View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8208A_low_407 (Length: 226)
Name: NF8208A_low_407
Description: NF8208A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8208A_low_407 |
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Alignment Details
Target: chr7 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 21 - 197
Target Start/End: Complemental strand, 12916356 - 12916180
Alignment:
| Q |
21 |
aacatgctcataggtaatagagacacnnnnnnntatgagcatttgaccaccacaatgctttctcagtcactaaggttaatgggatgatcaacaggagcag |
120 |
Q |
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| T |
12916356 |
aacatgctcataggtaatagagacaccaaaaaatatgagcatttgaccaccacaatgctttctcagtcactaaggttaatgggatgatcaacaggagcag |
12916257 |
T |
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| Q |
121 |
cagatggtccgtcgatccattcagcggtgttttcttcgacaaggctccttaactcattgtgtgaacccaacaccaaa |
197 |
Q |
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||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| |||| |
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| T |
12916256 |
caggtggtccgtcgatccattcagcagtgttttcttcgacaaggctccttaactcattgtgtggacccaacaacaaa |
12916180 |
T |
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