View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8208A_low_341 (Length: 235)

Name: NF8208A_low_341
Description: NF8208A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8208A_low_341
NF8208A_low_341
[»] chr3 (49 HSPs)
chr3 (8-235)||(16626932-16627158)
chr3 (8-235)||(18529999-18530226)
chr3 (20-231)||(15893139-15893350)
chr3 (9-205)||(8295578-8295774)
chr3 (9-205)||(8301723-8301919)
chr3 (9-205)||(4797112-4797308)
chr3 (9-205)||(15741541-15741737)
chr3 (9-205)||(18050865-18051061)
chr3 (9-205)||(29149214-29149410)
chr3 (9-199)||(4721234-4721424)
chr3 (9-199)||(35880369-35880559)
chr3 (9-199)||(18330277-18330467)
chr3 (9-199)||(6191919-6192109)
chr3 (93-199)||(5466672-5466778)
chr3 (9-199)||(8211344-8211534)
chr3 (9-199)||(18277517-18277707)
chr3 (9-199)||(18292818-18293008)
chr3 (9-199)||(18308119-18308309)
chr3 (20-199)||(10395750-10395929)
chr3 (92-199)||(18224877-18224984)
chr3 (60-199)||(22871339-22871478)
chr3 (60-199)||(22886398-22886537)
chr3 (69-199)||(5596831-5596961)
chr3 (9-199)||(7072815-7073005)
chr3 (9-199)||(28116422-28116612)
chr3 (9-199)||(47023056-47023246)
chr3 (92-193)||(4347155-4347256)
chr3 (92-181)||(17985439-17985528)
chr3 (92-193)||(28020964-28021065)
chr3 (92-187)||(5013398-5013493)
chr3 (92-199)||(6542939-6543046)
chr3 (99-205)||(20065739-20065845)
chr3 (9-181)||(21674296-21674468)
chr3 (93-181)||(28338989-28339077)
chr3 (93-181)||(31964956-31965044)
chr3 (93-181)||(50134554-50134642)
chr3 (60-199)||(18242381-18242520)
chr3 (60-199)||(20577327-20577466)
chr3 (93-199)||(4416603-4416709)
chr3 (57-187)||(7996213-7996343)
chr3 (57-187)||(10642721-10642851)
chr3 (77-199)||(36997554-36997676)
chr3 (77-199)||(51781682-51781804)
chr3 (96-181)||(5609805-5609890)
chr3 (60-199)||(11110826-11110965)
chr3 (77-199)||(24327830-24327952)
chr3 (123-199)||(29665450-29665526)
chr3 (123-199)||(51796817-51796893)
chr3 (60-199)||(48465569-48465708)
[»] chr2 (36 HSPs)
chr2 (8-235)||(19456795-19457022)
chr2 (8-231)||(21703542-21703765)
chr2 (20-231)||(27434825-27435036)
chr2 (8-190)||(27392630-27392812)
chr2 (9-205)||(23128973-23129169)
chr2 (9-205)||(28881852-28882048)
chr2 (9-205)||(20837556-20837752)
chr2 (9-205)||(12655180-12655376)
chr2 (9-193)||(37374799-37374983)
chr2 (60-199)||(261178-261317)
chr2 (92-199)||(12717018-12717125)
chr2 (93-199)||(21677595-21677701)
chr2 (9-199)||(34279087-34279277)
chr2 (60-199)||(13936957-13937096)
chr2 (92-199)||(31876002-31876109)
chr2 (92-199)||(34861401-34861508)
chr2 (92-199)||(37686322-37686429)
chr2 (92-199)||(37701587-37701694)
chr2 (92-199)||(39889783-39889890)
chr2 (92-181)||(16829769-16829858)
chr2 (92-181)||(16891623-16891712)
chr2 (93-181)||(22926459-22926547)
chr2 (60-199)||(12586490-12586629)
chr2 (92-199)||(34286075-34286182)
chr2 (92-199)||(34291135-34291242)
chr2 (92-199)||(37925214-37925321)
chr2 (99-199)||(11635602-11635702)
chr2 (99-199)||(11641791-11641891)
chr2 (60-199)||(9350407-9350546)
chr2 (60-199)||(27776896-27777035)
chr2 (60-199)||(27803381-27803520)
chr2 (60-199)||(27816663-27816802)
chr2 (60-199)||(40233188-40233327)
chr2 (77-199)||(19416912-19417034)
chr2 (99-187)||(32049526-32049614)
chr2 (60-172)||(39052268-39052380)
[»] scaffold0124 (2 HSPs)
scaffold0124 (8-231)||(20053-20276)
scaffold0124 (9-205)||(30095-30291)
[»] chr4 (23 HSPs)
chr4 (8-235)||(15227529-15227756)
chr4 (10-235)||(15285313-15285538)
chr4 (8-231)||(1899916-1900139)
chr4 (8-209)||(14235939-14236140)
chr4 (9-205)||(14664675-14664871)
chr4 (8-182)||(15391774-15391948)
chr4 (9-205)||(17013657-17013853)
chr4 (9-199)||(24592735-24592925)
chr4 (9-199)||(14763728-14763918)
chr4 (9-199)||(36344936-36345126)
chr4 (92-199)||(31126942-31127049)
chr4 (9-199)||(6569510-6569700)
chr4 (9-199)||(14098198-14098388)
chr4 (9-199)||(19372918-19373108)
chr4 (92-187)||(27163753-27163848)
chr4 (92-199)||(30753482-30753589)
chr4 (99-199)||(54833137-54833237)
chr4 (92-199)||(40106062-40106169)
chr4 (99-181)||(5005617-5005699)
chr4 (77-199)||(18801046-18801168)
chr4 (77-199)||(33674234-33674356)
chr4 (92-187)||(21969441-21969536)
chr4 (123-199)||(39850394-39850470)
[»] chr1 (6 HSPs)
chr1 (8-235)||(20460748-20460975)
chr1 (8-209)||(16208439-16208640)
chr1 (92-205)||(41793726-41793839)
chr1 (60-199)||(10962362-10962501)
chr1 (60-199)||(51637910-51638049)
chr1 (77-199)||(28584690-28584812)
[»] chr7 (27 HSPs)
chr7 (20-231)||(16040980-16041191)
chr7 (8-232)||(16450272-16450496)
chr7 (9-205)||(16518720-16518916)
chr7 (9-205)||(16503684-16503880)
chr7 (9-205)||(2154216-2154412)
chr7 (9-205)||(10917169-10917365)
chr7 (9-198)||(11425087-11425276)
chr7 (9-199)||(5127635-5127825)
chr7 (9-199)||(5147650-5147840)
chr7 (9-199)||(31124554-31124744)
chr7 (57-199)||(45387034-45387176)
chr7 (92-199)||(26275404-26275511)
chr7 (93-199)||(4145433-4145539)
chr7 (9-199)||(24592851-24593041)
chr7 (94-199)||(26320179-26320284)
chr7 (92-199)||(3445020-3445127)
chr7 (92-199)||(9618377-9618484)
chr7 (9-199)||(16736770-16736960)
chr7 (9-199)||(16751824-16752014)
chr7 (9-199)||(17523175-17523365)
chr7 (9-199)||(17529850-17530040)
chr7 (77-199)||(11441271-11441393)
chr7 (92-199)||(26486054-26486161)
chr7 (92-199)||(31564709-31564816)
chr7 (92-199)||(26670224-26670331)
chr7 (123-193)||(26435014-26435084)
chr7 (60-199)||(26538183-26538322)
[»] chr5 (45 HSPs)
chr5 (7-231)||(23891855-23892079)
chr5 (8-231)||(25198682-25198905)
chr5 (9-203)||(24951761-24951955)
chr5 (9-205)||(24688472-24688668)
chr5 (9-205)||(30934287-30934483)
chr5 (9-205)||(23752765-23752961)
chr5 (9-205)||(23718303-23718500)
chr5 (9-205)||(11549005-11549201)
chr5 (10-205)||(22999429-22999624)
chr5 (9-199)||(33777138-33777328)
chr5 (9-199)||(15659081-15659271)
chr5 (21-199)||(40473873-40474051)
chr5 (92-205)||(2510785-2510898)
chr5 (92-199)||(9317185-9317292)
chr5 (92-199)||(12131889-12131996)
chr5 (92-199)||(24681171-24681278)
chr5 (92-199)||(24723698-24723805)
chr5 (92-199)||(37771320-37771427)
chr5 (93-199)||(8665796-8665902)
chr5 (92-199)||(6874036-6874143)
chr5 (92-187)||(18375745-18375840)
chr5 (92-187)||(30151752-30151847)
chr5 (92-187)||(30168203-30168298)
chr5 (92-199)||(31826740-31826847)
chr5 (92-199)||(37671813-37671920)
chr5 (90-193)||(41674441-41674544)
chr5 (9-199)||(5637561-5637751)
chr5 (57-199)||(15759178-15759320)
chr5 (21-199)||(37358976-37359154)
chr5 (92-193)||(9548870-9548971)
chr5 (92-181)||(33516090-33516179)
chr5 (60-199)||(18501069-18501208)
chr5 (172-231)||(22888287-22888346)
chr5 (92-199)||(26480126-26480233)
chr5 (92-199)||(31431162-31431269)
chr5 (60-199)||(37754670-37754809)
chr5 (9-199)||(3789177-3789367)
chr5 (92-205)||(32599784-32599897)
chr5 (92-205)||(34616255-34616368)
chr5 (92-198)||(28960120-28960226)
chr5 (9-199)||(43077900-43078090)
chr5 (92-199)||(13325165-13325272)
chr5 (77-187)||(28648945-28649055)
chr5 (77-199)||(29967387-29967509)
chr5 (77-199)||(30029134-30029256)
[»] chr8 (19 HSPs)
chr8 (9-231)||(16283091-16283313)
chr8 (9-205)||(19687740-19687936)
chr8 (8-202)||(22081252-22081446)
chr8 (9-205)||(16277196-16277392)
chr8 (9-205)||(14557269-14557465)
chr8 (9-205)||(2137636-2137832)
chr8 (9-205)||(27609282-27609478)
chr8 (9-199)||(18710228-18710418)
chr8 (9-199)||(19674080-19674270)
chr8 (93-205)||(31354250-31354362)
chr8 (92-199)||(19208743-19208850)
chr8 (77-199)||(31490133-31490255)
chr8 (92-181)||(28362356-28362445)
chr8 (99-199)||(19286197-19286297)
chr8 (21-180)||(3329921-3330080)
chr8 (21-199)||(29828967-29829145)
chr8 (60-199)||(19518526-19518665)
chr8 (77-199)||(33258433-33258555)
chr8 (9-199)||(12093116-12093306)
[»] scaffold0089 (3 HSPs)
scaffold0089 (9-231)||(29405-29627)
scaffold0089 (9-205)||(40487-40683)
scaffold0089 (9-205)||(47403-47599)
[»] scaffold0109 (1 HSPs)
scaffold0109 (8-200)||(21208-21400)
[»] scaffold0143 (1 HSPs)
scaffold0143 (9-205)||(26934-27130)
[»] chr6 (35 HSPs)
chr6 (9-205)||(13299312-13299508)
chr6 (9-205)||(22935238-22935434)
chr6 (9-205)||(23857683-23857879)
chr6 (9-205)||(24863356-24863552)
chr6 (8-200)||(20160345-20160534)
chr6 (8-200)||(22172297-22172486)
chr6 (9-205)||(15424678-15424874)
chr6 (9-205)||(26988640-26988836)
chr6 (9-205)||(26999712-26999908)
chr6 (60-205)||(24304979-24305124)
chr6 (60-199)||(26918070-26918209)
chr6 (9-193)||(16749493-16749677)
chr6 (9-199)||(29549117-29549307)
chr6 (9-205)||(27044029-27044225)
chr6 (92-199)||(4525011-4525118)
chr6 (92-199)||(4757483-4757590)
chr6 (92-199)||(29572735-29572842)
chr6 (9-199)||(3695702-3695892)
chr6 (92-181)||(30558401-30558490)
chr6 (9-205)||(17024901-17025097)
chr6 (92-199)||(4772719-4772826)
chr6 (92-199)||(27007434-27007541)
chr6 (92-199)||(27484839-27484946)
chr6 (166-232)||(22477607-22477673)
chr6 (90-199)||(29501126-29501235)
chr6 (93-193)||(26778000-26778100)
chr6 (92-199)||(27360377-27360484)
chr6 (92-199)||(27450720-27450827)
chr6 (60-199)||(34463728-34463867)
chr6 (9-199)||(4546151-4546341)
chr6 (77-199)||(16944394-16944516)
chr6 (9-199)||(28207081-28207271)
chr6 (92-181)||(26116804-26116893)
chr6 (92-199)||(4724510-4724617)
chr6 (60-199)||(16673817-16673956)
[»] scaffold0029 (1 HSPs)
scaffold0029 (9-199)||(554-744)
[»] scaffold0336 (1 HSPs)
scaffold0336 (9-199)||(7874-8064)
[»] scaffold0099 (1 HSPs)
scaffold0099 (9-203)||(48568-48769)
[»] scaffold0350 (1 HSPs)
scaffold0350 (92-199)||(7663-7770)
[»] scaffold0144 (1 HSPs)
scaffold0144 (9-199)||(26626-26816)
[»] scaffold0237 (1 HSPs)
scaffold0237 (92-187)||(15366-15461)
[»] scaffold0159 (1 HSPs)
scaffold0159 (96-181)||(9508-9593)
[»] scaffold0038 (1 HSPs)
scaffold0038 (9-199)||(7579-7769)
[»] scaffold0415 (1 HSPs)
scaffold0415 (60-199)||(5682-5821)


Alignment Details
Target: chr3 (Bit Score: 188; Significance: 1e-102; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 8 - 235
Target Start/End: Complemental strand, 16627158 - 16626932
Alignment:
Q  8 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtac 107  Q
    |||||||| || |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  16627158 tgagatggtcaccatggggactcgcctagaagaagctatcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 16627059  T
Q  108 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgcccagt 207  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  16627058 ggtaacggtcatcataagaag-aagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 16626960  T
Q  208 tatttccgtcgtacccgtatgcgcaata 235  Q
    ||  |||||||||||||||||| |||||    
T  16626959 tacctccgtcgtacccgtatgcacaata 16626932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 8 - 235
Target Start/End: Original strand, 18529999 - 18530226
Alignment:
Q  8 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtac 107  Q
    |||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||| |||    
T  18529999 tgagatggtcaccatggggactcgtctagaagaagctgtcagagaaggcattattgtattcgagaaagttgaatcctctgtaaatgcatcaaagagatac 18530098  T
Q  108 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgcccagt 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||| || |||||||||||||||||||||    
T  18530099 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggaactagtcaatccatggctactgttacccctattaatgctgcccagt 18530198  T
Q  208 tatttccgtcgtacccgtatgcgcaata 235  Q
    ||  ||| ||||||||||||||||||||    
T  18530199 tacctccatcgtacccgtatgcgcaata 18530226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 20 - 231
Target Start/End: Complemental strand, 15893350 - 15893139
Alignment:
Q  20 catggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcat 119  Q
    |||||| |||||||| ||||||||| |||||||||| || ||||| ||||||| || ||||||||| |  |||||||||||||||||  ||||||| ||     
T  15893350 catgggaactcgtctggaagaagctgtcagagaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatagtaacggacac 15893251  T
Q  120 cataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgcccagttatttccgtcgt 219  Q
    || |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||| ||||| |||||||||||  |   ||||||||    
T  15893250 cacaagaagaaagaaacggaagtagggatggtgtctgccggagccggtcaatccatggctactgttgctcctatcaatgctgcccaaatgcctccgtcgt 15893151  T
Q  220 acccgtatgcgc 231  Q
    |||| |||||||    
T  15893150 acccatatgcgc 15893139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 205
Target Start/End: Original strand, 8295578 - 8295774
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| ||||||||  |||  || || || ||||| ||||||| || ||||||||| |  ||||||||||||||||| |    
T  8295578 gagatggtcaccatgggaactcgtctggaagaagccgtcaaggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 8295677  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgccca 205  Q
    |||| || || || |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||| ||||| ||||| |||||    
T  8295678 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtctgccggagccggtcaatccatggctactgttgctcctatcaatgcagccca 8295774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 205
Target Start/End: Complemental strand, 8301919 - 8301723
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| ||||||||  |||| ||||| || ||||| ||||||| || ||||||||| |  ||||| ||||||||||| |    
T  8301919 gagatggtcaccatgggaactcgtctggaagaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcgtcaaagaggtatg 8301820  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgccca 205  Q
    |||| || || || |||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||| | |||| ||||| |||||||||||    
T  8301819 gtaatggacaccacaagaagaaagaaacggaagtatggatggtgtctgccggagccggtcaatccatggctattgttgctcctatcaatgctgccca 8301723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 9 - 205
Target Start/End: Complemental strand, 4797308 - 4797112
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| ||||| || ||||| ||||||| || ||||||||| |  ||||||||||||||||| |    
T  4797308 gagatggtcaccatgggaacccgtctggaggaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 4797209  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgccca 205  Q
    |||| || || || |||||||||||||| |||||||||||||| || || |||||||||||||||||||||||| |||| ||||| ||||| |||||    
T  4797208 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 4797112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 9 - 205
Target Start/End: Complemental strand, 15741737 - 15741541
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| ||||||||  |||| || || || ||||| ||||||| || ||||||||| |  ||||||||||||||||| |    
T  15741737 gagatggtcaccatgggaactcgtctggaagaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 15741638  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgccca 205  Q
    | || || || || |||||||||||||| |||||||||||||| || || |||||||||||||||||||||||| |||| ||||| ||||| |||||    
T  15741637 gcaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 15741541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 9 - 205
Target Start/End: Original strand, 18050865 - 18051061
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| ||||| || ||||| ||||||| || ||||||||| |  ||||||||||||||||| |    
T  18050865 gagatggtcaccatgggaacccgtctggaggaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 18050964  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgccca 205  Q
    |||| || || || |||||||||||||| |||||||||||||| || || |||||||||||||||||||||||| |||| ||||| ||||| |||||    
T  18050965 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 18051061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 205
Target Start/End: Complemental strand, 29149410 - 29149214
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| ||||||| || ||||||||| |  |||||||| |||||||| |    
T  29149410 gagatggtcaccatgggaacccgtctggaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 29149311  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgccca 205  Q
    |||| || || || |||||||||||||| |||||||||||||| || || |||||||||||||||||||||||| |||| ||||| ||||| |||||    
T  29149310 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactattgctcctatcaatgcagccca 29149214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 4721234 - 4721424
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| ||||||| || ||||||||| |  |||||||| |||||||| |    
T  4721234 gagatggtcaccatgggaacccgtctggaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 4721333  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| |||||||||||||| || || |||||||||||||||||||||||| |||| ||||| |||||    
T  4721334 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgc 4721424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 35880369 - 35880559
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| ||||||| || ||||||||| |  |||||||| |||||||| |    
T  35880369 gagatggtcaccatgggaacccgtctggaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 35880468  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| |||||||||||||| || || |||||||||||||||||||||||| |||| ||||| |||||    
T  35880469 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgc 35880559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 18330277 - 18330467
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || |||||  |||||| || ||||||||| |  |||||||| |||||||| |    
T  18330277 gagatggtcaccatgggaacccgtctggaggaagccgtcagggatggaatcattgtgctcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 18330376  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| |||||||||||||| || || |||||||||||||||||||||||| |||| ||||| |||||    
T  18330377 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgc 18330467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 6191919 - 6192109
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| ||||||| || ||||||||| |  |||||||| |||||||| |    
T  6191919 gagatggtcaccatgggaacccgtctggaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 6192018  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| |||||| ||||||| || |  |||||||||||||||||||||||| |||| ||||| |||||    
T  6192019 gtaatggacaccacaagaagaaagaaacggaagtatggatggtgtcagttggagccggtcaatccatggctactgttgctcctatcaatgc 6192109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 5466672 - 5466778
Alignment:
Q  93 gcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgccccta 192  Q
    |||||||||||||| ||||| || || || |||||||||||||| ||||| |||||||| || ||||||||||||||||| ||||||||| |||| ||||    
T  5466672 gcatcaaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagccggagccggtcaatctatggctactgttgcaccta 5466771  T
Q  193 ttaatgc 199  Q
    | |||||    
T  5466772 tcaatgc 5466778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 8211344 - 8211534
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || |||| || ||| ||||| || | |||||| |||||||| |    
T  8211344 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgagtcctctgcgagtgcatcgaagaggtatg 8211443  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||||||||||||| |||| ||||| |||||    
T  8211444 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgc 8211534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 18277707 - 18277517
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| ||||||| || ||||||||| |  |||||||| |||||||| |    
T  18277707 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 18277608  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||| ||| |||| ||||| |||||    
T  18277607 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggccactgttgctcctatcaatgc 18277517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 18293008 - 18292818
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| ||||||| || ||||||||| |  |||||||| |||||||| |    
T  18293008 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 18292909  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||| ||| |||| ||||| |||||    
T  18292908 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggccactgttgctcctatcaatgc 18292818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 18308309 - 18308119
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| ||||||| || ||||||||| |  |||||||| |||||||| |    
T  18308309 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 18308210  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||| ||| |||| ||||| |||||    
T  18308209 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggccactgttgctcctatcaatgc 18308119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 199
Target Start/End: Original strand, 10395750 - 10395929
Alignment:
Q  20 catggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcat 119  Q
    |||||| || ||||| || |||||  |||| || || |||||||| || |||| || ||||||||| |  |||||||| ||||| || ||||| || ||     
T  10395750 catgggaacccgtcttgaggaagccgtcagggatggaattattgtgtttgagaaagctgaatcctctgtgaatgcatcgaagagatatggtaatggacac 10395849  T
Q  120 cataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    || |||||||||||||| ||||| |||||||| || || |||||||||||||||||||||||  |||| ||||| |||||    
T  10395850 cacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatccatggctaccgttgctcctatcaatgc 10395929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 92 - 199
Target Start/End: Original strand, 18224877 - 18224984
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccct 191  Q
    |||||| || ||||||||||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||| ||||||||| |||| |||    
T  18224877 tgcatcgaaaaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtatcagctggagccggtcaatcaatggctactgttgctcct 18224976  T
Q  192 attaatgc 199  Q
    || |||||    
T  18224977 atcaatgc 18224984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 199
Target Start/End: Complemental strand, 22871478 - 22871339
Alignment:
Q  60 attgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || |||| || ||||||||| || | |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  22871478 attgtgtttgagaaagctgaatcctctgcgagtgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 22871379  T
Q  160 gagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    ||||||||||||| ||||||||| |||| ||||| |||||    
T  22871378 gagccggtcaatctatggctactgttgcacctatcaatgc 22871339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 199
Target Start/End: Complemental strand, 22886537 - 22886398
Alignment:
Q  60 attgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || |||| || ||||||||| || | |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  22886537 attgtgtttgagaaagctgaatcctctgcgagtgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 22886438  T
Q  160 gagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    ||||||||||||| ||||||||| |||| ||||| |||||    
T  22886437 gagccggtcaatctatggctactgttgcacctatcaatgc 22886398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 69 - 199
Target Start/End: Complemental strand, 5596961 - 5596831
Alignment:
Q  69 gagacagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtc 168  Q
    |||| |||||||||||| || | |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || ||||||||||    
T  5596961 gagaaagttgaatcctctgcgagtgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtc 5596862  T
Q  169 aatccatggctactcttgcccctattaatgc 199  Q
    |||| ||||||||  |||| ||||| |||||    
T  5596861 aatcaatggctaccgttgctcctatcaatgc 5596831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 7072815 - 7073005
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || |||| || ||||||||| |  ||||| || |||||||| |    
T  7072815 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagaggtatg 7072914  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||| ||||||||||||||||| |||| ||||| |||||    
T  7072915 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccagtcaatccatggctactgttgctcctatcaatgc 7073005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 28116612 - 28116422
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || |||||||| || |||| || |||||| ||  | | |||||| |||||||| |    
T  28116612 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaattattgtgtttgagaaagctgaatcttctacgagtgcatcgaagaggtatg 28116513  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||||||||||||  |||| ||||| |||||    
T  28116512 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatccatggctaccgttgctcctatcaatgc 28116422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 47023056 - 47023246
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || |||| ||  |||||||| |  |||||||| |||||||| |    
T  47023056 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagccgaatcctctgtgaatgcatcgaagaggtatg 47023155  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||||||| |||| ||||| |||||    
T  47023156 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcctatcaatgc 47023246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 92 - 193
Target Start/End: Complemental strand, 4347256 - 4347155
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccct 191  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||||||||||||| |||| |||    
T  4347256 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatccatggctactgttgctcct 4347157  T
Q  192 at 193  Q
    ||    
T  4347156 at 4347155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 92 - 181
Target Start/End: Complemental strand, 17985528 - 17985439
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctac 181  Q
    ||||||||| ||||||||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||||||||||||    
T  17985528 tgcatcaaaaaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatccatggctac 17985439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 92 - 193
Target Start/End: Original strand, 28020964 - 28021065
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccct 191  Q
    ||||||||||||||| |||||||| || || |||||||| ||||| ||||| |||||||| || || |||||||| ||||||||||||||| |||| |||    
T  28020964 tgcatcaaagaggtatggtaacggacaccacaagaagaaggaaacggaagtggggatggtgtcagctggagccgggcaatccatggctactgttgctcct 28021063  T
Q  192 at 193  Q
    ||    
T  28021064 at 28021065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 187
Target Start/End: Original strand, 5013398 - 5013493
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgc 187  Q
    |||||| || ||||||||||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||| ||||||||| ||||    
T  5013398 tgcatcgaaaaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtatcagctggagccggtcaatcaatggctactgttgc 5013493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 6543046 - 6542939
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccct 191  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||||||| |||| |||    
T  6543046 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgcacct 6542947  T
Q  192 attaatgc 199  Q
    || |||||    
T  6542946 atcaatgc 6542939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 99 - 205
Target Start/End: Original strand, 20065739 - 20065845
Alignment:
Q  99 aagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatg 198  Q
    |||||||| ||||| || ||||| ||||||||||| || ||||| |||||||| || || |||||||||||||||||||| ||| |||| ||||| ||||    
T  20065739 aagaggtatggtaatggacatcacaagaagaaagatacggaagtggggatggtgtcagctggagccggtcaatccatggccactgttgctcctatcaatg 20065838  T
Q  199 ctgccca 205  Q
    | |||||    
T  20065839 cagccca 20065845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 9 - 181
Target Start/End: Original strand, 21674296 - 21674468
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || |||| || ||||||||| |  |||||||| ||||| || |    
T  21674296 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtgaatgcatcgaagagatatg 21674395  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctac 181  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||| ||||||||||    
T  21674396 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaacccatggctac 21674468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 93 - 181
Target Start/End: Original strand, 28338989 - 28339077
Alignment:
Q  93 gcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctac 181  Q
    ||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||||||||||||    
T  28338989 gcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcgggagccggtcaatccatggctac 28339077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 93 - 181
Target Start/End: Complemental strand, 31965044 - 31964956
Alignment:
Q  93 gcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctac 181  Q
    ||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||||||||||||    
T  31965044 gcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcgggagccggtcaatccatggctac 31964956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 93 - 181
Target Start/End: Complemental strand, 50134642 - 50134554
Alignment:
Q  93 gcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctac 181  Q
    ||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||||||||||||    
T  50134642 gcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcgggagccggtcaatccatggctac 50134554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 18242381 - 18242520
Alignment:
Q  60 attgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || |||| || ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || ||||    
T  18242381 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagccg 18242480  T
Q  160 gagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    ||||||||||||| ||||||||  |||| ||||| |||||    
T  18242481 gagccggtcaatcaatggctaccgttgctcctatcaatgc 18242520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 60 - 199
Target Start/End: Complemental strand, 20577466 - 20577327
Alignment:
Q  60 attgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || |||| || ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  20577466 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 20577367  T
Q  160 gagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    ||||||||||||| ||||||||| |||| ||||| |||||    
T  20577366 gagccggtcaatcaatggctactgttgctcctatcaatgc 20577327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 4416603 - 4416709
Alignment:
Q  93 gcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgccccta 192  Q
    ||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||| ||||| |||| ||||    
T  4416603 gcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatgactactgttgctccta 4416702  T
Q  193 ttaatgc 199  Q
    | |||||    
T  4416703 tcaatgc 4416709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 57 - 187
Target Start/End: Original strand, 7996213 - 7996343
Alignment:
Q  57 attattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctg 156  Q
    |||||||| || |||| || |||||| || || | ||| || |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || |    
T  7996213 attattgtgtttgagaaagctgaatcttctgcgagtgcctcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcag 7996312  T
Q  157 ccggagccggtcaatccatggctactcttgc 187  Q
    | |||||||||||||| ||||||||| ||||    
T  7996313 ctggagccggtcaatcaatggctactgttgc 7996343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 57 - 187
Target Start/End: Original strand, 10642721 - 10642851
Alignment:
Q  57 attattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctg 156  Q
    |||||||| || |||| || |||||| || || | ||| || |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || |    
T  10642721 attattgtgtttgagaaagctgaatcttctgcgagtgcctcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcag 10642820  T
Q  157 ccggagccggtcaatccatggctactcttgc 187  Q
    | |||||||||||||| ||||||||| ||||    
T  10642821 ctggagccggtcaatcaatggctactgttgc 10642851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 199
Target Start/End: Complemental strand, 36997676 - 36997554
Alignment:
Q  77 tgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatg 176  Q
    ||||||||| | |||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||    
T  36997676 tgaatcctctgtaaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatg 36997577  T
Q  177 gctactcttgcccctattaatgc 199  Q
    |||||  |||| ||||| |||||    
T  36997576 gctaccgttgctcctatcaatgc 36997554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 199
Target Start/End: Original strand, 51781682 - 51781804
Alignment:
Q  77 tgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatg 176  Q
    ||||||||| | |||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||    
T  51781682 tgaatcctctgtaaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatg 51781781  T
Q  177 gctactcttgcccctattaatgc 199  Q
    |||||  |||| ||||| |||||    
T  51781782 gctaccgttgctcctatcaatgc 51781804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 181
Target Start/End: Complemental strand, 5609890 - 5609805
Alignment:
Q  96 tcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctac 181  Q
    |||||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||||||||||||    
T  5609890 tcaaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcgggagccggtcaatccatggctac 5609805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 199
Target Start/End: Complemental strand, 11110965 - 11110826
Alignment:
Q  60 attgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || |||| || ||||||||| |  ||||| || ||||| || ||||| || || || |||||||| ||||| ||||| |||||||| || || |    
T  11110965 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaggaaacggaagtggggatggtgtcagctg 11110866  T
Q  160 gagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    ||||||||||||||||||||||  |||| ||||| |||||    
T  11110865 gagccggtcaatccatggctaccgttgctcctatcaatgc 11110826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 77 - 199
Target Start/End: Original strand, 24327830 - 24327952
Alignment:
Q  77 tgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatg 176  Q
    ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||| ||||| |||    
T  24327830 tgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccgggcaatcaatg 24327929  T
Q  177 gctactcttgcccctattaatgc 199  Q
    |||||| |||| ||||| |||||    
T  24327930 gctactgttgctcctatcaatgc 24327952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 199
Target Start/End: Complemental strand, 29665526 - 29665450
Alignment:
Q  123 aagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||||||  |||| ||||| |||||    
T  29665526 aagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctaccgttgctcctatcaatgc 29665450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 199
Target Start/End: Original strand, 51796817 - 51796893
Alignment:
Q  123 aagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||||||  |||| ||||| |||||    
T  51796817 aagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctaccgttgctcctatcaatgc 51796893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 48465569 - 48465708
Alignment:
Q  60 attgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || |||| || ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| || ||||| || || |    
T  48465569 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtgggaatggtgtcagctg 48465668  T
Q  160 gagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    ||||||||||||| || |||||  |||| ||||| |||||    
T  48465669 gagccggtcaatcaatagctaccgttgctcctatcaatgc 48465708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 188; Significance: 1e-102; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 8 - 235
Target Start/End: Complemental strand, 19457022 - 19456795
Alignment:
Q  8 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtac 107  Q
    |||||||| || |||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  19457022 tgagatggtcaccatggggactcgcctagaagaagctgtcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 19456923  T
Q  108 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgcccagt 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  19456922 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagctggtcaatccatggctactgttgcccctattaatgctgcccagt 19456823  T
Q  208 tatttccgtcgtacccgtatgcgcaata 235  Q
    ||  |||||||||||| |||||||||||    
T  19456822 tacctccgtcgtacccatatgcgcaata 19456795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 8 - 231
Target Start/End: Complemental strand, 21703765 - 21703542
Alignment:
Q  8 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtac 107  Q
    |||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||| |||    
T  21703765 tgagatggtcaccatggggactcgtctagaagaagctgtcagagaaggcattattgtattcgagaaagttgaatcctctgtaaatgcatcaaagagatac 21703666  T
Q  108 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgcccagt 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||    
T  21703665 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcctagt 21703566  T
Q  208 tatttccgtcgtacccgtatgcgc 231  Q
    ||  |||||||||||| |||||||    
T  21703565 tacctccgtcgtacccatatgcgc 21703542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 20 - 231
Target Start/End: Complemental strand, 27435036 - 27434825
Alignment:
Q  20 catggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcat 119  Q
    |||||| |||||||| ||||||||  |||||||||| || ||||| ||||| | || ||||||||| |  ||||||||||||||||| |||||||| ||     
T  27435036 catgggaactcgtctggaagaagccgtcagagaaggaatcattgtgttcgaaaaagctgaatcctctgtgaatgcatcaaagaggtatggtaacggacac 27434937  T
Q  120 cataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgcccagttatttccgtcgt 219  Q
    || |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||  |   ||||||||    
T  27434936 cacaagaagaaagaaacggaagtagggatggtgtctgccggagccggtcaatccatggctactgttgctcctattaatgctgcccaaatgcctccgtcgt 27434837  T
Q  220 acccgtatgcgc 231  Q
    |||| |||||||    
T  27434836 acccatatgcgc 27434825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 8 - 190
Target Start/End: Original strand, 27392630 - 27392812
Alignment:
Q  8 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtac 107  Q
    |||||||| || |||||| || ||  ||||||| ||| ||||||| ||||||||||| || |||| || ||||||||| ||||||||||||| || |||     
T  27392630 tgagatggtcaccatgggaacccgcttagaagaggctgtcagagacggcattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtat 27392729  T
Q  108 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccc 190  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||  |||||||| |||||||    
T  27392730 ggtaatggtcatcataagaagaaagagacagaagtagggatggtatctgccggaaccagtcaatctgtggctactgttgcccc 27392812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 205
Target Start/End: Complemental strand, 23129169 - 23128973
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| ||||| || ||||| ||||||| || ||||||||| |  ||||||||||||||||| |    
T  23129169 gagatggtcaccatgggaacccgtctggaggaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 23129070  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgccca 205  Q
    ||||||| || || |||||||||||||| |||||||||||||| || || |||||||||||||||||||||||| |||| ||||| ||||| |||||    
T  23129069 gtaacggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 23128973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 205
Target Start/End: Original strand, 28881852 - 28882048
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| ||||||||| |||| || || || ||||| ||||||| || ||||||||| |  ||||||||||||||||| |    
T  28881852 gagatggtcaccatgggaactcgtctggaagaagctgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 28881951  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgccca 205  Q
    |||| || || || |||||||||||||| ||| |||||||||| || || |||||||||||||||||||||||| |||| ||||| ||||| |||||    
T  28881952 gtaatggacaccacaagaagaaagaaacggaaatagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 28882048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 205
Target Start/End: Original strand, 20837556 - 20837752
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| || |||||  |||| ||||| || ||||| ||||||| || ||||||| | |  ||||||||||||||||| |    
T  20837556 gagatggtcaccatgggaactcgtctggaggaagccgtcagggaaggaatcattgtgttcgagaaagctgaatccactgtgaatgcatcaaagaggtatg 20837655  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgccca 205  Q
    |||| || || || |||||||||||||| |||||||| ||||| || | ||||||||||||||||||||||||| |||| ||||| ||||| |||||    
T  20837656 gtaatggacaccacaagaagaaagaaacggaagtaggaatggtgtcagtcggagccggtcaatccatggctactgttgctcctatcaatgcagccca 20837752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 205
Target Start/End: Original strand, 12655180 - 12655376
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| ||||| || ||||| ||||||| || |||| |||| |  ||||||||||||||||| |    
T  12655180 gagatggtcaccatgggaacccgtctggaggaagccgtcagggaaggaatcattgtgttcgagaaagctgaaccctctgtgaatgcatcaaagaggtatg 12655279  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgccca 205  Q
    |||| || || || |||||||||||||| |||||||| ||||| || | ||||||||||||||||||||||||| |||| ||||| ||||| |||||    
T  12655280 gtaatggacaccacaagaagaaagaaacggaagtaggaatggtgtcagtcggagccggtcaatccatggctactgttgctcctatcaatgcagccca 12655376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 9 - 193
Target Start/End: Original strand, 37374799 - 37374983
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| ||||||| || ||||||||| |  |||||||| |||||||| |    
T  37374799 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 37374898  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctat 193  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||||||| |||| |||||    
T  37374899 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcctat 37374983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 199
Target Start/End: Complemental strand, 261317 - 261178
Alignment:
Q  60 attgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || |||| || ||||||||| |  |||||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  261317 attgtgtttgagaaagctgaatcctctgtgaatgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 261218  T
Q  160 gagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    ||||||||||||| ||||||||| |||| ||||| |||||    
T  261217 gagccggtcaatcaatggctactgttgctcctatcaatgc 261178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 12717125 - 12717018
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccct 191  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||||||||||||| |||| |||    
T  12717125 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatccatggctactgttgcacct 12717026  T
Q  192 attaatgc 199  Q
    || |||||    
T  12717025 atcaatgc 12717018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 93 - 199
Target Start/End: Complemental strand, 21677701 - 21677595
Alignment:
Q  93 gcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgccccta 192  Q
    ||||| |||||||| ||||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||| ||||||||| |||| ||||    
T  21677701 gcatcgaagaggtatggtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctggagccggtcaatcaatggctactgttgctccta 21677602  T
Q  193 ttaatgc 199  Q
    | |||||    
T  21677601 tcaatgc 21677595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 34279087 - 34279277
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || |||| || ||||||||| |  ||| | || |||||||| |    
T  34279087 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtgaatacgtcgaagaggtatg 34279186  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||||||||||||| |||| ||||| |||||    
T  34279187 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcgggagccggtcaatccatggctactgttgctcctatcaatgc 34279277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 60 - 199
Target Start/End: Complemental strand, 13937096 - 13936957
Alignment:
Q  60 attgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || |||| || ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  13937096 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 13936997  T
Q  160 gagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    ||||||||||||||||||||||| |||| ||||| |||||    
T  13936996 gagccggtcaatccatggctactgttgctcctatcaatgc 13936957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 199
Target Start/End: Original strand, 31876002 - 31876109
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccct 191  Q
    |||||| || ||||||||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||||||| |||| |||    
T  31876002 tgcatcgaaaaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcct 31876101  T
Q  192 attaatgc 199  Q
    || |||||    
T  31876102 atcaatgc 31876109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 199
Target Start/End: Original strand, 34861401 - 34861508
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccct 191  Q
    |||||| || ||||||||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||||||| |||| |||    
T  34861401 tgcatcgaaaaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcct 34861500  T
Q  192 attaatgc 199  Q
    || |||||    
T  34861501 atcaatgc 34861508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 37686429 - 37686322
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccct 191  Q
    |||||| || ||||||||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||||||| |||| |||    
T  37686429 tgcatcgaaaaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcct 37686330  T
Q  192 attaatgc 199  Q
    || |||||    
T  37686329 atcaatgc 37686322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 37701694 - 37701587
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccct 191  Q
    |||||| || ||||||||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||||||| |||| |||    
T  37701694 tgcatcgaaaaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcct 37701595  T
Q  192 attaatgc 199  Q
    || |||||    
T  37701594 atcaatgc 37701587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 199
Target Start/End: Original strand, 39889783 - 39889890
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccct 191  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||||||||| ||| |||| |||    
T  39889783 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatccatggccactgttgctcct 39889882  T
Q  192 attaatgc 199  Q
    || |||||    
T  39889883 atcaatgc 39889890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 92 - 181
Target Start/End: Complemental strand, 16829858 - 16829769
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctac 181  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||||||||||||    
T  16829858 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaactgaagtggggatggtgtcagctggagccggtcaatccatggctac 16829769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 92 - 181
Target Start/End: Original strand, 16891623 - 16891712
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctac 181  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||||||||||||    
T  16891623 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaactgaagtggggatggtgtcagctggagccggtcaatccatggctac 16891712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 93 - 181
Target Start/End: Complemental strand, 22926547 - 22926459
Alignment:
Q  93 gcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctac 181  Q
    ||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||||||||||||    
T  22926547 gcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcgggagccggtcaatccatggctac 22926459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 12586490 - 12586629
Alignment:
Q  60 attgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || |||| || ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  12586490 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 12586589  T
Q  160 gagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    ||||||||||||||||| ||||| |||| ||||| |||||    
T  12586590 gagccggtcaatccatgactactgttgctcctatcaatgc 12586629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 92 - 199
Target Start/End: Original strand, 34286075 - 34286182
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccct 191  Q
    |||||| ||||| || ||||| || || || |||||||||||||| |||||||||||||| || |  |||||||||||||||||||| ||| |||| |||    
T  34286075 tgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcaggtggagccggtcaatccatggccactgttgctcct 34286174  T
Q  192 attaatgc 199  Q
    || |||||    
T  34286175 atcaatgc 34286182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 92 - 199
Target Start/End: Original strand, 34291135 - 34291242
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccct 191  Q
    |||||| ||||| || ||||| || || || |||||||||||||| |||||||||||||| || |  |||||||||||||||||||| ||| |||| |||    
T  34291135 tgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcaggtggagccggtcaatccatggccactgttgctcct 34291234  T
Q  192 attaatgc 199  Q
    || |||||    
T  34291235 atcaatgc 34291242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 92 - 199
Target Start/End: Original strand, 37925214 - 37925321
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccct 191  Q
    |||||| ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||||||| |||| |||    
T  37925214 tgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcct 37925313  T
Q  192 attaatgc 199  Q
    || |||||    
T  37925314 atcaatgc 37925321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 199
Target Start/End: Complemental strand, 11635702 - 11635602
Alignment:
Q  99 aagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatg 198  Q
    |||||||| ||||| || || || |||||||||||| | ||||| |||||||| || || |||||||||||||||||||||||  |||| ||||| ||||    
T  11635702 aagaggtatggtaatggacaccacaagaagaaagaagcggaagtggggatggtgtcagcaggagccggtcaatccatggctaccgttgctcctatcaatg 11635603  T
Q  199 c 199  Q
    |    
T  11635602 c 11635602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 199
Target Start/End: Complemental strand, 11641891 - 11641791
Alignment:
Q  99 aagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatg 198  Q
    |||||||| ||||| || || || |||||||||||| | ||||| |||||||| || || |||||||||||||||||||||||  |||| ||||| ||||    
T  11641891 aagaggtatggtaatggacaccacaagaagaaagaagcggaagtggggatggtgtcagcaggagccggtcaatccatggctaccgttgctcctatcaatg 11641792  T
Q  199 c 199  Q
    |    
T  11641791 c 11641791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 199
Target Start/End: Complemental strand, 9350546 - 9350407
Alignment:
Q  60 attgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || |||| || ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  9350546 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 9350447  T
Q  160 gagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    ||||||||||||| ||| ||||| |||| ||||| |||||    
T  9350446 gagccggtcaatcaatgactactgttgctcctatcaatgc 9350407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 27776896 - 27777035
Alignment:
Q  60 attgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || |||| || ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  27776896 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 27776995  T
Q  160 gagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    ||||||||||||| ||| ||||| |||| ||||| |||||    
T  27776996 gagccggtcaatcaatgactactgttgctcctatcaatgc 27777035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 27803381 - 27803520
Alignment:
Q  60 attgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || |||| || ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  27803381 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 27803480  T
Q  160 gagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    ||||||||||||| ||| ||||| |||| ||||| |||||    
T  27803481 gagccggtcaatcaatgactactgttgctcctatcaatgc 27803520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 27816663 - 27816802
Alignment:
Q  60 attgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || |||| || ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  27816663 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 27816762  T
Q  160 gagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    ||||||||||||| ||| ||||| |||| ||||| |||||    
T  27816763 gagccggtcaatcaatgactactgttgctcctatcaatgc 27816802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 40233188 - 40233327
Alignment:
Q  60 attgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || |||| || ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  40233188 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 40233287  T
Q  160 gagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    ||||||||||||| ||||||||  |||| ||||| |||||    
T  40233288 gagccggtcaatcaatggctaccgttgctcctatcaatgc 40233327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 77 - 199
Target Start/End: Complemental strand, 19417034 - 19416912
Alignment:
Q  77 tgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatg 176  Q
    ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||| ||||| |||    
T  19417034 tgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccgggcaatcaatg 19416935  T
Q  177 gctactcttgcccctattaatgc 199  Q
    |||||| |||| ||||| |||||    
T  19416934 gctactgttgctcctatcaatgc 19416912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 187
Target Start/End: Original strand, 32049526 - 32049614
Alignment:
Q  99 aagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgc 187  Q
    |||||||| ||||| || || || ||||| |||||||| ||||| |||||||| || || |||||||||||||| ||||||||| ||||    
T  32049526 aagaggtatggtaatggacaccacaagaaaaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgc 32049614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 172
Target Start/End: Complemental strand, 39052380 - 39052268
Alignment:
Q  60 attgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || |||| || ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| || ||||| || || |    
T  39052380 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtgggaatggtgtcagctg 39052281  T
Q  160 gagccggtcaatc 172  Q
    |||||||||||||    
T  39052280 gagccggtcaatc 39052268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 184; Significance: 1e-99; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 8 - 231
Target Start/End: Original strand, 20053 - 20276
Alignment:
Q  8 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtac 107  Q
    |||||||| || |||||||||||| |||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  20053 tgagatggtcaccatggggactcgcctagaagaagctgtcagagaaggcattattgtgttcgagaaagttgaatcctccgcaaatgcatcaaagaggtac 20152  T
Q  108 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgcccagt 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20153 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 20252  T
Q  208 tatttccgtcgtacccgtatgcgc 231  Q
    ||  |||||||||||| |||||||    
T  20253 tacctccgtcgtacccatatgcgc 20276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 205
Target Start/End: Original strand, 30095 - 30291
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| ||||||||  |||| || || || ||||| ||||||| ||  |||||||| |  |||||||| | |||||| |    
T  30095 gagatggtcaccatgggaactcgtctggaagaagccgtcagggatggaatcattgtgttcgagaaagccgaatcctctgtgaatgcatcgaggaggtatg 30194  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgccca 205  Q
    |||| || || || |||||||||||||| ||| |||||||||| || || |||||||||||||||||||||||| |||| ||||| ||||| |||||    
T  30195 gtaatggacaccacaagaagaaagaaacggaaatagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 30291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 184; Significance: 1e-99; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 8 - 235
Target Start/End: Original strand, 15227529 - 15227756
Alignment:
Q  8 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtac 107  Q
    |||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| |     
T  15227529 tgagatggtcaccatggggactcgtctagaagaagctgtcagagaaggcattattgtattcgagaaagatgaatcctccgcaaatgcatcaaagaggcat 15227628  T
Q  108 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgcccagt 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  15227629 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagctggtcaatccatggctactgttgcccctattaatgctgcccagt 15227728  T
Q  208 tatttccgtcgtacccgtatgcgcaata 235  Q
    ||  ||||||||||||||||||||||||    
T  15227729 tacctccgtcgtacccgtatgcgcaata 15227756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 10 - 235
Target Start/End: Complemental strand, 15285538 - 15285313
Alignment:
Q  10 agatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacgg 109  Q
    |||||| || |||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  15285538 agatggtcaccatggggactcgcctagaagaagctgtcagagaaggcattattgtattcgagaaagttgaatcctccgcaaatgcatcaaagaggaacgg 15285439  T
Q  110 taacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgcccagtta 209  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  15285438 taacggtcatcataagaagaaagaaacagaagtatggatggtatctgccggagctggtcaatccatggctactgttgcccctattaatgctgcccagtta 15285339  T
Q  210 tttccgtcgtacccgtatgcgcaata 235  Q
      ||| | |||||| |||||||||||    
T  15285338 cctccattgtacccatatgcgcaata 15285313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 8 - 231
Target Start/End: Original strand, 1899916 - 1900139
Alignment:
Q  8 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtac 107  Q
    |||||||| || ||||||||||||| | ||||||||| |||||||||||||||||||||| |||| |||||||||||| | |||||||||||||||||||    
T  1899916 tgagatggtcaccatggggactcgtttggaagaagctgtcagagaaggcattattgtatttgagaaagttgaatcctctgtaaatgcatcaaagaggtac 1900015  T
Q  108 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgcccagt 207  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1900016 ggtaacgatcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 1900115  T
Q  208 tatttccgtcgtacccgtatgcgc 231  Q
    ||  |||||||||||| |||||||    
T  1900116 tacctccgtcgtacccatatgcgc 1900139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 8 - 209
Target Start/End: Complemental strand, 14236140 - 14235939
Alignment:
Q  8 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtac 107  Q
    |||||||| || |||||| || ||  ||||||| ||| ||||||||| ||||||||| ||||||| ||  |||||||| ||||   ||||||||| ||||    
T  14236140 tgagatggtcaccatgggaacccgcttagaagaggctgtcagagaagacattattgtgttcgagaaaggggaatcctctgcaagcacatcaaagaagtac 14236041  T
Q  108 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgcccagt 207  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||| ||| || |||||||||||||||| ||||    
T  14236040 ggtaatggtcatcataagaagaaagagacagaagtagggatggtatctgccggaaccagtcaatccatggccactgttacccctattaatgctgctcagt 14235941  T
Q  208 ta 209  Q
    ||    
T  14235940 ta 14235939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 205
Target Start/End: Original strand, 14664675 - 14664871
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| || |||||  | || ||||| || ||||| ||||||| || ||||||||| |  ||||||||||||||||| |    
T  14664675 gagatggtcaccatgggaactcgtctggaggaagccgttagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 14664774  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgccca 205  Q
    |||| || || || |||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||| |||| ||||| |||||||||||    
T  14664775 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtctgccggagctggtcaatccatggctactgttgctcctatcaatgctgccca 14664871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 8 - 182
Target Start/End: Complemental strand, 15391948 - 15391774
Alignment:
Q  8 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtac 107  Q
    |||||||| || |||||| || ||  ||||||| ||| ||||||| ||||||||||| || | || || ||||||||| ||||||||||||| || |||     
T  15391948 tgagatggtcaccatgggaacccgcttagaagaggctgtcagagatggcattattgtgtttgggaaaggtgaatcctctgcaaatgcatcaaggaagtat 15391849  T
Q  108 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctact 182  Q
    || || |||||||||||||||||||| ||||||||||||||||||||||| ||| || |||||||||||||||||    
T  15391848 ggcaatggtcatcataagaagaaagagacagaagtagggatggtatctgctggaaccagtcaatccatggctact 15391774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 9 - 205
Target Start/End: Original strand, 17013657 - 17013853
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| ||||| || ||||| ||||||| || ||||||||| |  ||||||||||||||||| |    
T  17013657 gagatggtcaccatgggaacccgtctggaggaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 17013756  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgccca 205  Q
    |||| || || || |||||||||||||| |||||||||||||| || |||||||| |||||||||||||||||| |||| ||||| ||||| |||||    
T  17013757 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagccggagctggtcaatccatggctactgttgctcctatcaatgcagccca 17013853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 24592925 - 24592735
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| ||||||||  |||| || || || ||||| ||||||| || ||||||||| |  |||||||| |||||||| |    
T  24592925 gagatggtcaccatgggaacccgtctggaagaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 24592826  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||| |||||||||| || || |||||||||||||||||||||||| |||| ||||| |||||    
T  24592825 gtaatggacaccacaagaagaaagaaacggaaatagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgc 24592735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 14763918 - 14763728
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| ||||||| || ||||||||| |  |||||||| |||||||| |    
T  14763918 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 14763819  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||| ||| |||| ||||| |||||    
T  14763818 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggccactgttgctcctatcaatgc 14763728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 36345126 - 36344936
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| ||||||| || ||||||||| |  |||||||| |||||||| |    
T  36345126 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 36345027  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||| ||| |||| ||||| |||||    
T  36345026 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggccactgttgctcctatcaatgc 36344936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 31127049 - 31126942
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccct 191  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||| ||||||||| |||| |||    
T  31127049 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctggagccggtcaatcaatggctactgttgctcct 31126950  T
Q  192 attaatgc 199  Q
    || |||||    
T  31126949 atcaatgc 31126942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 6569510 - 6569700
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || |||| || ||||||||| || |||||||| ||||| || |    
T  6569510 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgcgaatgcatcgaagagatatg 6569609  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||| ||| |||| ||||| |||||    
T  6569610 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggccactgttgctcctatcaatgc 6569700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 14098198 - 14098388
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || |||| || ||||||||| | |||||| || ||||| || |    
T  14098198 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtaaatgcgtcgaagagatatg 14098297  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||||||| |||| ||||| |||||    
T  14098298 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcctatcaatgc 14098388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 19372918 - 19373108
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || |||| || ||||||||| |  |||||||| |||||||| |    
T  19372918 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 19373017  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||||||  |||| ||||| |||||    
T  19373018 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatctatggctaccgttgctcctatcaatgc 19373108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 187
Target Start/End: Complemental strand, 27163848 - 27163753
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgc 187  Q
    |||||| || ||||||||||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||| ||||||||| ||||    
T  27163848 tgcatcgaaaaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtatcagctggagccggtcaatcaatggctactgttgc 27163753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 199
Target Start/End: Original strand, 30753482 - 30753589
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccct 191  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||| | || || |||||||||||||||||||||||| |||| |||    
T  30753482 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatgatgtcagctggagccggtcaatccatggctactgttgcacct 30753581  T
Q  192 attaatgc 199  Q
    || |||||    
T  30753582 atcaatgc 30753589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 99 - 199
Target Start/End: Original strand, 54833137 - 54833237
Alignment:
Q  99 aagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatg 198  Q
    |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||||||||| ||| |||| ||||| ||||    
T  54833137 aagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcgggagccggtcaatccatggccactgttgctcctatcaatg 54833236  T
Q  199 c 199  Q
    |    
T  54833237 c 54833237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 40106169 - 40106062
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccct 191  Q
    |||||| || |||||||||||  | || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||||||| |||| |||    
T  40106169 tgcatcgaaaaggtacggtaatagacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcct 40106070  T
Q  192 attaatgc 199  Q
    || |||||    
T  40106069 atcaatgc 40106062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 181
Target Start/End: Original strand, 5005617 - 5005699
Alignment:
Q  99 aagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctac 181  Q
    |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||||||||||||    
T  5005617 aagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcgggagccggtcaatccatggctac 5005699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 199
Target Start/End: Complemental strand, 18801168 - 18801046
Alignment:
Q  77 tgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatg 176  Q
    ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||||||||| |||||||| || || |||||||||||| | |||    
T  18801168 tgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacagaagtggggatggtgtcagctggagccggtcaagctatg 18801069  T
Q  177 gctactcttgcccctattaatgc 199  Q
    |||||| |||| ||||| |||||    
T  18801068 gctactgttgcacctatcaatgc 18801046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 199
Target Start/End: Complemental strand, 33674356 - 33674234
Alignment:
Q  77 tgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatg 176  Q
    ||||||||| | |||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||    
T  33674356 tgaatcctctgtaaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatg 33674257  T
Q  177 gctactcttgcccctattaatgc 199  Q
    |||||  |||| ||||| |||||    
T  33674256 gctaccgttgctcctatcaatgc 33674234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 187
Target Start/End: Original strand, 21969441 - 21969536
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgc 187  Q
    |||||| |||||||| ||||| || || || ||||| |||||||| ||||| |||||||| || || |||||||||||||| ||||||||| ||||    
T  21969441 tgcatcgaagaggtatggtaatggacaccacaagaaaaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgc 21969536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 199
Target Start/End: Original strand, 39850394 - 39850470
Alignment:
Q  123 aagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    |||||||||||||| ||||| || ||||| || || |||||||||||||| ||||||||| |||| ||||| |||||    
T  39850394 aagaagaaagaaacggaagtgggaatggtgtcagctggagccggtcaatcaatggctactgttgcacctatcaatgc 39850470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 180; Significance: 2e-97; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 8 - 235
Target Start/End: Original strand, 20460748 - 20460975
Alignment:
Q  8 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtac 107  Q
    |||||||| || |||||||||||| |||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||    
T  20460748 tgagatggtcaccatggggactcgcctagaagaagctgtcagagaaggcattattatattcgagaaagttgaatcctccgccaatgcatcaaagaggtac 20460847  T
Q  108 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgcccagt 207  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20460848 ggtaacggtcatcataagaagaaagaaatagaagtagggatggtatctgccggagccggtcaatccatggctactattgcccctattaatgctgcccagt 20460947  T
Q  208 tatttccgtcgtacccgtatgcgcaata 235  Q
    ||  |||| |||||||||||||||||||    
T  20460948 tacctccgccgtacccgtatgcgcaata 20460975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 8 - 209
Target Start/End: Complemental strand, 16208640 - 16208439
Alignment:
Q  8 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtac 107  Q
    |||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||||||| | ||||||||||||||| |||    
T  16208640 tgagatggtcaccatggggactcgtctagaagaagctgtcagagaaggcattattgtatttgagaaagttgaatcctctgtaaatgcatcaaagagttac 16208541  T
Q  108 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgcccagt 207  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  16208540 ggtaacggtcatcataagaagaaagaaacagaagtagagatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagt 16208441  T
Q  208 ta 209  Q
    ||    
T  16208440 ta 16208439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 92 - 205
Target Start/End: Complemental strand, 41793839 - 41793726
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccct 191  Q
    ||||||||||||||| ||||| || || || |||||||||||||| ||||| || |||||||| || |||||||||||||||||||||||  |||| |||    
T  41793839 tgcatcaaagaggtatggtaatggacaccacaagaagaaagaaacggaagtgggaatggtatcagctggagccggtcaatccatggctaccgttgctcct 41793740  T
Q  192 attaatgctgccca 205  Q
    || ||||| |||||    
T  41793739 atcaatgcagccca 41793726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 10962362 - 10962501
Alignment:
Q  60 attgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || |||| || ||||||||| |  |||||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  10962362 attgtgtttgagaaagctgaatcctctgtgaatgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 10962461  T
Q  160 gagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    ||||||||||||| ||||||||| |||| ||||| |||||    
T  10962462 gagccggtcaatcaatggctactgttgctcctatcaatgc 10962501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 51637910 - 51638049
Alignment:
Q  60 attgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || |||| || |||||| || |||| ||| || |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  51637910 attgtgtttgagaaagctgaatcttctgcaagtgcgtcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 51638009  T
Q  160 gagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    ||||||||||||| ||||||||| |||| ||||| |||||    
T  51638010 gagccggtcaatcaatggctactgttgctcctatcaatgc 51638049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 77 - 199
Target Start/End: Original strand, 28584690 - 28584812
Alignment:
Q  77 tgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatg 176  Q
    ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||| ||||| |||    
T  28584690 tgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccgggcaatcaatg 28584789  T
Q  177 gctactcttgcccctattaatgc 199  Q
    |||||| |||| ||||| |||||    
T  28584790 gctactgttgctcctatcaatgc 28584812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 176; Significance: 6e-95; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 20 - 231
Target Start/End: Original strand, 16040980 - 16041191
Alignment:
Q  20 catggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcat 119  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||    
T  16040980 catgggaactcgtctagaagaagctgtcagagaaggcattattgtattcgagaaagttgaatcctccgtaaatgcatcaaagaggtatggtaacggtcat 16041079  T
Q  120 cataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgcccagttatttccgtcgt 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||    
T  16041080 cataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactgttgcccctattaatgctgcccagttacctccgtcgt 16041179  T
Q  220 acccgtatgcgc 231  Q
    |||| |||||||    
T  16041180 acccatatgcgc 16041191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 8 - 232
Target Start/End: Complemental strand, 16450496 - 16450272
Alignment:
Q  8 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtac 107  Q
    |||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| | |||||||||||| || |||    
T  16450496 tgagatggtcaccatggggactcgtctagaagaagctgtcagagaaggcattattgtattcgagaaagttgaatcctctgtaaatgcatcaaaaagatac 16450397  T
Q  108 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgcccagt 207  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  16450396 ggtaacggtcatcataagaagaaagaaacaaaagtagggatggtatctgccggagccggtcaatccatagctactgttgcccctattaatgctgcccagt 16450297  T
Q  208 tatttccgtcgtacccgtatgcgca 232  Q
    ||  ||||||||||||||| |||||    
T  16450296 tacctccgtcgtacccgtacgcgca 16450272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 9 - 205
Target Start/End: Complemental strand, 16518916 - 16518720
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| ||||||||  |||||||||| || ||||| ||||| | || ||||||||| | |||||||||||||||||| |    
T  16518916 gagatggtcaccatgggaactcgtctggaagaagccgtcagagaaggaatcattgtgttcgaaaaagctgaatcctctgtaaatgcatcaaagaggtatg 16518817  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgccca 205  Q
    ||||||| || || |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  16518816 gtaacggacaccacaagaagaaagaaacggaagtagggatggtgtctgccggagccggtcaatccatggctactgttgctcctattaatgctgccca 16518720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 9 - 205
Target Start/End: Complemental strand, 16503880 - 16503684
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| ||||||||  |||||||||| || ||||| ||||| | || ||||||||| |  ||||||||||||||||| |    
T  16503880 gagatggtcaccatgggaactcgtctggaagaagccgtcagagaaggaatcattgtgttcgaaaaagctgaatcctctgtgaatgcatcaaagaggtatg 16503781  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgccca 205  Q
    ||||||| || || |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  16503780 gtaacggacaccacaagaagaaagaaacggaagtagggatggtgtctgccggagccggtcaatccatggctactgttgctcctattaatgctgccca 16503684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 9 - 205
Target Start/End: Original strand, 2154216 - 2154412
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| ||||||||  |||| || |  || ||||| ||||||| || ||||||||| |  ||||||||||||||||| |    
T  2154216 gagatggtcaccatgggaactcgtctggaagaagccgtcagggatgaaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 2154315  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgccca 205  Q
    |||| || || || |||||||||||||| |||||||||||||| || || |||||||||||||||||||||||| |||| ||||| ||||| |||||    
T  2154316 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 2154412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 205
Target Start/End: Complemental strand, 10917365 - 10917169
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| ||||||||  | || || |  || ||||| || |||| || ||||||||| |  ||||||||||||||||| |    
T  10917365 gagatggtcaccatgggaactcgtctggaagaagccgttagggatgaaatcattgtgtttgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 10917266  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgccca 205  Q
    |||| || || || |||||||||||||| |||||||||||||| || || |||||||||||||||||||||||| |||| ||||| ||||| |||||    
T  10917265 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 10917169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 198
Target Start/End: Complemental strand, 11425276 - 11425087
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| ||||||| || ||||||||| |  |||||||| |||||||| |    
T  11425276 gagatggtcaccatgggaacccgtctggaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 11425177  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatg 198  Q
    |||| || || || |||||||||||||| |||||||||||||| || || |||||||||||||||||||||||| |||| ||||| ||||    
T  11425176 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatg 11425087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 5127635 - 5127825
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| ||||||| || ||| ||||| |  |||||||| |||||||| |    
T  5127635 gagatggtcaccatgggaacccgtctggaggaagccgtcagggatggaatcattgtgttcgagaaagctgagtcctctgtgaatgcatcgaagaggtatg 5127734  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| |||||||||||||| || || |||||||||||||||||||||||| |||| ||||| |||||    
T  5127735 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgc 5127825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 5147840 - 5147650
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || |||| || |||||| || || |||||||| |||||||| |    
T  5147840 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatgggatcattgtgtttgagaaagctgaatcttctgcgaatgcatcgaagaggtatg 5147741  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||||||||||||  |||| ||||| |||||    
T  5147740 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatccatggctaccattgctcctatcaatgc 5147650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 31124554 - 31124744
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || |||| || ||||||||| || |||||||| ||||| || |    
T  31124554 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgcgaatgcatcgaagagatatg 31124653  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| |||||||||||||| || || |||||||||||||| ||||||||  |||| ||||| |||||    
T  31124654 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatcaatggctaccgttgctcctatcaatgc 31124744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 57 - 199
Target Start/End: Original strand, 45387034 - 45387176
Alignment:
Q  57 attattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctg 156  Q
    |||||||| || |||| || |||||| || |||| ||| || |||||||| ||||| || || || |||||||||||||| ||||| ||||||||||| |    
T  45387034 attattgtgtttgagaaagctgaatcttctgcaagtgcgtcgaagaggtatggtaatggacaccacaagaagaaagaaactgaagtggggatggtatcag 45387133  T
Q  157 ccggagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    | |||||||||||||| ||||||||| |||| ||||| |||||    
T  45387134 ctggagccggtcaatcaatggctactgttgctcctatcaatgc 45387176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 26275511 - 26275404
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccct 191  Q
    |||||| |||||||||||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||||||| |||| |||    
T  26275511 tgcatcgaagaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcct 26275412  T
Q  192 attaatgc 199  Q
    || |||||    
T  26275411 atcaatgc 26275404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 93 - 199
Target Start/End: Complemental strand, 4145539 - 4145433
Alignment:
Q  93 gcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgccccta 192  Q
    ||||| |||||||| ||||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||| ||||||||| |||| ||||    
T  4145539 gcatcgaagaggtatggtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctggagccggtcaatcaatggctactgttgctccta 4145440  T
Q  193 ttaatgc 199  Q
    | |||||    
T  4145439 tcaatgc 4145433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 24593041 - 24592851
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || |||| || ||||||||| | |||||| || ||||| || |    
T  24593041 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtaaatgcgtcgaagagatatg 24592942  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||||||| |||| ||||| |||||    
T  24592941 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcctatcaatgc 24592851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 94 - 199
Target Start/End: Complemental strand, 26320284 - 26320179
Alignment:
Q  94 catcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctat 193  Q
    |||| |||||||||||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||||||| |||| |||||    
T  26320284 catcgaagaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcctat 26320185  T
Q  194 taatgc 199  Q
     |||||    
T  26320184 caatgc 26320179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 199
Target Start/End: Original strand, 3445020 - 3445127
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccct 191  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||||||| |||| |||    
T  3445020 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcct 3445119  T
Q  192 attaatgc 199  Q
    || |||||    
T  3445120 atcaatgc 3445127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 199
Target Start/End: Original strand, 9618377 - 9618484
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccct 191  Q
    |||||| ||||| || ||||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||| ||||||||| |||| |||    
T  9618377 tgcatcgaagagatatggtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctggagccggtcaatcaatggctactgttgctcct 9618476  T
Q  192 attaatgc 199  Q
    || |||||    
T  9618477 atcaatgc 9618484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 16736960 - 16736770
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || |||| || |||||| || || | ||| || ||||| || |    
T  16736960 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcttctgcgagtgcgtcgaagagatatg 16736861  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||||||||||||  |||| ||||| |||||    
T  16736860 gtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctggagccggtcaatccatggctaccgttgctcctatcaatgc 16736770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 16752014 - 16751824
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || |||| || |||||| || || | ||| || ||||| || |    
T  16752014 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcttctgcgagtgcgtcgaagagatatg 16751915  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||||||||||||  |||| ||||| |||||    
T  16751914 gtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctggagccggtcaatccatggctaccgttgctcctatcaatgc 16751824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 17523175 - 17523365
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || |||| || |||||| || || | ||| || ||||| || |    
T  17523175 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcttctgcgagtgcgtcgaagagatatg 17523274  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||||||||||||  |||| ||||| |||||    
T  17523275 gtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctggagccggtcaatccatggctaccgttgctcctatcaatgc 17523365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 17530040 - 17529850
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || |||| || |||||| || || | ||| || ||||| || |    
T  17530040 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcttctgcgagtgcgtcgaagagatatg 17529941  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||||||||||||  |||| ||||| |||||    
T  17529940 gtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctggagccggtcaatccatggctaccgttgctcctatcaatgc 17529850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 199
Target Start/End: Original strand, 11441271 - 11441393
Alignment:
Q  77 tgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatg 176  Q
    ||||||||| | |||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||    
T  11441271 tgaatcctctgtaaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatg 11441370  T
Q  177 gctactcttgcccctattaatgc 199  Q
    |||||  |||| ||||| |||||    
T  11441371 gctaccgttgctcctatcaatgc 11441393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 26486161 - 26486054
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccct 191  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| || |||||  |||| |||    
T  26486161 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatagctaccgttgctcct 26486062  T
Q  192 attaatgc 199  Q
    || |||||    
T  26486061 atcaatgc 26486054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 31564816 - 31564709
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccct 191  Q
    |||||| ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||||||  |||| |||    
T  31564816 tgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatctatggctaccgttgctcct 31564717  T
Q  192 attaatgc 199  Q
    || |||||    
T  31564716 atcaatgc 31564709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 26670331 - 26670224
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccct 191  Q
    |||||| ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| || |||||  |||| |||    
T  26670331 tgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatagctaccgttgctcct 26670232  T
Q  192 attaatgc 199  Q
    || |||||    
T  26670231 atcaatgc 26670224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 193
Target Start/End: Original strand, 26435014 - 26435084
Alignment:
Q  123 aagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctat 193  Q
    |||||||||||||| ||||| |||||||| || || ||||||||||| |||||||| ||| |||| |||||    
T  26435014 aagaagaaagaaacggaagtggggatggtgtcagcaggagccggtcagtccatggccactgttgctcctat 26435084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 199
Target Start/End: Complemental strand, 26538322 - 26538183
Alignment:
Q  60 attgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || |||| || ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| || ||||| || || |    
T  26538322 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtgggaatggtgtcagctg 26538223  T
Q  160 gagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    ||||||||||||| || |||||  |||| ||||| |||||    
T  26538222 gagccggtcaatcaatagctaccgttgctcctatcaatgc 26538183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 149; Significance: 8e-79; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 7 - 231
Target Start/End: Original strand, 23891855 - 23892079
Alignment:
Q  7 atgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggta 106  Q
    ||||||||| || ||||||||||||||| ||||||||| |||||||||| |||||||||||||||| ||||||||||||||  |||||||||||||||||    
T  23891855 atgagatggtcaccatggggactcgtctggaagaagctgtcagagaaggaattattgtattcgagaaagttgaatcctccgtgaatgcatcaaagaggta 23891954  T
Q  107 cggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgcccag 206  Q
     |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||     
T  23891955 tggtaacggacatcataagaagaaagaaacagaagtagggatggtatctgccggagccgatcaatccatggctactgttgctcctattaatgctgcccaa 23892054  T
Q  207 ttatttccgtcgtacccgtatgcgc 231  Q
     |   |||||||||||| |||||||    
T  23892055 atgcctccgtcgtacccatatgcgc 23892079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 8 - 231
Target Start/End: Original strand, 25198682 - 25198905
Alignment:
Q  8 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtac 107  Q
    |||||||| || ||||||||||| ||| ||||||||| |||||||||| |||||||||||||||| ||||||||||||||  ||||||||||||||||||    
T  25198682 tgagatggtcaccatggggactcatctggaagaagctgtcagagaaggaattattgtattcgagaaagttgaatcctccgtgaatgcatcaaagaggtac 25198781  T
Q  108 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgcccagt 207  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||| |||| |    
T  25198782 ggtaacggacatcataagaagaaggaaacagaagtagggatggtatccgccggagccggtcaatccatggctactgttgctcctattaatgcttcccaat 25198881  T
Q  208 tatttccgtcgtacccgtatgcgc 231  Q
    |   |||||||||||| |||||||    
T  25198882 tgcctccgtcgtacccatatgcgc 25198905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 9 - 203
Target Start/End: Original strand, 24951761 - 24951955
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| ||||||||  |||||||||| || ||||| ||||||| || ||||||||| |  ||||||||||||||||| |    
T  24951761 gagatggtcaccatgggaactcgtctggaagaagccgtcagagaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 24951860  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgcc 203  Q
    ||||||| || || |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||| ||||| |||||||||    
T  24951861 gtaacggacaccacaagaagaaagaaacggaagtagggatggtgtctgccggagccggtcaatccatggctactgttgctcctatcaatgctgcc 24951955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 9 - 205
Target Start/End: Complemental strand, 24688668 - 24688472
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| ||||||||  |||||||||| || ||||| ||||||| || ||||||||| |  ||||||||||||||||| |    
T  24688668 gagatggtcaccatgggaactcgtctggaagaagccgtcagagaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 24688569  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgccca 205  Q
    |||| || || || |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||| ||||| ||||| |||||    
T  24688568 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtctgccggagccggtcaatccatggctactgttgctcctatcaatgcagccca 24688472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 205
Target Start/End: Original strand, 30934287 - 30934483
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| ||||||||  |||| ||||| || ||||| ||||||| || ||||||||| |  ||||||||||||||||| |    
T  30934287 gagatggtcaccatgggaactcgtctggaagaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 30934386  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgccca 205  Q
    |||| || || || |||||||||||||| |||||||||||||| ||| |||||||||| ||||||||| ||||| |||| ||||| ||||| |||||    
T  30934387 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtctaccggagccggccaatccatgactactgttgctcctatcaatgcagccca 30934483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 9 - 205
Target Start/End: Complemental strand, 23752961 - 23752765
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| ||||||||  |||| || || || ||||| ||||||| || ||||||||| |  |||||||| |||||||| |    
T  23752961 gagatggtcaccatgggaactcgtctggaagaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 23752862  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgccca 205  Q
    |||| || || || |||||||||||||| |||||||||||||| || || |||||||||||||||||||||||| |||| ||||| ||||| |||||    
T  23752861 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 23752765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 205
Target Start/End: Complemental strand, 23718500 - 23718303
Alignment:
Q  9 gagatggacatcatggggactcgtctagaag-aagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtac 107  Q
    ||||||| || |||||| |||||||| |||| ||||  |||| || || || ||||| ||||||| || ||||||||| |  |||||||| ||||||||     
T  23718500 gagatggtcaccatgggaactcgtctggaaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtat 23718401  T
Q  108 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgccca 205  Q
    ||||| || || || |||||||||||||| |||||||||||||| || || |||||||||||||||||||||||| |||| ||||| ||||| |||||    
T  23718400 ggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 23718303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 205
Target Start/End: Original strand, 11549005 - 11549201
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| ||||||| || ||||||||| |  |||||||| |||||||| |    
T  11549005 gagatggtcaccatgggaacccgtctggaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 11549104  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgccca 205  Q
    |||| || || || |||||||||||||| |||||||||||||| || || |||||||||||||||||||||||| |||| ||||| ||||| |||||    
T  11549105 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 11549201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 10 - 205
Target Start/End: Complemental strand, 22999624 - 22999429
Alignment:
Q  10 agatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacgg 109  Q
    |||||| || |||||| || ||||| || |||||  |||| || || || ||||| ||||||| || ||||||||| |  |||||||| |||||||| ||    
T  22999624 agatggtcaccatgggaacccgtctggaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatgg 22999525  T
Q  110 taacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgccca 205  Q
    ||| || || || |||||||||||||| ||| |||||||||| || || |||||||||||||||||||||||| |||| ||||| ||||| |||||    
T  22999524 taatggacaccacaagaagaaagaaacggaaatagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 22999429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 33777138 - 33777328
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| ||||||| || ||||||||| |  |||||||| |||||||| |    
T  33777138 gagatggtcaccatgggaacccgtctggaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 33777237  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| |||||||||||||| || || ||||| |||||||||||||||||| |||| ||||| |||||    
T  33777238 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagctggtcaatccatggctactgttgctcctatcaatgc 33777328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 15659271 - 15659081
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| ||||||| || ||||||||| |  |||||||| |||||||| |    
T  15659271 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 15659172  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||||||| |||| ||||| |||||    
T  15659171 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcctatcaatgc 15659081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 199
Target Start/End: Complemental strand, 40474051 - 40473873
Alignment:
Q  21 atggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatc 120  Q
    ||||| || ||||| ||||||||  |||| || || || ||||| || |||| || ||||||||| |  ||||| || ||||| |||||||| || || |    
T  40474051 atgggaacccgtcttgaagaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatacggtaatggacacc 40473952  T
Q  121 ataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    | |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||||||| |||||||||| |||||    
T  40473951 acaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgcccctatcaatgc 40473873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 92 - 205
Target Start/End: Original strand, 2510785 - 2510898
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccct 191  Q
    ||||||||||||||| ||||| || || || |||||||||||||| ||||| || |||||||| || |||||||||||||||||||||||  |||| |||    
T  2510785 tgcatcaaagaggtatggtaatggacaccacaagaagaaagaaacggaagtgggaatggtatcagctggagccggtcaatccatggctaccgttgctcct 2510884  T
Q  192 attaatgctgccca 205  Q
    || ||||| |||||    
T  2510885 atcaatgcagccca 2510898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 92 - 199
Target Start/End: Original strand, 9317185 - 9317292
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccct 191  Q
    ||||||||||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||||||| |||| |||    
T  9317185 tgcatcaaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcct 9317284  T
Q  192 attaatgc 199  Q
    || |||||    
T  9317285 atcaatgc 9317292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 92 - 199
Target Start/End: Original strand, 12131889 - 12131996
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccct 191  Q
    |||||| |||||||||||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||||||| |||| |||    
T  12131889 tgcatcgaagaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcct 12131988  T
Q  192 attaatgc 199  Q
    || |||||    
T  12131989 atcaatgc 12131996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 92 - 199
Target Start/End: Original strand, 24681171 - 24681278
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccct 191  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||||||||||||| |||| |||    
T  24681171 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatccatggctactgttgcacct 24681270  T
Q  192 attaatgc 199  Q
    || |||||    
T  24681271 atcaatgc 24681278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 92 - 199
Target Start/End: Original strand, 24723698 - 24723805
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccct 191  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||||||||||||| |||| |||    
T  24723698 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatccatggctactgttgcacct 24723797  T
Q  192 attaatgc 199  Q
    || |||||    
T  24723798 atcaatgc 24723805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 37771427 - 37771320
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccct 191  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||| ||||||||| |||| |||    
T  37771427 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtatcagctggagccggtcaatcaatggctactgttgcacct 37771328  T
Q  192 attaatgc 199  Q
    || |||||    
T  37771327 atcaatgc 37771320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 93 - 199
Target Start/End: Complemental strand, 8665902 - 8665796
Alignment:
Q  93 gcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgccccta 192  Q
    ||||| |||||||| ||||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||| ||||||||| |||| ||||    
T  8665902 gcatcgaagaggtatggtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctggagccggtcaatcaatggctactgttgctccta 8665803  T
Q  193 ttaatgc 199  Q
    | |||||    
T  8665802 tcaatgc 8665796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 199
Target Start/End: Original strand, 6874036 - 6874143
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccct 191  Q
    ||||||||||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||| ||||| |||| |||    
T  6874036 tgcatcaaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatgactactgttgctcct 6874135  T
Q  192 attaatgc 199  Q
    || |||||    
T  6874136 atcaatgc 6874143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 187
Target Start/End: Complemental strand, 18375840 - 18375745
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgc 187  Q
    |||||| || ||||||||||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||| ||||||||| ||||    
T  18375840 tgcatcgaaaaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtatcagctggagccggtcaatcaatggctactgttgc 18375745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 187
Target Start/End: Original strand, 30151752 - 30151847
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgc 187  Q
    |||||| || ||||||||||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||| ||||||||| ||||    
T  30151752 tgcatcgaaaaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtatcagctggagccggtcaatcaatggctactgttgc 30151847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 187
Target Start/End: Original strand, 30168203 - 30168298
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgc 187  Q
    |||||| ||||| || ||||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||||||||||||| ||||    
T  30168203 tgcatcgaagagatatggtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctggagccggtcaatccatggctactattgc 30168298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 31826847 - 31826740
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccct 191  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||||||| |||| |||    
T  31826847 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcct 31826748  T
Q  192 attaatgc 199  Q
    || |||||    
T  31826747 atcaatgc 31826740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 37671920 - 37671813
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccct 191  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || ||||||||||||||||| ||||||||  |||| |||    
T  37671920 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagccggagccggtcaatctatggctaccgttgctcct 37671821  T
Q  192 attaatgc 199  Q
    || |||||    
T  37671820 atcaatgc 37671813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 90 - 193
Target Start/End: Original strand, 41674441 - 41674544
Alignment:
Q  90 aatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgccc 189  Q
    ||||| || |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||||||||||||| |||| |    
T  41674441 aatgcgtcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatccatggctactgttgctc 41674540  T
Q  190 ctat 193  Q
    ||||    
T  41674541 ctat 41674544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 5637561 - 5637751
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || |||| || ||||||||| |  | |||||| ||||| || |    
T  5637561 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatg 5637660  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||||||| |||| ||||| |||||    
T  5637661 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcctatcaatgc 5637751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 57 - 199
Target Start/End: Complemental strand, 15759320 - 15759178
Alignment:
Q  57 attattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctg 156  Q
    |||||||| || |||| || |||||| || |||| ||| || |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || |    
T  15759320 attattgtgtttgagaaagctgaatcttctgcaagtgcgtcgaagaggtatggtaatggacaccacaagaagaaagaaactgaagtggggatggtgtcag 15759221  T
Q  157 ccggagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    | ||||| |||||||| ||||||||| |||| ||||| |||||    
T  15759220 ctggagcaggtcaatcaatggctactgttgctcctatcaatgc 15759178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 199
Target Start/End: Complemental strand, 37359154 - 37358976
Alignment:
Q  21 atggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatc 120  Q
    ||||| || ||||| || |||||  ||||||| || || |||||||| |||| || |||||| ||  | | |||||| |||||||| ||||| || || |    
T  37359154 atgggaacccgtcttgaggaagcagtcagagatgggatcattgtatttgagaaagctgaatcttctacgagtgcatcgaagaggtatggtaatggacacc 37359055  T
Q  121 ataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    | |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||||||  |||| ||||| |||||    
T  37359054 acaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatctatggctaccgttgctcctatcaatgc 37358976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 92 - 193
Target Start/End: Complemental strand, 9548971 - 9548870
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccct 191  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||||||||| ||| |||| |||    
T  9548971 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatccatggccactgttgctcct 9548872  T
Q  192 at 193  Q
    ||    
T  9548871 at 9548870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 92 - 181
Target Start/End: Original strand, 33516090 - 33516179
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctac 181  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||||||||||||    
T  33516090 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaactgaagtggggatggtgtcagctggagccggtcaatccatggctac 33516179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 60 - 199
Target Start/End: Complemental strand, 18501208 - 18501069
Alignment:
Q  60 attgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || |||| || ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  18501208 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 18501109  T
Q  160 gagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    ||||||||||||| ||||||||| |||| ||||| |||||    
T  18501108 gagccggtcaatcaatggctactgttgctcctatcaatgc 18501069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 172 - 231
Target Start/End: Original strand, 22888287 - 22888346
Alignment:
Q  172 ccatggctactcttgcccctattaatgctgcccagttatttccgtcgtacccgtatgcgc 231  Q
    ||||||||||| ||||||||||||||||||||||||||  |||||||||||| |||||||    
T  22888287 ccatggctactgttgcccctattaatgctgcccagttacctccgtcgtacccatatgcgc 22888346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 92 - 199
Target Start/End: Original strand, 26480126 - 26480233
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccct 191  Q
    |||||| ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||||||| |||| |||    
T  26480126 tgcatcgaagagatatggtaatggacaccacaagaagaaagaaactgaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcct 26480225  T
Q  192 attaatgc 199  Q
    || |||||    
T  26480226 atcaatgc 26480233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 92 - 199
Target Start/End: Original strand, 31431162 - 31431269
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccct 191  Q
    |||||| ||||| || ||||| || || || |||||||||||||| ||||| ||||||||||| || ||||||||||||||  |||||||| |||| |||    
T  31431162 tgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtatcagctggagccggtcaatctgtggctactgttgctcct 31431261  T
Q  192 attaatgc 199  Q
    || |||||    
T  31431262 atcaatgc 31431269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 37754670 - 37754809
Alignment:
Q  60 attgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || |||| || |||||| || |||| ||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  37754670 attgtgtttgagaaagctgaatcttctgcaagtgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 37754769  T
Q  160 gagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    ||||||||||||| ||||||||| |||| ||||| |||||    
T  37754770 gagccggtcaatcaatggctactgttgcacctatcaatgc 37754809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 3789177 - 3789367
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || |||| || ||||||||| |  | |||||| ||||| || |    
T  3789177 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatg 3789276  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||||||  |||| ||||| |||||    
T  3789277 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctaccgttgctcctatcaatgc 3789367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 92 - 205
Target Start/End: Complemental strand, 32599897 - 32599784
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccct 191  Q
    |||||| |||||||| ||||| || || || |||||||| ||||| ||||| |||||||| || || |||||||||||||| ||| ||||| |||| |||    
T  32599897 tgcatcgaagaggtatggtaatggacaccacaagaagaaggaaacggaagtggggatggtgtcagctggagccggtcaatcaatgactactgttgctcct 32599798  T
Q  192 attaatgctgccca 205  Q
    || ||||| |||||    
T  32599797 atcaatgcagccca 32599784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 92 - 205
Target Start/End: Original strand, 34616255 - 34616368
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccct 191  Q
    |||||| ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||| | ||||||||| |||| |||    
T  34616255 tgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaagctatggctactgttgcacct 34616354  T
Q  192 attaatgctgccca 205  Q
    || ||||| |||||    
T  34616355 atcaatgcagccca 34616368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 92 - 198
Target Start/End: Complemental strand, 28960226 - 28960120
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccct 191  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||| ||||| | ||||||| |||| |||    
T  28960226 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccgggcaatcaacggctactgttgcacct 28960127  T
Q  192 attaatg 198  Q
    || ||||    
T  28960126 atcaatg 28960120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 43077900 - 43078090
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || |||| || ||||||||| |  ||||| || ||||| || |    
T  43077900 gagatggtcaccatgggaacccgtctcgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatg 43077999  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| |||||||| ||  | |||||||||||| | ||||||||| |||| ||||| |||||    
T  43078000 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcaactggagccggtcaagctatggctactgttgcacctatcaatgc 43078090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 13325272 - 13325165
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccct 191  Q
    |||||| ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || ||||| |||||||| ||||||||  |||| |||    
T  13325272 tgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagctggtcaatcaatggctaccgttgctcct 13325173  T
Q  192 attaatgc 199  Q
    || |||||    
T  13325172 atcaatgc 13325165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 77 - 187
Target Start/End: Original strand, 28648945 - 28649055
Alignment:
Q  77 tgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatg 176  Q
    ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||| | |||    
T  28648945 tgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaagctatg 28649044  T
Q  177 gctactcttgc 187  Q
    |||||| ||||    
T  28649045 gctactgttgc 28649055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 77 - 199
Target Start/End: Complemental strand, 29967509 - 29967387
Alignment:
Q  77 tgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatg 176  Q
    ||||||||| |  ||||| || ||||| || ||||| || || || || ||||||||||| ||||| |||||||| || || |||||||| ||||| |||    
T  29967509 tgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaaaaagaaagaaacggaagtggggatggtgtcagctggagccgggcaatcaatg 29967410  T
Q  177 gctactcttgcccctattaatgc 199  Q
    |||||| |||| ||||| |||||    
T  29967409 gctactgttgctcctatcaatgc 29967387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 77 - 199
Target Start/End: Original strand, 30029134 - 30029256
Alignment:
Q  77 tgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatg 176  Q
    ||||||||| |  ||||| || ||||| || ||||| || || || || ||||||||||| ||||| |||||||| || || |||||||| ||||| |||    
T  30029134 tgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaaaaagaaagaaacggaagtggggatggtgtcagctggagccgggcaatcaatg 30029233  T
Q  177 gctactcttgcccctattaatgc 199  Q
    |||||| |||| ||||| |||||    
T  30029234 gctactgttgctcctatcaatgc 30029256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 115; Significance: 1e-58; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 9 - 231
Target Start/End: Original strand, 16283091 - 16283313
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| ||||||||  |||||||||| || ||||||||||||| || ||||||||| |  ||||||||||||||||| |    
T  16283091 gagatggtcaccatgggaactcgtctggaagaagccgtcagagaaggaatcattgtattcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 16283190  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgcccagtt 208  Q
    ||||||| || || |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||  |    
T  16283191 gtaacggacaccacaagaagaaagaaacggaagtagggatggtgtctgccggagccggtcaatccatggctactgttgctcctattaatgctgcccaaat 16283290  T
Q  209 atttccgtcgtacccgtatgcgc 231  Q
       |||||||||||| |||||||    
T  16283291 gcctccgtcgtacccatatgcgc 16283313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 205
Target Start/End: Original strand, 19687740 - 19687936
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| ||||||||  |||| ||||| || ||||| ||||||| || ||||||||| |  ||||||||||||||||| |    
T  19687740 gagatggtcaccatgggaacccgtctggaagaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 19687839  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgccca 205  Q
    |||| || || || |||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||| |||| ||||| |||||||||||    
T  19687840 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagccggagccggtcaatccatggctactgttgctcctatcaatgctgccca 19687936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 8 - 202
Target Start/End: Complemental strand, 22081446 - 22081252
Alignment:
Q  8 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtac 107  Q
    |||||||| || |||||| || ||  ||||||| ||| ||||||| ||||||||||| || || | |  ||||||||| ||||||||||||| || |||     
T  22081446 tgagatggtcaccatgggaacccgcttagaagaggctgtcagagatggcattattgtgtttgaaaaatgtgaatcctctgcaaatgcatcaaggaagtat 22081347  T
Q  108 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgc 202  Q
    || || |||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||||| ||||||| || ||||||||    
T  22081346 ggcaatggtcatcataagaagaaagagacagaagtagggatggtatctgccggaaccagtcaatccatggctactgttgcccccatcaatgctgc 22081252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 205
Target Start/End: Original strand, 16277196 - 16277392
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| ||||||||  |||| ||||| || ||||| ||||||| || ||||||||| |  ||||||||||||||||| |    
T  16277196 gagatggtcaccatgggaactcgtctggaagaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 16277295  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgccca 205  Q
    |||| || || || |||||||||||||| |||||||||||||| || || |||||||||||||||||||||||| |||| ||||| ||||| |||||    
T  16277296 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 16277392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 9 - 205
Target Start/End: Original strand, 14557269 - 14557465
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| ||||||||  |||| || || || ||||| ||||||| || ||||||||| |  ||||||||||||||||| |    
T  14557269 gagatggtcaccatgggaactcgtctggaagaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 14557368  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgccca 205  Q
    |||| || || || |||||||||||||| |||||||||||||| || || |||||||||||||||||||||||| | || ||||| ||||| |||||    
T  14557369 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgtcgctcctatcaatgcagccca 14557465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 205
Target Start/End: Complemental strand, 2137832 - 2137636
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| ||| | || ||||| ||||||| || ||||||||| |  ||||||||||||||||| |    
T  2137832 gagatggtcaccatgggaacccgtctggaggaagccgtcagggaatgaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 2137733  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgccca 205  Q
    |||| || || || |||||||||||||| |||||||||||||| || || |||||||||||||||||||||||| |||| ||||| ||||| |||||    
T  2137732 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 2137636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 205
Target Start/End: Complemental strand, 27609478 - 27609282
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| || |||||  |||| || || || ||||| ||||||| ||  |||||||| |  ||||||||||||||||| |    
T  27609478 gagatggtcaccatgggaactcgtctggaggaagccgtcagggatggaatcattgtgttcgagaaagccgaatcctctgtgaatgcatcaaagaggtatg 27609379  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgccca 205  Q
    |||| || || || |||||||||||||| ||| |||||||||| || || |||||||||||||||||||||||| |||| ||||| ||||| |||||    
T  27609378 gtaatggacaccacaagaagaaagaaacggaaatagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 27609282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 18710228 - 18710418
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| ||||||| || ||||||||| |  |||||||| |||||||| |    
T  18710228 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 18710327  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| || ||||| || || |||||||||||||| ||||||||  |||| ||||| |||||    
T  18710328 gtaatggacaccacaagaagaaagaaacggaagtgggaatggtgtcagctggagccggtcaatcaatggctaccgttgctcctatcaatgc 18710418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 19674080 - 19674270
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || |||||||| ||||||| || |||||| || || | ||| || |||||||| |    
T  19674080 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaattattgtgttcgagaaagctgaatcttctgcgagtgcgtcgaagaggtatg 19674179  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    |||| || ||||| |||||||||||||| || || |||||||| || || |||||| ||||||||||||||||  |||| ||||| |||||    
T  19674180 gtaatggacatcacaagaagaaagaaacggacgtggggatggtgtcagctggagccagtcaatccatggctaccgttgctcctatcaatgc 19674270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 93 - 205
Target Start/End: Original strand, 31354250 - 31354362
Alignment:
Q  93 gcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgccccta 192  Q
    ||||| |||||||| ||||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||||||||| ||  |||| ||||    
T  31354250 gcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtatcagctggagccggtcaatccatggccaccgttgctccta 31354349  T
Q  193 ttaatgctgccca 205  Q
    | ||||| |||||    
T  31354350 tcaatgcagccca 31354362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 19208850 - 19208743
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccct 191  Q
    |||||| |||| ||||||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||||||| |||| |||    
T  19208850 tgcatcgaagaagtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcct 19208751  T
Q  192 attaatgc 199  Q
    || |||||    
T  19208750 atcaatgc 19208743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 77 - 199
Target Start/End: Complemental strand, 31490255 - 31490133
Alignment:
Q  77 tgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatg 176  Q
    ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| |||    
T  31490255 tgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaactgaagtggggatggtgtcagctggagccggtcaatcaatg 31490156  T
Q  177 gctactcttgcccctattaatgc 199  Q
    |||||| |||||||||| |||||    
T  31490155 gctactgttgcccctatcaatgc 31490133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 92 - 181
Target Start/End: Complemental strand, 28362445 - 28362356
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctac 181  Q
    |||||| ||||| || ||||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||||||||||||    
T  28362445 tgcatcgaagagatatggtaatggacaccacaagaagaaagaaactgaagtggggatggtatcagctggagccggtcaatccatggctac 28362356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 99 - 199
Target Start/End: Original strand, 19286197 - 19286297
Alignment:
Q  99 aagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatg 198  Q
    |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||||||||| ||| |||| ||||| ||||    
T  19286197 aagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcgggagccggtcaatccatggccactgttgctcctatcaatg 19286296  T
Q  199 c 199  Q
    |    
T  19286297 c 19286297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 21 - 180
Target Start/End: Complemental strand, 3330080 - 3329921
Alignment:
Q  21 atggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatc 120  Q
    ||||| |||||||| || |||||  |||| || || || ||||| || |||| || ||||||||| |  ||||| || ||||| || ||||| || || |    
T  3330080 atgggaactcgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacacc 3329981  T
Q  121 ataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggcta 180  Q
    | |||||||||||||| ||||| |||||||| || || ||||||||||||||||||||||    
T  3329980 acaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatccatggcta 3329921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 199
Target Start/End: Original strand, 29828967 - 29829145
Alignment:
Q  21 atggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatc 120  Q
    ||||| || ||||| || |||||  ||||||| || || ||||| || |||| || ||||||||| |  ||||| || ||||| || ||||| || || |    
T  29828967 atgggaacccgtcttgaggaagccgtcagagatggaatcattgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacacc 29829066  T
Q  121 ataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    | |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||||||  |||| ||||| |||||    
T  29829067 acaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctaccgttgctcctatcaatgc 29829145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 199
Target Start/End: Complemental strand, 19518665 - 19518526
Alignment:
Q  60 attgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || |||| || ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  19518665 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 19518566  T
Q  160 gagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    ||||||||||||| ||| ||||| |||| ||||| |||||    
T  19518565 gagccggtcaatcaatgactactgttgctcctatcaatgc 19518526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 77 - 199
Target Start/End: Original strand, 33258433 - 33258555
Alignment:
Q  77 tgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatg 176  Q
    ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||| ||||| |||    
T  33258433 tgaatcctctgtgaatgcgtcgaagagatatggtaatgggcaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccgggcaatcaatg 33258532  T
Q  177 gctactcttgcccctattaatgc 199  Q
    |||||| |||| ||||| |||||    
T  33258533 gctactgttgctcctatcaatgc 33258555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 12093306 - 12093116
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  ||||||| || || ||||| || |||| || |||||| ||  | | |||||| ||||| || |    
T  12093306 gagatggtcaccatgggaacccgtcttgaggaagcagtcagagatgggatcattgtgtttgagaaagctgaatcttctacgagtgcatcgaagagatatg 12093207  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| || ||||| || || | |||||| ||||| ||||||||| |||| ||||| |||||    
T  12093206 gtaatggacaccacaagaagaaagaaacggaagtgggaatggtgtcagctgcagccggccaatctatggctactattgctcctatcaatgc 12093116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 103; Significance: 2e-51; HSPs: 3)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 9 - 231
Target Start/End: Original strand, 29405 - 29627
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| ||||||||  |||| ||||| || ||||| ||||| | || ||||||||| |  ||||||||||||||||| |    
T  29405 gagatggtcaccatgggaactcgtctggaagaagccgtcagggaaggaatcattgtgttcgaaaaagctgaatcctctgtgaatgcatcaaagaggtatg 29504  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgcccagtt 208  Q
    ||||||| || || |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||  |    
T  29505 gtaacggacaccacaagaagaaagaaacggaagtagggatggtgtctgccggagccggtcaatccatggctactgttgctcctattaatgctgcccaaat 29604  T
Q  209 atttccgtcgtacccgtatgcgc 231  Q
       ||| ||||||||||||||||    
T  29605 gcctccatcgtacccgtatgcgc 29627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 205
Target Start/End: Complemental strand, 40683 - 40487
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| || |||||  |||| ||||| || ||||| ||||||| || ||||||||| |  ||||||||||||||||| |    
T  40683 gagatggtcaccatgggaactcgtctggaggaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 40584  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgccca 205  Q
    ||||||| || || |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||| ||||| ||||| |||||    
T  40583 gtaacggacaccacaagaagaaagaaacggaagtagggatggtgtctgccggagccggtcaatccatggctactgttgctcctatcaatgcagccca 40487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 205
Target Start/End: Complemental strand, 47599 - 47403
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| ||||||||  |||| || || || ||||| ||||||| || |||||||||||  ||||||||||||||||| |    
T  47599 gagatggtcaccatgggaacccgtctggaagaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctccgtgaatgcatcaaagaggtatg 47500  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgccca 205  Q
    |||| || || || |||||||||||||| ||| |||||||||| || || |||||||||||| ||||||||||| |||| | ||| ||||| |||||    
T  47499 gtaatggacaccacaagaagaaagaaacggaaatagggatggtgtcagctggagccggtcaacccatggctactgttgctcttatcaatgcagccca 47403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 8 - 200
Target Start/End: Original strand, 21208 - 21400
Alignment:
Q  8 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtac 107  Q
    |||||||| || |||||| || ||  ||||||| ||| ||||||| || |||||||| || |||| || ||||||||| ||||||||||||| || |||     
T  21208 tgagatggtcaccatgggaacccgcttagaagaggctgtcagagacggaattattgtgtttgagaaaggtgaatcctctgcaaatgcatcaaggaagtat 21307  T
Q  108 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgct 200  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||| |||||||| ||||||| || ||||||    
T  21308 ggtaatggtcatcataagaagaaagagacagaagtagggatggtatctgccggaaccagtcaatccgtggctactgttgcccccatcaatgct 21400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 205
Target Start/End: Original strand, 26934 - 27130
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| ||||||||  |||| || || || ||||| ||||||| || ||||||||| |  ||||||||||||||||| |    
T  26934 gagatggtcaccatgggaactcgtctggaagaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 27033  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgccca 205  Q
    |||| || || || |||||||||||||| |||||||||||||| || || |||||||||||||||||||||||| |||| ||||| ||||| |||||    
T  27034 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 27130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 3e-38; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 205
Target Start/End: Complemental strand, 13299508 - 13299312
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| ||||||||  |||| || || || ||||| ||||||| || ||||||||| |  |||||||||||||| || |    
T  13299508 gagatggtcaccatgggaactcgtctggaagaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagagatatg 13299409  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgccca 205  Q
    |||| || || || |||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||| |||| ||||| ||||| |||||    
T  13299408 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtctgccggagctggtcaatccatggctactgttgctcctatcaatgcagccca 13299312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 205
Target Start/End: Complemental strand, 22935434 - 22935238
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| ||||||||  |||| ||||| || ||||| ||||||| || ||||||||| |  ||||||||||||||||| |    
T  22935434 gagatggtcaccatgggaactcgtctggaagaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 22935335  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgccca 205  Q
    ||||||| || || |||||||||||||| ||| |||||||||| || ||||| ||||||||||||||| ||||| |||| ||||| ||||| |||||    
T  22935334 gtaacggacaccacaagaagaaagaaacggaaatagggatggtgtcagccggggccggtcaatccatgactactgttgctcctatcaatgcagccca 22935238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 205
Target Start/End: Complemental strand, 23857879 - 23857683
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| ||||||||  |||| ||||| || ||||| ||||||| || ||||||||| |  ||||||||||||||||| |    
T  23857879 gagatggtcaccatgggaactcgtctggaagaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 23857780  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgccca 205  Q
    ||||||| || || |||||||||||||| ||| |||||||||| || ||||| ||||||||||||||| ||||| |||| ||||| ||||| |||||    
T  23857779 gtaacggacaccacaagaagaaagaaacggaaatagggatggtgtcagccggggccggtcaatccatgactactgttgctcctatcaatgcagccca 23857683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 205
Target Start/End: Original strand, 24863356 - 24863552
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||| | |||||||| || |||||  |||| ||||| || ||||| ||||||| || ||||||||| |  ||||||||||||||||| |    
T  24863356 gagatggtcaccatgagaactcgtctggaggaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 24863455  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgccca 205  Q
    |||| || || || |||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||| |||| ||||| ||||| |||||    
T  24863456 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagccggagccggtcaatccatggctactgttgctcctatcaatgcagccca 24863552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 8 - 200
Target Start/End: Original strand, 20160345 - 20160534
Alignment:
Q  8 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtac 107  Q
    |||||||| || |||||| || ||||||||||||||| |||| ||||| || ||||| || || | || |||||||||||  |  ||| |||| ||||||    
T  20160345 tgagatggtcaccatgggaacccgtctagaagaagctgtcagggaaggaatcattgtgtttgataaaggtgaatcctccgtgagcgcaccaaaaaggtac 20160444  T
Q  108 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgct 200  Q
    ||||||||||||||||||||||| ||||||||||||||||||| || |||    ||||||||||||||||||||| |||||||| ||||||||    
T  20160445 ggtaacggtcatcataagaagaaggaaacagaagtagggatggaatttgc---tgccggtcaatccatggctactgttgcccctgttaatgct 20160534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 8 - 200
Target Start/End: Complemental strand, 22172486 - 22172297
Alignment:
Q  8 tgagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtac 107  Q
    |||||||| || |||||| || ||||||||||||||| |||| ||||| || ||||| || || | || |||||||||||  |  ||| |||| ||||||    
T  22172486 tgagatggtcaccatgggaacccgtctagaagaagctgtcagggaaggaatcattgtgtttgataaaggtgaatcctccgtgagcgcaccaaaaaggtac 22172387  T
Q  108 ggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgct 200  Q
    ||||||||||||||||||||||| ||||||||||||||||||| || |||    ||||||||||||||||||||| |||||||| ||||||||    
T  22172386 ggtaacggtcatcataagaagaaggaaacagaagtagggatggaatttgc---tgccggtcaatccatggctactgttgcccctgttaatgct 22172297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 9 - 205
Target Start/End: Complemental strand, 15424874 - 15424678
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| || |||||  |||| ||||| || ||||| ||||||| || |||||| || |  ||||||||||||||||| |    
T  15424874 gagatggtcaccatgggaactcgtctggaggaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcttctgtgaatgcatcaaagaggtatg 15424775  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgccca 205  Q
    |||| || || || |||||||||||||| |||||||||||||| || || |||||||||||||||||||||||| |||| ||||| ||||| |||||    
T  15424774 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 15424678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 9 - 205
Target Start/End: Original strand, 26988640 - 26988836
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| |||||||| ||||||||  |||| || || || ||||| ||||||| || ||||||||| |  |||||||| |||||||| |    
T  26988640 gagatggtcaccatgggaactcgtctggaagaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 26988739  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgccca 205  Q
    |||| || || || |||||||||||||| |||||||||||||| || || |||||||||||||||||||||||| |||| ||||| ||||| |||||    
T  26988740 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 26988836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 9 - 205
Target Start/End: Original strand, 26999712 - 26999908
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| ||||| || ||||| ||||||| || ||||||||| |  ||||||||||||||||| |    
T  26999712 gagatggtcaccatgggaacccgtctggaggaagccgtcagggaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatg 26999811  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgccca 205  Q
    |||| || || || |||||||||||||| |||||||||||||| || || |||||||||||||||||||||||| |||| ||||| ||||| |||||    
T  26999812 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctatcaatgcagccca 26999908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 60 - 205
Target Start/End: Complemental strand, 24305124 - 24304979
Alignment:
Q  60 attgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| ||||||| || ||||||||| |  ||||||||||||||||| ||||| || || || |||||||||||||| |||||||||||||| || || |    
T  24305124 attgtgttcgagaaagctgaatcctctgtgaatgcatcaaagaggtatggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctg 24305025  T
Q  160 gagccggtcaatccatggctactcttgcccctattaatgctgccca 205  Q
    ||||||||||||||||||||||| | || ||||| |||||||||||    
T  24305024 gagccggtcaatccatggctactgtcgctcctatcaatgctgccca 24304979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 26918070 - 26918209
Alignment:
Q  60 attgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| ||||||| || ||||||||| |  |||||||| |||||||| ||||| || || || |||||||||||||| |||||||||||||| || || |    
T  26918070 attgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctg 26918169  T
Q  160 gagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    ||||||||||||||||||||||| |||| ||||| |||||    
T  26918170 gagccggtcaatccatggctactgttgctcctatcaatgc 26918209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 193
Target Start/End: Original strand, 16749493 - 16749677
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| ||||||| || ||||||||| |  | |||||| |||||||| |    
T  16749493 gagatggtcaccatgggaacccgtctggaggaagccgtcagggatgggatcattgtgttcgagaaagctgaatcctctgtgagtgcatcgaagaggtatg 16749592  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctat 193  Q
    |||| || || || |||||||||||||| |||||||||||||| || || |||||||||||||||||||||||| |||| |||||    
T  16749593 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcagctggagccggtcaatccatggctactgttgctcctat 16749677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 29549117 - 29549307
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || |||| || ||||||||| |  | |||||| |||||||| |    
T  29549117 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtgagtgcatcgaagaggtatg 29549216  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    |||| || ||||| |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||||||  |||| ||||| |||||    
T  29549217 gtaatggacatcacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatctatggctaccgttgctcctatcaatgc 29549307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 205
Target Start/End: Original strand, 27044029 - 27044225
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || |||| || ||||||||| |  | |||||| ||||| || |    
T  27044029 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtgagtgcatcgaagagatatg 27044128  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgccca 205  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||||||||||||  |||| ||||| ||||| |||||    
T  27044129 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatccatggctaccgttgctcctatcaatgcagccca 27044225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 199
Target Start/End: Original strand, 4525011 - 4525118
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccct 191  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||||||| |||| |||    
T  4525011 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatctatggctactgttgcacct 4525110  T
Q  192 attaatgc 199  Q
    || |||||    
T  4525111 atcaatgc 4525118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 199
Target Start/End: Original strand, 4757483 - 4757590
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccct 191  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || ||||||||||||||||| ||||||||| | || |||    
T  4757483 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagccggagccggtcaatcaatggctactgtcgctcct 4757582  T
Q  192 attaatgc 199  Q
    || |||||    
T  4757583 atcaatgc 4757590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 199
Target Start/End: Original strand, 29572735 - 29572842
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccct 191  Q
    |||||| || ||||||||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||||||| |||| |||    
T  29572735 tgcatcgaaaaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcct 29572834  T
Q  192 attaatgc 199  Q
    || |||||    
T  29572835 atcaatgc 29572842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 3695702 - 3695892
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || |||| || ||||||||| |  |||||||| ||||| || |    
T  3695702 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtgaatgcatcgaagagatatg 3695801  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||||||  |||| ||||| |||||    
T  3695802 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctaccgttgctcctatcaatgc 3695892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 92 - 181
Target Start/End: Complemental strand, 30558490 - 30558401
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctac 181  Q
    |||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||||||||||||    
T  30558490 tgcatcgaagaggtatggtaatggacaccacaagaagaaagaaactgaagtggggatggtgtcagctggagccggtcaatccatggctac 30558401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 9 - 205
Target Start/End: Original strand, 17024901 - 17025097
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || |||| ||  |||||||| |  |||||||| |||||||| |    
T  17024901 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagccgaatcctctgtgaatgcatcgaagaggtatg 17025000  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgctgccca 205  Q
    |||| || || || |||||||||||||| ||||| || ||||| || || |||||||||||| | ||||||||| |||| ||||| ||||| |||||    
T  17025001 gtaatggacaccacaagaagaaagaaacggaagtgggaatggtgtcagctggagccggtcaagctatggctactgttgctcctatcaatgcagccca 17025097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 92 - 199
Target Start/End: Original strand, 4772719 - 4772826
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccct 191  Q
    |||||| ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || ||||||||||||||||| ||||||||  |||| |||    
T  4772719 tgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagccggagccggtcaatctatggctaccgttgctcct 4772818  T
Q  192 attaatgc 199  Q
    || |||||    
T  4772819 atcaatgc 4772826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 92 - 199
Target Start/End: Original strand, 27007434 - 27007541
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccct 191  Q
    |||||| ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||||||| |||| |||    
T  27007434 tgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcct 27007533  T
Q  192 attaatgc 199  Q
    || |||||    
T  27007534 atcaatgc 27007541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 92 - 199
Target Start/End: Original strand, 27484839 - 27484946
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccct 191  Q
    |||||| ||||| |||||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||||||  |||| |||    
T  27484839 tgcatcgaagagatacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctaccgttgctcct 27484938  T
Q  192 attaatgc 199  Q
    || |||||    
T  27484939 atcaatgc 27484946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 166 - 232
Target Start/End: Complemental strand, 22477673 - 22477607
Alignment:
Q  166 gtcaatccatggctactcttgcccctattaatgctgcccagttatttccgtcgtacccgtatgcgca 232  Q
    ||||||||||||||||| ||||||| |||||||||||||| |||  || ||||||||||||||||||    
T  22477673 gtcaatccatggctactgttgccccaattaatgctgcccaattacctctgtcgtacccgtatgcgca 22477607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 199
Target Start/End: Original strand, 29501126 - 29501235
Alignment:
Q  90 aatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgccc 189  Q
    ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||||||||||||  |||| |    
T  29501126 aatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatccatggctaccgttgctc 29501225  T
Q  190 ctattaatgc 199  Q
    |||| |||||    
T  29501226 ctatcaatgc 29501235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 193
Target Start/End: Complemental strand, 26778100 - 26778000
Alignment:
Q  93 gcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgccccta 192  Q
    ||||| |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||| ||||| ||||||||| |||| ||||    
T  26778100 gcatcgaagaggtatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccgggcaatcaatggctactgttgcaccta 26778001  T
Q  193 t 193  Q
    |    
T  26778000 t 26778000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 27360484 - 27360377
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccct 191  Q
    |||||| ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||||||  |||| |||    
T  27360484 tgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatctatggctaccgttgctcct 27360385  T
Q  192 attaatgc 199  Q
    || |||||    
T  27360384 atcaatgc 27360377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 27450827 - 27450720
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccct 191  Q
    |||||| ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||||||  |||| |||    
T  27450827 tgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatctatggctaccgttgctcct 27450728  T
Q  192 attaatgc 199  Q
    || |||||    
T  27450727 atcaatgc 27450720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 199
Target Start/End: Complemental strand, 34463867 - 34463728
Alignment:
Q  60 attgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || |||| || ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  34463867 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctg 34463768  T
Q  160 gagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    ||||||||||||| ||| ||||| |||| ||||| |||||    
T  34463767 gagccggtcaatcaatgactactgttgctcctatcaatgc 34463728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 4546341 - 4546151
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  ||||||| || || ||||| || |||| || |||||| ||  | | |||||| |||||||| |    
T  4546341 gagatggtcaccatgggaacccgtcttgaggaagcagtcagagatgggatcattgtgtttgagaaagctgaatcttctacgagtgcatcgaagaggtatg 4546242  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| || ||||| || || | |||||||||||| ||||||||  |||| ||||| |||||    
T  4546241 gtaatggacaccacaagaagaaagaaacggaagtgggaatggtgtcagctgcagccggtcaatctatggctaccgttgctcctatcaatgc 4546151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 77 - 199
Target Start/End: Complemental strand, 16944516 - 16944394
Alignment:
Q  77 tgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatg 176  Q
    ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||| ||||| |||    
T  16944516 tgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccgggcaatcaatg 16944417  T
Q  177 gctactcttgcccctattaatgc 199  Q
    |||||| |||| ||||| |||||    
T  16944416 gctactgttgctcctatcaatgc 16944394  T

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Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 28207081 - 28207271
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  ||||||| || || ||||| || |||| || |||||| ||  | | |||||| |||||||| |    
T  28207081 gagatggtcaccatgggaacccgtcttgaggaagcagtcagagatgggatcattgtgtttgagaaagctgaatcttctacgagtgcatcgaagaggtatg 28207180  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| || ||||| || || | |||||||||||| ||||||||  |||| ||||| |||||    
T  28207181 gtaatggacaccacaagaagaaagaaacggaagtgggaatggtgtcagctgcagccggtcaatctatggctaccgttgctcctatcaatgc 28207271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 181
Target Start/End: Complemental strand, 26116893 - 26116804
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctac 181  Q
    |||||| ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| || |||||    
T  26116893 tgcatcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatctatagctac 26116804  T

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Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 4724617 - 4724510
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccct 191  Q
    |||||| || ||||| ||||| || || || |||||||||||||| ||||| || ||||| || || | |||||||||||| ||||||||  |||| |||    
T  4724617 tgcatcgaaaaggtatggtaatggacaccacaagaagaaagaaacggaagtgggaatggtgtcagctgcagccggtcaatctatggctaccgttgctcct 4724518  T
Q  192 attaatgc 199  Q
    || |||||    
T  4724517 atcaatgc 4724510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 16673817 - 16673956
Alignment:
Q  60 attgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || |||| || ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| || ||||| || || |    
T  16673817 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagtgggaatggtgtcagctg 16673916  T
Q  160 gagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    ||||||||||||| || |||||  |||| ||||| |||||    
T  16673917 gagccggtcaatcaatagctaccgttgctcctatcaatgc 16673956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 744 - 554
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| ||||||||  |||| || || || ||||| ||||||| || ||||||||| |  |||||||| |||||||| |    
T  744 gagatggtcaccatgggaacccgtctggaagaagccgtcagggatggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 645  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| |||||||||||||| ||  | |||||||||||||||||||||||| |||| ||||| |||||    
T  644 gtaatggacaccacaagaagaaagaaacggaagtagggatggtgtcaactggagccggtcaatccatggctactgttgctcctatcaatgc 554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0336 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0336
Description:

Target: scaffold0336; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 7874 - 8064
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || |||| || ||||||||| |  |||||||| |||||||| |    
T  7874 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtgaatgcatcgaagaggtatg 7973  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| ||||||||||| || ||||||||||||||  |||||||| |||| ||||| |||||    
T  7974 gtaatggacaccacaagaagaaagaaacggaagtggggatggtatcagctggagccggtcaatctgtggctactgttgctcctatcaatgc 8064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 203
Target Start/End: Complemental strand, 48769 - 48568
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatc-aaagaggtac 107  Q
    ||||||| || |||||| |||||||| ||||||||  |||||||||| || ||||| ||||||| || ||||||||| |  |||||||| |||||||||     
T  48769 gagatggtcaccatgggaactcgtctggaagaagccgtcagagaaggaatcattgtgttcgagaaagctgaatcctctgtgaatgcatcaaaagaggtat 48670  T
Q  108 ggtaac-ggtcatcataagaagaaagaaacagaagta-gggatggtatc-tgccggagccgg--tcaatccatggcta-ctcttgcccctattaatgctg 201  Q
    |||||| || || || |||||||||||||| |||||| |||||||| || ||||||||||||   ||||||||||||| || |||| ||||| |||||||    
T  48669 ggtaacgggacaccacaagaagaaagaaacggaagtaggggatggtgtcttgccggagccgggtccaatccatggctacctgttgctcctatcaatgctg 48570  T
Q  202 cc 203  Q
    ||    
T  48569 cc 48568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0350 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 7770 - 7663
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccct 191  Q
    |||||| |||||||||||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||||||| |||| |||    
T  7770 tgcatcgaagaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcct 7671  T
Q  192 attaatgc 199  Q
    || |||||    
T  7670 atcaatgc 7663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 26816 - 26626
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  |||| || || || ||||| || |||| || ||||||||| | |||||| || ||||| || |    
T  26816 gagatggtcaccatgggaacccgtcttgaggaagccgtcagggatggaatcattgtgtttgagaaagctgaatcctctgtaaatgcgtcgaagagatatg 26717  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||| ||||||||| |||| ||||| |||||    
T  26716 gtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagctggagccggtcaatcaatggctactgttgctcctatcaatgc 26626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 187
Target Start/End: Complemental strand, 15461 - 15366
Alignment:
Q  92 tgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgc 187  Q
    |||||| || ||||||||||| || || || |||||||||||||| ||||| ||||||||||| || |||||||||||||| ||||||||| ||||    
T  15461 tgcatcgaaaaggtacggtaatggacaccacaagaagaaagaaacggaagtggggatggtatcagctggagccggtcaatcaatggctactgttgc 15366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 181
Target Start/End: Complemental strand, 9593 - 9508
Alignment:
Q  96 tcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctac 181  Q
    |||||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |||||||||||||||||||||||    
T  9593 tcaaagagatatggtaatggacaccacaagaagaaagaaacggaagtggggatggtgtcagcgggagccggtcaatccatggctac 9508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 7579 - 7769
Alignment:
Q  9 gagatggacatcatggggactcgtctagaagaagctatcagagaaggcattattgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacg 108  Q
    ||||||| || |||||| || ||||| || |||||  ||||||| || || ||||| || |||| || |||||| ||  | | |||||| |||||||| |    
T  7579 gagatggtcaccatgggaacccgtcttgaggaagcagtcagagatgggatcattgtgtttgagaaagctgaatcttctacgagtgcatcgaagaggtatg 7678  T
Q  109 gtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccggagccggtcaatccatggctactcttgcccctattaatgc 199  Q
    |||| || || || |||||||||||||| ||||| || ||||| || || | |||||||||||| ||||||||  |||| ||||| |||||    
T  7679 gtaatggacaccacaagaagaaagaaacggaagtgggaatggtgtcagctgcagccggtcaatctatggctaccgttgctcctatcaatgc 7769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 199
Target Start/End: Original strand, 5682 - 5821
Alignment:
Q  60 attgtattcgagacagttgaatcctccgcaaatgcatcaaagaggtacggtaacggtcatcataagaagaaagaaacagaagtagggatggtatctgccg 159  Q
    ||||| || |||| || ||||||||| |  ||||| || ||||| || ||||| || || || |||||||||||||| ||||| |||||||| || || |    
T  5682 attgtgtttgagaaagctgaatcctctgtgaatgcgtcgaagagatatggtaatggacaccacaagaagaaagaaacggaagt-gggatggtgtcagctg 5780  T
Q  160 gagccggtcaatc-catggctactcttgcccctattaatgc 199  Q
    |||||||||||||  ||||||||| |||| ||||| |||||    
T  5781 gagccggtcaatcaaatggctactgttgctcctatcaatgc 5821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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