||||    
T  43550020 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattttgttaattttccaatggctttggttt 43550119  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  43550120 gacttgaaaat 43550130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 49900445 - 49900335
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| ||||| |||||| |||| ||||||| |||||||| ||||||| |||||||  |||| |||| |||| |  |||||||    
T  49900445 tgttcttgcgtctttttcacacgtttctattttgaattggcctttggtgtaaacatgaaagttgtagataattaagttagcttttcagtggatttggttt 49900346  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  49900345 gacgtgaaaat 49900335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 50348369 - 50348479
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||  |||| ||||||| |||||||  ||||||| |||||||| |||| ||||||||| |  || ||||    
T  50348369 tgttcttgcgtctttttcacacgtttctgttttgtattggcctttggtgtaaacataaaagttgtagataattgagttagctttccagtggctttagttt 50348468  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  50348469 gacgtgaaaat 50348479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 129
Target Start/End: Original strand, 3264851 - 3264972
Alignment:
Q  8 tgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtg 107  Q
    ||||||| |||||||  ||| |||| ||| || |||||||||||||||||| ||| |||||||||||||| ||||||| ||||||  |||||||| | ||    
T  3264851 tgcgtctgtttcacatgtttttgttctgaattagtctttggtataaacatgaaagatgttgataattgtgatatcttttcagtagctttggtttggcatg 3264950  T
Q  108 aaaatcttttgtgtataattta 129  Q
    ||||| | |||||  |||||||    
T  3264951 aaaatatgttgtggttaattta 3264972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 5224031 - 5223922
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| |||||||  |||||||||||| |||| |||||||  ||||||| ||||||| |||| |||||||| ||||||||| |  ||||||||    
T  5224031 gttcttgcgtctttttcacatgtttctgttttgaattggcctttggtgcaaacatgaaagttgtagatagttgtgttagctttccagtggctttggtttg 5223932  T
Q  103 acgtgaaaat 112  Q
    || |||||||    
T  5223931 acatgaaaat 5223922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 12305770 - 12305685
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| ||||||| |||||||  |||||||||||| |||||||||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  12305770 gttcttgcgtctttttcacatgtttctgttttgaattggtctttggtgtaaacatgaaagttgtagataattttgttagctttcca 12305685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 14152742 - 14152851
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||| ||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| |||  |||||||| ||||||||| |  |||||||    
T  14152742 tgttcttgcatctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagatttttgtgttagctttccagtggctttggttt 14152841  T
Q  102 gacgtgaaaa 111  Q
    ||| ||||||    
T  14152842 gacttgaaaa 14152851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 16979618 - 16979509
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| |||||||| ||| | |||||| |||| ||||||| |||||||| ||||||| ||||||||||||| ||||| ||| |  ||||||||    
T  16979618 gttcttgcgtctttttcacacgtttatattttgaattggcctttggtgtaaacatgaaagttgtagataattgtgttagctttctagtggctttggtttg 16979519  T
Q  103 acgtgaaaat 112  Q
    || |||||||    
T  16979518 acttgaaaat 16979509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 18739603 - 18739518
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| ||||||| ||||||  ||||||||||||| |||||||||||| |||||||| ||||| | ||||||||||||| |||||||    
T  18739603 gttcttgcgtctttttcacttatttctgttttgaattggtctttggtgtaaacatgaaagttttagataattgtgttagctttcca 18739518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 40039701 - 40039802
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaatctt 115  Q
    |||||| |||||||||||||| |||||||||||| |||||||| ||||| | ||||||| |||||||||| || | |  |||||||||| ||||||| ||    
T  40039701 tttcacccatttctgttttgaattggtctttggtgtaaacatgaaagttttagataattttgttatcttttcaatggatttggtttgacttgaaaatatt 40039800  T
Q  116 tt 117  Q
    ||    
T  40039801 tt 40039802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 54521470 - 54521385
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  54521470 gttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattttgttagctttcca 54521385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 13151304 - 13151392
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagt 90  Q
    ||||| ||| ||| |||||||| |||||||||||| || | ||||||| |||||||| ||||||| ||||||||||||| |||||||||    
T  13151304 tgttcttgcatctttttcacacgtttctgttttgaattagcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagt 13151392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 112
Target Start/End: Complemental strand, 14441871 - 14441767
Alignment:
Q  8 tgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtg 107  Q
    ||||||| |||||||| ||| |||||||| |||| ||||||| |||||||| ||||||| |||||||| ||||  ||||||||    |||||||||||||    
T  14441871 tgcgtctttttcacacgtttttgttttgaattggcctttggtgtaaacatgaaagttgtagataattgagttagttttccagtgactttggtttgacgtg 14441772  T
Q  108 aaaat 112  Q
    |||||    
T  14441771 aaaat 14441767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 15413079 - 15412991
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagt 90  Q
    ||||| ||||||| |||||||| ||| |||||||| || | ||||||| |||||||| ||||||| ||||||||||||| |||||||||    
T  15413079 tgttcttgcgtctttttcacacgtttttgttttgaattagcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagt 15412991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 112
Target Start/End: Original strand, 16324890 - 16324994
Alignment:
Q  8 tgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtg 107  Q
    ||||||| |||||||| |||||||||||| ||||  |||||| |||||| | ||||||| ||||||| ||||||||||||| | |  |||||||| ||||    
T  16324890 tgcgtctttttcacacgtttctgttttgaattggcatttggtgtaaacaggaaagttgtagataattttgttatctttccaatggatttggtttggcgtg 16324989  T
Q  108 aaaat 112  Q
    |||||    
T  16324990 aaaat 16324994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 41 - 129
Target Start/End: Complemental strand, 36527995 - 36527907
Alignment:
Q  41 gtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaatcttttgtgtataattta 129  Q
    |||||||||||||||||| ||| |||||||||||||| ||||||||||||||  |||||||| | || |||||| |||||  |||||||    
T  36527995 gtctttggtataaacatgaaagatgttgataattgtgatatctttccagtagctttggtttggcatgcaaatctgttgtggttaattta 36527907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 11913430 - 11913344
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    ||||| ||||||| |||||||| ||||||||||||||||  |||| || |||||||| ||||||| ||||||| ||||| |||||||    
T  11913430 tgttcttgcgtctttttcacacgtttctgttttgagttgacctttagtgtaaacatgaaagttgtagataattttgttagctttcca 11913344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 12470511 - 12470401
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| || ||||| |||||||||||| |||||||||||| |||||||| ||||||| ||||||||   | |||||| ||| |  ||| |||    
T  12470511 tgttcttgcgtcttttgcacacgtttctgttttgaattggtctttggtgtaaacatgaaagttgtagataattgaaatttctttctagtggctttgattt 12470412  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  12470411 gacgtgaaaat 12470401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 14647446 - 14647532
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| | |||||| ||||||| ||||||| ||||| |||||||    
T  14647446 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtgaacatgaaagttgtagataattttgttagctttcca 14647532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 15566208 - 15566134
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagt 90  Q
    |||||||| ||||||||||||||| | ||||||  |||||||| ||||||| ||||||||||||| |||||||||    
T  15566208 tttcacacgtttctgttttgagttagcctttggcgtaaacatgaaagttgtagataattgtgttagctttccagt 15566134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 31224296 - 31224406
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| ||| |||||||| |||  ||||||| |||||||| ||||| | ||||||||||||| ||||| ||| || |||||||    
T  31224296 tgttcttgcgtctttttcacacgtttttgttttgaattgacctttggtgtaaacatgaaagttttagataattgtgttagctttctagtggtattggttt 31224395  T
Q  102 gacgtgaaaat 112  Q
     || |||||||    
T  31224396 cacttgaaaat 31224406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 46722969 - 46723079
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| || |||| ||| |||| ||||| |||||| |||| ||||||| |||||||| ||||||| ||||||| ||||| ||||||| | |  |||||||    
T  46722969 tgttcttgtgtcttttttacacgtttctattttgaattggcctttggtgtaaacatgaaagttgtagataattttgttagctttccaatggctttggttt 46723068  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  46723069 gacgtgaaaat 46723079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 51602943 - 51603029
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    ||||| |||| || |||||||| ||||||||||||||||  ||||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  51602943 tgttcttgcgactttttcacacgtttctgttttgagttgacctttggtgtaaacatgaaagttgtagataattttgttagctttcca 51603029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 55291984 - 55292094
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||  ||||| |||||| |||| ||||||| | |||||| ||||||| ||||||| ||||| ||||||| | |  |||||||    
T  55291984 tgttcttgcgtctttttcacaggtttctattttgaattggcctttggtgtgaacatgaaagttgtagataattttgttagctttccaatggctttggttt 55292083  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  55292084 gacgtgaaaat 55292094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 14763313 - 14763390
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  14763313 gtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattttgttagctttcca 14763390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 54330650 - 54330759
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| |||||||| ||| |||||||| |||  ||||||| || ||||| ||||||| ||||||||||||| ||||||||| |  ||||||||    
T  54330650 gttcttgcgtctttttcacacgtttatgttttgaattgacctttggtgtagacatgaaagttgtagataattgtgttagctttccagtggctttggtttg 54330749  T
Q  103 acgtgaaaat 112  Q
    |  |||||||    
T  54330750 atttgaaaat 54330759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 3803538 - 3803458
Alignment:
Q  8 tgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    ||||||| |||||||  |||||||||||| |||| ||||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  3803538 tgcgtctttttcacatgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattttgttagctttcca 3803458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 17538809 - 17538729
Alignment:
Q  8 tgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||| || |||| |||||||    
T  17538809 tgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataaatgagttagctttcca 17538729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 112
Target Start/End: Original strand, 15931873 - 15931960
Alignment:
Q  25 tttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    |||||||||||| |||| ||||||| |||||||| ||||| | |||||||| |||| ||||||||| | |||||||||| ||| ||||    
T  15931873 tttctgttttgaattggcctttggtgtaaacatgaaagttatagataattgagttagctttccagtggccttggtttgatgtgcaaat 15931960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 25104548 - 25104634
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagt 90  Q
    |||| ||||||| || ||| |||||||||||||| |||| ||||||| |||||||| ||||| | ||||||||||||| |||||||||    
T  25104548 gttcttgcgtcttttccacgcatttctgttttgaattggcctttggtgtaaacatgaaagtt-tagataattgtgttagctttccagt 25104634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 6159106 - 6159020
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    ||||| ||||||| |||||||| |||||||||||| |||  ||||||| |||||||  ||||||| ||||||| ||||| |||||||    
T  6159106 tgttcttgcgtctttttcacacgtttctgttttgaattgacctttggtgtaaacataaaagttgtagataattttgttagctttcca 6159020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 10247237 - 10247347
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| || | |||| || |||||||| ||||||| |||||||| |||| |||| |||| |  | |||||    
T  10247237 tgttcttgcgtctttttcacacgtttctgttttgaattagcctttcgtgtaaacatgaaagttgtagataattgcgttagctttacagtggcgtcggttt 10247336  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  10247337 gacttgaaaat 10247347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 10989155 - 10989233
Alignment:
Q  10 cgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    ||||| |||||||| |||||||||||| |||| ||||||| | |||||| ||||||| ||||||| ||||| |||||||    
T  10989155 cgtctttttcacacgtttctgttttgaattggcctttggtgtgaacatgaaagttgtagataattttgttagctttcca 10989233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 33564838 - 33564752
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    ||||| ||||||| |||||||| |||| |||||||  |||  |||||| |||||||| ||||||| ||||||||||||| |||||||    
T  33564838 tgttcttgcgtctttttcacacgtttccgttttgaactgggttttggtgtaaacatgaaagttgtagataattgtgttagctttcca 33564752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 43929060 - 43928974
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    ||||| ||||| | |||||||| |||||||||||| |||| ||||||| |||||||| ||||| | ||||||| ||||| |||||||    
T  43929060 tgttcttgcgtatttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttttagataattttgttagctttcca 43928974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 50755725 - 50755835
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||| ||| |||||||| |||||||||||| |||   ||||||||||||||| ||||| | |||||| |||||| ||||| ||| |  |||||||    
T  50755725 tgttcttgcatctttttcacacgtttctgttttgaattgagttttggtataaacatgaaagttttagataatcgtgttagctttctagtggctttggttt 50755824  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  50755825 gacttgaaaat 50755835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 9533829 - 9533752
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| |||||||  |||||||||||| |||| ||||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  9533829 gtctttttcacatgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattttgttagctttcca 9533752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 10833683 - 10833768
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||| | || |||| ||||| |||||||    
T  10833683 gttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttttagaaaattttgttagctttcca 10833768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 12808649 - 12808564
Alignment:
Q  1 gtgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttc 86  Q
    |||||| ||||||| ||||||  |||||||||| || |||||||||||| |||||||| ||||| | ||||||| ||||| |||||    
T  12808649 gtgttcttgcgtctttttcacctatttctgtttcgaattggtctttggtgtaaacatgaaagttttagataattttgttagctttc 12808564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 13436946 - 13436861
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| ||||||| |||||||  |||||||||||| |||| ||||||| |||||||| ||||||| ||||||  ||||| |||||||    
T  13436946 gttcttgcgtctttttcacatgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataatgttgttagctttcca 13436861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 112
Target Start/End: Complemental strand, 17044666 - 17044565
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaa 110  Q
    |||| |||||||| |||||||||||| |||| ||||||| |||||||| || || | |||||||| ||||  |||||||| |  || |||||||||||||    
T  17044666 gtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaatttatagataattgagttagatttccagtggctttagtttgacgtgaaa 17044567  T
Q  111 at 112  Q
    ||    
T  17044566 at 17044565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 20248336 - 20248405
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgtta 80  Q
    |||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||| |||||    
T  20248336 gtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattttgtta 20248405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 41172714 - 41172822
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||| |||| || |||| ||| ||||||| |||||||| |||| ||||||||  |  || ||||    
T  41172714 tgttcttgcgtct-tttcacacgtttctgttttgaattggcctttagtgtaaaaatgaaagttgtagataattgagttagctttccagcggctttcgttt 41172812  T
Q  102 gacgtgaaaa 111  Q
    ||||||||||    
T  41172813 gacgtgaaaa 41172822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 17046821 - 17046725
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    |||||||| ||| |||||||| |||| ||||| | |||||||| ||||| | |||||||| ||||  |||||||| |  ||||||||||||||||||    
T  17046821 tttcacacgtttatgttttgaattggcctttgctgtaaacatgaaagttatagataattgagttagatttccagtggctttggtttgacgtgaaaat 17046725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 17693777 - 17693669
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| || |  |||||| |||||||| ||||||| |||||||| ||||  |||||| | |  |||||||    
T  17693777 tgttcttgcgtctttttcacacgtttctgttttgaattagcttttggtgtaaacatgaaagttgtagataattgagttagttttccaatggctttggttt 17693678  T
Q  102 gacgtgaaa 110  Q
    || ||||||    
T  17693677 gatgtgaaa 17693669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 1988574 - 1988661
Alignment:
Q  1 gtgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||||| ||||||| ||  |||| |||||||||||| ||||  |||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  1988574 gtgttcttgcgtcttttagacacgtttctgttttgaattggcgtttggtgtaaacatgaaagttgtagataattttgttagctttcca 1988661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 18699831 - 18699926
Alignment:
Q  17 ttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    ||||||| |||||||||||| || | ||||||| |||||||| ||||||| |||||||| ||||  |||||||| |  ||  ||||||||||||||    
T  18699831 ttcacacgtttctgttttgaattagcctttggtgtaaacatgaaagttgtagataattgagttagatttccagtggctttaatttgacgtgaaaat 18699926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 29544356 - 29544427
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataatt 74  Q
    |||| ||| ||| |||||||  |||||||||||| |||||||||||| |||||||| ||||||| |||||||    
T  29544356 gttcttgcatctttttcacatgtttctgttttgaattggtctttggtgtaaacatgaaagttgtagataatt 29544427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 8269328 - 8269401
Alignment:
Q  1 gtgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataatt 74  Q
    |||||| ||| ||| ||||||  ||||||||||||| |||| ||||||| |||||||| ||||||| |||||||    
T  8269328 gtgttcttgcatctttttcacctatttctgttttgaattggactttggtgtaaacatgaaagttgtagataatt 8269401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 8276439 - 8276512
Alignment:
Q  1 gtgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataatt 74  Q
    |||||| ||| ||| ||||||  ||||||||||||| |||| ||||||| |||||||| ||||||| |||||||    
T  8276439 gtgttcttgcatctttttcacctatttctgttttgaattggactttggtgtaaacatgaaagttgtagataatt 8276512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 17759015 - 17759084
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatcttt 85  Q
    |||||| |||||| ||||||| |||||||||||| |||||||| ||||| | ||||||| ||||| ||||    
T  17759015 tttcactcatttccgttttgaattggtctttggtgtaaacatgaaagttttagataattttgttagcttt 17759084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 112
Target Start/End: Complemental strand, 18890064 - 18889963
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaa 110  Q
    |||| |||| ||| |||||||||||| |||| ||||||| |||||| | ||||| | ||||||| ||||| ||||||| | |  |||||||||| |||||    
T  18890064 gtctttttctcacgtttctgttttgaattggactttggtgtaaacacgaaagttttagataattttgttagctttccaatggctttggtttgacttgaaa 18889965  T
Q  111 at 112  Q
    ||    
T  18889964 at 18889963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 19060335 - 19060404
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatcttt 85  Q
    |||||| |||||| ||||||| |||||||||||| |||||||| ||||| | ||||||| ||||| ||||    
T  19060335 tttcactcatttccgttttgaattggtctttggtgtaaacatgaaagttttagataattttgttagcttt 19060404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 27840593 - 27840524
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgtta 80  Q
    |||| |||||||| |||||||||||| |||| ||||||  |||||||| ||||||| ||||||| |||||    
T  27840593 gtctttttcacacgtttctgttttgaattggactttggagtaaacatgaaagttgtagataattttgtta 27840524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 38311355 - 38311432
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| |||||||| |||||||||||| |||| ||||| | || ||||| ||||||| ||||||| ||||| |||||||    
T  38311355 gtctttttcacacgtttctgttttgaattggcctttgatgtacacatgaaagttgtagataattttgttagctttcca 38311432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 13153770 - 13153857
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagt 90  Q
    ||||| ||| ||| |||||||| |||||||||||| || | ||||||| || ||||| ||||||| ||| ||||||||| |||||||||    
T  13153770 tgttcttgcatctttttcacacgtttctgttttgaattagcctttggtgtacacatgaaagttgtagat-attgtgttagctttccagt 13153857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 13519992 - 13519908
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttc 86  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||| | ||||  | ||||||| ||||| |||||    
T  13519992 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacacgaaagtcttagataattatgttagctttc 13519908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 14671533 - 14671445
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagt 90  Q
    ||||| ||||||| |||||||| ||||| | |||  || | ||||||| |||| ||| ||||||| ||||||||||||| |||||||||    
T  14671533 tgttcttgcgtctttttcacacgtttctctcttgtattagcctttggtgtaaagatgaaagttgtagataattgtgttagctttccagt 14671445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 19444219 - 19444112
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||  ||||||| | |||||| ||||||| ||||||| ||||| ||| ||| | |  |||||||    
T  19444219 tgttcttgcgtct-tttcacacgtttctgttttgaattgacctttggtgtgaacatgaaagttgtagataattttgttagcttcccaatggctttggttt 19444121  T
Q  102 gacgtgaaa 110  Q
    ||| |||||    
T  19444120 gacatgaaa 19444112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 35961272 - 35961340
Alignment:
Q  44 tttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    |||||| |||||||| ||||||| ||||||||||||| ||||||||| |  | |||||||| |||||||    
T  35961272 tttggtgtaaacatgaaagttgtagataattgtgttagctttccagtggcgtcggtttgacttgaaaat 35961340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 14528600 - 14528675
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttc 86  Q
    |||| |||||||  |||||||||||| |||| ||||||| |||||||| ||||| | ||||||| ||||| |||||    
T  14528600 gtctttttcacatgtttctgttttgaattggcctttggtgtaaacatgaaagttttagataattatgttagctttc 14528675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #111
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 112
Target Start/End: Complemental strand, 18893310 - 18893223
Alignment:
Q  25 tttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    |||||||||||| |||| ||||||| |||||| | ||||| | ||||||| ||||| ||||||| | |  |||||||||| |||||||    
T  18893310 tttctgttttgaattggactttggtgtaaacacgaaagttttagataattttgttagctttccaatggctttggtttgacttgaaaat 18893223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #112
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 25058440 - 25058357
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttc 86  Q
    |||| ||||||| |||||   ||||||||||||| |||| ||||||| |||||||| ||||| | ||||||| ||||| |||||    
T  25058440 gttcttgcgtctttttcatctatttctgttttgaattggcctttggtgtaaacatgaaagttttagataattttgttagctttc 25058357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #113
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 104
Target Start/End: Original strand, 9511551 - 9511611
Alignment:
Q  44 tttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgac 104  Q
    |||||| |||| ||| ||||||| ||||||||||||| ||||||||| |  ||||||||||    
T  9511551 tttggtgtaaaaatgaaagttgtagataattgtgttagctttccagtggctttggtttgac 9511611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #114
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 104
Target Start/End: Original strand, 9519526 - 9519586
Alignment:
Q  44 tttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgac 104  Q
    |||||| |||| ||| ||||||| ||||||||||||| ||||||||| |  ||||||||||    
T  9519526 tttggtgtaaaaatgaaagttgtagataattgtgttagctttccagtggctttggtttgac 9519586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #115
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 50351385 - 50351453
Alignment:
Q  44 tttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    ||||||||||||||| ||||| | ||||||| ||||| ||||||| | |  |||||||||| |||||||    
T  50351385 tttggtataaacatgaaagttttagataattttgttagctttccaatggctttggtttgacttgaaaat 50351453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 122; Significance: 1e-62; HSPs: 71)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 26 - 235
Target Start/End: Original strand, 20006661 - 20006867
Alignment:
Q  26 ttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaatcttttgtgtataa 125  Q
    |||||||||||||||||||||||| |||||||| |||||||| |||||||| ||||||||| |||||||||||||||||| |||||||||||||| ||||    
T  20006661 ttctgttttgagttggtctttggtgtaaacatgaaagttgttaataattgtattatctttctagtagtcttggtttgacgggaaaatcttttgtggataa 20006760  T
Q  126 tttaacannnnnnnnnatgaagatgtatgaatgaattattgttgttaaatatgatgtctatatgatgttattcatggttgatgaatagtgagattatgtt 225  Q
    |||||||         | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| ||||||||||| |    
T  20006761 tttaaca--tgtttttacgaagatgtatgaatgaattattgttgttaaatatgatgtttatatgatgttattcat-gttaatgaattgtgagattatgat 20006857  T
Q  226 gcgaagttga 235  Q
    ||||||||||    
T  20006858 gcgaagttga 20006867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 16 - 235
Target Start/End: Complemental strand, 45527924 - 45527705
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaatctt 115  Q
    |||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  45527924 tttcacacgtttctgtttggagttggtctttggtataaacatgaaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaatcat 45527825  T
Q  116 ttgtgtataatttaacannnnnnnnnatgaagatgtatg---aatgaattattgttgttaaatatgatgtctatatgatgttattcatggttgatgaata 212  Q
    ||||| |||||||||||         | |||||||||||   |||||| ||||||||||||||||||||||||||||||||||||||| |||  |||||     
T  45527824 ttgtggataatttaaca--tgtttttacgaagatgtatgattaatgaactattgttgttaaatatgatgtctatatgatgttattcat-gttattgaatt 45527728  T
Q  213 gtgagattatgttgcgaagttga 235  Q
    ||||||||| | |||||||||||    
T  45527727 gtgagattacgatgcgaagttga 45527705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 14183734 - 14183862
Alignment:
Q  1 gtgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtt 100  Q
    |||||| ||||||||||||| || |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  14183734 gtgttcttgcgtctatttcatacgtttctgctttgagttggtctttggtataaacatgaaagttgttgataattgtgttatctttccagtagtcttggtt 14183833  T
Q  101 tgacgtgaaaatcttttgtgtataattta 129  Q
    |||| ||||||||||||||| ||||||||    
T  14183834 tgacatgaaaatcttttgtggataattta 14183862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 51 - 235
Target Start/End: Complemental strand, 19819736 - 19819555
Alignment:
Q  51 taaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaatcttttgtgtataatttaacannnnnnnnnatgaagatg 150  Q
    |||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||         | |||||||    
T  19819736 taaacatgaaagttgctgataattgtgttaactttccagtagtcttggtttgacgtgaatatcttttgtggataatttaacatgttttt--aggaagatg 19819639  T
Q  151 tatgaatgaattattgttgttaaatatgatgtctatatgatgttattcatggttgatgaatagtgagattatgttgcgaagttga 235  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||  ||| |||||||    
T  19819638 tatgaatgaattattgttgttaaatatgatgtctatatgatgttattcat-gttaatgaattgtgagattataatgcaaagttga 19819555  T

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Target: chr2; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 14179996 - 14180124
Alignment:
Q  1 gtgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtt 100  Q
    |||||| ||||||| ||||| || |||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  14179996 gtgttcttgcgtctgtttcatacgtttctgctttgagttggtctttgatataaacatgaaagttgttgataattgtgttatctttccggtagtcttggtt 14180095  T
Q  101 tgacgtgaaaatcttttgtgtataattta 129  Q
    |||| ||||||||||||||| ||||||||    
T  14180096 tgacatgaaaatcttttgtggataattta 14180124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 11 - 235
Target Start/End: Complemental strand, 19646608 - 19646390
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaa 110  Q
    |||| |||||||| ||||||||||||||||| |||| || |||||||| ||||| |||||||||||||||||||||||| || |||||||||||||||||    
T  19646608 gtctgtttcacacgtttctgttttgagttggcctttagtgtaaacatgaaagttattgataattgtgttatctttccagcagccttggtttgacgtgaaa 19646509  T
Q  111 atcttttgtgtataatttaacannnnnnnnnatgaagatgtatgaatgaattattgttgttaaatatgatgtctatatgatgttattcatggttgatgaa 210  Q
    |||  ||||| ||||||||| |         |  |||||||||| ||||||||||  |||| ||||||||| |||||||||| ||||| | ||| |||||    
T  19646508 atc--ttgtggataatttaatatgtttttaca--aagatgtatg-atgaattattactgtttaatatgatgcctatatgatgctattcct-gttaatgaa 19646415  T
Q  211 tagtgagattatgttgcgaagttga 235  Q
    | ||||||||||| |||||||||||    
T  19646414 ttgtgagattatgatgcgaagttga 19646390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 5031473 - 5031583
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| ||||||||||||||||||||| |||| ||||| | |||||||| ||||||| |||||||| |||| ||||||||| |  |||||||    
T  5031473 tgttcttgcgtctttttcacacatttctgttttgaattggcctttgatgtaaacatgaaagttgtagataattgagttagctttccagtggatttggttt 5031572  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  5031573 gacgtgaaaat 5031583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 25183895 - 25183786
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| |||||||| ||| |||||||| |||| |||||||||||||||| ||||||| ||||||||||||| ||||||||| |  ||||||||    
T  25183895 gttcttgcgtctttttcacacgtttatgttttgaattggcctttggtataaacatgaaagttgtagataattgtgttagctttccagtggctttggtttg 25183796  T
Q  103 acgtgaaaat 112  Q
    || |||||||    
T  25183795 acttgaaaat 25183786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 19196417 - 19196545
Alignment:
Q  1 gtgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtt 100  Q
    |||||| ||||||| |||| ||| ||||||||||||||||| |||| || |||| ||  || || |||||||||||||||||||||||||||  ||||||    
T  19196417 gtgttcttgcgtctgtttcgcacgtttctgttttgagttggcctttagtgtaaatataaaaattattgataattgtgttatctttccagtagctttggtt 19196516  T
Q  101 tgacgtgaaaatcttttgtgtataattta 129  Q
    |||| |||||| |||||||| | ||||||    
T  19196517 tgacatgaaaaccttttgtggaaaattta 19196545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 18358313 - 18358427
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||||||||| |||| |||| |  ||||||||    
T  18358313 gttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgtgttagcttttcagtggctttggtttg 18358412  T
Q  103 acgtgaaaatctttt 117  Q
    || ||||||| ||||    
T  18358413 acttgaaaatgtttt 18358427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 19201543 - 19201653
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| ||||  |||||| |||||||| ||||||| |||||||| |||| ||||||||| |  |||||||    
T  19201543 tgttcttgcgtctttttcacacgtttctgttttgaattggcttttggtttaaacatgaaagttgtagataattgagttagctttccagtggctttggttt 19201642  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  19201643 gacgtgaaaat 19201653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 23968966 - 23969076
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||  |||||||||||| |||| ||||||| |||||||| ||||||| ||||||||||||| ||||||||| |  |||||||    
T  23968966 tgttcttgcgtctttttcacatgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagtggctttggttt 23969065  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  23969066 gacttgaaaat 23969076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 24781183 - 24781293
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||  ||||||| |||||||| ||||||| |||||||| |||| ||||||||| |  |||||||    
T  24781183 tgttcttgcgtctttttcacacgtttctgttttgaattgacctttggtgtaaacatgaaagttgtagataattgagttagctttccagtggctttggttt 24781282  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  24781283 gacgtgaaaat 24781293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 9785290 - 9785189
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| ||||||||||||||| | ||||||| |||||||| ||||||||||||||||||||| ||||| ||| |  |||||||    
T  9785290 tgttcttgcgtct-tttcacacgtttctgttttgagttagcctttggtgtaaacatgaaagttgttgataattgtgttagctttcaagtggcgttggttt 9785192  T
Q  102 gac 104  Q
    |||    
T  9785191 gac 9785189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 9975638 - 9975528
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||| |||| || |||||||| ||||||| |||||||| ||||  |||||||| |  |||||||    
T  9975638 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttagtgtaaacatgaaagttgtagataattgagttagttttccagtggctttggttt 9975539  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  9975538 gacgtgaaaat 9975528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 17307195 - 17307086
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||||||||||| |||||||| |||||||||||| |||| ||||||| | |||||| ||||||| |||||||| |||| ||||| ||| |  |||||||    
T  17307195 tgttcctgcgtctttttcacacgtttctgttttgaattggcctttggtgt-aacatgaaagttgtagataattgagttagctttctagtggctttggttt 17307097  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  17307096 gacgtgaaaat 17307086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 18809591 - 18809481
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| || | ||||||| |||||||| ||||||| ||||||||||||| ||||||||| |  | |||||    
T  18809591 tgttcttgcgtctttttcacacgtttctgttttgaattagcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagtggcgtcggttt 18809492  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  18809491 gacttgaaaat 18809481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 39682962 - 39682852
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| ||||||||||||||||||||| || | ||||||| |||||||| ||||||| | ||||||||||| ||||||||| |  | |||||    
T  39682962 tgttcttgcgtctttttcacacatttctgttttgaattagcctttggtgtaaacatgaaagttgtagctaattgtgttagctttccagtggcatcggttt 39682863  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  39682862 gacttgaaaat 39682852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 21081315 - 21081416
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||||||||| ||||| ||| |  ||||||||    
T  21081315 gttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgtgttagctttctagtggctttggtttg 21081414  T
Q  103 ac 104  Q
    ||    
T  21081415 ac 21081416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 40912033 - 40911922
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgag-ttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtt 100  Q
    ||||| ||||||| ||||| || ||||||||||||  |||| ||||||| |||||||| ||||||| |||||||| |||| |||||||||||  ||| ||    
T  40912033 tgttcttgcgtctttttcatacgtttctgttttgaaattggcctttggtgtaaacatgaaagttgtagataattgagttagctttccagtagctttgatt 40911934  T
Q  101 tgacgtgaaaat 112  Q
    ||||||||||||    
T  40911933 tgacgtgaaaat 40911922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 2524090 - 2524200
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| ||| |||| |||||||||||| |||| ||||||| |||||||| ||||||| |||||||| ||||  |||||||| |  |||||||    
T  2524090 tgttcttgcgtctttttaacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgagttagatttccagtggctttggttt 2524189  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  2524190 gacatgaaaat 2524200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 10039477 - 10039587
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||| ||| |||| ||||||| |||| ||| ||||| | ||||||||||||| ||||| ||| || |||||||    
T  10039477 tgttcttgcgtctttttcacacgtttctgttctgaattggcctttggtgtaaatatgaaagttttagataattgtgttagctttctagtggtattggttt 10039576  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  10039577 gacttgaaaat 10039587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 23711527 - 23711637
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| || | ||||||| |||||||| ||||||| ||||||||||||| |||| |||| |  | |||||    
T  23711527 tgttcttgcgtctttttcacacgtttctgttttgaattagcctttggtgtaaacatgaaagttgtagataattgtgttagctttacagtggcgtcggttt 23711626  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  23711627 gacttgaaaat 23711637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 26506027 - 26505917
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| || | ||||||| |||||||| ||||||| ||||||||||||| |||| |||| |  | |||||    
T  26506027 tgttcttgcgtctttttcacacgtttctgttttgaattagcctttggtgtaaacatgaaagttgtagataattgtgttagctttacagtggcgtcggttt 26505928  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  26505927 gacttgaaaat 26505917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 26508505 - 26508395
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| || | ||||||| |||||||| ||||||| ||||||||||||| |||| |||| |  | |||||    
T  26508505 tgttcttgcgtctttttcacacgtttctgttttgaattagcctttggtgtaaacatgaaagttgtagataattgtgttagctttacagtggcgtcggttt 26508406  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  26508405 gacttgaaaat 26508395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 27920278 - 27920388
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| || | ||||||| |||||||| ||||||| ||||||||||||| |||| |||| |  | |||||    
T  27920278 tgttcttgcgtctttttcacacgtttctgttttgaattagcctttggtgtaaacatgaaagttgtagataattgtgttagctttacagtggcgtcggttt 27920377  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  27920378 gacttgaaaat 27920388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 28577747 - 28577637
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||| | || | ||||||| |||||||| ||||||| ||||||||||||| ||||||||| |  | |||||    
T  28577747 tgttcttgcgtctttttcacacgtttctgtttttaattagcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagtggcgtcggttt 28577648  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  28577647 gacttgaaaat 28577637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 28652845 - 28652955
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| ||||| || |||||||||||| |||| ||||||| |||||||| ||||||| |||||||| ||||  ||| |||| |  |||||||    
T  28652845 tgttcttgcgtctttttcatacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgagttagattttcagtggctttggttt 28652944  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  28652945 gacgtgaaaat 28652955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 10684277 - 10684362
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| ||||||| |||||||  |||||||||||| |||||||||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  10684277 gttcttgcgtctttttcacatgtttctgttttgaattggtctttggtgtaaacatgaaagttgtagataattttgttagctttcca 10684362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 31345814 - 31345718
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    |||||||| |||||||||||| |||| ||||||| |||||||  ||||||| ||||||||||||| |||| |||| |  |||||||||| |||||||    
T  31345814 tttcacacgtttctgttttgaattggcctttggtgtaaacataaaagttgtagataattgtgttagcttttcagtggctttggtttgacatgaaaat 31345718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 34402036 - 34402124
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagt 90  Q
    ||||| ||||||| |||||||| |||||||||||| || | |||| || |||||||| ||||||| ||||||||||||| |||||||||    
T  34402036 tgttcttgcgtctttttcacacgtttctgttttgaattagcctttagtgtaaacatgaaagttgtagataattgtgttagctttccagt 34402124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 20261860 - 20261782
Alignment:
Q  10 cgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    ||||| |||||||  |||||||||||| |||||||||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  20261860 cgtctttttcacatgtttctgttttgaattggtctttggtgtaaacatgaaagttgtagataattttgttagctttcca 20261782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 36839880 - 36839770
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| ||||  |||||| |||||||| ||||||| |||||||| ||||  |||||||| |  |||||||    
T  36839880 tgttcttgcgtctttttcacacgtttctgttttgaattggcatttggtgtaaacatgaaagttgtagataattgagttagttttccagtggatttggttt 36839781  T
Q  102 gacgtgaaaat 112  Q
     || |||||||    
T  36839780 tacatgaaaat 36839770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 38968128 - 38968018
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| |||| || ||||||||||||||||||| | || | ||||| | |||||||| ||||||| ||||||||||||| ||||||||| |  | |||||    
T  38968128 tgttcttgcgcctttttcacacatttctgttttcaattagcctttgctgtaaacatgaaagttgtagataattgtgttagctttccagtggcgtcggttt 38968029  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  38968028 gacttgaaaat 38968018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 6260730 - 6260807
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  6260730 gtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattttgttaactttcca 6260807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 19662007 - 19662084
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  19662007 gtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattttgttagctttcca 19662084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 22255920 - 22255811
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||| ||| ||||||  ||||||||||||| |||| ||||||| |||||||| ||||| | ||||||||||||| ||||||| | |  ||||||||    
T  22255920 gttcttgcatctttttcacctatttctgttttgaattggcctttggtgtaaacatgaaagttttagataattgtgttagctttccaatggatttggtttg 22255821  T
Q  103 acgtgaaaat 112  Q
    || |||||||    
T  22255820 acttgaaaat 22255811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 23778639 - 23778724
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| ||||||| ||||||  ||||||||||||| |||| ||||||| |||||||| ||||| | ||||||||||||| |||||||    
T  23778639 gttcttgcgtctttttcacctatttctgttttgaattggactttggtgtaaacatgaaagttttagataattgtgttagctttcca 23778724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 23131510 - 23131422
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagt 90  Q
    ||||| ||||||| |||||||| |||||||||||| || | |||| || || ||||| ||||||| ||||||||||||| |||||||||    
T  23131510 tgttcttgcgtctttttcacacgtttctgttttgaattagcctttagtgtacacatgaaagttgtagataattgtgttagctttccagt 23131422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 23133977 - 23133889
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagt 90  Q
    ||||| ||||||| |||||||| |||||||||||| || | |||| || || ||||| ||||||| ||||||||||||| |||||||||    
T  23133977 tgttcttgcgtctttttcacacgtttctgttttgaattagcctttagtgtacacatgaaagttgtagataattgtgttagctttccagt 23133889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 19887250 - 19887325
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttc 86  Q
    |||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||| ||||| |||||    
T  19887250 gtctttttcacacgtttctgttttgaattggactttggtgtaaacatgaaagttgtagataattttgttagctttc 19887325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 29 - 112
Target Start/End: Original strand, 21316032 - 21316115
Alignment:
Q  29 tgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    |||||||| ||||  |||||| |||||||| ||||||| ||||||||||||| |||||||||   ||| |||||||||||||||    
T  21316032 tgttttgaattggcatttggtgtaaacatgaaagttgtagataattgtgttagctttccagtgtccttcgtttgacgtgaaaat 21316115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 29 - 112
Target Start/End: Original strand, 21335823 - 21335906
Alignment:
Q  29 tgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    |||||||| |||  ||||||| |||||| | ||||||| ||||||||||||| ||||||||| |  ||||||||||||||||||    
T  21335823 tgttttgaattgacctttggtgtaaacaagaaagttgtagataattgtgttagctttccagtggctttggtttgacgtgaaaat 21335906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 24515895 - 24515785
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtctt-ggtt 100  Q
    ||||| ||||||| |||||||  ||| |||||||| ||||  |||||| |||||||| ||||||| |||| ||| |||| ||||||||| ||||| ||||    
T  24515895 tgttcttgcgtctttttcacatgtttttgttttgaattggcatttggtgtaaacatgaaagttgtagatagttgagttagctttccagt-gtctttggtt 24515797  T
Q  101 tgacgtgaaaat 112  Q
    ||||||||||||    
T  24515796 tgacgtgaaaat 24515785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 572046 - 571936
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| ||||| |  |||||||||||| || | ||||| | |||||||| ||||||| ||||||||||||| ||||||||| |  | |||||    
T  572046 tgttcttgcgtctttttcatatgtttctgttttgaattagcctttgctgtaaacatgaaagttgtagataattgtgttagctttccagtggcgtcggttt 571947  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  571946 gacttgaaaat 571936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 112
Target Start/End: Complemental strand, 21368800 - 21368706
Alignment:
Q  18 tcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    |||||| |||||||||||| |||| ||||||| |||||||| ||||| | ||||||||||||| |||||| || |  |||||||| | |||||||    
T  21368800 tcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttttagataattgtgttagctttccggtggatttggtttggcttgaaaat 21368706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 112
Target Start/End: Complemental strand, 22694977 - 22694875
Alignment:
Q  10 cgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaa 109  Q
    ||||| |||||||| |||||||||||| || | |||| || ||| |||| ||||||  ||||||||||||| ||||||||| |  |||||||||| ||||    
T  22694977 cgtctttttcacacgtttctgttttgaattagcctttagtgtaagcatgaaagttggagataattgtgttagctttccagtggcgttggtttgacttgaa 22694878  T
Q  110 aat 112  Q
    |||    
T  22694877 aat 22694875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 23136228 - 23136142
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    ||||| ||||||| |||||||| |||||||||||| || | ||||||| |||| ||| ||||||| ||||||| ||||| |||||||    
T  23136228 tgttcttgcgtctttttcacacgtttctgttttgaattagcctttggtgtaaagatgaaagttgtagataattttgttagctttcca 23136142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 27484813 - 27484923
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||   |||| | |||||||| ||| ||| |||||||| |||| ||||||||| |  |||||||    
T  27484813 tgttcttgcgtctttttcacacgtttctgttttgaattgacatttgatgtaaacatgaaagatgtagataattgagttagctttccagtggctttggttt 27484912  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  27484913 gacatgaaaat 27484923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 120
Target Start/End: Original strand, 36734828 - 36734946
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| ||||| || |||||||||||| |||| ||||||| |||||||| ||||| | ||||||  |||||  |||||| | |  |||||||    
T  36734828 tgttcttgcgtctttttcatacgtttctgttttgaattggcctttggtgtaaacatgaaagttttagataatgttgttagatttccaatggctttggttt 36734927  T
Q  102 gacgtgaaaatcttttgtg 120  Q
    ||| ||||||| |||||||    
T  36734928 gacttgaaaatgttttgtg 36734946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 110
Target Start/End: Original strand, 41301330 - 41301424
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaa 110  Q
    |||||||  |||||||||||| |||| ||||||| |||||||| ||||||| ||||||| ||||| ||||||| | |  |||||||||| |||||    
T  41301330 tttcacatgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattttgttagctttccaatggctttggtttgacttgaaa 41301424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 6483219 - 6483142
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| |||||||| |||||||||||| |||| ||||||| |||||||  ||||||| ||||||| ||||| |||||||    
T  6483219 gtctttttcacacgtttctgttttgaattggcctttggtgtaaacataaaagttgtagataattttgttagctttcca 6483142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 6486686 - 6486609
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| |||||||| |||||||||||| |||| ||||||| |||||||  ||||||| ||||||| ||||| |||||||    
T  6486686 gtctttttcacacgtttctgttttgaattggcctttggtgtaaacataaaagttgtagataattttgttagctttcca 6486609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 22501495 - 22501399
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    |||||| | |||||||||||| || || || ||| |||||||| ||||||| |||||||| |||| ||||||||| |  |||||||||| |||||||    
T  22501495 tttcacccttttctgttttgaatttgttttcggtgtaaacatgaaagttgtagataattgagttagctttccagtggctttggtttgacttgaaaat 22501399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 22509429 - 22509333
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    |||||| | |||||||||||| || || || ||| |||||||| ||||||| |||||||| |||| ||||||||| |  |||||||||| |||||||    
T  22509429 tttcacccttttctgttttgaatttgttttcggtgtaaacatgaaagttgtagataattgagttagctttccagtggctttggtttgacttgaaaat 22509333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 24383206 - 24383134
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||||| |||||||||||||| |||| ||||||| |||||||| ||||| | ||||||| ||||| |||||||    
T  24383206 tttcacccatttctgttttgaattggcctttggtgtaaacatgaaagttttagataattttgttagctttcca 24383134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 31520812 - 31520716
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    |||||| | |||||||||||| || |  |||||| |||||||| ||||| | ||||||||||||| ||||||||| |  |||||||||| |||||||    
T  31520812 tttcacccttttctgttttgaatttgcttttggtgtaaacatgaaagttttagataattgtgttagctttccagtggctttggtttgacttgaaaat 31520716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 23338744 - 23338815
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataatt 74  Q
    |||| ||||||| |||||||| |||||||||||| ||||  |||||| |||||||| ||||||| |||||||    
T  23338744 gttcttgcgtctttttcacacgtttctgttttgaattggcatttggtgtaaacatgaaagttgtagataatt 23338815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 20590665 - 20590775
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||  |||||  |||||  |||  |||||| |||||||| ||| ||| ||||||| ||||||||||||| | |  |||||||    
T  20590665 tgttcttgcgtctgtttcacatgtttctactttgaactgggttttggtgtaaacatgaaagctgtagataattttgttatctttccaatggctttggttt 20590764  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  20590765 gacgtgaaaat 20590775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 112
Target Start/End: Complemental strand, 22690381 - 22690279
Alignment:
Q  10 cgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaa 109  Q
    ||||| |||||||| |||||||||||| || | |||| || ||| |||| ||||||  ||||||||||||| ||||||||| |  | |||||||| ||||    
T  22690381 cgtctttttcacacgtttctgttttgaattagcctttagtgtaagcatgaaagttggagataattgtgttagctttccagtggcgtcggtttgacttgaa 22690282  T
Q  110 aat 112  Q
    |||    
T  22690281 aat 22690279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 23068793 - 23068903
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| || |||| |||||||| |||||||||||| |||| |||| || |||||| | ||||||| |||||||| |||   |||| ||| |  |||||||    
T  23068793 tgttcttgtgtctttttcacacgtttctgttttgaattggcctttagtgtaaacacgaaagttgtagataattgagtttgttttctagtggctttggttt 23068892  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  23068893 gacgtgaaaat 23068903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 66 - 128
Target Start/End: Complemental strand, 23799651 - 23799589
Alignment:
Q  66 ttgataattgtgttatctttccagtagtcttggtttgacgtgaaaatcttttgtgtataattt 128  Q
    ||||||||||||||||||| ||| ||| ||||||||||  ||||||| ||||||| |||||||    
T  23799651 ttgataattgtgttatcttcccaatagccttggtttgaaatgaaaatattttgtggataattt 23799589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 32039012 - 32039122
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||  ||||| || |||||||||| | || | ||||||| |||||||| ||||||| ||||||||||||| |||| |||| |  | |||||    
T  32039012 tgttcttgcgtcattttcatacgtttctgttttcaattagcctttggtgtaaacatgaaagttgtagataattgtgttagctttacagtggcgtcggttt 32039111  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  32039112 gacttgaaaat 32039122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 9242460 - 9242391
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgtta 80  Q
    |||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||| | ||||||| |||||    
T  9242460 gtctttttcacacgtttctgttttgaattggactttggtgtaaacatggaagttttagataattttgtta 9242391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 23759988 - 23760065
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| |||||||| |||||||||||| |||| ||| ||| |||||||| ||||| | ||||||| ||||| |||||||    
T  23759988 gtctttttcacacgtttctgttttgaattggacttgggtgtaaacatggaagttttagataattttgttagctttcca 23760065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 112
Target Start/End: Original strand, 1384035 - 1384139
Alignment:
Q  8 tgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtg 107  Q
    ||||||| ||||| || |||||||||||| |||  | || || |||||||| ||||||| ||||||||| ||| ||||||||| |  |||| ||||| ||    
T  1384035 tgcgtctttttcaaacgtttctgttttgaattgaccatttgtgtaaacatgaaagttgtagataattgtattagctttccagtggctttggattgacttg 1384134  T
Q  108 aaaat 112  Q
    |||||    
T  1384135 aaaat 1384139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 24686565 - 24686636
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataatt 74  Q
    |||| ||||||| ||||||  |||||||||| || |||||||||||| |||||||| ||||| | |||||||    
T  24686565 gttcttgcgtctttttcacctatttctgtttcgaattggtctttggtgtaaacatgaaagttttagataatt 24686636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 86
Target Start/End: Complemental strand, 27261466 - 27261391
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttc 86  Q
    |||| ||||||| ||||||||||||| |||| ||||||| |||||||| || || | ||||||| ||||| |||||    
T  27261466 gtctttttcacatatttctgttttgaattggcctttggtgtaaacatgaaaattttagataattatgttagctttc 27261391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 29114019 - 29113973
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggt 49  Q
    |||| ||||||| ||||||||||||||||||||| |||| |||||||    
T  29114019 gttcttgcgtctttttcacacatttctgttttgaattggcctttggt 29113973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 149890 - 149959
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgata 71  Q
    ||||| ||||||| |||||||| |||||||||||| ||||  ||| || |||||||| ||||||| ||||    
T  149890 tgttcttgcgtctttttcacacgtttctgttttgaattggcatttagtgtaaacatgaaagttgtagata 149959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 112
Target Start/End: Complemental strand, 22332416 - 22332315
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaa 110  Q
    |||| ||||||||||||||||||||| ||||  |||||  | |||||  | ||| | ||||||||||||| ||||||||| |  ||| |||||| |||||    
T  22332416 gtctttttcacacatttctgttttgaattggcttttggagtgaacataaatgttttagataattgtgttagctttccagtggctttgatttgacttgaaa 22332317  T
Q  111 at 112  Q
    ||    
T  22332316 at 22332315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 121; Significance: 4e-62; HSPs: 112)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 3 - 235
Target Start/End: Complemental strand, 33059876 - 33059647
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    ||||||| |||| |||||||| |||||||| |||||||||||||||| |||||||| |||||||||||| ||||||||||||| ||||||||||||||||    
T  33059876 gttcctgtgtctgtttcacacgtttctgttctgagttggtctttggtgtaaacatgaaagttgttgatatttgtgttatcttttcagtagtcttggtttg 33059777  T
Q  103 acgtgaaaatcttttgtgtataatttaacannnnnnnnnatgaagatgtatgaatgaattattgttgttaaatatgatgtctatatgatgttattcatgg 202  Q
    |||||||||||||||||| |||||||||||         | ||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||      
T  33059776 acgtgaaaatcttttgtggataatttaaca--tgtttttacgaagatgtatgaatgtattattattgttaaatatgatatctatatgatgttattcat-a 33059680  T
Q  203 ttgatgaatagtgagattatgttgcgaagttga 235  Q
    || |||||| ||||||||||| ||| |||||||    
T  33059679 ttaatgaattgtgagattatgatgcaaagttga 33059647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 18985074 - 18985253
Alignment:
Q  1 gtgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtt 100  Q
    |||||| ||||||| ||||||||||||||||||||| |||  ||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  18985074 gtgttcttgcgtctttttcacacatttctgttttgatttgacctttggtgtaaacatgaaagttgttgataattgtgttatctttccagtggtcttggtt 18985173  T
Q  101 tgacgtgaaaatcttttgtgtataatttaacannnnnnnnnatgaagatgtatgaatgaattattgttgttaaatatgatgt 182  Q
    |||| ||||||||||||||| |||||||||||         | |||||||||||||||||||||||||||||||||||||||    
T  18985174 tgacatgaaaatcttttgtggataatttaaca--tgtttttacgaagatgtatgaatgaattattgttgttaaatatgatgt 18985253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 18999702 - 18999881
Alignment:
Q  1 gtgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtt 100  Q
    |||||| ||||||| ||||||||||||||||||||| |||  ||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  18999702 gtgttcttgcgtctttttcacacatttctgttttgatttgacctttggtgtaaacatgaaagttgttgataattgtgttatctttccagtggtcttggtt 18999801  T
Q  101 tgacgtgaaaatcttttgtgtataatttaacannnnnnnnnatgaagatgtatgaatgaattattgttgttaaatatgatgt 182  Q
    |||| ||||||||||||||| |||||||||||         | |||||||||||||||||||||||||||||||||||||||    
T  18999802 tgacatgaaaatcttttgtggataatttaaca--tgtttttacgaagatgtatgaatgaattattgttgttaaatatgatgt 18999881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 42566448 - 42566679
Alignment:
Q  1 gtgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtt 100  Q
    |||||| ||||||| |||||||| ||| ||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||| |||||||    
T  42566448 gtgttcttgcgtctgtttcacacgtttttgttttgagttggtctttggtgtaaacatgaaagttgttgataactgtgttatctttccagtagccttggtt 42566547  T
Q  101 tgacgt-gaaaatcttttgtgtataatttaacannnnnnnnnatgaagatgtatgaatgaattattgttgttaaatatgatgtctatatgatgttattca 199  Q
    ||||||  ||||| ||||||| ||||||||| |         |  |||||||||| ||||||||||| | ||||||||||||| ||||||||||||||||    
T  42566548 tgacgtaaaaaatattttgtggataatttaatatgtttttaca--aagatgtatg-atgaattattgctattaaatatgatgtttatatgatgttattca 42566644  T
Q  200 tggttgatgaatagtgagattatgttgcgaagttga 235  Q
    | ||| |||||| ||||||||||| || ||||||||    
T  42566645 t-gttaatgaattgtgagattatgatgtgaagttga 42566679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 3 - 128
Target Start/End: Original strand, 33556713 - 33556838
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| |||||||||||||||| ||||||||||||||||| |||| || |||| ||| ||||| ||||||||||||||||||||||||||| |||||||||    
T  33556713 gttcttgcgtctatttcacacgtttctgttttgagttggcctttagtgtaaatatgaaagttattgataattgtgttatctttccagtagccttggtttg 33556812  T
Q  103 acgtgaaaatcttttgtgtataattt 128  Q
    || ||||||||||||||| |||||||    
T  33556813 acatgaaaatcttttgtggataattt 33556838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 13316712 - 13316829
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaa 110  Q
    |||| |||||||| ||||||||||||||||||||| ||| ||||| || ||||||||||||||||||||||||||| ||||| |||||||||| ||||||    
T  13316712 gtctgtttcacacgtttctgttttgagttggtcttcggtgtaaacgtgaaagttgttgataattgtgttatctttctagtagccttggtttgatgtgaaa 13316811  T
Q  111 atcttttgtgtataattt 128  Q
    | |||||||| |||||||    
T  13316812 accttttgtggataattt 13316829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 36301301 - 36301428
Alignment:
Q  1 gtgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtt 100  Q
    |||||| ||||| | |||| ||| ||||||||||||||||  |||| || |||| ||| ||||| ||||||||||||||||||||||||||| |||||||    
T  36301301 gtgttcttgcgtgtgtttcgcacgtttctgttttgagttgacctttagtgtaaatatgaaagttattgataattgtgttatctttccagtagccttggtt 36301400  T
Q  101 tgacgtgaaaatcttttgtgtataattt 128  Q
    |||| ||||||||||||||| |||||||    
T  36301401 tgacatgaaaatcttttgtggataattt 36301428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 18570192 - 18570066
Alignment:
Q  1 gtgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtt 100  Q
    |||||| ||||||| ||||  || |||||||||| | |||||||||| |||||||||| ||||||||||||  ||||||||||||||||||| ||||||     
T  18570192 gtgttcttgcgtctgtttcgtacgtttctgttttaaattggtctttgatataaacatgaaagttgttgatatctgtgttatctttccagtagccttggta 18570093  T
Q  101 tgacgtgaaaatcttttgtgtataatt 127  Q
    |||||||||||||||||| | ||||||    
T  18570092 tgacgtgaaaatcttttgaggataatt 18570066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 8931432 - 8931560
Alignment:
Q  1 gtgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtt 100  Q
    |||||||||||||| |||| ||| |||||||||||||||||  ||| || |||| ||| || || |||||||||||||||||| |||||||| |||||||    
T  8931432 gtgttcctgcgtctgtttcgcacgtttctgttttgagttggcatttagtgtaaatatgaaaattattgataattgtgttatctctccagtagccttggtt 8931531  T
Q  101 tgacgtgaaaatcttttgtgtataattta 129  Q
    |||||||||||  ||||||| ||||||||    
T  8931532 tgacgtgaaaactttttgtggataattta 8931560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 38294987 - 38294870
Alignment:
Q  8 tgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtg 107  Q
    ||||||| |||||||  |||||||||||||||||  ||| || |||| ||| ||||| |||||||||||||||| |||||||||| ||||||||||| ||    
T  38294987 tgcgtctgtttcacatgtttctgttttgagttggcatttagtgtaaatatgaaagttattgataattgtgttatatttccagtagccttggtttgacatg 38294888  T
Q  108 aaaatcttttgtgtataa 125  Q
    ||||||||||||| ||||    
T  38294887 aaaatcttttgtggataa 38294870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 12371984 - 12371874
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| |||||||| |||| ||||||||| |  |||||||    
T  12371984 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgagttagctttccagtggctttggttt 12371885  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  12371884 gacgtgaaaat 12371874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 12465603 - 12465713
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| |||||||| |||| ||||||||| |  |||||||    
T  12465603 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgagttagctttccagtggctttggttt 12465702  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  12465703 gacgtgaaaat 12465713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 36685592 - 36685702
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| |||||||| |||| ||||||||| |  |||||||    
T  36685592 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgagttagctttccagtggctttggttt 36685691  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  36685692 gacgtgaaaat 36685702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 1856744 - 1856853
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||||||||| ||||||||| |  ||||||||    
T  1856744 gttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagtggctttggtttg 1856843  T
Q  103 acgtgaaaat 112  Q
    || |||||||    
T  1856844 acatgaaaat 1856853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 29052499 - 29052608
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| | ||||||||||| ||||||||| || ||||||||    
T  29052499 gttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtaggtaattgtgttagctttccagtggttttggtttg 29052598  T
Q  103 acgtgaaaat 112  Q
    || |||||||    
T  29052599 acttgaaaat 29052608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 8851502 - 8851612
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| |||||||| ||||  |||||||| |  |||||||    
T  8851502 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgagttaggtttccagtggctttggttt 8851601  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  8851602 gacgtgaaaat 8851612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 16462745 - 16462635
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| || |||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||||||||| ||||||||| |  |||||||    
T  16462745 tgttcttgtgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagtggctttggttt 16462646  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  16462645 gacttgaaaat 16462635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 18875189 - 18875299
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| ||| |||||||| |||||||| |||| ||||||| |||||||| ||||||| |||||||| |||| ||||||||| |  |||||||    
T  18875189 tgttcttgcgtctttttaacacatttatgttttgaattggcctttggtgtaaacatgaaagttgtagataattgagttagctttccagtggatttggttt 18875288  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  18875289 gacgtgaaaat 18875299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 16550348 - 16550457
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| |||||||| ||| |||||||| |||| ||||||| |||||||| ||||||| ||||||||||||| ||||||||| |  ||||||||    
T  16550348 gttcttgcgtctttttcacacgtttttgttttgaattggcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagtggctttggtttg 16550447  T
Q  103 acgtgaaaat 112  Q
    || |||||||    
T  16550448 acttgaaaat 16550457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 16615314 - 16615205
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| |||||||| ||| |||||||| |||| ||||||| |||||||| ||||||| ||||||||||||| ||||||||| |  ||||||||    
T  16615314 gttcttgcgtctttttcacacgtttttgttttgaattggcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagtggctttggtttg 16615215  T
Q  103 acgtgaaaat 112  Q
    || |||||||    
T  16615214 acttgaaaat 16615205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 13917930 - 13918026
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||||||||| ||||||||| |  |||||||||| |||||||    
T  13917930 tttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagtggctttggtttgacatgaaaat 13918026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 129
Target Start/End: Complemental strand, 11309826 - 11309699
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| |||||||||||||||  ||| |||| ||| ||  ||||||||||||||||| ||  |||||||||||||| ||||||||||||||  |||||||    
T  11309826 tgttcttgcgtctatttcacatgtttttgttctgaattactctttggtataaacatgaaatatgttgataattgtgatatctttccagtagatttggttt 11309727  T
Q  102 gacgtgaaaatcttttgtgtataattta 129  Q
    | | ||||||||| |||||  |||||||    
T  11309726 ggcatgaaaatctgttgtggttaattta 11309699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 13147815 - 13147926
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| ||||| |||||| |||| ||||||| |||||||| ||||||| |||||||| |||| ||||||| | |  |||||||    
T  13147815 tgttcttgcgtctttttcacacgtttctattttgaattggcctttggtgtaaacatgaaagttgtagataattgagttagctttccattggatttggttt 13147914  T
Q  102 gacgtgaaaatc 113  Q
    ||||||||||||    
T  13147915 gacgtgaaaatc 13147926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 13869994 - 13869886
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| || | ||||||| |||||||| ||||||| ||||||||||||| ||||||||| |||  |||||    
T  13869994 tgttcttgcgtctttttcacacgtttctgttttgaattagcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagtggtc--ggttt 13869897  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  13869896 gacttgaaaat 13869886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 18431361 - 18431250
Alignment:
Q  2 tgttcctgcgtctatttcacacattt-ctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtt 100  Q
    ||||| ||||||| |||||||||||| ||||||||| || | ||||||| |||||||| ||||||| ||||||||||||||||||||||| |  | ||||    
T  18431361 tgttcttgcgtctttttcacacattttctgttttgaattagcctttggtgtaaacatgaaagttgtagataattgtgttatctttccagtggcgtcggtt 18431262  T
Q  101 tgacgtgaaaat 112  Q
    |||| |||||||    
T  18431261 tgacttgaaaat 18431250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 708898 - 709008
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||| ||| |||| ||||||| |||||||| ||||||| ||||||||||||| ||||||| | |  |||||||    
T  708898 tgttcttgcgtctttttcacacgtttctgttatgatttggcctttggtgtaaacatgaaagttgtagataattgtgttagctttccaatggctttggttt 708997  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  708998 gacttgaaaat 709008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 3287699 - 3287589
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| ||||||||  |||||| ||||||||||||| ||||| ||| |  |||||||    
T  3287699 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgacagttgtagataattgtgttagctttctagtggctttggttt 3287600  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  3287599 gacttgaaaat 3287589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 13647951 - 13647841
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| || |||| |||||||| |||||||||| | |||| ||||||| |||||||| ||||||| |||||||| |||| ||||||||| |  |||||||    
T  13647951 tgttcttgtgtctttttcacacgtttctgttttcaattggcctttggtctaaacatgaaagttgtagataattgagttagctttccagtggctttggttt 13647852  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  13647851 gacgtgaaaat 13647841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 15376227 - 15376337
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| || | ||||||| |||||||| ||||||| ||||||||||||| ||||||||| |  | |||||    
T  15376227 tgttcttgcgtctttttcacacgtttctgttttgaattagcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagtggcgtcggttt 15376326  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  15376327 gacttgaaaat 15376337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 15720458 - 15720348
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||| | ||||||| ||||| ||||||| | || |||||||    
T  15720458 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttttagataattttgttagctttccaatggttttggttt 15720359  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  15720358 gacttgaaaat 15720348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 16233169 - 16233059
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| || | ||||||| |||||||| ||||||| ||||||||||||| ||||||||| |  | |||||    
T  16233169 tgttcttgcgtctttttcacacgtttctgttttgaattagcctttggtgtaaacatggaagttgtagataattgtgttagctttccagtggcgtcggttt 16233070  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  16233069 gacttgaaaat 16233059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 20384637 - 20384747
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| || | ||||||| |||||||| ||||||| ||||||||||||| ||||||||| |  | |||||    
T  20384637 tgttcttgcgtctttttcacacgtttctgttttgaattagcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagtggcgtcggttt 20384736  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  20384737 gacttgaaaat 20384747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 20586061 - 20585951
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||| ||| |||||||| ||||||| |||||||| |||| |||||| || |  |||||||    
T  20586061 tgttcttgcgtctttttcacacttttctgttttgaattggccttaggtgtaaacatgaaagttgtagataattgagttagctttcccgtggctttggttt 20585962  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  20585961 gacgtgaaaat 20585951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 30820599 - 30820709
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||  ||||||| |||||||| ||||| | ||||||||||||| ||||| ||| || |||||||    
T  30820599 tgttcttgcgtctttttcacacgtttctgttttgaattgacctttggtgtaaacatgaaagttttagataattgtgttagctttctagtggtattggttt 30820698  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  30820699 gacttgaaaat 30820709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 32301891 - 32301781
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| ||||||||||||||||||||| |||| ||||||| |||||||| ||||||| |||||||| ||||  ||||||||    |||||||    
T  32301891 tgttcttgcgtctttttcacacatttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgagttagttttccagtgactttggttt 32301792  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  32301791 gacatgaaaat 32301781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 43277086 - 43277196
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||| | |||| ||||||| |||||||| ||||||| ||||||||||||| ||||| ||| |  |||||||    
T  43277086 tgttcttgcgtctttttcacacgtttctgttttaaattggcctttggtgtaaacatgaaagttgtagataattgtgttagctttcaagtggctttggttt 43277185  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  43277186 gacttgaaaat 43277196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 46386430 - 46386540
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| |||| ||| |||| ||||||||| |  |||||||    
T  46386430 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtctaaacatgaaagttgtagatagttgagttagctttccagtggctttggttt 46386529  T
Q  102 gacgtgaaaat 112  Q
    || ||||||||    
T  46386530 gaagtgaaaat 46386540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 47094789 - 47094679
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||  ||||||| |||||||| ||||||| |||||||| |||| ||||||||| |  ||| |||    
T  47094789 tgttcttgcgtctttttcacacgtttctgttttgaattgacctttggtgtaaacatgaaagttgtagataattgagttagctttccagtggctttgattt 47094690  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  47094689 gacgtgaaaat 47094679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 25926644 - 25926753
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||||||||| ||||| ||| |  || |||||    
T  25926644 gttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgtgttagctttctagtggctttagtttg 25926743  T
Q  103 acgtgaaaat 112  Q
    || |||||||    
T  25926744 acatgaaaat 25926753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 32160546 - 32160655
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| |||||||  |||||||||||| |||| ||||||| |||||||| ||||||| ||||||||| ||| ||||||||| |  ||||||||    
T  32160546 gttcttgcgtctttttcacatgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgtcttagctttccagtggctttggtttg 32160645  T
Q  103 acgtgaaaat 112  Q
    || |||||||    
T  32160646 acttgaaaat 32160655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 12323273 - 12323383
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||| ||| |||||||| |||||||||||| ||||| |||||| |||||||| ||||||| |||||||| |||| |||||| |  |  |||||||    
T  12323273 tgttcttgcatctttttcacacgtttctgttttgaattggtgtttggtgtaaacatgaaagttgtagataattgagttagctttccgggggctttggttt 12323372  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  12323373 gacgtgaaaat 12323383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 14928675 - 14928761
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||| | |||||||| ||||||| ||||||||||||| |||||||    
T  14928675 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttgctgtaaacatgaaagttgtagataattgtgttagctttcca 14928761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 15352141 - 15352227
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||| | |||||||| ||||||| ||||||||||||| |||||||    
T  15352141 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttgctgtaaacatgaaagttgtagataattgtgttagctttcca 15352227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 16580369 - 16580259
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| ||||||| |||| || ||||||||| |||||||| ||||||| ||||||||||||| |||| |||| |  || ||||    
T  16580369 tgttcttgcgtctttttcacacgtttctgtcttgaattagtctttggtgtaaacatgaaagttgtagataattgtgttagcttttcagtggcgttagttt 16580270  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  16580269 gacatgaaaat 16580259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 44374655 - 44374545
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||| ||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| |||||||| |||| |||||||||    |||||||    
T  44374655 tgttcttgcatctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgagttagctttccagtgactttggttt 44374556  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  44374555 gacatgaaaat 44374545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 44383520 - 44383410
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||| ||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| |||||||| |||| |||||||||    |||||||    
T  44383520 tgttcttgcatctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgagttagctttccagtgactttggttt 44383421  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  44383420 gacatgaaaat 44383410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 48213288 - 48213398
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| ||||| |||||| |||| ||||||| |||||||| ||||||| |||||||||||||  |||||| | |  |||||||    
T  48213288 tgttcttgcgtctttttcacacgtttctattttgaattggcctttggtgtaaacatgaaagttgtagataattgtgttagatttccattcgctttggttt 48213387  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  48213388 gacttgaaaat 48213398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 8514089 - 8514198
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||| | |||||||||||| |||| ||||||| |||||||| ||||||| |||||||||||||  |||| ||| |  |||||||    
T  8514089 tgttcttgcgtctttttcacccgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgtgttagatttcgagttgctttggttt 8514188  T
Q  102 gacgtgaaaa 111  Q
    ||| ||||||    
T  8514189 gacttgaaaa 8514198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 11303895 - 11303810
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| ||||||| |||||||  |||||||||||| |||||||||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  11303895 gttcttgcgtctttttcacatgtttctgttttgaattggtctttggtgtaaacatgaaagttgtagataattttgttagctttcca 11303810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 11661813 - 11661704
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||| | ||||||| ||||| ||||||| | |  ||||||||    
T  11661813 gttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttttagataattttgttagctttccaatggctttggtttg 11661714  T
Q  103 acgtgaaaat 112  Q
    || |||||||    
T  11661713 acttgaaaat 11661704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 14566702 - 14566625
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||||||||| |||||||    
T  14566702 gtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgtgttagctttcca 14566625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 29797258 - 29797173
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| ||||||| |||||||  |||||||||||| |||||||||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  29797258 gttcttgcgtctttttcacatgtttctgttttgaattggtctttggtgtaaacatgaaagttgtagataattttgttagctttcca 29797173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 29801077 - 29800992
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| ||||||| |||||||  |||||||||||| |||||||||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  29801077 gttcttgcgtctttttcacatgtttctgttttgaattggtctttggtgtaaacatgaaagttgtagataattttgttagctttcca 29800992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 46473758 - 46473665
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgac 104  Q
    |||| |||||||||||| |||||| | |||| ||||||| |||||||| ||||| | ||||||||||||| ||||||| |||| ||||||||||    
T  46473758 gtctttttcacacatttttgttttaaattggcctttggtgtaaacatgaaagttttagataattgtgttagctttccaatagttttggtttgac 46473665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 112
Target Start/End: Original strand, 4691245 - 4691349
Alignment:
Q  8 tgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtg 107  Q
    ||||||| ||||| || |||||||||||| || | |||||||||||||||| ||||||| |||||||||||||  |||||||| |  | |||||||| ||    
T  4691245 tgcgtctttttcatacgtttctgttttgaattagcctttggtataaacatgaaagttgtagataattgtgttagatttccagtggagtcggtttgacttg 4691344  T
Q  108 aaaat 112  Q
    |||||    
T  4691345 aaaat 4691349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 11392813 - 11392901
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagt 90  Q
    ||||| ||||||| |||||||| ||||| |||||| || | ||||||| |||||||| ||||||| ||||||||||||| |||||||||    
T  11392813 tgttcttgcgtctttttcacacgtttctattttgaattagcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagt 11392901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 112
Target Start/End: Original strand, 14188643 - 14188747
Alignment:
Q  8 tgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtg 107  Q
    ||||||| |||||||| ||||| |||||| |||||||||||| |||||||| ||||| | ||||||| ||||| ||||||| | |  |||||||||| ||    
T  14188643 tgcgtctttttcacacgtttcttttttgaattggtctttggtgtaaacatgaaagttttagataattttgttagctttccaatggctttggtttgacttg 14188742  T
Q  108 aaaat 112  Q
    |||||    
T  14188743 aaaat 14188747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 14317780 - 14317692
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagt 90  Q
    ||||| ||||||| |||||||| |||||||||||| |||| |||| || |||||||| ||||||| |||||||| |||| |||||||||    
T  14317780 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttagtgtaaacatgaaagttgtagataattgagttagctttccagt 14317692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 20488089 - 20488001
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagt 90  Q
    ||||| ||||||| |||||||| ||||| |||||| || | ||||||| |||||||| ||||||| ||||||||||||| |||||||||    
T  20488089 tgttcttgcgtctttttcacacgtttctcttttgaattagcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagt 20488001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 34957880 - 34957796
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttc 86  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||| ||||| |||||    
T  34957880 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattttgttagctttc 34957796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 39431571 - 39431659
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagt 90  Q
    ||||| ||||||| |||||||| ||| |||||||| |||| ||||||| |||||||| ||||||| ||||||||||||| |||| ||||    
T  39431571 tgttcttgcgtctttttcacacgtttatgttttgaattggcctttggtgtaaacatgaaagttgtagataattgtgttaacttttcagt 39431659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 112
Target Start/End: Original strand, 44190598 - 44190702
Alignment:
Q  8 tgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtg 107  Q
    ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| |||||||| |||| |||| || | |  |||||||||| ||    
T  44190598 tgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgcgttagcttttcaatggctttggtttgacttg 44190697  T
Q  108 aaaat 112  Q
    |||||    
T  44190698 aaaat 44190702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 86
Target Start/End: Original strand, 45847168 - 45847252
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttc 86  Q
    ||||| ||||||| |||||||| |||||||||||| || | ||||||| |||||||| ||||||| ||||||||||||| |||||    
T  45847168 tgttcttgcgtctttttcacacgtttctgttttgaattagcctttggtgtaaacatgaaagttgtagataattgtgttaactttc 45847252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 15576176 - 15576284
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||| | |||| ||||||| |||||||  ||||||| |||||||||  || ||||||||| |  |||||||    
T  15576176 tgttcttgcgtctttttcacacgtttctgttttcaattggcctttggtttaaacataaaagttgtagataattgt--tagctttccagtggctttggttt 15576273  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  15576274 gacgtgaaaat 15576284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 19282801 - 19282718
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatcttt 85  Q
    ||||| ||| ||| |||||||  |||||||||||| |||||||||||| |||||||| ||||||| ||||||||||||| ||||    
T  19282801 tgttcttgcatctttttcacatgtttctgttttgaattggtctttggtgtaaacatgaaagttgtagataattgtgttagcttt 19282718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 23664467 - 23664550
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttc 86  Q
    |||| ||||||| |||||||  |||||||||||| |||||||||||| |||||||| ||||||| ||||||| ||||| |||||    
T  23664467 gttcttgcgtctttttcacatgtttctgttttgaattggtctttggtgtaaacatgaaagttgtagataattttgttagctttc 23664550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 58761 - 58847
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    ||||| ||||||| |||||||| |||||||||||| |||| |||||||||||||||| ||||| |  |||||| ||||| |||||||    
T  58761 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtataaacatgaaagttttatataattttgttagctttcca 58847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 11067177 - 11067067
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||| | |||||||  |||||||||||| ||||  |||||| |||||||| ||||||| |||||||| |||| ||||||||| |  ||| |||    
T  11067177 tgttcttgcgtatttttcacatgtttctgttttgatttggcttttggtgtaaacatgaaagttgtagataattgagttagctttccagtggctttgattt 11067078  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  11067077 gacgtgaaaat 11067067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 13745119 - 13745229
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| || |||| |||||||| ||||||||||||  ||| ||||||| |||||||| ||||| | ||||||||||||| ||||| ||| |  |||||||    
T  13745119 tgttcttgtgtctttttcacacgtttctgttttgaactggcctttggtgtaaacatgaaagttttagataattgtgttagctttctagtggctttggttt 13745218  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  13745219 gacttgaaaat 13745229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 14161199 - 14161309
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||| ||| |||||||| |||||||||||| || | ||||||| |||||||| ||||||| |||||||||||||  |||||| | |  ||||||||    
T  14161199 gttcttgcatctttttcacacgtttctgttttgaattagcctttggtgtaaacatgaaagttgtagataattgtgttagatttccattggctttggtttg 14161298  T
Q  103 acgtgaaaatc 113  Q
    || ||||||||    
T  14161299 acttgaaaatc 14161309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 15214208 - 15214122
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    ||||| ||| ||| |||||||| ||||||||||||||||  ||||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  15214208 tgttcttgcatctttttcacacgtttctgttttgagttgacctttggtgtaaacatgaaagttgtagataattttgttagctttcca 15214122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 16108203 - 16108285
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatcttt 85  Q
    |||| ||||||| |||||||  |||||||||||| |||||||||||| |||||||| ||||||| ||||||| ||||| ||||    
T  16108203 gttcttgcgtctttttcacatgtttctgttttgaattggtctttggtgtaaacatgaaagttgtagataattttgttaccttt 16108285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 16999141 - 16999031
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| ||||| ||||||||||||||| || | ||||||| |||| ||| |||| || |||||||| |||| ||||||||| |  |||||||    
T  16999141 tgttcttgcgtctttttcatacatttctgttttgaattagcctttggtgtaaatatgaaagtagtagataattgagttagctttccagtggctttggttt 16999042  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  16999041 gacttgaaaat 16999031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 27217509 - 27217399
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| ||||| || |||||||||||| || | ||||||| |||||||| ||||||| ||||||||||||| |||| |||| |  | |||||    
T  27217509 tgttcttgcgtctttttcatacgtttctgttttgaattagcctttggtgtaaacatgaaagttgtagataattgtgttagctttacagtggcgtcggttt 27217410  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  27217409 gacttgaaaat 27217399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 32433932 - 32434042
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| |||||||| | ||   ||||| | |  |||||||    
T  32433932 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgagctagtgttccaatggctttggttt 32434031  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  32434032 gacgtgaaaat 32434042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 38828770 - 38828660
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||   |||||| |||||||| ||||||| ||||||| ||||| ||||||| | |  |||||||    
T  38828770 tgttcttgcgtctttttcacacgtttctgttttgaattgacatttggtgtaaacatgaaagttgtagataattttgttagctttccaatggctttggttt 38828671  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  38828670 gacttgaaaat 38828660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 10896346 - 10896423
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  10896346 gtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattttgttagctttcca 10896423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 14422485 - 14422408
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  14422485 gtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattttgttagctttcca 14422408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 18872860 - 18872783
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  18872860 gtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattttgttagctttcca 18872783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 20619995 - 20619886
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||| | |||||||| |||| |||| || |||| ||||||| |||||||| ||||||| |||||||| |||| |||||||||||  | ||| |    
T  20619995 tgttcttgcgtatttttcacacgtttccgtttggaattggcctttggtgtaaacatgaaagttgtagataattgagttagctttccagtagcttcggtgt 20619896  T
Q  102 gacgtgaaaa 111  Q
    ||||||||||    
T  20619895 gacgtgaaaa 20619886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 112
Target Start/End: Complemental strand, 25942137 - 25942036
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaa 110  Q
    |||| |||||||| |||||||||||| |||| ||||| | |||||||| ||||| | ||||||||||||| ||||| ||| |  |||||||||| |||||    
T  25942137 gtctttttcacacgtttctgttttgaattggcctttgctgtaaacatgaaagttttagataattgtgttagctttctagtggctttggtttgacttgaaa 25942038  T
Q  111 at 112  Q
    ||    
T  25942037 at 25942036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 14153314 - 14153425
Alignment:
Q  1 gtgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtt 100  Q
    |||||| ||||||| || ||||| |||||||||||| || ||||||||| |||||||  ||||||| ||||||| ||||| |||| || | |  ||||||    
T  14153314 gtgttcttgcgtcttttacacacgtttctgttttgaattagtctttggtgtaaacataaaagttgtagataattttgttagctttacaatggctttggtt 14153413  T
Q  101 tgacgtgaaaat 112  Q
    |||| |||||||    
T  14153414 tgacttgaaaat 14153425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 37727269 - 37727372
Alignment:
Q  1 gtgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtt 100  Q
    |||||| ||| ||| || ||||| |||||||||||| |||| ||||||| |||||||| |||||||  |||||| ||||| ||||||||| |  ||||||    
T  37727269 gtgttcttgcatcttttacacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtatataattttgttagctttccagtggctttggtt 37727368  T
Q  101 tgac 104  Q
    ||||    
T  37727369 tgac 37727372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 456969 - 456884
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    ||||| ||||||| |||||||| |||||||||||| ||   ||||||| |||||||| ||||||| ||||||||||||| |||||||    
T  456969 tgttcttgcgtctttttcacacgtttctgttttgaattaa-ctttggtgtaaacatgaaagttgtagataattgtgttagctttcca 456884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 4325765 - 4325655
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||| ||| ||| |||| |||||||||||| |||  ||||||| |||||||| | ||||| |||||||| |||| ||||||||| |  |||||||    
T  4325765 tgttcttgcatctttttaacacgtttctgttttgaattgacctttggtgtaaacatgaatgttgtagataattgcgttagctttccagtggctttggttt 4325666  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  4325665 gacttgaaaat 4325655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 12127506 - 12127584
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgtta 80  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| |||| || |||||||| ||||    
T  12127506 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagtagtagataattgagtta 12127584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 14259061 - 14258951
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| || ||||| |||||||||||| || | ||||||| |||||||  ||||||| |||||||| |||| ||||||||| |  ||| |||    
T  14259061 tgttcttgcgtcttttacacacgtttctgttttgaattagcctttggtgtaaacattaaagttgtagataattgagttagctttccagtggctttgcttt 14258962  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  14258961 gacatgaaaat 14258951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 110
Target Start/End: Original strand, 15119657 - 15119759
Alignment:
Q  8 tgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtg 107  Q
    ||||||| |||||||| ||||  |||||| |||| ||||||| |||||||| ||||||| |||||||||||||  |||| ||| |  |||||||||| ||    
T  15119657 tgcgtctttttcacacgtttcgattttgaattggcctttggtgtaaacatgaaagttgtagataattgtgttagatttctagtggctttggtttgacttg 15119756  T
Q  108 aaa 110  Q
    |||    
T  15119757 aaa 15119759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 24270325 - 24270435
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| ||| |||||||| |||| ||| ||| |||||||| ||||| | ||||||||||||| ||||| | | |  |||||||    
T  24270325 tgttcttgcgtctttttcacacgtttatgttttgaattggccttgggtgtaaacatgaaagttttagataattgtgttagctttcaaatggaattggttt 24270424  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  24270425 gacttgaaaat 24270435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 32126139 - 32126053
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    ||||| |||||||  ||||||| |||||||||||| || | ||||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  32126139 tgttcttgcgtcttgttcacacgtttctgttttgaattagcctttggtgtaaacatgaaagttgtagataattttgttagctttcca 32126053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 112
Target Start/End: Complemental strand, 15167675 - 15167574
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaa 110  Q
    |||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||| | ||||||| ||||| ||||| | | |  |||||||||| |||||    
T  15167675 gtctttttcacacgtttctgttttgaattggactttggtgtaaacatgaaagttttagataattttgttagctttctaatggctttggtttgacttgaaa 15167576  T
Q  111 at 112  Q
    ||    
T  15167575 at 15167574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 16009078 - 16009001
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||| || || |||||||    
T  16009078 gtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattttgctagctttcca 16009001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 47975258 - 47975364
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| || |||| ||||||||||||||||||||| |||  ||||||||    |||| ||||||| ||||||||||||| |||| |||| |  |||||||    
T  47975258 tgttcttgtgtctttttcacacatttctgttttgaattgacctttggta----catgaaagttgtagataattgtgttagcttttcagtggctttggttt 47975353  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  47975354 gacttgaaaat 47975364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 17070650 - 17070722
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||||||| |||||||||||| |||| ||||||| |||||||| ||||| | ||||||| ||||| |||||||    
T  17070650 tttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttttagataattttgttagctttcca 17070722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 16410706 - 16410619
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagt 90  Q
    |||| ||| ||| |||||||| |||||||||||| || | ||||||| |||||||  ||||||| ||||||||||||| |||| ||||    
T  16410706 gttcttgcatctttttcacacgtttctgttttgaattagcctttggtgtaaacataaaagttgtagataattgtgttagctttacagt 16410619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #96
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 120
Target Start/End: Complemental strand, 37539117 - 37538999
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtc-ttggtt 100  Q
    ||||| || |||| |||||||| |||||||||||| |||| |||| || |||||||| ||||| | ||||||| ||||| ||||||| | ||| ||||||    
T  37539117 tgttcttgggtctttttcacacgtttctgttttgaattggccttttgtgtaaacatgaaagttttagataattttgttagctttccaat-gtctttggtt 37539019  T
Q  101 tgacgtgaaaatcttttgtg 120  Q
    |||| | ||||| |||||||    
T  37539018 tgacttaaaaatgttttgtg 37538999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #97
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 11 - 85
Target Start/End: Complemental strand, 148118 - 148044
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatcttt 85  Q
    |||| |||||||| |||||||||||| |||| ||||||| || ||||| ||||||| ||||||| ||||| ||||    
T  148118 gtctttttcacacgtttctgttttgaattggcctttggtgtacacatgaaagttgtagataattctgttagcttt 148044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #98
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 14105810 - 14105920
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||  |||||||  |||||| |||||  |||  |||||| |||||||| ||||||| ||||||| ||||| ||||||| | |  |||||||    
T  14105810 tgttcttgcgtcagtttcacatgtttctgctttgaactgggttttggtgtaaacatgaaagttgtagataattttgttagctttccaatggctttggttt 14105909  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  14105910 gacgtgaaaat 14105920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #99
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 32772037 - 32771951
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    ||||| || |||| ||||| || |||||||||||| |||  ||||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  32772037 tgttcttgtgtctttttcatacgtttctgttttgaattgacctttggtgtaaacatgaaagttgtagataattttgttagctttcca 32771951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #100
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 112
Target Start/End: Complemental strand, 11309977 - 11309908
Alignment:
Q  43 ctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    ||||||| |||||||| ||||||| ||||||||||||| ||||||| | |  |||||||||| |||||||    
T  11309977 ctttggtgtaaacatgaaagttgtagataattgtgttagctttccattggctttggtttgacttgaaaat 11309908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #101
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 86
Target Start/End: Original strand, 10000973 - 10001035
Alignment:
Q  24 atttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttc 86  Q
    ||||||||||||| || | ||||||| |||||||| ||||||| ||||||| ||||| |||||    
T  10000973 atttctgttttgattttgactttggtgtaaacatgaaagttgtagataattttgttagctttc 10001035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #102
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 17505347 - 17505457
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| ||||||   |||||| |||||  |||  |||||| |||||||| ||||||| ||||||| ||||| ||||||| |    |||||||    
T  17505347 tgttcttgcgtctgtttcacgtgtttctgctttgaactgggttttggtgtaaacatgaaagttgtagataattttgttagctttccaatgactttggttt 17505446  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  17505447 gacgtgaaaat 17505457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #103
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 17547867 - 17547757
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| ||||||   |||||| |||||  |||  |||||| |||||||| ||||||| ||||||| ||||| ||||||| |    |||||||    
T  17547867 tgttcttgcgtctgtttcacgtgtttctgctttgaactgggttttggtgtaaacatgaaagttgtagataattttgttagctttccaatgactttggttt 17547768  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  17547767 gacgtgaaaat 17547757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #104
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 16383247 - 16383178
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatcttt 85  Q
    |||||| |||||| ||||||| |||||||||||| ||| |||| ||||| | ||||||| ||||| ||||    
T  16383247 tttcacccatttccgttttgaattggtctttggtgtaagcatgaaagttttagataattttgttagcttt 16383178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #105
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 112
Target Start/End: Original strand, 20252750 - 20252795
Alignment:
Q  67 tgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    |||||||||| ||| ||||||||| || ||||||||||||||||||    
T  20252750 tgataattgtattagctttccagtggttttggtttgacgtgaaaat 20252795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #106
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 8563941 - 8564017
Alignment:
Q  9 gcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatcttt 85  Q
    |||||| |||||||| ||||| |||||| |||  ||||||| || ||||| ||||| | ||||||||||||| ||||    
T  8563941 gcgtctttttcacacgtttctattttgaattgacctttggtgtacacatgaaagttttagataattgtgttagcttt 8564017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #107
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 8756781 - 8756849
Alignment:
Q  44 tttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    ||||||||||||||| ||||| | ||||||| ||||| ||||||| | |  |||||||||| |||||||    
T  8756781 tttggtataaacatgaaagttttagataattttgttagctttccaatggatttggtttgacttgaaaat 8756849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #108
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 13699274 - 13699342
Alignment:
Q  44 tttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    ||||||||||||||| ||| | | ||||||||||||| ||||||| | |  |||||||||| |||||||    
T  13699274 tttggtataaacatgaaagctttagataattgtgttagctttccaatggatttggtttgacttgaaaat 13699342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #109
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 15978413 - 15978485
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||||| | |||| ||||||| ||||  |||||| |||||||| ||||| | ||||||||||||| |||||||    
T  15978413 tttcacccgtttccgttttgaattggcttttggtgtaaacatgaaagttttagataattgtgttagctttcca 15978485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #110
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 18080075 - 18080171
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    |||||| |||||||||||||| |||| ||| ||| |||||||  || || | ||||||||||||| |||| |||| |  ||| |||||| |||||||    
T  18080075 tttcacgcatttctgttttgaattggccttcggtgtaaacattaaatttttagataattgtgttagctttacagtggctttgatttgacttgaaaat 18080171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #111
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 26355495 - 26355571
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgt 78  Q
    ||||| ||||||| |||||||| |||| |||||||  |||  |||||| |||| ||| ||||||| |||||||||||    
T  26355495 tgttcttgcgtctttttcacacttttccgttttgaactgggttttggtgtaaaaatgaaagttgtagataattgtgt 26355571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #112
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 26357947 - 26358023
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgt 78  Q
    ||||| ||||||| |||||||| |||| |||||||  |||  |||||| |||| ||| ||||||| |||||||||||    
T  26357947 tgttcttgcgtctttttcacacttttccgttttgaactgggttttggtgtaaaaatgaaagttgtagataattgtgt 26358023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 119; Significance: 6e-61; HSPs: 72)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 45 - 235
Target Start/End: Original strand, 22310225 - 22310412
Alignment:
Q  45 ttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaatcttttgtgtataatttaacannnnnnnnnatg 144  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||         | |    
T  22310225 ttggtgtaaacatgaaagttgttgataattgtgttatctttccagtagtcttggtttgacatgaaaatcttttgtggataatttaaca--tgtttttacg 22310322  T
Q  145 aagatgtatgaatgaattattgttgttaaatatgatgtctatatgatgttattcatggttgatgaatagtgagattatgttgcgaagttga 235  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||| |||||||||||    
T  22310323 aagatgtatgaatgaattattgttgttaaatatgatgtctatatgatgttattcat-gttaatgaattgtgagattatgatgcgaagttga 22310412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 3 - 128
Target Start/End: Original strand, 12037800 - 12037925
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| ||||| || |||||| ||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||    
T  12037800 gttcttgcgtctgtttcatacgtttctgctttgagttggtctttggtataaacatgaaagttgctgataattgtattatctttccagtagtcttggtttg 12037899  T
Q  103 acgtgaaaatcttttgtgtataattt 128  Q
     | |||||||||||| ||||||||||    
T  12037900 gcatgaaaatcttttatgtataattt 12037925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 3 - 223
Target Start/End: Complemental strand, 20879050 - 20878833
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatct-ttccagtagtcttggttt 101  Q
    |||| ||||||| |||||||| ||||||||||||| ||| |||| ||||||||||  ||||| ||||||||| |||||||| ||||||||| ||||||||    
T  20879050 gttcttgcgtctgtttcacacgtttctgttttgagctggcctttagtataaacataaaagttattgataattatgttatctcttccagtagccttggttt 20878951  T
Q  102 gacgtgaaaatcttttgtgtataatttaacannnnnnnnnatgaagatgtatgaatgaattattgttgttaaatatgatgtctatatgatgttattcatg 201  Q
    ||||||||||||||||||| ||||||||| |         | ||||||||||| || |||| | |||||| ||||||||| |||||||||| ||||| |     
T  20878950 gacgtgaaaatcttttgtggataatttaata--tgtttttacgaagatgtatg-ataaattgtggttgtttaatatgatgcctatatgatgctattcct- 20878855  T
Q  202 gttgatgaatagtgagattatg 223  Q
    ||| |||||| |||||||||||    
T  20878854 gttaatgaattgtgagattatg 20878833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 16198542 - 16198433
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| ||||||||||||||||||||| |||| ||||||| |||||||| |||||||  |||||||||||| ||||||||| |  ||||||||    
T  16198542 gttcttgcgtctttttcacacatttctgttttgaattggcctttggtgtaaacatgaaagttgtatataattgtgttagctttccagtggctttggtttg 16198443  T
Q  103 acgtgaaaat 112  Q
    || |||||||    
T  16198442 acttgaaaat 16198433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 23883564 - 23883436
Alignment:
Q  1 gtgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtt 100  Q
    |||||| ||||||| |||| ||| ||||||||||||||||  |||| || |||| ||| || || |||||||||| ||||| |||||||||| |||||||    
T  23883564 gtgttcttgcgtctgtttcgcacgtttctgttttgagttgccctttagtgtaaatatgaaaattattgataattgagttatttttccagtagccttggtt 23883465  T
Q  101 tgacgtgaaaatcttttgtgtataattta 129  Q
    |||||||| || |||||||| ||||||||    
T  23883464 tgacgtgataaccttttgtggataattta 23883436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 5761242 - 5761132
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| ||| |||| |||||||||||| |||| ||||||| |||||||| ||||||| |||||||| |||| ||||||||| |  |||||||    
T  5761242 tgttcttgcgtctttttaacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtcgataattgagttagctttccagtggctttggttt 5761143  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  5761142 gacgtgaaaat 5761132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 6573400 - 6573510
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| ||||||||||||||||||||| |||  ||||||| |||||||| ||||||| ||||||||||||| |||||| || |  |||||||    
T  6573400 tgttcttgcgtctttttcacacatttctgttttgaattgccctttggtgtaaacatgaaagttgtagataattgtgttagctttccggtggctttggttt 6573499  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  6573500 gacttgaaaat 6573510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 22207976 - 22207866
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| |||||||  |||||||||||| ||||||||| |  |||||||    
T  22207976 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtaaataattgtgttagctttccagtggctttggttt 22207877  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  22207876 gacttgaaaat 22207866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 36732867 - 36732977
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| |||||||| |||| ||||||||| |  |||||||    
T  36732867 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgagttagctttccagtggctttggttt 36732966  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  36732967 gacttgaaaat 36732977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 129
Target Start/End: Complemental strand, 23886017 - 23885920
Alignment:
Q  32 tttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaatcttttgtgtataattta 129  Q
    |||||||| |||||| || |||  ||| || || ||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||    
T  23886017 tttgagttagtctttagtgtaagtatgaaaattattgataattgtgttatctttccagtagccttggtttgacgtgaaaaccttttgtggataattta 23885920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 112
Target Start/End: Complemental strand, 36305361 - 36305257
Alignment:
Q  8 tgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtg 107  Q
    ||||||| ||||||||||||||||||||| |||| ||||||| |||||||| ||||| | ||||||||||||| ||||||||| |  || ||||||| ||    
T  36305361 tgcgtctttttcacacatttctgttttgatttggcctttggtgtaaacatgaaagttttagataattgtgttagctttccagtggctttagtttgacttg 36305262  T
Q  108 aaaat 112  Q
    |||||    
T  36305261 aaaat 36305257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 1485050 - 1484940
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| || | ||||||| |||||||| ||||||| ||||||||||||| ||||||||| |  | |||||    
T  1485050 tgttcttgcgtctttttcacacgtttctgttttgaattagcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagtggcgtcggttt 1484951  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  1484950 gacttgaaaat 1484940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 4381136 - 4381246
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||||||||| ||||| ||| |  || ||||    
T  4381136 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgtgttagctttctagtggctttagttt 4381235  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  4381236 gacttgaaaat 4381246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 18834180 - 18834070
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||||||||| |||| |||| |  |||||||    
T  18834180 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgtgttagcttttcagtggctttggttt 18834081  T
Q  102 gacgtgaaaat 112  Q
     || |||||||    
T  18834080 tacttgaaaat 18834070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 108
Target Start/End: Complemental strand, 19140466 - 19140368
Alignment:
Q  10 cgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtga 108  Q
    ||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| |||||||| |||| ||||||||| |  ||||||||||||||    
T  19140466 cgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgagttagctttccagtggctttggtttgacgtga 19140368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 22258647 - 22258757
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| ||| | |||||| |||| ||||||| |||||||| ||||||| ||||||||||||| ||||||||| |  |||||||    
T  22258647 tgttcttgcgtctttttcacacctttattttttgaattggcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagtggctttggttt 22258746  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  22258747 gacttgaaaat 22258757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 22483455 - 22483345
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| ||||||||||||||||||||| |||| ||||||| |||||||| ||||| | ||||||||||| | ||||||| | |  |||||||    
T  22483455 tgttcatgcgtctttttcacacatttctgttttgaattggcctttggtgtaaacatgaaagttttagataattgtgtaagctttccaatggctttggttt 22483356  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  22483355 gacttgaaaat 22483345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 44432571 - 44432461
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||  ||||||| |||||||| ||||||| ||||||| ||||| ||||||||| |  |||||||    
T  44432571 tgttcttgcgtctttttcacacgtttctgttttgaattgacctttggtgtaaacatgaaagttgtagataattttgttagctttccagtggctttggttt 44432472  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  44432471 gacttgaaaat 44432461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 26454419 - 26454310
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||| ||| |||||||| |||||||||||| ||||  |||||| |||||||| ||||||| ||||||||||||| ||||||||| |  ||||||||    
T  26454419 gttcttgcatctttttcacacgtttctgttttgaattggcttttggtgtaaacatgaaagttgtagataattgtgttagctttccagtggcattggtttg 26454320  T
Q  103 acgtgaaaat 112  Q
    || |||||||    
T  26454319 acttgaaaat 26454310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 11 - 112
Target Start/End: Original strand, 45559528 - 45559629
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaa 110  Q
    |||| |||||||||||| |||||||| |||| ||||||| |||||||| ||||| | ||||||||||||| ||||||| | || |||||||||| |||||    
T  45559528 gtctttttcacacatttatgttttgaattggcctttggtgtaaacatgaaagttttagataattgtgttagctttccaattgttttggtttgacttgaaa 45559627  T
Q  111 at 112  Q
    ||    
T  45559628 at 45559629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 4483928 - 4483840
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagt 90  Q
    ||||| ||||||| |||||||| |||||||||||| || |||||| || |||||||| ||||||| ||||||||||||| |||||||||    
T  4483928 tgttcttgcgtctttttcacacgtttctgttttgaattagtctttagtgtaaacatgaaagttgtagataattgtgttagctttccagt 4483840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 38989159 - 38989064
Alignment:
Q  17 ttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    ||||||| |||||||||||| |||| ||||||| |||||||| || |||| ||||||||||||| ||||||||| |  |||||||||| |||||||    
T  38989159 ttcacacgtttctgttttgaattggcctttggtgtaaacatgaaaattgtagataattgtgttagctttccagtggctttggtttgacttgaaaat 38989064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 39020256 - 39020161
Alignment:
Q  17 ttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    ||||||| |||||||||||| |||| ||||||| |||||||| || |||| ||||||||||||| ||||||||| |  |||||||||| |||||||    
T  39020256 ttcacacgtttctgttttgaattggcctttggtgtaaacatgaaaattgtagataattgtgttagctttccagtggctttggtttgacttgaaaat 39020161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 5082555 - 5082665
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| || |||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||| | |||||||| |||| ||||||||| || |||||||    
T  5082555 tgttcttgtgtctttttcacacgtttctgttttgaattggactttggtgtaaacatgaaagttttagataattgagttagctttccagtggttttggttt 5082654  T
Q  102 gacgtgaaaat 112  Q
     || |||||||    
T  5082655 aacatgaaaat 5082665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 5852806 - 5852916
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| || | ||||||| |||||||| ||||||| ||||||||||||| |||| |||| |  | |||||    
T  5852806 tgttcttgcgtctttttcacacgtttctgttttgaattagcctttggtgtaaacatgaaagttgtagataattgtgttagctttacagtggcgtcggttt 5852905  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  5852906 gacttgaaaat 5852916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 6102096 - 6102206
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| ||||||   ||||||| |||||||| |||| ||||||||| |  |||||||    
T  6102096 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacacaaaagttgtagataattgagttagctttccagtggctttggttt 6102195  T
Q  102 gacgtgaaaat 112  Q
    |||||| ||||    
T  6102196 gacgtgcaaat 6102206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 14408958 - 14409068
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| || | ||||||| |||||||| ||||||| ||||||||||||| |||| |||| |  | |||||    
T  14408958 tgttcttgcgtctttttcacacgtttctgttttgaattagcctttggtgtaaacatgaaagttgtagataattgtgttagctttacagtggcgtcggttt 14409057  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  14409058 gacttgaaaat 14409068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 18024038 - 18024124
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  18024038 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattttgttagctttcca 18024124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 20178864 - 20178974
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||| ||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| |||||||| |||| |||||||||    |||||||    
T  20178864 tgttcttgcatctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgagttagctttccagtgactttggttt 20178963  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  20178964 gacatgaaaat 20178974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 38185429 - 38185515
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  38185429 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattttgttagctttcca 38185515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 42818250 - 42818360
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| || |||| |||||||| |||||||||||| |||||||||| | |||||||| ||||||| |||||||| ||||  |||||||| |  || ||||    
T  42818250 tgttcttgtgtctttttcacacgtttctgttttgaattggtctttgatgtaaacatgaaagttgtagataattgagttagatttccagtggctttagttt 42818349  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  42818350 gacgtgaaaat 42818360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 45290061 - 45290171
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| ||| |||| |||||||||||| || | ||||||| |||||||| ||||||| ||||||||||||| ||||||||| |  | |||||    
T  45290061 tgttcttgcgtctctttgacacgtttctgttttgaattagcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagtggcgtcggttt 45290160  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  45290161 gacttgaaaat 45290171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 8414093 - 8414178
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  8414093 gttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattttgttagctttcca 8414178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 23914632 - 23914544
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagt 90  Q
    ||||| ||||||| |||||||| ||||| |||||| || | ||||||| |||||||| ||||||| ||||||||||||| |||||||||    
T  23914632 tgttcttgcgtctttttcacacgtttctattttgaattagcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagt 23914544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 22147119 - 22147036
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttc 86  Q
    |||| ||||||| ||||||  ||||||||||||| |||| |||||||||||||||| ||||| | ||||||||||||| |||||    
T  22147119 gttcttgcgtctttttcacctatttctgttttgaattggactttggtataaacatgaaagttttagataattgtgttagctttc 22147036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 25295842 - 25295731
Alignment:
Q  1 gtgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtt 100  Q
    |||||| || |||| ||||||||||||||||||||| |||| ||||||| |||||||| ||||| | ||||||||||||   ||| || | || ||||||    
T  25295842 gtgttcttgtgtctttttcacacatttctgttttgaattggcctttggtgtaaacatgaaagttatagataattgtgttggtttttcaatggttttggtt 25295743  T
Q  101 tgacgtgaaaat 112  Q
    |||| |||||||    
T  25295742 tgacttgaaaat 25295731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 25757862 - 25757751
Alignment:
Q  1 gtgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtt 100  Q
    |||||| || |||| ||||||||||||||||||||| |||| ||||||| |||||||| ||||| | ||||||||||||   ||| || | || ||||||    
T  25757862 gtgttcttgtgtctttttcacacatttctgttttgaattggcctttggtgtaaacatgaaagttatagataattgtgttggtttttcaatggttttggtt 25757763  T
Q  101 tgacgtgaaaat 112  Q
    |||| |||||||    
T  25757762 tgacttgaaaat 25757751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 17978760 - 17978870
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| ||||||| |||| |||||| | |||| ||||||| |||||||| ||||||| |||||||||||||   ||||||| |  |||||||    
T  17978760 tgttcttgcgtctttttcacatatttatgtttttaattggcctttggtgtaaacatgaaagttgtagataattgtgttagagttccagtggctttggttt 17978859  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  17978860 gacttgaaaat 17978870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 112
Target Start/End: Original strand, 20045717 - 20045819
Alignment:
Q  10 cgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaa 109  Q
    ||||| |||||||| ||| |||||||| || | ||||||| |||||||| ||||||| ||||||||||||| ||||||||| |  | |||||||| ||||    
T  20045717 cgtctttttcacacgtttatgttttgaattagcctttggtctaaacatgaaagttgtagataattgtgttagctttccagtggcgtcggtttgacttgaa 20045816  T
Q  110 aat 112  Q
    |||    
T  20045817 aat 20045819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 21399419 - 21399309
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||  ||||||| |||||||| ||||||| |||||||| ||||  |||||| | |  | |||||    
T  21399419 tgttcttgcgtctttttcacacgtttctgttttgaattgtcctttggtgtaaacatgaaagttgtagataattgagttagttttccaatggattcggttt 21399320  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  21399319 gacgtgaaaat 21399309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 21793912 - 21793802
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||  ||||||| |||||||| ||||||| |||||||| ||||  |||||| | |  | |||||    
T  21793912 tgttcttgcgtctttttcacacgtttctgttttgaattgtcctttggtgtaaacatgaaagttgtagataattgagttagttttccaatggattcggttt 21793813  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  21793812 gacgtgaaaat 21793802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 39936354 - 39936464
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||| ||| ||| |||| |||||||||||| |||| |||| || |||||||| ||||||| |||||||| |||| |||||| || |  |||||||    
T  39936354 tgttcttgcatctttttaacacgtttctgttttgaattggcctttagtgtaaacatgaaagttgtagataattgagttagctttccggtggctttggttt 39936453  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  39936454 gacgtgaaaat 39936464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 11775430 - 11775353
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgtta 80  Q
    |||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||| |||||    
T  11775430 gttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattttgtta 11775353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 112
Target Start/End: Original strand, 19331929 - 19332030
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaa 110  Q
    |||| |||||||| |||||||||||| |||| ||||||| |||||| | ||||| | ||||||||||||| |||| || |||| || ||||||| |||||    
T  19331929 gtctttttcacacgtttctgttttgaattggcctttggtgtaaacaagaaagttttagataattgtgttagctttgcaatagtttttgtttgacttgaaa 19332028  T
Q  111 at 112  Q
    ||    
T  19332029 at 19332030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 23478788 - 23478679
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| |||||||| |||||||||||| |||   ||| || |||||||| ||||||| ||||||||||||| ||||||||| |  | ||||||    
T  23478788 gttcttgcgtctttttcacacgtttctgttttgaattgactttttgtgtaaacatgaaagttgtagataattgtgttacctttccagtggcttgggtttg 23478689  T
Q  103 acgtgaaaat 112  Q
    || |||||||    
T  23478688 acttgaaaat 23478679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 36405403 - 36405488
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcc 87  Q
    ||||| ||||||| |||||||| |||||||||||| |||  ||||||| |||||||| || |||| ||||||||||||| ||||||    
T  36405403 tgttcttgcgtctttttcacacgtttctgttttgaattgacctttggtgtaaacatgaaaattgtagataattgtgttagctttcc 36405488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 44477124 - 44477047
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  44477124 gtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattttgttagctttcca 44477047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 44480386 - 44480309
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  44480386 gtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattttgttagctttcca 44480309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 8728294 - 8728366
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  8728294 tttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattttgttagctttcca 8728366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 106
Target Start/End: Original strand, 223280 - 223375
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgt 106  Q
    |||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||| | ||| ||||| | | | |||||||||||||    
T  223280 gtctttttcacacgtttctgttttgaattggactttggtgtaaacatgaaagttgtagataattttattagctttctaatggccttggtttgacgt 223375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 106
Target Start/End: Original strand, 688051 - 688146
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgt 106  Q
    |||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||| | ||| ||||| | | | |||||||||||||    
T  688051 gtctttttcacacgtttctgttttgaattggactttggtgtaaacatgaaagttgtagataattttattagctttctaatggccttggtttgacgt 688146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 106
Target Start/End: Original strand, 736903 - 736998
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgt 106  Q
    |||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||| | ||| ||||| | | | |||||||||||||    
T  736903 gtctttttcacacgtttctgttttgaattggactttggtgtaaacatgaaagttgtagataattttattagctttctaatggccttggtttgacgt 736998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 106
Target Start/End: Original strand, 860798 - 860893
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgt 106  Q
    |||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||| | ||| ||||| | | | |||||||||||||    
T  860798 gtctttttcacacgtttctgttttgaattggactttggtgtaaacatgaaagttgtagataattttattagctttctaatggccttggtttgacgt 860893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 17795934 - 17795855
Alignment:
Q  9 gcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||||| |||||||| |||||||||||| ||||  |||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  17795934 gcgtctttttcacacgtttctgttttgaattggcatttggtgtaaacatgaaagttgtagataattttgttagctttcca 17795855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 14824423 - 14824313
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| ||| | || |||||||||||| || | ||||||| |||||||| ||||||| ||||||||||||| |||| |||| |  | |||||    
T  14824423 tgttcttgcgtcttttttatacgtttctgttttgaattagcctttggtgtaaacatgaaagttgtagataattgtgttagctttacagtggcgtcggttt 14824324  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  14824323 gacttgaaaat 14824313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 21514020 - 21513950
Alignment:
Q  10 cgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgtta 80  Q
    ||||| |||||||| |||||||||||| |||  ||||||| |||||||| ||||||| |||||||||||||    
T  21514020 cgtctttttcacacgtttctgttttgaattgacctttggtgtaaacatgaaagttgtagataattgtgtta 21513950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 25483817 - 25483903
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    ||||| ||||||| |||||||| |||||||||||| |||  ||||||| |||||||| ||||| | ||||||| ||||| |||||||    
T  25483817 tgttcttgcgtctttttcacacgtttctgttttgaattgacctttggtgtaaacatgaaagttttagataattttgttagctttcca 25483903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 22474460 - 22474375
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcc 87  Q
    ||||| ||||||| |||||||  |||||||||||| |||| |||| || ||| |||| ||||||| ||||||||||||| ||||||    
T  22474460 tgttcttgcgtctttttcacatgtttctgttttgaattggcctttagtgtaagcatgaaagttgtagataattgtgttagctttcc 22474375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 25657858 - 25657923
Alignment:
Q  1 gtgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgt 66  Q
    |||||| ||||||| |||||||  |||||||||||| |||||||||||| |||||||| |||||||    
T  25657858 gtgttcttgcgtctttttcacatgtttctgttttgaattggtctttggtgtaaacatgaaagttgt 25657923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 27941241 - 27941318
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||| | ||||||| ||||| |||||||    
T  27941241 gtctttttcacacgtttctgttttgaattggcctttggtgtaaacatggaagttttagataattttgttagctttcca 27941318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 120
Target Start/End: Complemental strand, 22313526 - 22313422
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaatctt 115  Q
    |||||| |||||||||||||| |||| ||||||| ||| |||| ||||| | ||||||| ||||| ||||||| | ||   |||||||| ||||||| ||    
T  22313526 tttcacccatttctgttttgaattggcctttggtgtaatcatgaaagttttagataattttgttagctttccaatggttccggtttgacttgaaaatgtt 22313427  T
Q  116 ttgtg 120  Q
    |||||    
T  22313426 ttgtg 22313422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 112
Target Start/End: Original strand, 17437684 - 17437771
Alignment:
Q  25 tttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    |||||||||||| ||||  |||  |||||||||| ||||||| |||||||| |||| ||||||||| |  |||||||||||| |||||    
T  17437684 tttctgttttgaattggcattttctataaacatgaaagttgtagataattgagttagctttccagtggctttggtttgacgtaaaaat 17437771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 85
Target Start/End: Original strand, 42559871 - 42559954
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatcttt 85  Q
    ||||| ||| ||| |||||||| ||||||||||||||||   |||||| |||||||| ||||||| ||||||| ||||| ||||    
T  42559871 tgttcttgcatctttttcacacgtttctgttttgagttgacttttggtgtaaacatgaaagttgtagataattttgttagcttt 42559954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 364497 - 364411
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    ||||| ||||||| |||| ||| |||||||||||| |||  ||| ||| |||||||| ||||||| ||||||| ||||| |||||||    
T  364497 tgttcttgcgtctttttcgcacgtttctgttttgaattgaccttgggtgtaaacatgaaagttgtggataattttgttagctttcca 364411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 18677578 - 18677664
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    ||||| ||||||| |||||||| ||||||||||||  |||  |||||| |||| ||| ||||||| ||||||| ||||| |||||||    
T  18677578 tgttcttgcgtctttttcacacgtttctgttttgaactgggttttggtgtaaaaatgaaagttgtagataattttgttacctttcca 18677664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 14397268 - 14397340
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    ||||||||  ||||||||||| |||| ||||||| |||| ||| ||||||| ||||||| ||||| |||||||    
T  14397268 tttcacacgcttctgttttgaattggcctttggtgtaaaaatgaaagttgtagataattttgttagctttcca 14397340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 18612096 - 18612017
Alignment:
Q  1 gtgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgtta 80  Q
    |||||| ||||||| ||||||  |||||| |||||| |||| |||| || |||||||| ||||| | |||||||||||||    
T  18612096 gtgttcttgcgtctttttcacctatttctattttgaattggcctttcgtgtaaacatgaaagttttagataattgtgtta 18612017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 18618971 - 18618889
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttc 86  Q
    |||| ||| ||| ||||||  ||||||||||||| |||| ||||||| |||||||| ||||| ||||||||| ||||| |||||    
T  18618971 gttcttgcatctttttcacctatttctgttttgaattggactttggtgtaaacatgaaagtt-ttgataattttgttagctttc 18618889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 21860980 - 21861035
Alignment:
Q  19 cacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataatt 74  Q
    ||||| |||||||||||| |||| ||||||| |||||||| ||||||| |||||||    
T  21860980 cacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataatt 21861035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 22002401 - 22002291
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||| ||| |||||||||||||||||||||  |||  ||| || |||| ||| ||||||| |||||||  |||| ||||||| | |  |||||||    
T  22002401 tgttcttgcttctttttcacacatttctgttttgaactgggtttttgtgtaaaaatgaaagttgtagataatttggttagctttccaatggctttggttt 22002302  T
Q  102 gacgtgaaaat 112  Q
    ||||| |||||    
T  22002301 gacgtaaaaat 22002291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 24907482 - 24907381
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| |||||||||||| | |||||| |||  ||||||| |||||||| | ||| |  |||||||||||| ||||| ||| |  ||||||||    
T  24907482 gttcttgcgtctttttcacacatttatattttgaattgacctttggtgtaaacatgaatgttttatataattgtgttagctttctagtggctttggtttg 24907383  T
Q  103 ac 104  Q
    ||    
T  24907382 ac 24907381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 20454934 - 20454862
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||||| | |||||||||||| || |  |||||| |||||||| ||||||| |||||||| |||| |||||||    
T  20454934 tttcacccttttctgttttgaatttgcttttggtgtaaacatgaaagttgtagataattgagttagctttcca 20454862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 119; Significance: 6e-61; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 21190010 - 21190241
Alignment:
Q  1 gtgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtt 100  Q
    |||||| ||||||| |||||||| ||||| ||||||||||||||||  | |||||||| |||||| |||||||||||||||||||||||||| |||||||    
T  21190010 gtgttcttgcgtctgtttcacacgtttctattttgagttggtctttattgtaaacatgaaagttgatgataattgtgttatctttccagtagccttggtt 21190109  T
Q  101 tgacgtgaaaatcttttgtgtataatttaacannnnnnnnnatgaagatgtatgaatgaattattgttgttaaatatgatgtctatatgatgttattcat 200  Q
    |||||||| ||||||||||| |||||||||||         | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  21190110 tgacgtgataatcttttgtggataatttaaca--tgtttttacgaagatgtatgaatgaattattgttgttaaatatgatgcctatatgatgttattcat 21190207  T
Q  201 ggttgatgaatagtgagattatgttgcgaagttga 235  Q
     ||| |||||| | ||||| ||| |||||||||||    
T  21190208 -gttaatgaattgcgagatcatgatgcgaagttga 21190241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 130
Target Start/End: Complemental strand, 35893636 - 35893509
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| ||||| || |||||||||| | ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||    
T  35893636 gttcttgcgtctgtttcatacgtttctgttttaaattggtctttggtataaatatgaaagttgttgataattgtgttatctttccagtagccttggtttg 35893537  T
Q  103 acgtgaaaatcttttgtgtataatttaa 130  Q
    | ||||||| |||||||| |||||||||    
T  35893536 atgtgaaaaccttttgtggataatttaa 35893509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 3 - 120
Target Start/End: Original strand, 21244371 - 21244488
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| ||||| || ||||| |||||| || | |||| ||| ||||||| ||||||||||||||| ||||||||||||||||| |||||||||    
T  21244371 gttcttgcgtctgtttcatacgtttctattttgaattagccttttgtacaaacatgaaagttgttgataattatgttatctttccagtagccttggtttg 21244470  T
Q  103 acgtgaaaatcttttgtg 120  Q
    || |||||||||||||||    
T  21244471 acatgaaaatcttttgtg 21244488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 4596188 - 4596298
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| |||||||| |||| ||||||||| |  |||||||    
T  4596188 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgagttagctttccagtggctttggttt 4596287  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  4596288 gacgtgaaaat 4596298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 19676420 - 19676310
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| |||||||| |||| ||||||||| || || |||     
T  19676420 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgagttagctttccagtggttttagttg 19676321  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  19676320 gacgtgaaaat 19676310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 12710596 - 12710495
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| |||||||| |||||||||||| |||| |||||||||||||||| ||||| | ||||||||||||| ||||||||| |  ||||||||    
T  12710596 gttcttgcgtctttttcacacgtttctgttttgaattggcctttggtataaacatgaaagttttagataattgtgttagctttccagtggcgttggtttg 12710497  T
Q  103 ac 104  Q
    ||    
T  12710496 ac 12710495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 42912745 - 42912649
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| |||||||| |||| ||||||||| |  ||||||||||||||||||    
T  42912745 tttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgagttagctttccagtggctttggtttgacgtgaaaat 42912649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 21180667 - 21180778
Alignment:
Q  1 gtgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtt 100  Q
    |||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||| ||||| ||||||| | |  ||||||    
T  21180667 gtgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattttgttagctttccaatggatttggtt 21180766  T
Q  101 tgacgtgaaaat 112  Q
    |||| |||||||    
T  21180767 tgacttgaaaat 21180778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 13989514 - 13989404
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| || | ||||||| |||||||| ||||||| ||||||||||||| ||||||||| |  | |||||    
T  13989514 tgttcttgcgtctttttcacacgtttctgttttgaattagcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagtggcgtcggttt 13989415  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  13989414 gacttgaaaat 13989404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 16058657 - 16058767
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| |||||||| |||| ||||||||| |  ||| |||    
T  16058657 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgagttagctttccagtggctttgattt 16058756  T
Q  102 gacgtgaaaat 112  Q
    |||| ||||||    
T  16058757 gacgagaaaat 16058767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 20633977 - 20634087
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| || |||| || ||||| |||||||||||| |||| ||||||| |||||||| ||||||| |||||||| |||| ||||||||| |  |||||||    
T  20633977 tgttcttgtgtcttttccacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgagttagctttccagtggctttggttt 20634076  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  20634077 gacgtgaaaat 20634087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 14792905 - 14792993
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagt 90  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| |||||||  |||||||||||| |||||||||    
T  14792905 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtacataattgtgttagctttccagt 14792993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 2332553 - 2332663
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||  ||||||| |||||||| ||||||| ||||||| ||||| ||||||| | |  |||||||    
T  2332553 tgttcttgcgtctttttcacacgtttctgttttgaattgacctttggtgtaaacatgaaagttgtagataattttgttagctttccaatggctttggttt 2332652  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  2332653 gacttgaaaat 2332663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 17902105 - 17902215
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||| | |||||||| |||||||||||| |||| ||||||| |||||||| ||||| | ||||||||||||| ||||||||| |  |||| ||    
T  17902105 tgttcttgcgtttttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttttagataattgtgttagctttccagtggctttggctt 17902204  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  17902205 gacttgaaaat 17902215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 18121313 - 18121203
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| |||||||| |||| ||||| ||| |  ||||||     
T  18121313 tgttcttgcgtctttttcacacttttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgagttagctttctagtggatttggttg 18121214  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  18121213 gacttgaaaat 18121203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 44892156 - 44892078
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgtta 80  Q
    ||||| ||||||| |||||||| |||||||||||| |||||||||||| |||||||| ||||||| ||||||| |||||    
T  44892156 tgttcttgcgtctttttcacacgtttctgttttgaattggtctttggtgtaaacatgaaagttgtagataattttgtta 44892078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 50544560 - 50544450
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||| | |||||||||||| |||| ||||||| |||||||| ||||||| ||||||||||||| |||||  || |  |||||||    
T  50544560 tgttcttgcgtctttttcacgcgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgtgttagctttcgggtggctttggttt 50544461  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  50544460 gacttgaaaat 50544450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 28313056 - 28312947
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||| | ||||||| ||||| ||||||| | |  ||||||||    
T  28313056 gttcttgcgtctttttcacacgtttctgttttgaattgggctttggtgtaaacatgaaagttttagataattttgttagctttccaatggctttggtttg 28312957  T
Q  103 acgtgaaaat 112  Q
    || |||||||    
T  28312956 acttgaaaat 28312947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 46198069 - 46198178
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| |||||||  |||||||||||| |||| ||||||| |||||||| ||||||| ||||||||||||| |||||| ||    ||||||||    
T  46198069 gttcttgcgtctttttcacatgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgtgttagctttccggtgactttggtttg 46198168  T
Q  103 acgtgaaaat 112  Q
    || |||||||    
T  46198169 acttgaaaat 46198178  T

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Target: chr1; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 29763991 - 29764087
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    |||||||| ||||| |||||| |||| ||||||| |||||||| ||||||| ||||||||||||| ||||||||| |  ||||||| || |||||||    
T  29763991 tttcacacgtttctattttgaattggcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagtggatttggtttaacatgaaaat 29764087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 20588387 - 20588277
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| || ||||||||| |||| ||||||| |||||||| ||||||| |||||||| |||| ||||||||| |  |||||||    
T  20588387 tgttcttgcgtctttttcacacgtt-ctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgagttagctttccagtggctttggttt 20588289  T
Q  102 gacgtgaaaatc 113  Q
    |  |||||||||    
T  20588288 ggtgtgaaaatc 20588277  T

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Target: chr1; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 20592925 - 20592815
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| || ||||||||| |||| ||||||| |||||||| ||||||| |||||||| |||| ||||||||| |  |||||||    
T  20592925 tgttcttgcgtctttttcacacgtt-ctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgagttagctttccagtggctttggttt 20592827  T
Q  102 gacgtgaaaatc 113  Q
    |  |||||||||    
T  20592826 ggtgtgaaaatc 20592815  T

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Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 1643302 - 1643216
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    ||||| ||||| | |||||||| |||||||||||| |||| ||||||| |||||||| ||||| | ||||||||||||| |||||||    
T  1643302 tgttcttgcgtatttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttttagataattgtgttaactttcca 1643216  T

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Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 21046392 - 21046502
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| ||   ||||||| |||||||| ||||||| |||||||| ||||  |||||||| |  |||||||    
T  21046392 tgttcttgcgtctttttcacacgtttctgttttgaattaacctttggtgtaaacatgaaagttgtagataattgagttaggtttccagtggctttggttt 21046491  T
Q  102 gacgtgaaaat 112  Q
    || ||||||||    
T  21046492 gatgtgaaaat 21046502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 21474600 - 21474710
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| || | ||||||| |||||||| ||||||| |||| |||||||| | ||||||| |  | |||||    
T  21474600 tgttcttgcgtctttttcacacgtttctgttttgaattagcctttggtgtaaacatgaaagttgtagatacttgtgttagccttccagtggcgtcggttt 21474699  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  21474700 gacttgaaaat 21474710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 45574395 - 45574481
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    ||||| ||||||| |||||||| |||||||||||| ||||  |||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  45574395 tgttcttgcgtctttttcacacgtttctgttttgaattggcatttggtgtaaacatgaaagttgtagataattttgttagctttcca 45574481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 51082925 - 51082815
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| ||| |||||||| || | ||||||| |||||||  ||||||| ||||||||| ||||||||||||| |  | |||||    
T  51082925 tgttcttgcgtctttttcacacgtttttgttttgaattagcctttggtgtaaacataaaagttgtagataattgtattatctttccagtggcgtaggttt 51082826  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  51082825 gacttgaaaat 51082815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 297063 - 296978
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| ||||||| |||||||| |||||||||||| ||||  |||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  297063 gttcttgcgtctttttcacacgtttctgttttgaattggcatttggtgtaaacatgaaagttgtagataattttgttagctttcca 296978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 50001182 - 50001097
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| ||||||| || ||||| |||||||||||| || | ||||||| |||||||| ||||||| ||||||||||||| |||||||    
T  50001182 gttcttgcgtcttttgcacacgtttctgttttgaattagcctttggtgtaaacatgaaagttgtagataattgtgttagctttcca 50001097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 129
Target Start/End: Original strand, 10812943 - 10813031
Alignment:
Q  41 gtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaatcttttgtgtataattta 129  Q
    |||||||||||||||||| ||| ||||||||||| || |||||||| |||||  |||||||| | ||||||||| |||||  |||||||    
T  10812943 gtctttggtataaacatgaaagatgttgataattatgatatctttcaagtagctttggtttggcatgaaaatctgttgtggttaattta 10813031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 14237969 - 14238065
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    |||||||| |||||||||||| || | ||||||| ||||||||||| |||| ||||||||||||| |||| |||| |  | |||||||| |||||||    
T  14237969 tttcacacgtttctgttttgaattagcctttggtgtaaacatgtaaattgtagataattgtgttagcttttcagtggcgtcggtttgacttgaaaat 14238065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 22130416 - 22130494
Alignment:
Q  10 cgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    ||||| |||||||| |||||||||||| |||| ||||| | |||||||| ||||||| ||||||| ||||| |||||||    
T  22130416 cgtctttttcacacgtttctgttttgaattggcctttgatgtaaacatgaaagttgtagataattttgttagctttcca 22130494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 20437588 - 20437656
Alignment:
Q  20 acacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  20437588 acacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattttgttagctttcca 20437656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 22823764 - 22823852
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgac 104  Q
    ||||||||||||||||||||| || |  || ||| |||||||| ||||| | ||||||||||||| ||||||||| |  ||||||||||    
T  22823764 tttcacacatttctgttttgaatttgctttcggtgtaaacatgaaagttttagataattgtgttagctttccagtggctttggtttgac 22823852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 45496655 - 45496571
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttc 86  Q
    ||||| ||||| | |||||||| |||||||||||| |||| ||||||| |||||||| || || | ||||||||||||| |||||    
T  45496655 tgttcttgcgtgtttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaaattttagataattgtgttagctttc 45496571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 9784687 - 9784796
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| |||  || ||||||||||||| ||||  || ||| |||||||| ||||| | ||||||| ||||| ||||||| | || ||||||||    
T  9784687 gttcttgcgtcttttttgcatatttctgttttgaattggctttcggtgtaaacatgaaagttttagataattttgttagctttccaatggttttggtttg 9784786  T
Q  103 acgtgaaaat 112  Q
    || |||||||    
T  9784787 acttgaaaat 9784796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 29535699 - 29535614
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| ||||||| |||||||| |||||||||||| || | ||||||| |||||||| || || | ||||||| ||||| |||||||    
T  29535699 gttcttgcgtctttttcacacgtttctgttttgaattagcctttggtgtaaacatgaaaattttagataattttgttagctttcca 29535614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 41227051 - 41227157
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| ||| |||||||| |||| ||||||||    |||  ||||||| |||||||| |||| ||||||||| |  |||||||    
T  41227051 tgttcttgcgtctttttcacacgtttatgttttgaattggcctttggta----cataaaagttgtagataattgagttagctttccagtggctttggttt 41227146  T
Q  102 gacgtgaaaat 112  Q
    |||| ||||||    
T  41227147 gacgcgaaaat 41227157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 16372446 - 16372374
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||||||| |||||||||||| |||| ||| ||| |||||||| ||||| | ||||||| ||||| |||||||    
T  16372446 tttcacacgtttctgttttgaattggacttgggtgtaaacatggaagttttagataattttgttagctttcca 16372374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 18060542 - 18060625
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttc 86  Q
    |||| ||||||| ||||||  ||||||||||||| |||| ||||||| |||||||| ||||| | | ||||| ||||| |||||    
T  18060542 gttcttgcgtctttttcacctatttctgttttgatttggcctttggtgtaaacatgaaagttttaggtaattatgttagctttc 18060625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 39060763 - 39060694
Alignment:
Q  44 tttggtataaacatgtaagttgttgataattgtgttatctttcc-agtagtcttggtttgacgtgaaaat 112  Q
    ||||||||||||||| ||||| | ||||||||||||| |||||| ||| |  |||||||||| |||||||    
T  39060763 tttggtataaacatgaaagttttagataattgtgttagctttccaagtggctttggtttgacttgaaaat 39060694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 34392303 - 34392263
Alignment:
Q  88 agtagtcttggtttgacgtgaaaatcttttgtgtataattt 128  Q
    ||||| ||||||||||| ||||||||||||||| |||||||    
T  34392303 agtagccttggtttgacatgaaaatcttttgtggataattt 34392263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 51323942 - 51323874
Alignment:
Q  44 tttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    |||||| |||| ||| ||||||| |||||||||||||  |||||||| |  |||||||||| |||||||    
T  51323942 tttggtgtaaatatgaaagttgtagataattgtgttagatttccagtggctttggtttgacttgaaaat 51323874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 117; Significance: 1e-59; HSPs: 65)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 25 - 233
Target Start/End: Complemental strand, 21404006 - 21403801
Alignment:
Q  25 tttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaatcttttgtgtata 124  Q
    |||||| ||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||    
T  21404006 tttctgatttgaattggtctttggtgtaaacatgaaagttgttgataattgtgttatctttccaatagtcttgctttgacgtgaaaatcttttgtggata 21403907  T
Q  125 atttaacannnnnnnnnatgaagatgtatgaatgaattattgttgttaaatatgatgtctatatgatgttattcatggttgatgaatagtgagattatgt 224  Q
    ||||||||         | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| ||||||||||      
T  21403906 atttaaca--tgtttttacgaagatgtatgaatgaattattgttgttaaatatgatgtttatatgatgttattcat-gttaatgaattgtgagattatca 21403810  T
Q  225 tgcgaagtt 233  Q
    |||||||||    
T  21403809 tgcgaagtt 21403801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 20312662 - 20312551
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| |||||||| ||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  20312662 gttcgtgcgtctgtttcacacgtttctgttttgagttggtcttcggtgtaaacatgaaagttgttgataattgtgttatctttccagtggtcttagtttg 20312563  T
Q  103 acgtgaaaatct 114  Q
    | ||||| ||||    
T  20312562 atgtgaatatct 20312551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 8833550 - 8833660
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||||||||| ||||||||| |  |||||||    
T  8833550 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagtggctttggttt 8833649  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  8833650 gacttgaaaat 8833660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 1627725 - 1627834
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| ||||||||||||||||||||| |||| ||||||| | |||||| ||||| | ||||||||||||||||||| ||| |  ||||||||    
T  1627725 gttcttgcgtctttttcacacatttctgttttgaattggcctttggtgtgaacatgaaagttttagataattgtgttatctttctagtggctttggtttg 1627824  T
Q  103 acgtgaaaat 112  Q
    || |||||||    
T  1627825 acttgaaaat 1627834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 16604947 - 16605057
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||| | ||||||||||||| ||||| ||| |  |||||||    
T  16604947 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttttagataattgtgttagctttctagtggctttggttt 16605046  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  16605047 gacttgaaaat 16605057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 17011435 - 17011325
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| ||||  ||| || |||||||| ||||||| ||||||||||||| ||||||||| |  |||||||    
T  17011435 tgttcttgcgtctttttcacacgtttctgttttgaattggcattttgtgtaaacatgaaagttgtagataattgtgttagctttccagtggctttggttt 17011336  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  17011335 gacttgaaaat 17011325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 21554722 - 21554832
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||  ||||||| |||||||| ||||| | ||||||||||||| ||||| ||| || |||||||    
T  21554722 tgttcttgcgtctttttcacacgtttctgttttgaattgacctttggtgtaaacatgaaagttttagataattgtgttagctttctagtggtattggttt 21554821  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  21554822 gacttgaaaat 21554832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 43243001 - 43243111
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| ||||||||||||||||||||| |||| ||||||| | |||||| ||||||| ||||||| ||||| ||||||| |  | |||||||    
T  43243001 tgttcttgcgtctttttcacacatttctgttttgaattggcctttggtgtgaacatgaaagttgtagataattttgttagctttccaatgattttggttt 43243100  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  43243101 gacttgaaaat 43243111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 29448546 - 29448437
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||||||||| |||||| || |  || |||||    
T  29448546 gttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgtgttagctttccggtggctttagtttg 29448447  T
Q  103 acgtgaaaat 112  Q
    || |||||||    
T  29448446 acttgaaaat 29448437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 22758233 - 22758319
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    ||||| ||||||| ||||||||||||||||||||| |||| ||||||| | |||||| ||||||| ||||||| ||||| |||||||    
T  22758233 tgttcttgcgtctttttcacacatttctgttttgaattggcctttggtgtgaacatgaaagttgtagataattttgttagctttcca 22758319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 39245784 - 39245674
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||  |||||||||||| || | ||||||| |||||||| ||||||| ||||||||||||| ||||||||| |  | |||||    
T  39245784 tgttcttgcgtctttttcacatgtttctgttttgaattagcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagtggcgtcggttt 39245685  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  39245684 gacttgaaaat 39245674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 264282 - 264370
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagt 90  Q
    ||||| ||||||| |||||||| |||||||||||| || | ||||||| |||||||| ||||||| ||||||||||||| |||| ||||    
T  264282 tgttcttgcgtctttttcacacgtttctgttttgaattagcctttggtgtaaacatgaaagttgtagataattgtgttagctttacagt 264370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 112
Target Start/End: Complemental strand, 19921336 - 19921233
Alignment:
Q  8 tgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtg 107  Q
    ||||||| ||| |||  |||||||||||| |||| ||||||| |||||||| ||||||| ||| |||| |||| ||||||||| || |||||||||||||    
T  19921336 tgcgtcttttttacatgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagatgattgagttagctttccagtggt-ttggtttgacgtg 19921238  T
Q  108 aaaat 112  Q
    |||||    
T  19921237 aaaat 19921233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 21557401 - 21557497
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    |||||||| |||||||||||| |||  ||||||| |||||||| ||||| | ||||||||||||| ||||| ||| || |||||||||| |||||||    
T  21557401 tttcacacgtttctgttttgaattgacctttggtgtaaacatgaaagttttagataattgtgttagctttctagtggtattggtttgacttgaaaat 21557497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 26762110 - 26762022
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagt 90  Q
    ||||| ||||||| |||||||| |||||||||||| |||| |||| || |||||||| ||||||| ||||| ||||||| |||||||||    
T  26762110 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttagtgtaaacatgaaagttgtagataaatgtgttagctttccagt 26762022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 39364032 - 39363944
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagt 90  Q
    ||||| ||||||| |||||||| |||||||||||| || | |||| || |||||||| ||||||| ||||||||||||| |||||||||    
T  39364032 tgttcttgcgtctttttcacacgtttctgttttgaattagcctttagtgtaaacatgaaagttgtagataattgtgttagctttccagt 39363944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 6766371 - 6766284
Alignment:
Q  1 gtgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||||| ||||||| || ||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  6766371 gtgttcttgcgtcttttacacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattttgttagctttcca 6766284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 24276948 - 24277035
Alignment:
Q  1 gtgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||||| ||||||| |||||||| |||||||||||| |||  ||||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  24276948 gtgttcttgcgtctttttcacacgtttctgttttgaattgacctttggtgtaaacatgaaagttgtagataattttgttagctttcca 24277035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 24385265 - 24385178
Alignment:
Q  1 gtgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||||| ||||||| |||||||| |||||||||||| |||  ||||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  24385265 gtgttcttgcgtctttttcacacgtttctgttttgaattgacctttggtgtaaacatgaaagttgtagataattttgttagctttcca 24385178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 8504212 - 8504322
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||  |||||||||||| |||| ||||||| |||| ||| ||||||| ||||||| ||||| |||||| || |  |||||||    
T  8504212 tgttcttgcgtctttttcacatgtttctgttttgaattggcctttggtgtaaaaatgaaagttgtagataattatgttagctttcctgtggctttggttt 8504311  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  8504312 gacttgaaaat 8504322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 14026151 - 14026261
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| || |||| |||||||  |||||||||||| |||| ||||||| |||||||| ||||| | ||||||| |||||| |||||||| |  |||||||    
T  14026151 tgttcttgtgtctttttcacatgtttctgttttgaattggcctttggtgtaaacatgaaagttttagataattatgttatatttccagtggctttggttt 14026250  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  14026251 gacttgaaaat 14026261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 18419121 - 18419011
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||| ||| |||||||| |||||||||||| |||  ||||||| |||||||| ||||||| ||||||| ||||| ||||||| | |  |||||||    
T  18419121 tgttcttgcatctttttcacacgtttctgttttgaattgacctttggtgtaaacatgaaagttgtagataattttgttagctttccaatggctttggttt 18419022  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  18419021 gacttgaaaat 18419011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 18744358 - 18744248
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| ||||  |||| | |||||||| ||||| | |||||||| |||| ||||||||| |  |||||||    
T  18744358 tgttcttgcgtctttttcacacgtttctgttttgaattggcatttgatgtaaacatgaaagttatagataattgagttagctttccagtggctttggttt 18744259  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  18744258 gacttgaaaat 18744248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 20909660 - 20909550
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| || |  |||||| |||||||| ||||||| ||||||||||||| |||| |||| |  | |||||    
T  20909660 tgttcttgcgtctttttcacacgtttctgttttgaattagcttttggtgtaaacatgaaagttgtagataattgtgttagctttacagtggcgtcggttt 20909561  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  20909560 gacttgaaaat 20909550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 23065162 - 23065052
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| ||| | |||||| || | ||||||| |||||||| ||||||| ||||||||||||| ||||||||| |  | |||||    
T  23065162 tgttcttgcgtctttttcacacgtttatcttttgaattagcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagtggcgtcggttt 23065063  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  23065062 gacttgaaaat 23065052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 29351574 - 29351464
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| || ||||| |||||||||||| || | ||||||| |||||||| ||||||| ||||||||||||| |||| |||| |  | |||||    
T  29351574 tgttcttgcgtcttttccacacgtttctgttttgaattagcctttggtgtaaacatgaaagttgtagataattgtgttagctttacagtggcgtcggttt 29351475  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  29351474 gacttgaaaat 29351464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 36460671 - 36460593
Alignment:
Q  10 cgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    ||||| |||||||| ||||||||||||||||  ||||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  36460671 cgtctttttcacacgtttctgttttgagttgacctttggtgtaaacatgaaagttgtagataattttgttagctttcca 36460593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 19511887 - 19511810
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  19511887 gtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattttgttagctttcca 19511810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 37804417 - 37804502
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| ||||||| |||||||  |||||||||||| |||||||||||| |||||||| ||||||| ||||||  ||||| |||||||    
T  37804417 gttcttgcgtctttttcacatttttctgttttgaattggtctttggtgtaaacatgaaagttgtagataatgttgttagctttcca 37804502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 38145090 - 38145167
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  38145090 gtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattttgttagctttcca 38145167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 41875937 - 41876014
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgtta 80  Q
    |||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||| |||||    
T  41875937 gttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattttgtta 41876014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 42961077 - 42961000
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  42961077 gtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattttgttagctttcca 42961000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 9776806 - 9776730
Alignment:
Q  10 cgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttc 86  Q
    ||||| |||||||  |||||||||||| |||||||||||| |||||||| ||||||| ||||||| ||||| |||||    
T  9776806 cgtctttttcacatgtttctgttttgaattggtctttggtgtaaacatgaaagttgtagataattatgttagctttc 9776730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 86
Target Start/End: Complemental strand, 12037 - 11962
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttc 86  Q
    |||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||| ||||| |||||    
T  12037 gtctttttcacacgtttctgttttgaattggactttggtgtaaacatgaaagttgtagataattttgttagctttc 11962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 263552 - 263481
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcc 87  Q
    |||||||| ||| |||||||| |||||||||||| |||||||| ||||| | ||||||||||||| ||||||    
T  263552 tttcacacgtttttgttttgaattggtctttggtgtaaacatgaaagttatagataattgtgttagctttcc 263481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 106
Target Start/End: Complemental strand, 19499562 - 19499467
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgt 106  Q
    |||| ||||||| ||||||||||||| || | ||||||| |||||||| ||||||| ||||||| ||||| ||||| | |||  ||||||||||||    
T  19499562 gtctttttcacatatttctgttttgaattagactttggtgtaaacatgaaagttgtagataattttgttagctttctaatagctttggtttgacgt 19499467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 22367070 - 22367145
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttc 86  Q
    |||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||| ||||| |||||    
T  22367070 gtctttttcacacgtttctgttttgaattggactttggtgtaaacatgaaagttgtagataattttgttagctttc 22367145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 86
Target Start/End: Complemental strand, 25426311 - 25426236
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttc 86  Q
    |||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||| ||||| |||||    
T  25426311 gtctttttcacacgtttctgttttgaattggactttggtgtaaacatgaaagttgtagataattttgttagctttc 25426236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 32607668 - 32607778
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtc-ttggtt 100  Q
    ||||| ||||||| |||||||  |||||||||||| |||| ||||||| |||||||| ||||| | ||||||| ||||| ||||||| | ||| ||||||    
T  32607668 tgttcttgcgtctttttcacatgtttctgttttgaattggcctttggtgtaaacatgaaagttttagataattttgttagctttccaat-gtctttggtt 32607766  T
Q  101 tgacgtgaaaat 112  Q
    |||| |||||||    
T  32607767 tgacttgaaaat 32607778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 20566263 - 20566153
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| || |||| ||||| || |||||||||||| |||  ||||||| |||||||| ||||||| |||||||| ||||  ||| |||| |  |||||||    
T  20566263 tgttcttgtgtctttttcatacgtttctgttttgaattgtcctttggtgtaaacatgaaagttgtagataattgagttaaattttcagtggctttggttt 20566164  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  20566163 gacgtgaaaat 20566153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 235
Target Start/End: Complemental strand, 21420069 - 21419989
Alignment:
Q  151 tatgaatgaattattgttgttaaatatgatgtctatatgatgttattcatggttgatgaatagtgagattatgttgcgaagttga 235  Q
    |||||||||||||||||||||||||||||||| |||   ||||||||||| ||| | |||| ||||||||||| ||||| |||||    
T  21420069 tatgaatgaattattgttgttaaatatgatgtttat---atgttattcat-gttaacgaattgtgagattatgatgcgacgttga 21419989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 23199735 - 23199845
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||| ||| |||||||  |||||||||||| |||| |||| ||||| ||||| ||||||| ||||||||||||| ||||||  | |  |||||||    
T  23199735 tgttcttgcatctttttcacatgtttctgttttgaattggccttttgtatacacatgaaagttgtagataattgtgttagctttcccatggctttggttt 23199834  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  23199835 gacttgaaaat 23199845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 24617266 - 24617376
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||  |||||| |||||  |||  |||||| |||||||| ||||||| ||||||| ||||| ||||||| | |  |||||||    
T  24617266 tgttcttgcgtctttttcacatgtttctgctttgaactgggttttggtgtaaacatgaaagttgtagataattttgttagctttccaatggctttggttt 24617365  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  24617366 gacgtgaaaat 24617376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 24713497 - 24713607
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||  |||||| |||||  |||  |||||| |||||||| ||||||| ||||||| ||||| ||||||| | |  |||||||    
T  24713497 tgttcttgcgtctttttcacatgtttctgctttgaactgggttttggtgtaaacatgaaagttgtagataattttgttagctttccaatggctttggttt 24713596  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  24713597 gacgtgaaaat 24713607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 24746525 - 24746635
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||  |||||| |||||  |||  |||||| |||||||| ||||||| ||||||| ||||| ||||||| | |  |||||||    
T  24746525 tgttcttgcgtctttttcacatgtttctgctttgaactgggttttggtgtaaacatgaaagttgtagataattttgttagctttccaatggctttggttt 24746624  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  24746625 gacgtgaaaat 24746635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 29346628 - 29346518
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| || ||||| |||||||||||| || | ||||||| |||||||| ||||||| |||||||| |||| |||| |||| |  | |||||    
T  29346628 tgttcttgcgtcttttccacacgtttctgttttgaattagcctttggtgtaaacatgaaagttgtagataattgcgttagctttacagtggcgtcggttt 29346529  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  29346528 gacttgaaaat 29346518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 29349101 - 29348991
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| || ||||| |||||||||||| || | ||||||| |||||||| ||||||| |||||||| |||| |||| |||| |  | |||||    
T  29349101 tgttcttgcgtcttttccacacgtttctgttttgaattagcctttggtgtaaacatgaaagttgtagataattgcgttagctttacagtggcgtcggttt 29349002  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  29349001 gacttgaaaat 29348991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 38620084 - 38620006
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgtta 80  Q
    ||||| ||||||| |||||||| |||||||||||| || | ||||||| || ||||| ||||||| |||||||||||||    
T  38620084 tgttcttgcgtctttttcacacgtttctgttttgaattagcctttggtgtatacatgaaagttgtagataattgtgtta 38620006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 17909175 - 17909066
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| ||||||  ||||||||||||| |||  ||||||| |||||||| ||||| | ||||||| ||||| ||||||| | |  ||||||||    
T  17909175 gttcttgcgtctttttcacctatttctgttttgaattgacctttggtgtaaacatgaaagttttagataattatgttagctttccaatggctttggtttg 17909076  T
Q  103 acgtgaaaat 112  Q
    || |||||||    
T  17909075 acttgaaaat 17909066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 18778581 - 18778650
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgtta 80  Q
    |||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||| |||||    
T  18778581 gtctttttcacacgtttctgttttgaattggactttggtgtaaacatgaaagttgtagataattttgtta 18778650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 33472908 - 33472993
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| ||||||| |||||||| |||||||||||| |||| ||||||| |||| ||  ||||||| ||||||| ||||| |||||||    
T  33472908 gttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaaaattaaagttgtagataattttgttagctttcca 33472993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 86
Target Start/End: Complemental strand, 22750641 - 22750566
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttc 86  Q
    |||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||| | ||||||| ||||| |||||    
T  22750641 gtctttttcacacgtttctgttttgaattggactttggtgtaaacatgaaagttttagataattttgttagctttc 22750566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 112
Target Start/End: Complemental strand, 31456484 - 31456397
Alignment:
Q  25 tttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    |||||||||||| || || || ||| |||||||| ||||||| |||||||| |||| ||||||||| |  |||||||||| |||||||    
T  31456484 tttctgttttgaatttgttttcggtgtaaacatgaaagttgtagataattgagttaactttccagtggctttggtttgacttgaaaat 31456397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 16063191 - 16063084
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| |||||||||||| | |||  | |||  ||||||| |||||||| ||||||| ||||||||||||| |||| |||| |  ||||||||    
T  16063191 gttcttgcgtctttttcacacattttttttt--atttgacctttggtgtaaacatgaaagttgtagataattgtgttagctttacagtggatttggtttg 16063094  T
Q  103 acgtgaaaat 112  Q
    || |||||||    
T  16063093 acttgaaaat 16063084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 26749740 - 26749678
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagtt 64  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| |||||    
T  26749740 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagtt 26749678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 22337020 - 22336943
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| |||||||| |||||||||||| |||| ||| ||| |||||||| ||||| | ||||||| ||||| |||||||    
T  22337020 gtctttttcacacgtttctgttttgaattggacttgggtgtaaacatggaagttttagataattttgttagctttcca 22336943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 22340558 - 22340481
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| |||||||| |||||||||||| |||| ||| ||| |||||||| ||||| | ||||||| ||||| |||||||    
T  22340558 gtctttttcacacgtttctgttttgaattggacttgggtgtaaacatggaagttttagataattttgttagctttcca 22340481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 27868919 - 27869004
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| ||||||| |||||||  |||||||||||| ||||  |||||| | |||||| ||||||| ||||||| ||||| |||||||    
T  27868919 gttcttgcgtctttttcacatgtttctgttttgaattggcatttggtgtgaacatgaaagttgtagataattctgttagctttcca 27869004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 36509127 - 36509236
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||  |||  |||| | |||| || ||||| ||||||||| |  |||||||    
T  36509127 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaactatgagagttttagatatttatgttagctttccagtggctttggttt 36509226  T
Q  102 gacgtgaaaa 111  Q
    ||| ||||||    
T  36509227 gacttgaaaa 36509236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 7425019 - 7424948
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataatt 74  Q
    |||| ||| ||| ||||||  ||||||||||||| |||| ||||||| |||||||| ||||||| |||||||    
T  7425019 gttcttgcatctttttcacctatttctgttttgaattggactttggtgtaaacatgaaagttgtagataatt 7424948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 21074184 - 21074259
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttc 86  Q
    |||| |||||||| |||||||||||| |||| ||||||| |||| ||| ||||| | ||||||| ||||| |||||    
T  21074184 gtctttttcacacgtttctgttttgaattggactttggtgtaaaaatgaaagttttagataattttgttagctttc 21074259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 43443984 - 43444059
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttc 86  Q
    |||| ||||| || |||||||||||| |||| ||||||| |||||||| ||||||| ||||| | ||||| |||||    
T  43443984 gtctttttcatacgtttctgttttgaattggactttggtgtaaacatgaaagttgtagataactttgttagctttc 43444059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 130
Target Start/End: Original strand, 26765674 - 26765728
Alignment:
Q  76 tgttatctttccagtagtcttggtttgacgtgaaaatcttttgtgtataatttaa 130  Q
    ||||||||||||||||  |||| ||||||||||||||||| |||| |||| ||||    
T  26765674 tgttatctttccagtacccttgttttgacgtgaaaatcttgtgtggataacttaa 26765728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 86
Target Start/End: Original strand, 35791713 - 35791775
Alignment:
Q  24 atttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttc 86  Q
    ||||||||||||| || | ||||||| |||||||| ||||||| ||||||| ||||| |||||    
T  35791713 atttctgttttgattttgactttggtgtaaacatgaaagttgtagataattttgttagctttc 35791775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 23506637 - 23506568
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgtta 80  Q
    |||| ||||||||||||||||||||| || | ||| ||| |||||||| ||||| | ||||||| |||||    
T  23506637 gtctttttcacacatttctgttttgaatttgccttcggtgtaaacatgaaagttttagataattatgtta 23506568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 111; Significance: 4e-56; HSPs: 73)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 3 - 235
Target Start/End: Complemental strand, 18452361 - 18452132
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| ||||||||||||||||||||| |||  ||||||| |||||||| |||||| |  |||||||||||||||||||||||||||||||||    
T  18452361 gttcttgcgtctttttcacacatttctgttttgatttgacctttggtgtaaacatgaaagttgctattaattgtgttatctttccagtagtcttggtttg 18452262  T
Q  103 acgtgaaaatcttttgtgtataatttaacannnnnnnnnatgaagatgtatgaatgaattattgttgttaaatatgatgtctatatgatgttattcatgg 202  Q
    || ||||||| ||||||| || ||||||||         |  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |    
T  18452261 acatgaaaatattttgtggatgatttaacatgtttttaca--aagatgtatgaatgaattattgttgttaaatatgatgtttatatgatgttattcat-g 18452165  T
Q  203 ttgatgaatagtgagattatgttgcgaagttga 235  Q
    || |||||| ||||||||||| || ||||||||    
T  18452164 ttaatgaattgtgagattatgatgagaagttga 18452132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 30674057 - 30674171
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaatctt 115  Q
    ||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  30674057 tttcacacatttctgttttgaattggtctttgctataaacatggaagttgttgataattgtgttatctttccagtagccttggtttgacatgaaaatctt 30674156  T
Q  116 ttgtgtataatttaa 130  Q
    ||||| |||||||||    
T  30674157 ttgtggataatttaa 30674171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 3 - 128
Target Start/End: Complemental strand, 10445606 - 10445481
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| |||||||||||||||| ||| |||||| |||||| ||||||| |||| ||| ||||| |||||||||||||||||||||||||||  ||||||||    
T  10445606 gttcttgcgtctatttcacacgtttatgttttaagttggcctttggtgtaaatatgaaagttattgataattgtgttatctttccagtagctttggtttg 10445507  T
Q  103 acgtgaaaatcttttgtgtataattt 128  Q
    || ||||||||||||||| |||||||    
T  10445506 acatgaaaatcttttgtggataattt 10445481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 19655572 - 19655682
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| ||| |||| |||||||||||| |||| ||||||| |||||||| ||||||| |||||||| |||| ||||||||| || |||||||    
T  19655572 tgttcttgcgtctttttaacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgagttagctttccagtggttttggttt 19655671  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  19655672 gacgtgaaaat 19655682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 130
Target Start/End: Complemental strand, 1818334 - 1818213
Alignment:
Q  9 gcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtga 108  Q
    |||||| | |||||| ||||| |||||||||||  ||| || |||| ||| || || ||||||||||||||||||||| ||||| |||||||||||||||    
T  1818334 gcgtctgtctcacacgtttctattttgagttggcatttagtgtaaatatgaaacttattgataattgtgttatctttctagtagccttggtttgacgtga 1818235  T
Q  109 aaatcttttgtgtataatttaa 130  Q
    ||| |||||||| |||||||||    
T  1818234 aaaccttttgtggataatttaa 1818213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 23415612 - 23415503
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||||||||| ||||||||| |  ||||||||    
T  23415612 gttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagtggctttggtttg 23415513  T
Q  103 acgtgaaaat 112  Q
    || |||||||    
T  23415512 acatgaaaat 23415503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 15891054 - 15891164
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||| ||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| |||||||| |||| ||||||||| |  |||||||    
T  15891054 tgttcttgcatctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgagttagctttccagtggctttggttt 15891153  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  15891154 gacgtgaaaat 15891164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 31734415 - 31734305
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| |||||||||||||||| |||||||||||| ||||  |||||| |||||||| ||||||| |||||||| ||||  |||||||| |  |||||||    
T  31734415 tgttcttgcgtctatttcacacgtttctgttttgaattggcatttggtgtaaacatgaaagttgtagataattgagttagttttccagtggctttggttt 31734316  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  31734315 gacgtgaaaat 31734305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 32259555 - 32259445
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||  |||||||||||| |||| ||||||| |||||||| ||||||| |||||||||||||  |||||||| |  |||||||    
T  32259555 tgttcttgcgtctttttcacatgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgtgttagttttccagtggctttggttt 32259456  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  32259455 gacgtgaaaat 32259445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 17318480 - 17318575
Alignment:
Q  17 ttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    ||||||| |||||||||||| |||| ||||||| |||||||| ||||||| |||||||| |||| ||||||||| |  ||||||||||||||||||    
T  17318480 ttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgagttagctttccagtggctttggtttgacgtgaaaat 17318575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 7827681 - 7827571
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||| ||| |||||||| |||||||||||| |||  |||||||||||||||| ||||||| |||||||| |||| ||||| ||| |  |||||||    
T  7827681 tgttcttgcatctttttcacacgtttctgttttgaattgacctttggtataaacatgaaagttgtagataattgagttagctttctagtggctttggttt 7827582  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  7827581 gacgtgaaaat 7827571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 8055678 - 8055568
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| || | ||||||| |||||||| ||||||| ||||||||||||| ||||||||| |  | |||||    
T  8055678 tgttcttgcgtctttttcacacgtttctgttttgaattagcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagtggcgtcggttt 8055579  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  8055578 gacttgaaaat 8055568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 15704954 - 15705064
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||| ||| |||||||| |||||| ||||| |||| ||||||| |||||||| || |||| |||||||| |||| ||||||||| || |||||||    
T  15704954 tgttcttgcatctttttcacacgtttctggtttgaattggcctttggtgtaaacatgaaaattgtagataattgagttagctttccagtggttttggttt 15705053  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  15705054 gacgtgaaaat 15705064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 18334106 - 18334216
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| || | ||||||| |||||||| ||||||| ||||||||||||| ||||||||| |  | |||||    
T  18334106 tgttcttgcgtctttttcacacgtttctgttttgaattagcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagtggcgtcggttt 18334205  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  18334206 gacttgaaaat 18334216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 20411015 - 20411125
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||||||||||| |||||||  ||||||| || |||||||||| | ||||||| |  |||||||    
T  20411015 tgttcttgcgtctttttcacacgtttctgttttgaattggtctttggtgtaaacattaaagttgtagacaattgtgttagcattccagtggctttggttt 20411114  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  20411115 gacttgaaaat 20411125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 24423195 - 24423085
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| || | ||||||| |||||||| ||||||| ||||||||||||| ||||||||| |  | |||||    
T  24423195 tgttcttgcgtctttttcacacgtttctgttttgaattagcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagtggcgtcggttt 24423096  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  24423095 gacttgaaaat 24423085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 27125819 - 27125929
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| |||||||| |||| ||||||||| |  || ||||    
T  27125819 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgagttagctttccagtggcttttgttt 27125918  T
Q  102 gacgtgaaaat 112  Q
    || ||||||||    
T  27125919 gaggtgaaaat 27125929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 27330315 - 27330425
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| || |||| ||||||||||||||||||||| |||| ||||||| |||||||| ||||||| |||||||| ||||  |||||||| |  |||||||    
T  27330315 tgttcttgtgtctttttcacacatttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgagttagttttccagtggctttggttt 27330414  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  27330415 gacatgaaaat 27330425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 27391055 - 27391165
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| || |||| ||||||||||||||||||||| |||| ||||||| |||||||| ||||||| |||||||| ||||  |||||||| |  |||||||    
T  27391055 tgttcttgtgtctttttcacacatttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgagttagttttccagtggctttggttt 27391154  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  27391155 gacatgaaaat 27391165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 15173799 - 15173908
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||| | |||||||| |||||||||||| |||| ||||||| ||| |||| ||||||| ||||||||||||| ||||||||| |  ||||||||    
T  15173799 gttcttgcgtgtttttcacacgtttctgttttgaattggcctttggtgtaagcatgaaagttgtagataattgtgttagctttccagtggatttggtttg 15173898  T
Q  103 acgtgaaaat 112  Q
    || |||||||    
T  15173899 acttgaaaat 15173908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 27557370 - 27557261
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||||||||| |||||| || |  || |||||    
T  27557370 gttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgtgttagctttccggtggatttagtttg 27557271  T
Q  103 acgtgaaaat 112  Q
    || |||||||    
T  27557270 acatgaaaat 27557261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 1254460 - 1254380
Alignment:
Q  8 tgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    ||||||| |||||||||||||||||||||||||  ||||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  1254460 tgcgtctttttcacacatttctgttttgagttgacctttggtgtaaacatgaaagttgtagataattttgttagctttcca 1254380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 112
Target Start/End: Complemental strand, 25921420 - 25921328
Alignment:
Q  20 acacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    |||| |||||||||||| |||| ||||||| |||||||| ||||| | ||||||||||||||||||||||| |  |||||||||| |||||||    
T  25921420 acacgtttctgttttgaattgggctttggtgtaaacatgaaagttttagataattgtgttatctttccagtggctttggtttgacttgaaaat 25921328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 2290694 - 2290804
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| || | ||||||| |||||||| ||||||| ||||||||||||| |||| |||| |  | |||||    
T  2290694 tgttcttgcgtctttttcacacgtttctgttttgaattagcctttggtgtaaacatgaaagttgtagataattgtgttagcttttcagtggcatcggttt 2290793  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  2290794 gacttgaaaat 2290804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 7430232 - 7430122
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||  ||||||| |||||||| ||||||| ||||||| ||||| ||||||| | |  |||||||    
T  7430232 tgttcttgcgtctttttcacacgtttctgttttgacttgacctttggtgtaaacatgaaagttgtagataattttgttagctttccaatggctttggttt 7430133  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  7430132 gacttgaaaat 7430122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 19773052 - 19773162
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||| | |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| |||||||| ||||  |||||||| || || ||||    
T  19773052 tgttcttgcgtatttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgagttagttttccagtggtttttgttt 19773151  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  19773152 gacatgaaaat 19773162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 23150610 - 23150720
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| ||| |||| ||||||||||||||||  ||||||| |||||||| ||||||| |||||||| |||| |||| || | |  |||||||    
T  23150610 tgttcttgcgtctttttaacacgtttctgttttgagttgacctttggtgtaaacatgaaagttgtagataattgagttagcttttcaatggctttggttt 23150709  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  23150710 gacgtgaaaat 23150720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 25601620 - 25601730
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||  ||||| |||||| |||| ||||||| |||||||| ||||| | ||||||||||||| ||||||||| |  |||||||    
T  25601620 tgttcttgcgtctttttcacatgtttcttttttgaattggcctttggtgtaaacatgaaagttttagataattgtgttagctttccagtggctttggttt 25601719  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  25601720 gacttgaaaat 25601730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 33864926 - 33864816
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| || | ||||||| |||||||| ||||||| ||||||||||||| |||| |||| |  | |||||    
T  33864926 tgttcttgcgtctttttcacacgtttctgttttgaattagcctttggtgtaaacatgaaagttgtagataattgtgttagctttacagtggcgtcggttt 33864827  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  33864826 gacttgaaaat 33864816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 12942837 - 12942752
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| ||||||| |||||||  |||||||||||| |||||||||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  12942837 gttcttgcgtctttttcacatgtttctgttttgaattggtctttggtgtaaacatgaaagttgtagataattttgttagctttcca 12942752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 23956570 - 23956485
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  23956570 gttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattttgttagctttcca 23956485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 25807840 - 25807755
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  25807840 gttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattttgttagctttcca 25807755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 112
Target Start/End: Complemental strand, 18703267 - 18703163
Alignment:
Q  8 tgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtg 107  Q
    ||||||| |||||||| |||||||||||| |||| ||||||| |||||||  ||||||| ||| |||| |||| ||||||| | |  |||||||||||||    
T  18703267 tgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacattaaagttgtagattattgagttagctttccaatggctttggtttgacgtg 18703168  T
Q  108 aaaat 112  Q
    |||||    
T  18703167 aaaat 18703163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 112
Target Start/End: Complemental strand, 18709202 - 18709098
Alignment:
Q  8 tgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtg 107  Q
    ||||||| |||||||| |||||||||||| |||| ||||||| |||||||  ||||||| ||| |||| |||| ||||||| | |  |||||||||||||    
T  18709202 tgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatcaaagttgtagatcattgagttagctttccaatggctttggtttgacgtg 18709103  T
Q  108 aaaat 112  Q
    |||||    
T  18709102 aaaat 18709098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 112
Target Start/End: Complemental strand, 23656042 - 23655938
Alignment:
Q  8 tgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtg 107  Q
    ||||||| |||||||| |||||||||||| |||| |||| || |||||||| ||||| | ||||||||||||| ||||||||| |  |||||||| | ||    
T  23656042 tgcgtctttttcacacgtttctgttttgaattggccttttgtgtaaacatgaaagttttagataattgtgttagctttccagtggctttggtttgccttg 23655943  T
Q  108 aaaat 112  Q
    |||||    
T  23655942 aaaat 23655938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 19825831 - 19825918
Alignment:
Q  1 gtgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||| | ||||||| ||||| |||||||    
T  19825831 gtgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttttagataattttgttagctttcca 19825918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 35057213 - 35057098
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||| | ||||||| ||||| ||||||| | |  || ||||    
T  35057213 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttttagataattttgttagctttccaatggctttagttt 35057114  T
Q  102 gacgtgaaaatctttt 117  Q
    ||| ||||||| ||||    
T  35057113 gacttgaaaatgtttt 35057098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 8759860 - 8759946
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| | |||||| ||||||| ||||||| ||||| |||||||    
T  8759860 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtgaacatgaaagttgtagataattttgttagctttcca 8759946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 8767606 - 8767716
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| || |||| ||||||||||||||||||||| |||| ||||||| | |||||| ||||||| |||| || ||||| ||||||| | |  |||||||    
T  8767606 tgttcttgggtctttttcacacatttctgttttgaattggcctttggtgtgaacatgaaagttgtagatacttttgttagctttccaatggctttggttt 8767705  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  8767706 gacatgaaaat 8767716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 20183266 - 20183184
Alignment:
Q  8 tgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagt 90  Q
    ||||||| |||||||| |||| ||||||| || | ||||||| |||||||| ||||||| ||||||||||||| |||||||||    
T  20183266 tgcgtctttttcacacgtttccgttttgaattcgcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagt 20183184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 22152725 - 22152807
Alignment:
Q  8 tgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagt 90  Q
    ||||||| |||||||| |||| ||||||| || | ||||||| |||||||| ||||||| ||||||||||||| |||||||||    
T  22152725 tgcgtctttttcacacgtttccgttttgaattcgcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagt 22152807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 22556958 - 22556848
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| || |||| ||||||||||||   |||| ||| |  |||||||    
T  22556958 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaacttgtagataattgtgtttgatttctagtggatttggttt 22556859  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  22556858 gacttgaaaat 22556848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 29045019 - 29044909
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||  ||||||| |||||||  ||||| | ||||||||||||| ||||||||| |  |||||||    
T  29045019 tgttcttgcgtctttttcacacgtttctgttttgaattgacctttggtgtaaacataaaagttttagataattgtgttagctttccagtggctttggttt 29044920  T
Q  102 gacgtgaaaat 112  Q
     || |||||||    
T  29044919 tacttgaaaat 29044909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 13765054 - 13764945
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| |||||||  |||||||||||| |||| ||||||| |||||||| ||||| | ||||||| ||||| ||||||| | |  ||||||||    
T  13765054 gttcttgcgtctttttcacatgtttctgttttgaattggcctttggtgtaaacatgaaagttttagataattttgttagctttccaatggctttggtttg 13764955  T
Q  103 acgtgaaaat 112  Q
    || |||||||    
T  13764954 acttgaaaat 13764945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 15891923 - 15892008
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||  ||||||| ||||||| ||||| |||||||    
T  15891923 gttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacattaaagttgtagataattttgttagctttcca 15892008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 28288851 - 28288936
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| ||||||| |||||||  |||||||||||| ||||||||| || |||||||| ||||||| ||||||| ||||| |||||||    
T  28288851 gttcttgcgtctttttcacatgtttctgttttgaattggtctttagtgtaaacatgaaagttgtagataattttgttagctttcca 28288936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 34296611 - 34296680
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgata 71  Q
    ||||| ||||||| |||||||||||||||||||||||||  ||||||| |||||||| ||||||| ||||    
T  34296611 tgttcttgcgtctttttcacacatttctgttttgagttgacctttggtgtaaacatgaaagttgtagata 34296680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 14593969 - 14594053
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcc 87  Q
    |||| ||||||| |||||||| |||||||||||| |||  ||||||| |||||||| ||||||| ||||||| ||||| ||||||    
T  14593969 gttcttgcgtctttttcacacgtttctgttttgacttgacctttggtgtaaacatgaaagttgtagataattttgttagctttcc 14594053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 18455429 - 18455525
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    |||||||| |||  ||||||| |||| ||||||| |||||||| ||||||| | ||||||||||| ||||||||| |  |||||||||| |||||||    
T  18455429 tttcacacgttttggttttgaattggcctttggtgtaaacatgaaagttgtaggtaattgtgttagctttccagtggctttggtttgacttgaaaat 18455525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 4477368 - 4477281
Alignment:
Q  1 gtgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||||| || |||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| |||||||  |||| |||||||    
T  4477368 gtgttcttgtgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataatttcgttagctttcca 4477281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 23838709 - 23838622
Alignment:
Q  1 gtgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||||| || |||| |||||||| |||||||||||| |||| ||| ||| |||||||| ||||||| ||||||| ||||| |||||||    
T  23838709 gtgttcttgtgtctttttcacacgtttctgttttgaattggccttcggtgtaaacatgaaagttgtagataattttgttagctttcca 23838622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 27654572 - 27654647
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttc 86  Q
    |||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||| ||||| |||||    
T  27654572 gtctttttcacacgtttctgttttgaattggactttggtgtaaacatgaaagttgtagataattttgttagctttc 27654647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 997 - 911
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    ||||| ||| ||| |||||||| ||||||||||||||||  ||||||| |||||||  ||||||| ||||||| ||||| |||||||    
T  997 tgttcttgcatctttttcacacgtttctgttttgagttgacctttggtgtaaacataaaagttgtagataattttgttagctttcca 911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 1540425 - 1540511
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    ||||| |||||||  ||||||| |||||||||||| || | ||||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  1540425 tgttcttgcgtcttgttcacacgtttctgttttgaattagcctttggtgtaaacatgaaagttgtagataattttgttagctttcca 1540511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 7219211 - 7219277
Alignment:
Q  8 tgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataatt 74  Q
    ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| |||||||    
T  7219211 tgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataatt 7219277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 19858436 - 19858546
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| ||| |||||||| || | ||||||| |||||||  ||||||| ||||||||||||| ||||| ||| |  | |||||    
T  19858436 tgttcttgcgtctttttcacacgtttttgttttgaattagcctttggtgtaaacataaaagttgtagataattgtgttagctttctagtggcgtcggttt 19858535  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  19858536 gacttgaaaat 19858546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 23221553 - 23221464
Alignment:
Q  23 catttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    |||||||||||||| |||| |||| || |||||||| ||||| | ||||||||||||| ||||||| |  | |||||||||| |||||||    
T  23221553 catttctgttttgaattggcctttagtgtaaacatgaaagttttagataattgtgttagctttccaatttttttggtttgacttgaaaat 23221464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 22782861 - 22782789
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||||||| |||||||||||| ||   ||||||| |||||||| ||||||| ||||||||||||| |||||||    
T  22782861 tttcacacgtttctgttttgaattaccctttggtgtaaacatgaaagttgtagataattgtgttagctttcca 22782789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 86
Target Start/End: Complemental strand, 25175246 - 25175171
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttc 86  Q
    |||| |||||||| |||||||||||| |||| ||||||| |||||||  ||||||| ||||||| ||||| |||||    
T  25175246 gtctttttcacacgtttctgttttgaattggactttggtgtaaacatcaaagttgtagataattttgttagctttc 25175171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 12742966 - 12742880
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    ||||| ||||||| |||||||| ||||||||||||  |||  |||||| |||| || |||||||| ||||||| ||||| |||||||    
T  12742966 tgttcttgcgtctttttcacacgtttctgttttgaactgggttttggtgtaaaaatataagttgtagataattttgttagctttcca 12742880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 19234794 - 19234716
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgtta 80  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| ||||||||  |||| | || ||||||||||    
T  19234794 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgatagttttagacaattgtgtta 19234716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 26923961 - 26924071
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||| |||||||  |||  |||||| |||| ||| ||||||| ||||||||||||| |||| |||| |  | |||||    
T  26923961 tgttcttgcgtctttttcacacgtttccgttttgaaatgggttttggtgtaaaaatgaaagttgtagataattgtgttagctttacagtggcgtcggttt 26924060  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  26924061 gacttgaaaat 26924071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 34140970 - 34141044
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgt 76  Q
    ||||| ||||||| |||||||| |||||||||||| || | ||||||| |||||||| ||||| | |||||||||    
T  34140970 tgttcttgcgtctttttcacacgtttctgttttgaattagcctttggtgtaaacatgaaagttttagataattgt 34141044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 34153586 - 34153660
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgt 76  Q
    ||||| ||||||| |||||||| |||||||||||| || | ||||||| |||||||| ||||| | |||||||||    
T  34153586 tgttcttgcgtctttttcacacgtttctgttttgaattagcctttggtgtaaacatgaaagttttagataattgt 34153660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 19008919 - 19008847
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataatt 74  Q
    ||||| ||| ||| |||||||| |||||||||||| |||| |||| || |||||||| ||||||| |||||||    
T  19008919 tgttcttgcatctttttcacacgtttctgttttgaattggcctttcgtgtaaacatgaaagttgtagataatt 19008847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 25619314 - 25619410
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    |||||| | |||||||||||| || |  || ||| |||||||| ||||||| |||||||| |||| ||||||||| |  |||||||||| |||||||    
T  25619314 tttcacccttttctgttttgaatttgctttcggtgtaaacatgaaagttgtagataattgagttagctttccagtggctttggtttgacttgaaaat 25619410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 16826343 - 16826418
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttc 86  Q
    |||| ||||||  ||||||||||||| |||| ||||||| |||||||| ||||||| || |||| ||||| |||||    
T  16826343 gtctttttcacctatttctgttttgaattggactttggtgtaaacatgaaagttgtagacaattttgttagctttc 16826418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 223
Target Start/End: Complemental strand, 10445375 - 10445326
Alignment:
Q  173 aatatgatgtctatatgatgttattcatggttgatgaatagtgagattatg 223  Q
    ||||||||| ||||| |||||||||||| |||||||||| |||||||||||    
T  10445375 aatatgatgcctataggatgttattcat-gttgatgaattgtgagattatg 10445326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 19609701 - 19609651
Alignment:
Q  24 atttctgttttgagttggtctttggtataaacatgtaagttgttgataatt 74  Q
    ||||||||||||| |||| ||||||| |||||||| ||||||| |||||||    
T  19609701 atttctgttttgaattggactttggtgtaaacatgaaagttgtagataatt 19609651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 197
Target Start/End: Original strand, 31346563 - 31346615
Alignment:
Q  144 gaagatgtatgaatgaattattgttgttaaatatgatgtctatatgatgttatt 197  Q
    |||||||||||| | |||| |||||||| ||||||||| |||||||||||||||    
T  31346563 gaagatgtatga-taaattgttgttgtttaatatgatgcctatatgatgttatt 31346615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 5834092 - 5834164
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||||| | |||||||||||| || | ||||||| |||||||| ||||| | ||||||| ||||| |||||||    
T  5834092 tttcacccgtttctgttttgaattagcctttggtgtaaacatgaaagttttagataattttgttagctttcca 5834164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 18398585 - 18398517
Alignment:
Q  44 tttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    ||||||||||||||| ||||| | ||||||||||||| ||||| | | |  |||||||||| |||||||    
T  18398585 tttggtataaacatgaaagttttagataattgtgttagctttctattggatttggtttgacttgaaaat 18398517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 27317902 - 27317974
Alignment:
Q  8 tgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgtta 80  Q
    ||||||| ||| |||| |||||||||||| || | ||||||  |||||||| ||||||| |||||||| ||||    
T  27317902 tgcgtcttttttacacgtttctgttttgaattagcctttggagtaaacatgaaagttgtagataattgagtta 27317974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 104; Significance: 5e-52; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 16 - 235
Target Start/End: Original strand, 60324 - 60540
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaatctt 115  Q
    |||||||| |||||||||| |||||||| ||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||  || || |||||||    
T  60324 tttcacacgtttctgttttaagttggtccttggtgtaaacatgaaagttgttgataactgtgttatctttccagtagtcttggttcaacatgtaaatctt 60423  T
Q  116 ttgtgtataatttaacannnnnnnnnatgaagatgtatgaatgaattattgttgttaaatatgatgtctatatgatgttattcatggttgatgaatagtg 215  Q
    || || |||||||||||         | |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||| |||    
T  60424 ttttggataatttaaca--tgcttttacgaagatgtttgaatgaattattgttgttaaatatcatgtctatatgatgttattcat-gttaatgaattgtg 60520  T
Q  216 agattatgttgcgaagttga 235  Q
    |||||||| ||| |||||||    
T  60521 agattatgatgcaaagttga 60540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 6166 - 6057
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||  |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| |||||||||||||  |||||||| |  ||||||||    
T  6166 gttcttgcgtccttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgtgttagatttccagtggctttggtttg 6067  T
Q  103 acgtgaaaat 112  Q
    || |||||||    
T  6066 acttgaaaat 6057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 31611 - 31432
Alignment:
Q  1 gtgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtt 100  Q
    |||||| || |||| | ||||||||||||||||||| |||  ||||||| |||||||| ||||||||||||||||||||||||||||||| ||||| |||    
T  31611 gtgttcttgtgtctttctcacacatttctgttttgatttgacctttggtgtaaacatgaaagttgttgataattgtgttatctttccagttgtctttgtt 31512  T
Q  101 tgacgtgaaaatcttttgtgtataatttaacannnnnnnnnatgaagatgtatgaatgaattattgttgttaaatatgatgt 182  Q
    |||| ||||||||||||||| |||||||||||         | |||||||||||||||||||||||||||||||||||||||    
T  31511 tgacatgaaaatcttttgtggataatttaaca--tgtttttacgaagatgtatgaatgaattattgttgttaaatatgatgt 31432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 23075 - 22845
Alignment:
Q  1 gtgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtt 100  Q
    |||||| ||| ||| ||||||||||| || ||  |||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||| |||||||    
T  23075 gtgttcttgcatctgtttcacacattgctattcggagttggtctttggtataaacatgaaagttgttgataattctgttatcttttcagtagccttggtt 22976  T
Q  101 tgacgtgaaaatcttttgtgtataatttaacannnnnnnnnatgaagatgtatgaatgaattattgttgttaaatatgatgtctatatgatgttattcat 200  Q
    |||||||| |||| |||||| |||||||||||         |  |||||||||| ||||||||||| | || |||| |||||||||||||||||||||||    
T  22975 tgacgtgataatcctttgtggataatttaacatgtttttaca--aagatgtatg-atgaattattgctctttaataagatgtctatatgatgttattcat 22879  T
Q  201 ggttgatgaatagtgagattatgttgcgaagttga 235  Q
     ||| |||||| ||||||||| | |||||||||||    
T  22878 -gttaatgaattgtgagattacgatgcgaagttga 22845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 26182 - 26114
Alignment:
Q  44 tttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    |||||| |||||||| ||||||| ||||||||||||| ||||||||| |  |||||||||| |||||||    
T  26182 tttggtgtaaacatgaaagttgtagataattgtgttagctttccagtggctttggtttgacttgaaaat 26114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 87; Significance: 8e-42; HSPs: 2)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 9831 - 9945
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaatctt 115  Q
    ||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||    
T  9831 tttcacacatttctgttttgaattggtctttggtataaatatggaagttgttgataattgtgttaactttccagtagccttggtttgacatgaaaatctt 9930  T
Q  116 ttgtgtataatttaa 130  Q
    ||||| |||||||||    
T  9931 ttgtgaataatttaa 9945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 130
Target Start/End: Original strand, 27259 - 27386
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| ||| ||||||||  | ||||| ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||||    
T  27259 gttcttgcgtcttttttacacattttcgctttgaattggtctttggtataaatatggaagttgttgataattgtgttatcttttcagtagccttggtttg 27358  T
Q  103 acgtgaaaatcttttgtgtataatttaa 130  Q
    || ||||||||||||||| |||||||||    
T  27359 acatgaaaatcttttgtgaataatttaa 27386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 3 - 130
Target Start/End: Original strand, 7896 - 8023
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| ||||||||||||||||||||| | |   |||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  7896 gttcttgcgtctttttcacacatttctgttttgattcgacatttggtgtaaacatgaaagttgttgataattgtgttatctttccagtagccttggtttg 7995  T
Q  103 acgtgaaaatcttttgtgtataatttaa 130  Q
    |||||||||||||||||| |||||||||    
T  7996 acgtgaaaatcttttgtggataatttaa 8023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1102 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold1102
Description:

Target: scaffold1102; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 25 - 132
Target Start/End: Original strand, 2532 - 2639
Alignment:
Q  25 tttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaatcttttgtgtata 124  Q
    |||||| ||||| |||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||    
T  2532 tttctgatttgaattggtctttggtgtaaacatgaaagttgttgataattgtgttacctttccagtagtcttggtttgacgtgaaaatattttgtggata 2631  T
Q  125 atttaaca 132  Q
    ||||||||    
T  2632 atttaaca 2639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 76; Significance: 3e-35; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 130
Target Start/End: Complemental strand, 65582 - 65455
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||| | ||||| || |||||||||||| || |||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  65582 gttcttgcgtttgtttcatacgtttctgttttgaattagtcttttgtataaacatgaaagttgttgataattgtgttatctttccagtagccttggtttg 65483  T
Q  103 acgtgaaaatcttttgtgtataatttaa 130  Q
    || ||||||| ||||||| |||||||||    
T  65482 acatgaaaatattttgtggataatttaa 65455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 130
Target Start/End: Complemental strand, 75049 - 74922
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| ||||| ||||||||||||||| |  |||||| ||||||||||| ||||||||||||||||||||||||||||||||| | |||||||    
T  75049 gttcttgcgtctgtttcatacatttctgttttgaataagtcttttgtataaacatgaaagttgttgataattgtgttatctttccagtagccgtggtttg 74950  T
Q  103 acgtgaaaatcttttgtgtataatttaa 130  Q
    || ||||||| ||||||| |||||||||    
T  74949 acatgaaaatattttgtggataatttaa 74922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 112
Target Start/End: Original strand, 66383 - 66485
Alignment:
Q  10 cgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaa 109  Q
    ||||| |||||||| |||||||||||| |||| ||||| | | |||||  ||||| | ||||||||||||| ||||||||| |  ||| |||||| ||||    
T  66383 cgtctttttcacacgtttctgttttgaattggcctttgatgttaacataaaagttttagataattgtgttagctttccagtggctttgatttgacttgaa 66482  T
Q  110 aat 112  Q
    |||    
T  66483 aat 66485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 130
Target Start/End: Original strand, 7000 - 7119
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaa 110  Q
    |||| |||||||| ||| ||||||||||||  |||| || |||||||||||||| | ||||||||||||||||||| ||||| |||||||||||||||||    
T  7000 gtctgtttcacacgtttttgttttgagttgccctttagtgtaaacatgtaagttatagataattgtgttatctttctagtagccttggtttgacgtgaaa 7099  T
Q  111 atcttttgtgtataatttaa 130  Q
    |||||||||| |||||||||    
T  7100 atcttttgtggataatttaa 7119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 3 - 130
Target Start/End: Complemental strand, 8476 - 8349
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| |||||||| ||| ||||||||||||   ||| || |||||||||||||| ||||| ||||||||||||||| ||||| |||||||||    
T  8476 gttcttgcgtctgtttcacacgtttttgttttgagttgacatttagtgtaaacatgtaagttattgatcattgtgttatctttcaagtagccttggtttg 8377  T
Q  103 acgtgaaaatcttttgtgtataatttaa 130  Q
    |||||||||||||||||| |||||||||    
T  8376 acgtgaaaatcttttgtggataatttaa 8349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 36 - 223
Target Start/End: Original strand, 6312 - 6495
Alignment:
Q  36 agttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaatcttttgtgtataatttaacannn 135  Q
    |||||||||||  | || ||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |       
T  6312 agttggtctttactgtagacatgaaagttattgataattgtgttatctttccagtagccttggtttgacgtgaaaatcttttgtggataatttaata--t 6409  T
Q  136 nnnnnnatgaagatgtatgaatgaattattgttgttaaatatgatgtctatatgatgttattcatggttgatgaatagtgagattatg 223  Q
          | ||||||||||| ||||||| | |||||| ||||||||| |||||||||| |||||   |||||||||| |||||||||||    
T  6410 gtttttacgaagatgtatg-atgaattgtggttgtttaatatgatgcctatatgatgctattc-cagttgatgaattgtgagattatg 6495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 30321 - 30233
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagt 90  Q
    ||||| ||||||| |||||||| |||||||||||| |||| |||| || |||||||| ||||||| ||||||||||||| |||||||||    
T  30321 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttagtgtaaacatgaaagttgtagataattgtgttagctttccagt 30233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 68; Significance: 2e-30; HSPs: 4)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 130
Target Start/End: Complemental strand, 15673 - 15546
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| ||||| || |||||||||||| || ||||||  |||||||||| |||||||| |||||||||||||||||||| ||| ||||| |||    
T  15673 gttcttgcgtctgtttcatacgtttctgttttgaattagtcttttatataaacatgaaagttgtttataattgtgttatctttccattagccttgggttg 15574  T
Q  103 acgtgaaaatcttttgtgtataatttaa 130  Q
    || ||||||||||||||| |||||||||    
T  15573 acatgaaaatcttttgtggataatttaa 15546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 130
Target Start/End: Complemental strand, 4593 - 4466
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| ||||| || ||| |||||||| || |||||| ||||||||||  ||||| |||||||||||||||||||||||  || |||||||||    
T  4593 gttcttgcgtctgtttcatacgtttatgttttgaattagtcttttgtataaacataaaagttcttgataattgtgttatctttccaagagccttggtttg 4494  T
Q  103 acgtgaaaatcttttgtgtataatttaa 130  Q
    || ||||||||||||||| |||||||||    
T  4493 acatgaaaatcttttgtggataatttaa 4466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 130
Target Start/End: Complemental strand, 10714 - 10587
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| ||||| || ||| |||||||| || |||||| ||||||||||  ||||| |||||||||||||||||||||||  || |||||||||    
T  10714 gttcttgcgtctgtttcatacgtttatgttttgaattagtcttttgtataaacataaaagttcttgataattgtgttatctttccaagagccttggtttg 10615  T
Q  103 acgtgaaaatcttttgtgtataatttaa 130  Q
    || ||||||||||||||| |||||||||    
T  10614 acatgaaaatcttttgtggataatttaa 10587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 20431 - 20527
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    |||||||| |||||||||||| ||||  |||||| |||||||| ||||| | |||||||||||||   ||||| | || |||||||||| |||||||    
T  20431 tttcacacgtttctgttttgaattggattttggtgtaaacatgaaagttttagataattgtgttagtgttccaatggttttggtttgacttgaaaat 20527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1160 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold1160
Description:

Target: scaffold1160; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 394 - 284
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| || ||||| |||||||||||| |||| ||||||| || ||||| ||||||| ||||||||||||| ||||||||| || |||||||    
T  394 tgttcttgcgtcttttacacacgtttctgttttgaattggcctttggtgtacacatgaaagttgtagataattgtgttagctttccagtggttttggttt 295  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  294 gacttgaaaat 284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 55; Significance: 1e-22; HSPs: 5)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 34048 - 33938
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| |||||||| |||| | |||||||||  | |||||    
T  34048 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgagttagcattccagtagcttcggttt 33949  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  33948 gacgtgaaaat 33938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 17599 - 17710
Alignment:
Q  1 gtgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtt 100  Q
    |||||| || |||| |||||||| |||||||||||| |||  ||||| | |||||||| ||||||| ||||||| ||||| ||||||| | |  ||||||    
T  17599 gtgttcttgtgtctttttcacacgtttctgttttgaattgacctttgatgtaaacatgaaagttgtagataattttgttagctttccaatggctttggtt 17698  T
Q  101 tgacgtgaaaat 112  Q
    |||| |||||||    
T  17699 tgacttgaaaat 17710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 22522 - 22600
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgtta 80  Q
    ||||| ||||||| |||||||| |||||||||||| |||  ||||||| |||||||| ||||||| ||||||| |||||    
T  22522 tgttcttgcgtctttttcacacgtttctgttttgaattgacctttggtgtaaacatgaaagttgtagataattttgtta 22600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 40112 - 40043
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgata 71  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||    
T  40112 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagata 40043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 23277 - 23192
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    ||||| ||||||| |||||||  |||||||||||| |||  ||||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  23277 tgttcttgcgtctttttcacag-tttctgttttgaattgacctttggtgtaaacatgaaagttgtagataattttgttagctttcca 23192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 64412 - 64522
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| |||||||||||||  |||||||| |  |||||||    
T  64412 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgtgttagatttccagtggctttggttt 64511  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  64512 gacttgaaaat 64522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 31844 - 31774
Alignment:
Q  10 cgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgtta 80  Q
    ||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| |||||||||||||    
T  31844 cgtctttttcacacgtttctgttttgaattggactttggtgtaaacatgaaagttgtagataattgtgtta 31774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 78773 - 78663
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||| ||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| |||||||| |||| ||||||||| |  |||||||    
T  78773 tgttcttgcatctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgagttagctttccagtggctttggttt 78674  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  78673 gacgtgaaaat 78663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 169147 - 169037
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||| ||| |||||||| |||||||||||||||||  |||||| |||||||| ||||||| ||||||||||||| ||||||||| |  |||||||    
T  169147 tgttcttgcatctttttcacacgtttctgttttgagttggcttttggtgtaaacatgaaagttgtagataattgtgttagctttccagtggctttggttt 169048  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  169047 gacctgaaaat 169037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 4742 - 4633
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| |||||||| ||| |||||||| |||| ||||||| |||||||| ||||||| ||||||||||||| ||||||||| |  ||||||||    
T  4742 gttcttgcgtctttttcacacgtttttgttttgaattggcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagtggctttggtttg 4643  T
Q  103 acgtgaaaat 112  Q
    || |||||||    
T  4642 acttgaaaat 4633  T

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Target: scaffold0436 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 8666 - 8557
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||||||||| ||||||||| |  ||||||||    
T  8666 gttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagtggctttggtttg 8567  T
Q  103 acgtgaaaat 112  Q
    |  |||||||    
T  8566 aattgaaaat 8557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 4742 - 4633
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| |||||||| ||| |||||||| |||| ||||||| |||||||| ||||||| ||||||||||||| ||||||||| |  ||||||||    
T  4742 gttcttgcgtctttttcacacgtttttgttttgaattggcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagtggctttggtttg 4643  T
Q  103 acgtgaaaat 112  Q
    || |||||||    
T  4642 acttgaaaat 4633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 900 - 804
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    |||||||| ||||||||||||||||| ||||||| |||||||| ||||||| |||||||| |||| |||| |||| |  ||||||||||||||||||    
T  900 tttcacacgtttctgttttgagttggcctttggtgtaaacatgaaagttgtagataattgagttagcttttcagttgctttggtttgacgtgaaaat 804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 112
Target Start/End: Complemental strand, 21771 - 21667
Alignment:
Q  8 tgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtg 107  Q
    |||||||  |||||||||||||||||||| |||| ||||||| |||||||| ||||||| |||||||| ||||  |||||||| |  |||||||||||||    
T  21771 tgcgtcttgttcacacatttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgagttagatttccagtggatttggtttgacgtg 21672  T
Q  108 aaaat 112  Q
    |||||    
T  21671 aaaat 21667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 3284 - 3395
Alignment:
Q  1 gtgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtt 100  Q
    |||||| ||||||| ||||||||||||||||||| | |||| ||||||| |||||||| |||||||  |||||||||||| ||||||| | |  ||||||    
T  3284 gtgttcttgcgtctttttcacacatttctgttttaaattggcctttggtgtaaacatgaaagttgtcaataattgtgttagctttccaatggctttggtt 3383  T
Q  101 tgacgtgaaaat 112  Q
    |||| |||||||    
T  3384 tgacttgaaaat 3395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 86
Target Start/End: Complemental strand, 8700 - 8625
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttc 86  Q
    |||| |||||||  |||||||||||| |||| ||||||| |||||||| ||||| | ||||||| ||||| |||||    
T  8700 gtctttttcacaagtttctgttttgaattggcctttggtgtaaacatgaaagttttagataattatgttagctttc 8625  T

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Target: scaffold0048 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 56685 - 56586
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||| |||||||||||||||  ||||||| ||||||||||||| ||||||| | || |||||||    
T  56685 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtataaacattaaagttgtagataattgtgttagctttccattggttttggttt 56586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 5056 - 5166
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| ||||  |||| ||||| |||| ||||||| |||||||| |||| ||||||||| |  |||||||    
T  5056 tgttcttgcgtctttttcacacgtttctgttttgaattggcatttgatataaccatgaaagttgtagataattgagttagctttccagtggctttggttt 5155  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  5156 gacgtgaaaat 5166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 13008 - 13118
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||  ||||||| |||||||| ||||||| |||||||| |||| ||||||||| |  ||||| |    
T  13008 tgttcttgcgtctttttcacacgtttctgttttgaattgacctttggtgtaaacatgaaagttgtagataattgagttagctttccagtggctttggtgt 13107  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  13108 gacgtgaaaat 13118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 14041 - 13931
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| || | ||||||| |||||||| ||||||| ||||||||||||| ||||||||| |  | |||||    
T  14041 tgttcttgcgtctttttcacacgtttctgttttgaattagcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagtggaatcggttt 13942  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  13941 gacttgaaaat 13931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 7222 - 7112
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| |||||||| |||| || |||||| |  |||||||    
T  7222 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgagttagctctccagtggctttggttt 7123  T
Q  102 gacgtgaaaat 112  Q
    ||||| |||||    
T  7122 gacgtaaaaat 7112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 3979 - 3893
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    ||||| || |||| |||||||| ||||||||||||||| ||||||||| |||||||| ||||||| ||||||||||||| |||||||    
T  3979 tgttcttgagtctttttcacacgtttctgttttgagttagtctttggtgtaaacatgaaagttgtagataattgtgttagctttcca 3893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 24406 - 24516
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||| | |||||||||||| |||| ||||||| |||||||| ||||||| ||||||||||||| ||||||||| |  |||||||    
T  24406 tgttcttgcgtctttttcacccgtttctgttttgaattggactttggtgtaaacatgaaagttgtagataattgtgttagctttccagtggctttggttt 24505  T
Q  102 gacgtgaaaat 112  Q
     || |||||||    
T  24506 tacttgaaaat 24516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 38470 - 38360
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| || | ||||||| |||||||| ||||||| ||||||||||||| ||||||||| |  | |||||    
T  38470 tgttcttgcgtctttttcacacgtttctgttttgaattagcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagtggcgtcggttt 38371  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  38370 gacttgaaaat 38360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 6126 - 6016
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||  ||||||| ||||||||||||| ||||||| | |  |||||||    
T  6126 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacattaaagttgtagataattgtgttagctttccattggatttggttt 6027  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  6026 gacttgaaaat 6016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 7126 - 7236
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||| | |||||||| ||||| |  |||||||||||| ||||||||| |  |||||||    
T  7126 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttgatgtaaacatgaaagttttatataattgtgttagctttccagtggctttggttt 7225  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  7226 gacttgaaaat 7236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 51; Significance: 2e-20; HSPs: 4)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 21790 - 21680
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| ||| |||||||| |||| ||||||| |||||||| ||||||| ||||||||||||| ||||||||| |  |||||||    
T  21790 tgttcttgcgtctttttcacacgtttttgttttgaattggcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagtggctttggttt 21691  T
Q  102 gacgtgaaaat 112  Q
     || |||||||    
T  21690 aacttgaaaat 21680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 146441 - 146332
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||| ||| |||||||| || ||||||||| |||| ||||||| |||||||| ||||||| |||||||| |||  ||||||||| |  |||||||    
T  146441 tgttcttgcatctttttcacacgttcctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgagtttgctttccagtggctttggttt 146342  T
Q  102 gacgtgaaaa 111  Q
    ||||||||||    
T  146341 gacgtgaaaa 146332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 111187 - 111110
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  111187 gtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattttgttagctttcca 111110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 123903 - 123981
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgtta 80  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| | |||||| ||||||| ||||||| |||||    
T  123903 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtgaacatgaaagttgtagataattttgtta 123981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 95059 - 94949
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| || | ||||||| |||||||| ||||||| ||||||||||||| ||||||||| |  | |||||    
T  95059 tgttcttgcgtctttttcacacgtttctgttttgaattagcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagtggcgtcggttt 94960  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  94959 gacttgaaaat 94949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 105603 - 105511
Alignment:
Q  19 cacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    |||||||||||||||||| |||| ||||||| |||||||| || |||| ||||||| ||||| ||||||| | |  |||||||||| |||||||    
T  105603 cacacatttctgttttgaattggcctttggtgtaaacatg-aaattgtagataattttgttagctttccaatggctttggtttgacttgaaaat 105511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 186848 - 186950
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| |||||||||||||  |||||||| |  |||||||    
T  186848 tgttcttgcgtctttttcacacgtttctgttttgatttggcctttggtgtaaacatgaaagttgtagataattgtgttagttttccagtggctttggttt 186947  T
Q  102 gac 104  Q
    |||    
T  186948 gac 186950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 6945 - 7042
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtag-tcttggtttgacgtgaaaat 112  Q
    |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| |||||||| |||| ||||||||| | | ||||||||||||||||||    
T  6945 tttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgagttagctttccagtggcttttggtttgacgtgaaaat 7042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 50; Significance: 9e-20; HSPs: 3)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 10929 - 10820
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||| ||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||||||||| |||| ||||||  |||||||     
T  10929 gttcttgcatctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgtgttagcttttcagtagctttggtttc 10830  T
Q  103 acgtgaaaat 112  Q
    || |||||||    
T  10829 acttgaaaat 10820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 1013 - 917
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||||||||| ||||| ||| |  |||||||||| |||||||    
T  1013 tttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgtgttagctttctagtgggtttggtttgacttgaaaat 917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 6519 - 6423
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||||||||| ||||| ||| |  |||||||||| |||||||    
T  6519 tttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgtgttagctttctagtgggtttggtttgacttgaaaat 6423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 33819 - 33710
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| |||||||| |||||||||||| |||| ||||||| |||||| | ||||||| ||||||||||||| |||||||||    ||||||||    
T  33819 gttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaacaggaaagttgtagataattgtgttagctttccagtgactttggtttg 33720  T
Q  103 acgtgaaaat 112  Q
    || |||||||    
T  33719 acttgaaaat 33710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 50; Significance: 9e-20; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 42401 - 42292
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| ||||| || |||||||||||| |||| ||||||| |||| ||| ||||||| |||||||||||||||| |||||| |  ||||||||    
T  42401 gttcttgcgtctttttcatacgtttctgttttgaattggcctttggtgtaaatatgaaagttgtagataattgtgttatctatccagtggctttggtttg 42302  T
Q  103 acgtgaaaat 112  Q
    || |||||||    
T  42301 acatgaaaat 42292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 21471 - 21360
Alignment:
Q  1 gtgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtt 100  Q
    |||||| ||||||| || ||||| |||||||||||| |||| ||||||| |||||||| ||||| | ||||||| ||||| ||||||| | |  ||||||    
T  21471 gtgttcttgcgtcttttacacacgtttctgttttgaattggcctttggtgtaaacatgaaagttttagataattttgttagctttccaatggctttggtt 21372  T
Q  101 tgacgtgaaaat 112  Q
    |||| |||||||    
T  21371 tgacttgaaaat 21360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 22113 - 22222
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| |||||||  |||||||||||| |||| ||||||| |||||||| ||||||| ||||||||||||| ||||||||| |  || |||||    
T  22113 gttcttgcgtctttttcacatgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgtgttaactttccagtggattttgtttg 22212  T
Q  103 acgtgaaaat 112  Q
    || |||||||    
T  22213 acttgaaaat 22222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 4115 - 4019
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    |||||||| |||||||||||||||||  |||||| |||||||| ||||||| ||||||||||||| ||||||||| |   ||||||||| |||||||    
T  4115 tttcacacgtttctgttttgagttggcttttggtgtaaacatgaaagttgtagataattgtgttagctttccagtggctctggtttgacttgaaaat 4019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0401 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 8529 - 8441
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagt 90  Q
    ||||| ||||||| |||||||| |||| ||||||| |||| ||||||| |||||||| ||||||| ||||||||||||| |||||||||    
T  8529 tgttcttgcgtctttttcacacgtttccgttttgaattggcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagt 8441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 58443 - 58347
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    |||||||| |||||||||||| |||| ||||||| |||| ||| ||||||| |||||||| |||| ||||||||| |  ||||||||||||||||||    
T  58443 tttcacacgtttctgttttgaattggcctttggtgtaaatatgaaagttgtagataattgagttagctttccagtggctttggtttgacgtgaaaat 58347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 68595 - 68524
Alignment:
Q  17 ttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    ||||||| |||||||||||| || | ||||||| |||||||| ||||| | ||||||| ||||| |||||||    
T  68595 ttcacacgtttctgttttgaattagcctttggtgtaaacatgaaagttttagataattttgttagctttcca 68524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 14935 - 15035
Alignment:
Q  8 tgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtg 107  Q
    ||||||| |||||||  |||||||||||| |||| ||||||| |||||||| ||||||| |||||||| |||| ||||||||| |  |||||||||||||    
T  14935 tgcgtctttttcacatgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgagttagctttccagtggctttggtttgacgtg 15034  T
Q  108 a 108  Q
    |    
T  15035 a 15035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 23993 - 24093
Alignment:
Q  8 tgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtg 107  Q
    ||||||| |||||||  |||||||||||| |||| ||||||| |||||||| ||||||| |||||||| |||| ||||||||| |  |||||||||||||    
T  23993 tgcgtctttttcacatgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgagttagctttccagtggctttggtttgacgtg 24092  T
Q  108 a 108  Q
    |    
T  24093 a 24093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 21965 - 21854
Alignment:
Q  1 gtgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtt 100  Q
    |||||| | ||||| || ||||| |||||||||||| |||| ||||||| |||||||| ||||||||||||||| ||||| ||||||| | |  ||||||    
T  21965 gtgttcttacgtcttttacacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgttgataattttgttagctttccaatggctttggtt 21866  T
Q  101 tgacgtgaaaat 112  Q
    |||| |||||||    
T  21865 tgacttgaaaat 21854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 810 - 920
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||  ||||||| |||||||| ||||||| |||||||| ||||  |||||||| |  |||| ||    
T  810 tgttcttgcgtctttttcacacgtttctgttttgaattgacctttggtgtaaacatgaaagttgtagataattgagttagatttccagtggctttggatt 909  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  910 gacgtgaaaat 920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 1420 - 1318
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| || | ||||||| |||||||| ||||||| |||||||||||||  |||||||| |  |||||||    
T  1420 tgttcttgcgtctttttcacacgtttctgttttgattttgcctttggtgtaaacatgaaagttgtagataattgtgttagttttccagtggctttggttt 1321  T
Q  102 gac 104  Q
    |||    
T  1320 gac 1318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 7593 - 7483
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||| ||| |||| ||||||| |||| ||| ||||| | ||||||||||||| ||||| ||| || |||||||    
T  7593 tgttcttgcgtctttttcacacgtttctgttctgaattggcctttggtgtaaatatgaaagttttagataattgtgttagctttctagtggtattggttt 7494  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  7493 gacttgaaaat 7483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 10260 - 10370
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||  ||||||| |||||||| ||||||| ||||||| ||||| ||||||| | |  |||||||    
T  10260 tgttcttgcgtctttttcacacgtttctgttttgaattgacctttggtgtaaacatgaaagttgtagataattttgttagctttccaatggatttggttt 10359  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  10360 gacttgaaaat 10370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 10790 - 10900
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| ||| |||  |||||||||||| |||  ||||||| |||||||| ||||||| ||||||||||||| ||||||||| |  |||||||    
T  10790 tgttcttgcgtcttttttacatgtttctgttttgaattgccctttggtgtaaacatgaaagttgtagataattgtgttaactttccagtggctttggttt 10889  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  10890 gacttgaaaat 10900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 12879 - 12989
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||| ||| ||||||||  ||||||||| | |||| ||||||| |||||||| ||||||| |||||||| ||||  |||||||| || |||||||    
T  12879 tgttcttgcatctttttcacacgattctgtttttaattggcctttggtgtaaacatgaaagttgtagataattgagttagatttccagtggttttggttt 12978  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  12979 gacgtgaaaat 12989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 3047 - 2937
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| |||  ||||||| |||||||| ||||||| ||||||| ||||| ||||||| | |  |||||||    
T  3047 tgttcttgcgtctttttcacacgtttctgttttgaattgacctttggtgtaaacatgaaagttgtagataattttgttagctttccaatggatttggttt 2948  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  2947 gacttgaaaat 2937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 321 - 429
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| || | ||||| |||||||||| ||||||| ||||||||||||| ||||||||| |  | |||||    
T  321 tgttcttgcgtctttttcacacgtttctgttttgaattagcctttg-tataaacatgaaagttgtagataattgtgttagctttccagtggcatcggttt 419  T
Q  102 gacgtgaaaa 111  Q
    ||| ||||||    
T  420 gacttgaaaa 429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 120619 - 120509
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| ||||||||  ||||||||||| |||| ||||||| |||||||| ||||||| |||||||| |||| ||||||||| |  || ||||    
T  120619 tgttcttgcgtctttttcacacgcttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgagttagctttccagtggctttagttt 120520  T
Q  102 gacgtgaaaat 112  Q
    |||| ||||||    
T  120519 gacgcgaaaat 120509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 29556 - 29651
Alignment:
Q  18 tcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaatc 113  Q
    |||||| |||||||||||| |||| ||||||| |||||||| ||||||| |||||||||||||  |||||||| |  ||| |||||| ||||||||    
T  29556 tcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgtgttagatttccagtggctttgatttgacttgaaaatc 29651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 11850 - 11960
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||| ||| |||||||| |||||||||||| |||| ||||||| |||||||| || |||| ||||||||||||| ||||||||| |  |||||||    
T  11850 tgttcttgcatctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaaattgtagataattgtgttagctttccagtggctttggttt 11949  T
Q  102 gacgtgaaaat 112  Q
     || |||||||    
T  11950 tacttgaaaat 11960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 47; Significance: 6e-18; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 169147 - 169038
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagt-agtcttggttt 101  Q
    |||| ||||||| |||||||| ||||||||||||||||| |||| || |||||||| ||||||| ||||||| ||||| ||||||| | | || ||||||    
T  169147 gttcttgcgtctttttcacacgtttctgttttgagttggcctttagtgtaaacatgaaagttgtagataattttgttagctttccaatgactc-tggttt 169049  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  169048 gacgtgaaaat 169038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 176500 - 176391
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagt-agtcttggttt 101  Q
    |||| ||||||| |||||||| ||||||||||||||||| |||| || |||||||| ||||||| ||||||| ||||| ||||||| | | || ||||||    
T  176500 gttcttgcgtctttttcacacgtttctgttttgagttggcctttagtgtaaacatgaaagttgtagataattttgttagctttccaatgactc-tggttt 176402  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  176401 gacgtgaaaat 176391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 152552 - 152663
Alignment:
Q  1 gtgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtt 100  Q
    |||||| |||||||  | ||||| |||||||||||| |||| ||||||| |||||||  ||||||| ||||||| ||||| ||||||| | || ||||||    
T  152552 gtgttcttgcgtcttatccacacgtttctgttttgaattggcctttggtgtaaacataaaagttgtagataattttgttagctttccaatggttttggtt 152651  T
Q  101 tgacgtgaaaat 112  Q
    |||| |||||||    
T  152652 tgacttgaaaat 152663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 112
Target Start/End: Complemental strand, 77388 - 77286
Alignment:
Q  10 cgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaa 109  Q
    ||||| |||||||  |||||||||||  |||| ||||||| |||||||| ||||||| |||||||| |||| ||||||||| |  ||| ||||||||| |    
T  77388 cgtctttttcacatgtttctgttttgcattggcctttggtgtaaacatgaaagttgtagataattgagttagctttccagtggctttgatttgacgtgga 77289  T
Q  110 aat 112  Q
    |||    
T  77288 aat 77286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 18301 - 18192
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| |||||||| |||||||||||| ||||  |||||| ||||| || ||||||| ||||||||||||| ||||||||| |  || |||||    
T  18301 gttcttgcgtctttttcacacgtttctgttttgaattggcttttggtgtaaacgtgaaagttgtagataattgtgttagctttccagtggcttttgtttg 18202  T
Q  103 acgtgaaaat 112  Q
    || |||||||    
T  18201 acatgaaaat 18192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 143322 - 143213
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||  |||||||||||| |||| ||||||| |||| ||| ||||||| |||||||| |||| ||||||||| || || ||||    
T  143322 tgttcttgcgtctttttcacatgtttctgttttgaattggcctttggtgtaaagatgaaagttgtagataattgagttagctttccagtggttttagttt 143223  T
Q  102 gacgtgaaaa 111  Q
    ||| ||||||    
T  143222 gacatgaaaa 143213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 169342 - 169450
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| ||| |||| |||||||||||| |||| ||||||| |||||||| |||||||  ||| ||| |||| ||||||||| |  || ||||    
T  169342 tgttcttgcgtctttttaacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgt--atagttgagttagctttccagtggctttagttt 169439  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  169440 gacgtgaaaat 169450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1354 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold1354
Description:

Target: scaffold1354; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 119
Target Start/End: Original strand, 244 - 360
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| |||||||| || |||||||||||||| |||| || || ||||| |||||  ||||||||| ||||| || ||||| || ||| ||||    
T  244 gttcttgcgtctgtttcacacgttactgttttgagttggcctttagtgtagacatgaaagttagtgataattgggttattttcccagtggttttgatttg 343  T
Q  103 acgtgaaaatcttttgt 119  Q
    ||||| |||||||||||    
T  344 acgtggaaatcttttgt 360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 18873 - 18785
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagt 90  Q
    ||||| ||||||| |||| |||||||||||||||| |||| ||||| | |||||||| ||||||| |||| |||||||| |||||||||    
T  18873 tgttcttgcgtctttttcccacatttctgttttgaattggcctttgctgtaaacatgaaagttgtagatatttgtgttagctttccagt 18785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 28611 - 28540
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataatt 74  Q
    |||| ||||||  ||||||  ||||||||||||| |||| ||||||| |||||||| ||||||| |||||||    
T  28611 gttcttgcgtccttttcacctatttctgttttgaattggactttggtgtaaacatgaaagttgtagataatt 28540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 23561 - 23649
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgac 104  Q
    |||||| | |||||||||||| |||| ||||||| |||||||| ||||||| ||||||||||||| ||||||||| |  ||||||||||    
T  23561 tttcacccttttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgtgttagctttccagtggctttggtttgac 23649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 174505 - 174601
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| |||||||| |||| | ||||||| |  |||||||||| |||||||    
T  174505 tttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattgcgttagccttccagtggctttggtttgacttgaaaat 174601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 11562 - 11649
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagt 90  Q
    |||| ||||||| | ||||||||||||||||||| |||| ||||||| |||||||| |||||   ||||||||||||| |||||||||    
T  11562 gttcttgcgtctttgtcacacatttctgttttgaattggcctttggtgtaaacatgaaagtttaagataattgtgttagctttccagt 11649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 9750 - 9663
Alignment:
Q  1 gtgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||||| || |||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  9750 gtgttcttgtgtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattttgttagctttcca 9663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 41049 - 40938
Alignment:
Q  1 gtgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtt 100  Q
    |||||| ||||||| ||||| || |||||||||||| || | ||||||| |||||||| ||||||| ||||||||||||| |||| |||| |  | ||||    
T  41049 gtgttcttgcgtctttttcatacgtttctgttttgaattagcctttggtgtaaacatgaaagttgtagataattgtgttagctttacagtggcatcggtt 40950  T
Q  101 tgacgtgaaaat 112  Q
    |||| |||||||    
T  40949 tgacttgaaaat 40938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 706 - 620
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    ||||| ||||||| |||||||| ||||||||||||||||  |||| || |||||||| ||||||| ||||||| ||||| |||||||    
T  706 tgttcttgcgtctttttcacacgtttctgttttgagttgacctttagtgtaaacatgaaagttgtagataattttgttagctttcca 620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 2273 - 2163
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| ||||| |||||| |||| |||||||||||||||| || |||| ||||| || |||| |||||||||    || ||||    
T  2273 tgttcttgcgtctttttcacacgtttctcttttgaattggcctttggtataaacatgaaaattgtagataaatgagttagctttccagtgactttagttt 2174  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  2173 gacgtgaaaat 2163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 22134 - 22244
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||| ||| |||||||| |||||||||||| |||  ||||||| |||||||| || |||| |||||||| |||| ||||||||| |  |||||||    
T  22134 tgttcttgcatctttttcacacgtttctgttttgaattgacctttggtgtaaacatgaaaattgtagataattgagttagctttccagtggctttggttt 22233  T
Q  102 gacgtgaaaat 112  Q
     ||||||||||    
T  22234 cacgtgaaaat 22244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 106546 - 106656
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| |||||||||||| | || |||| || |||||||  ||||||| |||||||| |||| |||||||||    |||||||    
T  106546 tgttcttgcgtctttttcacacgtttctgttttgaataggcctttagtgtaaacattaaagttgtagataattgagttagctttccagtgaaattggttt 106645  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  106646 gacgtgaaaat 106656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 10272 - 10382
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||| | |||||||||||| || |  || ||| |||||||| ||||||| ||||||||||||| |||||||||||  |||||||    
T  10272 tgttcttgcgtctttttcacccgtttctgttttgaatttgctttaggtgtaaacatgaaagttgtagataattgtgttagctttccagtagctttggttt 10371  T
Q  102 gacgtgaaaat 112  Q
     || |||||||    
T  10372 aacttgaaaat 10382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 3671 - 3586
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| ||||||| |||||||| |||||||||||| ||||  |||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  3671 gttcttgcgtctttttcacacgtttctgttttgaattggcatttggtgtaaacatgaaagttgtagataattttgttagctttcca 3586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 65332 - 65433
Alignment:
Q  10 cgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaa 109  Q
    ||||| |||||||| |||||||||||| || | |||| || |||||||| ||||||| |||||||||||||  |||||||| |  |||||||||| ||||    
T  65332 cgtctttttcacacgtttctgttttgaatttgcctttagtgtaaacatgaaagttgtagataattgtgttagatttccagtggctttggtttgacttgaa 65431  T
Q  110 aa 111  Q
    ||    
T  65432 aa 65433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 11690 - 11778
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagt 90  Q
    ||||| ||||||| |||| ||| |||||||||||| |||| ||||| | |||||||| ||||||| |||||||||||||  ||||||||    
T  11690 tgttcttgcgtctttttctcacgtttctgttttgaattggcctttgatgtaaacatgaaagttgtagataattgtgttagatttccagt 11778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1783 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold1783
Description:

Target: scaffold1783; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 959 - 880
Alignment:
Q  1 gtgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgtta 80  Q
    |||||| ||||||| || ||||| |||||||||||| |||| ||||||| |||||||| ||||||| ||||||| |||||    
T  959 gtgttcttgcgtcttttacacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgtagataattttgtta 880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1766 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold1766
Description:

Target: scaffold1766; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 1039 - 1147
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| ||| |||| |||||||||||| |||| ||||||| |||||||| |||||||  ||| ||| |||| ||||||||| |  || ||||    
T  1039 tgttcttgcgtctttttaacacgtttctgttttgaattggcctttggtgtaaacatgaaagttgt--atagttgagttagctttccagtggctttagttt 1136  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  1137 gacgtgaaaat 1147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 4)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 111
Target Start/End: Complemental strand, 7914 - 7819
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaa 111  Q
    |||||||  |||||||||||| |||| |||| ||  ||||||| ||||||| ||||||||||||| ||||||||| |  ||||||||| |||||||    
T  7914 tttcacatgtttctgttttgaattggccttttgtgcaaacatgaaagttgtagataattgtgttagctttccagtggctttggtttgatgtgaaaa 7819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 111
Target Start/End: Complemental strand, 14545 - 14450
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaa 111  Q
    |||||||  |||||||||||| |||| |||| ||  ||||||| ||||||| ||||||||||||| ||||||||| |  ||||||||| |||||||    
T  14545 tttcacatgtttctgttttgaattggccttttgtgcaaacatgaaagttgtagataattgtgttagctttccagtggctttggtttgatgtgaaaa 14450  T

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Target: scaffold0104; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 26629 - 26549
Alignment:
Q  8 tgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    ||||||| ||| | || |||||||||||| |||  ||||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  26629 tgcgtcttttttatacgtttctgttttgaattgacctttggtgtaaacatgaaagttgtagataattttgttagctttcca 26549  T

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Target: scaffold0104; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 28011 - 27931
Alignment:
Q  8 tgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    ||||||| ||| | || |||||||||||| |||  ||||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  28011 tgcgtcttttttatacgtttctgttttgaattgacctttggtgtaaacatgaaagttgtagataattttgttagctttcca 27931  T

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Target: scaffold0577 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 6156 - 6078
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgtta 80  Q
    ||||| ||||||| |||||||| |||||||||||| |||  ||||||| |||||||| ||||| | |||||||||||||    
T  6156 tgttcttgcgtctttttcacacgtttctgttttgaattgacctttggtgtaaacatgaaagttttagataattgtgtta 6078  T

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Target: scaffold0379 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 10409 - 10299
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||| ||| |||||||| |||||||||||| |||  ||||||| |||||||| ||||| | || ||||||||||  |||| ||| || |||||||    
T  10409 tgttcttgcatctgtttcacacttttctgttttgaattgtcctttggtgtaaacatgaaagttttagaaaattgtgttagatttcaagtggttttggttt 10310  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  10309 gacttgaaaat 10299  T

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Target: scaffold0151 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 9764 - 9654
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||  |||||||  |||||||||||| ||||  |||||| |||||||| ||||||| ||||||| ||||| ||||||| | |  |||||||    
T  9764 tgttcttgcgtcattttcacatgtttctgttttgaattgggttttggtgtaaacatgaaagttgtagataattttgttagctttccaatggctttggttt 9665  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  9664 gacttgaaaat 9654  T

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Target: scaffold0029 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 11938 - 11852
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    ||||| ||||||| |||||||  |||||||||||| || | ||||||| |||||||| ||||||| ||||||| ||||| |||||||    
T  11938 tgttcttgcgtctttttcacatgtttctgttttgaattagcctttggtgtaaacatgaaagttgtagataattttgttagctttcca 11852  T

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Target: scaffold0018 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 21361 - 21251
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||| ||| |||||||| |||||||||||| || | ||||||| |||||||| || |||| | |||||| ||||  |||||||| |  |||||||    
T  21361 tgttcttgcatctttttcacacgtttctgttttgaattagcctttggtgtaaacatgaaaattgtaggtaattgagttagatttccagtggctttggttt 21262  T
Q  102 gacgtgaaaat 112  Q
    |||||||||||    
T  21261 gacgtgaaaat 21251  T

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Target: scaffold0334 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 216 - 139
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| ||||| || |||||||||||| |||| ||||||| |||||||| ||||| | ||||||| |||||||||||||    
T  216 gtctttttcaaacgtttctgttttgaattggcctttggtgtaaacatgaaagttttagataattttgttatctttcca 139  T

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Target: scaffold0334; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 1794 - 1711
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatcttt 85  Q
    ||||| ||| ||| |||||||| |||||||||||| |||  ||||||| |||||||| ||||| | ||||||| ||||| ||||    
T  1794 tgttcttgcatctttttcacacgtttctgttttgaattgacctttggtgtaaacatgaaagttttagataattttgttagcttt 1711  T

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Target: scaffold0317 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 13144 - 13225
Alignment:
Q  31 ttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    |||||| ||||  |||||| |||||||| ||||| | ||||||||||||| ||||||||| || |||||||||| |||||||    
T  13144 ttttgaattggcttttggtgtaaacatgaaagttttagataattgtgttagctttccagtggttttggtttgacttgaaaat 13225  T

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Target: scaffold0293 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 19603 - 19688
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||| ||||||| |||||| | |||||||||||| |||| ||||||| ||| |||| || |||| ||||||||||||| |||||||    
T  19603 gttcttgcgtctttttcacgcgtttctgttttgaattggcctttggtgtaagcatgaaaattgtagataattgtgttagctttcca 19688  T

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Target: scaffold0011 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 126440 - 126347
Alignment:
Q  19 cacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    ||||| |||||||||||| |||| ||||| | |||||||  ||||||| |||||||| |||| ||||||||| |  ||||||| ||||||||||    
T  126440 cacacgtttctgttttgaattggcctttgatgtaaacataaaagttgtagataattgagttagctttccagttgctttggtttaacgtgaaaat 126347  T

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Target: scaffold0011; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 33162 - 33084
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgtta 80  Q
    ||||| || |||| |||||||| ||||| |||||| |||| |||||||  ||||||| ||||||| |||||||||||||    
T  33162 tgttcttgtgtctttttcacacgtttctattttgaattggcctttggtggaaacatgaaagttgtagataattgtgtta 33084  T

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Target: scaffold0695 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0695
Description:

Target: scaffold0695; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 6595 - 6507
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagt 90  Q
    ||||| ||| ||| ||||| || |||||||||||| || | ||||||| |||||||| ||||||  ||||||||||||| |||||||||    
T  6595 tgttcttgcatctttttcatacgtttctgttttgaattagcctttggtgtaaacatgaaagttgcagataattgtgttagctttccagt 6507  T

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Target: scaffold0113 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 34927 - 34859
Alignment:
Q  44 tttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    |||||| |||||||| ||||||| ||||||||||||| ||||||||| |  |||||||||| |||||||    
T  34927 tttggtgtaaacatgaaagttgtagataattgtgttagctttccagtggctttggtttgacttgaaaat 34859  T

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Target: scaffold0632 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 874 - 791
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatcttt 85  Q
    ||||| ||||||| |||||| | ||| ||||| || |||| ||||||| |||||||| ||||||| ||||||||||||| ||||    
T  874 tgttcttgcgtctttttcacccgtttttgtttcgaattggcctttggtgtaaacatgaaagttgtagataattgtgttagcttt 791  T

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Target: scaffold0266 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 859 - 796
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataatt 74  Q
    |||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||||| |||||||    
T  859 gtctttttcacacgtttctgttttgaattggactttggtgtaaacatgaaagttgtagataatt 796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 111
Target Start/End: Original strand, 1466 - 1561
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaa 111  Q
    |||||| | |||||||||||| || || || ||| |||| ||| ||||||| |||||||| |||||||||||||| |  |||||||||| ||||||    
T  1466 tttcacccttttctgttttgaatttgttttcggtgtaaaaatggaagttgtagataattgagttatctttccagtggctttggtttgacttgaaaa 1561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 90
Target Start/End: Complemental strand, 27967 - 27921
Alignment:
Q  44 tttggtataaacatgtaagttgttgataattgtgttatctttccagt 90  Q
    ||||||||||||||| ||||| | ||||||||||||| |||||||||    
T  27967 tttggtataaacatgaaagttttagataattgtgttagctttccagt 27921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2015 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold2015
Description:

Target: scaffold2015; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 26 - 112
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||| | | |||||| |||| || ||||||| ||||| |||||||    
T  26 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttgatgtgaacatgaaagtcgtagataattttgttagctttcca 112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 2596 - 2518
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgtta 80  Q
    ||||| ||||||  |||||||| |||||||||||| |||| |||| || |||||||| ||||||| ||||||| |||||    
T  2596 tgttcttgcgtccttttcacacgtttctgttttgaattggcctttagtgtaaacatgaaagttgtagataattttgtta 2518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 22737 - 22627
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggttt 101  Q
    ||||| ||||||| |||||||| ||| ||||| || || | ||||||  |||||||| || |||| ||||||||||||| ||||||||| |  | |||||    
T  22737 tgttcttgcgtctttttcacacgtttgtgtttggaattagcctttggggtaaacatgaaaattgtagataattgtgttagctttccagtggcgtcggttt 22638  T
Q  102 gacgtgaaaat 112  Q
    ||| |||||||    
T  22637 gacttgaaaat 22627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 112
Target Start/End: Complemental strand, 11353 - 11296
Alignment:
Q  55 catgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    |||| ||||||| ||||||||||||||||||||||| |  |||||||||| |||||||    
T  11353 catgaaagttgtagataattgtgttatctttccagtggctttggtttgacttgaaaat 11296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 18988 - 19097
Alignment:
Q  3 gttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttg 102  Q
    |||| ||||||| |||| ||| |||||||||||| |||| || |||| |||||||| ||||| | ||||||| ||||| |||| || | |  ||||||||    
T  18988 gttcttgcgtctttttctcacgtttctgttttgaattggcctgtggtgtaaacatgaaagttttagataattttgttagctttacaatggctttggtttg 19087  T
Q  103 acgtgaaaat 112  Q
    || |||||||    
T  19088 acttgaaaat 19097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 5669 - 5757
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagt 90  Q
    ||||| ||||||| ||  |||| |||||||||||| || |  | |||| |||||||| ||||||| ||||||||||||| |||||||||    
T  5669 tgttcttgcgtcttttggacacgtttctgttttgaattagcatatggtgtaaacatgaaagttgtagataattgtgttagctttccagt 5757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 2410 - 2506
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    |||||| | |||||||||||| || |  |||||| |||||||| ||||| | ||||||||||||| ||||||||| |  ||| |||||| |||||||    
T  2410 tttcacccttttctgttttgaatttgcttttggtgtaaacatgaaagttttagataattgtgttagctttccagttgctttgatttgacttgaaaat 2506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 39794 - 39722
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||||||| |||||||||||| |||| ||||||| |||||||| ||||| | ||||||| | ||| |||||||    
T  39794 tttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttttagataatttttttagctttcca 39722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1404 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1404
Description:

Target: scaffold1404; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 86
Target Start/End: Complemental strand, 1509 - 1434
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttc 86  Q
    |||| |||||||| |||||||||||| |||| ||| ||| |||||||| ||||| | ||||||| ||||| |||||    
T  1509 gtctttttcacacgtttctgttttgaattggccttcggtgtaaacatgaaagttttagataattttgttagctttc 1434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0672 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 7898 - 8009
Alignment:
Q  1 gtgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtt 100  Q
    |||||| ||||||| ||  |||| |||||||||||| |||  |||| || |||||||  ||||||| ||||||| ||||| ||||||| | |  ||||||    
T  7898 gtgttcttgcgtcttttagacacgtttctgttttgaattgacctttcgtgtaaacattaaagttgtagataattttgttagctttccaatggctttggtt 7997  T
Q  101 tgacgtgaaaat 112  Q
    |||| |||||||    
T  7998 tgacttgaaaat 8009  T

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Target: scaffold0607 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 3392 - 3329
Alignment:
Q  25 tttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||||||||||| |||| ||||||| |||||||| ||||| | ||||||| ||||| |||||||    
T  3392 tttctgttttgaattggcctttggtgtaaacatgaaagttttagataattttgttagctttcca 3329  T

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Target: scaffold0231 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 113
Target Start/End: Original strand, 18049 - 18108
Alignment:
Q  54 acatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaatc 113  Q
    ||||| ||||||| ||||||||||||| ||||||||| |  |||||||||| ||||||||    
T  18049 acatgaaagttgtagataattgtgttagctttccagtggatttggtttgacttgaaaatc 18108  T

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Target: scaffold0116 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 112
Target Start/End: Original strand, 35937 - 36024
Alignment:
Q  25 tttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    |||||||||||| || |  |||||| ||||| || ||||||| |||||||| |||| ||||||||| |  |||||||||| |||||||    
T  35937 tttctgttttgaatttgcttttggtgtaaacgtgaaagttgtagataattgagttagctttccagtggctttggtttgacttgaaaat 36024  T

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Target: scaffold0063 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 39279 - 39338
Alignment:
Q  29 tgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttcca 88  Q
    |||||||| || | ||||||| |||||||| ||||||| ||||||||||||| |||||||    
T  39279 tgttttgaattagcctttggtgtaaacatgaaagttgtagataattgtgttagctttcca 39338  T

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Target: scaffold0057 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 90
Target Start/End: Original strand, 70188 - 70259
Alignment:
Q  19 cacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagt 90  Q
    ||||| |||||||||||| |||| ||||| | |||||| | ||||||| | ||||||||||| |||||||||    
T  70188 cacacgtttctgttttgaattggcctttgatgtaaacaagaaagttgtaggtaattgtgttagctttccagt 70259  T

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Target: scaffold0035 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 110040 - 110103
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataatt 74  Q
    |||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||| | |||||||    
T  110040 gtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttttagataatt 110103  T

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Target: scaffold0035; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 118541 - 118604
Alignment:
Q  11 gtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataatt 74  Q
    |||| |||||||| |||||||||||| |||| ||||||| |||||||| ||||| | |||||||    
T  118541 gtctttttcacacgtttctgttttgaattggcctttggtgtaaacatgaaagttttagataatt 118604  T

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Target: scaffold1164 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 1039 - 969
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttc 86  Q
    |||||| |||||| ||||||| ||||| ||| || |||||||| ||||| | ||||||||||||| |||||    
T  1039 tttcacccatttccgttttgaattggtttttcgtgtaaacatgaaagttttagataattgtgttagctttc 969  T

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Target: scaffold0335 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 6176 - 6246
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttc 86  Q
    |||||| | |||||||||||| |||| ||||||| |||||||| ||||| | ||||||| ||||| |||||    
T  6176 tttcactcgtttctgttttgaattggcctttggtgtaaacatgaaagttatagataattatgttagctttc 6246  T

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Target: scaffold0019 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 33931 - 33869
Alignment:
Q  18 tcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgtta 80  Q
    |||||| |||||||||||| |||| ||||||| |||||||| ||||| | ||||||| |||||    
T  33931 tcacacgtttctgttttgaattggactttggtgtaaacatggaagttttagataattttgtta 33869  T

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Target: scaffold1278 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1278
Description:

Target: scaffold1278; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 1156 - 1084
Alignment:
Q  8 tgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgtta 80  Q
    |||||||  |||||||||||||| ||||| ||||  |||||| |||||||| ||||| |  ||||||||||||    
T  1156 tgcgtcttcttcacacatttctgctttgaattggcgtttggtgtaaacatgaaagttttatataattgtgtta 1084  T

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Target: scaffold0516 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 7977 - 8073
Alignment:
Q  16 tttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagtagtcttggtttgacgtgaaaat 112  Q
    |||||||| ||| |||||| | |||| ||||| | |||||||| ||  ||| |||||||||||||  |||||||| |  |||||||||| |||||||    
T  7977 tttcacacgtttttgttttaaattggcctttgatgtaaacatgaaaactgtagataattgtgttagatttccagtggctttggtttgacttgaaaat 8073  T

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Target: scaffold0385 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 53 - 1
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaa 54  Q
    ||||| ||||||| |||||||| |||||||||||| |||| ||||||| ||||    
T  53 tgttcttgcgtctttttcacacgtttctgttttgaattggcctttggtgtaaa 1  T

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Target: scaffold0203 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 18469 - 18557
Alignment:
Q  2 tgttcctgcgtctatttcacacatttctgttttgagttggtctttggtataaacatgtaagttgttgataattgtgttatctttccagt 90  Q
    ||||| ||||||| |||||||| |||||||||||| || | ||||||| ||||||   |||| || || |||||||||| |||| ||||    
T  18469 tgttcttgcgtctttttcacacgtttctgttttgaattagcctttggtgtaaacaataaagtcgtagacaattgtgttagctttacagt 18557  T

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