View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8208A_low_414 (Length: 225)
Name: NF8208A_low_414
Description: NF8208A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8208A_low_414 |
 | |
|
| [»] scaffold0288 (1 HSPs) |
| | |
|
| [»] scaffold0477 (1 HSPs) |
| | |
|
| [»] scaffold0475 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 149; Significance: 7e-79; HSPs: 31)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 4592598 - 4592418
Alignment:
| Q |
1 |
ggtgtcctcaagagcaagtattaaaccacccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagtatatgtgctggagttcc |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
4592598 |
ggtgtcctcaagagcaagtattaaaccacccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagtatatgtgctggaattcc |
4592499 |
T |
|
| Q |
101 |
aatgttgtgttggccattctttagtgatcagccaataaactgtagacatatttccaatgactgggcgatggggctggaaat |
181 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||| |||| ||| ||| ||||||| |
|
|
| T |
4592498 |
aatgttgtgttggccattctttagtgatcagccaacaaactgtagacttatttacaatgaatgggagattgggatggaaat |
4592418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 4564078 - 4563898
Alignment:
| Q |
1 |
ggtgtcctcaagagcaagtattaaaccacccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagtatatgtgctggagttcc |
100 |
Q |
| |
|
||||||| || ||| ||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
4564078 |
ggtgtccacaggagaaagtattgaaccacccttcaattggcggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttcc |
4563979 |
T |
|
| Q |
101 |
aatgttgtgttggccattctttagtgatcagccaataaactgtagacatatttccaatgactgggcgatggggctggaaat |
181 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||| ||||||||||| ||||| |||||| |||| ||| ||| ||||||| |
|
|
| T |
4563978 |
aatgttgtgttggccattctttggtgatcagccaacaaactgtagacttatttacaatgaatgggagattgggatggaaat |
4563898 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 9 - 179
Target Start/End: Complemental strand, 4585995 - 4585825
Alignment:
| Q |
9 |
caagagcaagtattaaaccacccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagtatatgtgctggagttccaatgttgt |
108 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||| |
|
|
| T |
4585995 |
caagagcaagtattgaaccacccttcaattggtggattcttgactcactgtggatggaactcaaccactgaaagcatatgtgctggagtgccaatgttgt |
4585896 |
T |
|
| Q |
109 |
gttggccattctttagtgatcagccaataaactgtagacatatttccaatgactgggcgatggggctggaa |
179 |
Q |
| |
|
||||||||||| || ||||||||||| |||||||||| ||||| |||||| |||| ||| ||| ||||| |
|
|
| T |
4585895 |
gttggccattcattgctgatcagccaacaaactgtagaattatttgcaatgaatgggagattgggatggaa |
4585825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 4461490 - 4461345
Alignment:
| Q |
1 |
ggtgtcctcaagagcaagtattaaaccacccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagtatatgtgctggagttcc |
100 |
Q |
| |
|
||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| || |
|
|
| T |
4461490 |
ggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgactcattgtggatggaattcaaccactgaaagcatatgtgctggagtgcc |
4461391 |
T |
|
| Q |
101 |
aatgttgtgttggccattctttagtgatcagccaataaactgtaga |
146 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
4461390 |
gatgttgtgttggccattctttggtgatcagccagcaaactgtaga |
4461345 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 9 - 158
Target Start/End: Complemental strand, 4557484 - 4557335
Alignment:
| Q |
9 |
caagagcaagtattaaaccacccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagtatatgtgctggagttccaatgttgt |
108 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |
|
|
| T |
4557484 |
caagagcaagtattaaaccatccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagcatatctgctggagttccaatgttgt |
4557385 |
T |
|
| Q |
109 |
gttggccattctttagtgatcagccaataaactgtagacatatttccaat |
158 |
Q |
| |
|
|||||||||| ||| |||||||||| |||||| ||| |||||| |||| |
|
|
| T |
4557384 |
gttggccattttttgctgatcagccagcaaactgcagatatatttgcaat |
4557335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 4613483 - 4613600
Alignment:
| Q |
1 |
ggtgtcctcaagagcaagtattaaaccacccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagtatatgtgctggagttcc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |
|
|
| T |
4613483 |
ggtgtcctcaagagcaagtattaaaccacccttcaattggcggattcttgactcattgtggatggaactcaaccactgaaagcatatgtgctggagtgcc |
4613582 |
T |
|
| Q |
101 |
aatgttgtgttggccatt |
118 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
4613583 |
aatgttgtgttggccatt |
4613600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 4470170 - 4470006
Alignment:
| Q |
1 |
ggtgtcctcaagagcaagtattaaaccacccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagtatatgtgctggagttcc |
100 |
Q |
| |
|
|||||||||||||||||||| | |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||| || |
|
|
| T |
4470170 |
ggtgtcctcaagagcaagtactgaaccacccttcaatcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgcgctggagtgcc |
4470071 |
T |
|
| Q |
101 |
aatgttgtgttggccattctttagtgatcagccaataaactgtagacatatttccaatgactggg |
165 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| | ||| |||||| ||||| |||||| |||| |
|
|
| T |
4470070 |
aatgttgtgttggccattctttggtgatcagctagcaaattgtagatttatttgcaatgaatggg |
4470006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 4266931 - 4267076
Alignment:
| Q |
1 |
ggtgtcctcaagagcaagtattaaaccacccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagtatatgtgctggagttcc |
100 |
Q |
| |
|
||||||| ||||| |||| || ||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||| || |
|
|
| T |
4266931 |
ggtgtccacaagataaagtgttgaaccacccttcgattggtggattcttgactcattgcggatggaattcaaccactgaaagcatatgtgctggagtgcc |
4267030 |
T |
|
| Q |
101 |
aatgttgtgttggccattctttagtgatcagccaataaactgtaga |
146 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||| |||||||||| |
|
|
| T |
4267031 |
aatgttgtgttggccattctttggtgatcagccaacaaactgtaga |
4267076 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 4506216 - 4506065
Alignment:
| Q |
9 |
caagagcaagtattaaaccacccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagtatatgtgctggagttccaatgttgt |
108 |
Q |
| |
|
|||||| |||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||| |||||| ||| |
|
|
| T |
4506216 |
caagagaaagtgttaaatcacccttcaattggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgcgctggagtgccaatgctgt |
4506117 |
T |
|
| Q |
109 |
gttggccattctttagtgatcagccaataaactgtagacatatttccaatga |
160 |
Q |
| |
|
||||||| |||||| ||||||| |||| |||||||||| ||||| |||||| |
|
|
| T |
4506116 |
gttggccgttctttggtgatcaaccaacaaactgtagatttatttgcaatga |
4506065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 4560873 - 4560714
Alignment:
| Q |
1 |
ggtgtcctcaagagcaagtattaaaccacccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagtatatgtgctggagttcc |
100 |
Q |
| |
|
||||||| |||||| ||||||| |||||||| ||| | |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
4560873 |
ggtgtccacaagagaaagtattgaaccacccatcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttcc |
4560774 |
T |
|
| Q |
101 |
aatgttgtgttggccattctttagtgatcagccaataaactgtagacatatttccaatga |
160 |
Q |
| |
|
|||||||||||||||||| ||| ||||||||| |||||| ||| |||||| |||||| |
|
|
| T |
4560773 |
aatgttgtgttggccattttttgcagatcagccagcaaactgaagatatatttgcaatga |
4560714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 4579799 - 4579682
Alignment:
| Q |
1 |
ggtgtcctcaagagcaagtattaaaccacccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagtatatgtgctggagttcc |
100 |
Q |
| |
|
||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||| |||||||||||| |
|
|
| T |
4579799 |
ggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgactcattgcggatggaactcaatcactgaaagcatatctgctggagttcc |
4579700 |
T |
|
| Q |
101 |
aatgttgtgttggccatt |
118 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
4579699 |
aatgttgtgttggccatt |
4579682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 4574675 - 4574511
Alignment:
| Q |
1 |
ggtgtcctcaagagcaagtattaaaccacccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagtatatgtgctggagttcc |
100 |
Q |
| |
|
||||||| |||||| ||||||| ||||||| |||| | |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
4574675 |
ggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttcc |
4574576 |
T |
|
| Q |
101 |
aatgttgtgttggccattctttagtgatcagccaataaactgtagacatatttccaatgactggg |
165 |
Q |
| |
|
|||||| ||||||||||| ||| ||||||||| |||||| ||| |||||| |||||| |||| |
|
|
| T |
4574575 |
aatgttatgttggccatttttttcggatcagccagcaaactgcagatatatttgcaatgaatggg |
4574511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 4622509 - 4622359
Alignment:
| Q |
1 |
ggtgtcctcaagagcaagtattaaaccacccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagtatatgtgctggagttcc |
100 |
Q |
| |
|
||||||| |||||| ||||| | ||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||| | |
|
|
| T |
4622509 |
ggtgtccacaagaggaagtacttaaccaccctgcaattggtggattcttgactcattgtggatggaattcaaccaccgaaagcatatgtgctggagtttc |
4622410 |
T |
|
| Q |
101 |
aatgttgtgttggccattctttagtgatcagccaataaactgtagacatat |
151 |
Q |
| |
|
|||| ||||||||||||| || ||||||||||| |||||||||| |||| |
|
|
| T |
4622409 |
aatgctgtgttggccatttttcgctgatcagccaacaaactgtagatatat |
4622359 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 4481060 - 4480939
Alignment:
| Q |
1 |
ggtgtcctcaagagcaagtattaaaccacccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagtatatgtgctggagttcc |
100 |
Q |
| |
|
||||||| |||||| |||| || |||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| || |
|
|
| T |
4481060 |
ggtgtccacaagagaaagttttgaaccacccttcaatcggcggattcttgactcattgcggatggaactcaaccactgaaagtgtatgtgctggagtgcc |
4480961 |
T |
|
| Q |
101 |
aatgttgtgttggccattcttt |
122 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
4480960 |
aatgttgtgttggccattcttt |
4480939 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 4514886 - 4515050
Alignment:
| Q |
1 |
ggtgtcctcaagagcaagtattaaaccacccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagtatatgtgctggagttcc |
100 |
Q |
| |
|
||||||| |||||| |||| || ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| || ||||| |||||||| || |
|
|
| T |
4514886 |
ggtgtccacaagagaaagttttgaaccacccttcaattggcggattcttgactcattgcggatggaactcaaccactgagagcatatgcgctggagtgcc |
4514985 |
T |
|
| Q |
101 |
aatgttgtgttggccattctttagtgatcagccaataaactgtagacatatttccaatgactggg |
165 |
Q |
| |
|
|||| | ||||||| ||||||| ||||||| |||| |||||||||| ||||| |||||| |||| |
|
|
| T |
4514986 |
aatgctttgttggcaattctttggtgatcaaccaacaaactgtagatttatttgcaatgaatggg |
4515050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 4626318 - 4626154
Alignment:
| Q |
1 |
ggtgtcctcaagagcaagtattaaaccacccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagtatatgtgctggagttcc |
100 |
Q |
| |
|
||||||| |||||| ||||| | ||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||| ||||||||||| |
|
|
| T |
4626318 |
ggtgtccgcaagagaaagtactgaaccatccttcaattggtggattcttaactcattgtggatggaactcaaccattgaaagcatatgcgctggagttcc |
4626219 |
T |
|
| Q |
101 |
aatgttgtgttggccattctttagtgatcagccaataaactgtagacatatttccaatgactggg |
165 |
Q |
| |
|
|||| ||||||||||| ||| ||||||||||| ||| |||||| |||||| |||||| |||| |
|
|
| T |
4626218 |
aatgctgtgttggccaaattttgctgatcagccaacaaattgtagatatatttgcaatgaatggg |
4626154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 9 - 112
Target Start/End: Complemental strand, 4598530 - 4598427
Alignment:
| Q |
9 |
caagagcaagtattaaaccacccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagtatatgtgctggagttccaatgttgt |
108 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
4598530 |
caagagcaagtattaaaccatccttcaattggtggattcttaactcattgcggatggaactcaaccactgaaagtatatgtgccggagtgccaatgttgt |
4598431 |
T |
|
| Q |
109 |
gttg |
112 |
Q |
| |
|
|||| |
|
|
| T |
4598430 |
gttg |
4598427 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 4256376 - 4256522
Alignment:
| Q |
1 |
ggtgtcctcaagagcaagtattaaaccacccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagtatatgtgctggagttcc |
100 |
Q |
| |
|
||||||| |||||||||||| | |||||| ||||| |||||||||||||||||||||| |||||||||||||||| |||||| || ||||| |||||||| |
|
|
| T |
4256376 |
ggtgtccgcaagagcaagtactgaaccactcttcagttggtggattcttgactcattgaggatggaactcaaccattgaaagcatttgtgccggagttcc |
4256475 |
T |
|
| Q |
101 |
aatgttgtgttggccattctttagtgatcag-ccaataaactgtaga |
146 |
Q |
| |
|
|||||||||||||||||| ||| ||||||| |||| |||||||||| |
|
|
| T |
4256476 |
aatgttgtgttggccattttttgctgatcagaccaacaaactgtaga |
4256522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 4259919 - 4260064
Alignment:
| Q |
1 |
ggtgtcctcaagagcaagtattaaaccacccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagtatatgtgctggagttcc |
100 |
Q |
| |
|
||||||| |||||||||||| | |||||| ||||| ||||||||||||| |||||||| |||||||||||||||| |||||| || ||||| | |||||| |
|
|
| T |
4259919 |
ggtgtccgcaagagcaagtactgaaccactcttcagttggtggattcttaactcattgcggatggaactcaaccattgaaagcatttgtgccgaagttcc |
4260018 |
T |
|
| Q |
101 |
aatgttgtgttggccattctttagtgatcagccaataaactgtaga |
146 |
Q |
| |
|
|||||||||||||||||| ||| ||||||||||| |||||||||| |
|
|
| T |
4260019 |
aatgttgtgttggccattttttgctgatcagccaacaaactgtaga |
4260064 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 4504162 - 4504295
Alignment:
| Q |
1 |
ggtgtcctcaagagcaagtattaaaccacccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagtatatgtgctggagttcc |
100 |
Q |
| |
|
||||||| ||||| |||| || |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| | ||||||||||| || |
|
|
| T |
4504162 |
ggtgtccacaagataaagtgttgaaccacccttcaatcggaggattcttgactcattgtggatggaactcaaccactgaaagtgtttgtgctggagtgcc |
4504261 |
T |
|
| Q |
101 |
aatgttgtgttggccattctttagtgatcagcca |
134 |
Q |
| |
|
|||||||||||||||||| ||| |||||||||| |
|
|
| T |
4504262 |
aatgttgtgttggccatttttttctgatcagcca |
4504295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 4602156 - 4602011
Alignment:
| Q |
1 |
ggtgtcctcaagagcaagtattaaaccacccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagtatatgtgctggagttcc |
100 |
Q |
| |
|
||||||| |||||| |||| || ||||||||||| || || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |
|
|
| T |
4602156 |
ggtgtccacaagagaaagtgttgaaccacccttcgatcggcggattcttgactcattgtggatggaactcaaccactgaaagcatatgtgctggagtgcc |
4602057 |
T |
|
| Q |
101 |
aatgttgtgttggccattctttagtgatcagccaataaactgtaga |
146 |
Q |
| |
|
|||||||||||||| || ||| |||||||||| |||||||||| |
|
|
| T |
4602056 |
gatgttgtgttggcctttttttgccgatcagccaacaaactgtaga |
4602011 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 24 - 146
Target Start/End: Complemental strand, 4493299 - 4493177
Alignment:
| Q |
24 |
aaccacccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagtatatgtgctggagttccaatgttgtgttggccattcttta |
123 |
Q |
| |
|
||||||| ||| |||||||||||||||||||||||||||||||||||||| || ||| |||||||| ||||| ||||||||||||||||| ||||||| |
|
|
| T |
4493299 |
aaccaccattcgattggtggattcttgactcattgtggatggaactcaactaccaaaaacatatgtgccggagtgccaatgttgtgttggcctttcttta |
4493200 |
T |
|
| Q |
124 |
gtgatcagccaataaactgtaga |
146 |
Q |
| |
|
|||||||||||| |||||||||| |
|
|
| T |
4493199 |
gtgatcagccaacaaactgtaga |
4493177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 4490120 - 4490237
Alignment:
| Q |
1 |
ggtgtcctcaagagcaagtattaaaccacccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagtatatgtgctggagttcc |
100 |
Q |
| |
|
||||||| |||||| | ||||| || |||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||| || |
|
|
| T |
4490120 |
ggtgtccacaagagaaggtattgaatcacccttcaattggtggattcttgactcattgtggatggaactcaatcatggagagtatatgtgctggagtgcc |
4490219 |
T |
|
| Q |
101 |
aatgttgtgttggccatt |
118 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
4490220 |
aatgttgtgttggccatt |
4490237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 4457961 - 4457781
Alignment:
| Q |
1 |
ggtgtcctcaagagcaagtattaaaccacccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagtatatgtgctggagttcc |
100 |
Q |
| |
|
||||||| ||||| |||| || |||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||| || |
|
|
| T |
4457961 |
ggtgtccacaagataaagtgttgaaccacccttcaatcggaggattcttgactcattgtggatgaaactcaaccactgaaagcatatgcgctggagtgcc |
4457862 |
T |
|
| Q |
101 |
aatgttgtgttggccattctttagtgatcagccaataaactgtagacatatttccaatgactgggcgatggggctggaaat |
181 |
Q |
| |
|
|||| || |||||||||||||| ||||| |||||| || |||||| ||||| |||||| || | ||| ||| ||||||| |
|
|
| T |
4457861 |
aatgctgcgttggccattctttggtgataagccaacaagttgtagatttatttgcaatgaatgagagattgggatggaaat |
4457781 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 9 - 151
Target Start/End: Complemental strand, 4571331 - 4571189
Alignment:
| Q |
9 |
caagagcaagtattaaaccacccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagtatatgtgctggagttccaatgttgt |
108 |
Q |
| |
|
|||||| ||||||| ||||| |||||||||||||| ||||||||||| ||||||||||||||||| || ||||| |||| | |||||||||||||||||| |
|
|
| T |
4571331 |
caagagaaagtattgaaccatccttcaattggtggtttcttgactcactgtggatggaactcaacgaccgaaagcatatctactggagttccaatgttgt |
4571232 |
T |
|
| Q |
109 |
gttggccattctttagtgatcagccaataaactgtagacatat |
151 |
Q |
| |
|
||| |||||| ||| |||||||||| |||||||||| |||| |
|
|
| T |
4571231 |
gttagccattttttgctgatcagccagcaaactgtagatatat |
4571189 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 4617389 - 4617272
Alignment:
| Q |
1 |
ggtgtcctcaagagcaagtattaaaccacccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagtatatgtgctggagttcc |
100 |
Q |
| |
|
||||||| ||||| |||| || |||||||||||||| || ||||||||||||||||| |||||||| |||||||||||||||||||| |||||||| || |
|
|
| T |
4617389 |
ggtgtccacaagacaaagtgttgaaccacccttcaatcggaggattcttgactcattgcggatggaattcaaccactgaaagtatatgcgctggagtgcc |
4617290 |
T |
|
| Q |
101 |
aatgttgtgttggccatt |
118 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
4617289 |
aatgttgtgttggccatt |
4617272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 3172108 - 3171991
Alignment:
| Q |
1 |
ggtgtcctcaagagcaagtattaaaccacccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagtatatgtgctggagttcc |
100 |
Q |
| |
|
||||||| |||||| |||| || ||||| ||||||||||| |||||||||||||| || ||||||||||||||||| |||||| ||||||||||| | || |
|
|
| T |
3172108 |
ggtgtccgcaagagaaagtgttgaaccatccttcaattggcggattcttgactcactgcggatggaactcaaccacggaaagtgtatgtgctggaatgcc |
3172009 |
T |
|
| Q |
101 |
aatgttgtgttggccatt |
118 |
Q |
| |
|
|||||||||| ||||||| |
|
|
| T |
3172008 |
aatgttgtgtaggccatt |
3171991 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 4516688 - 4516524
Alignment:
| Q |
1 |
ggtgtcctcaagagcaagtattaaaccacccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagtatatgtgctggagttcc |
100 |
Q |
| |
|
||||||| |||||| |||| || ||||| |||||| |||| ||||||||||||||||||||||||||||| || | ||||| || ||||| ||||| || |
|
|
| T |
4516688 |
ggtgtccgcaagagaaagtgttgaaccatccttcagttggaggattcttgactcattgtggatggaactccacaatggaaagcatctgtgccggagtacc |
4516589 |
T |
|
| Q |
101 |
aatgttgtgttggccattctttagtgatcagccaataaactgtagacatatttccaatgactggg |
165 |
Q |
| |
|
||||||||||||||| || ||| ||| ||||||| ||| || ||| |||||| |||||| |||| |
|
|
| T |
4516588 |
aatgttgtgttggcctttttttgctgagcagccaacaaattgcagatatatttgcaatgaatggg |
4516524 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 4299587 - 4299673
Alignment:
| Q |
2 |
gtgtcctcaagagcaagtattaaaccacccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagtatatg |
88 |
Q |
| |
|
|||||| ||||| |||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||| |
|
|
| T |
4299587 |
gtgtccacaagaacaagtactgaaccacccttcaattggtggattcttgactcactgtggatggaactcaaccattgaaagcatatg |
4299673 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 4391892 - 4391996
Alignment:
| Q |
1 |
ggtgtcctcaagagcaagtattaaaccacccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagtatatgtgctggagttcc |
100 |
Q |
| |
|
||||||| ||||||||||||| |||||||||| |||| |||||||||| || ||||||||||| |||||| ||| |||||| || ||| || ||||||| |
|
|
| T |
4391892 |
ggtgtccgaaagagcaagtattgaaccacccttgaatttgtggattcttaacgcattgtggatgaaactcacccattgaaagcatttgttctagagttcc |
4391991 |
T |
|
| Q |
101 |
aatgt |
105 |
Q |
| |
|
||||| |
|
|
| T |
4391992 |
aatgt |
4391996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 4568423 - 4568271
Alignment:
| Q |
1 |
ggtgtcctcaagagcaagtattaaaccacccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagtatatgtgctggagttcc |
100 |
Q |
| |
|
||||||| ||||||||||| || |||||||||||| |||| |||||||||||||||||||||||||||| || ||||| || ||||| |||| || |
|
|
| T |
4568423 |
ggtgtccgcaagagcaagtgttgaaccacccttcagttggacgattcttgactcattgtggatggaactccacattggaaagcatttgtgccagagtacc |
4568324 |
T |
|
| Q |
101 |
aatgttgtgttggccattctttagtgatcagccaataaactgtagacatattt |
153 |
Q |
| |
|
|||||| |||||||| || ||| ||| ||||||| | |||| ||| |||||| |
|
|
| T |
4568323 |
aatgttatgttggccttttttttctgagcagccaacatactgcagatatattt |
4568271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 102; Significance: 8e-51; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 24103366 - 24103221
Alignment:
| Q |
1 |
ggtgtcctcaagagcaagtattaaaccacccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagtatatgtgctggagttcc |
100 |
Q |
| |
|
||||||| ||||| |||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
|
|
| T |
24103366 |
ggtgtccacaagataaagtgttaaaccacccttcgattggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagtgcc |
24103267 |
T |
|
| Q |
101 |
aatgttgtgttggccattctttagtgatcagccaataaactgtaga |
146 |
Q |
| |
|
|||||||||||||||||||||| ||||||| |||| |||||||||| |
|
|
| T |
24103266 |
aatgttgtgttggccattctttggtgatcaaccaacaaactgtaga |
24103221 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 27999864 - 28000009
Alignment:
| Q |
1 |
ggtgtcctcaagagcaagtattaaaccacccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagtatatgtgctggagttcc |
100 |
Q |
| |
|
||||||| |||||| |||| || |||||||||||||| | || ||||||||||| || ||||||||||||||||| ||||| ||||| |||||||| || |
|
|
| T |
27999864 |
ggtgtccacaagagaaagttttgaaccacccttcaatcagcgggttcttgactcactgcggatggaactcaaccaccgaaagcatatgcgctggagtgcc |
27999963 |
T |
|
| Q |
101 |
aatgttgtgttggccattctttagtgatcagccaataaactgtaga |
146 |
Q |
| |
|
||||||||||||| |||| ||| ||||||||||| |||||||||| |
|
|
| T |
27999964 |
aatgttgtgttggtcattttttgctgatcagccaacaaactgtaga |
28000009 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 73
Target Start/End: Original strand, 20155247 - 20155290
Alignment:
| Q |
30 |
ccttcaattggtggattcttgactcattgtggatggaactcaac |
73 |
Q |
| |
|
||||||||||| ||||||||||| |||||||||||||| ||||| |
|
|
| T |
20155247 |
ccttcaattggaggattcttgacacattgtggatggaattcaac |
20155290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 101; Significance: 3e-50; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 9 - 165
Target Start/End: Original strand, 16686040 - 16686196
Alignment:
| Q |
9 |
caagagcaagtattaaaccacccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagtatatgtgctggagttccaatgttgt |
108 |
Q |
| |
|
|||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
16686040 |
caagagcaagtattaaaccatccttcaatcggtggattcttaactcattgtggatggaactcaaccactgaaagtatatatgctggagttccaatgttgt |
16686139 |
T |
|
| Q |
109 |
gttggccattctttagtgatcagccaataaactgtagacatatttccaatgactggg |
165 |
Q |
| |
|
|||||||||| ||| |||||||||| ||| || ||| |||||| |||||| |||| |
|
|
| T |
16686140 |
gttggccattttttgctgatcagccagcaaaatgcagatatatttgcaatgaatggg |
16686196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 1674593 - 1674448
Alignment:
| Q |
1 |
ggtgtcctcaagagcaagtattaaaccacccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagtatatgtgctggagttcc |
100 |
Q |
| |
|
||||||| |||||| |||| || |||||||||||||| || ||||||||||| || || ||||||||||||||||||||||| ||||| |||||||| || |
|
|
| T |
1674593 |
ggtgtccacaagagaaagtgttgaaccacccttcaatcggcggattcttgacacactgcggatggaactcaaccactgaaagcatatgcgctggagtgcc |
1674494 |
T |
|
| Q |
101 |
aatgttgtgttggccattctttagtgatcagccaataaactgtaga |
146 |
Q |
| |
|
|||||||||||||||||| ||| ||||||||||| |||||||||| |
|
|
| T |
1674493 |
aatgttgtgttggccattttttgctgatcagccaacaaactgtaga |
1674448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 20863608 - 20863749
Alignment:
| Q |
1 |
ggtgtcctcaagagcaagtattaaaccacccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagtatatgtgctggagttcc |
100 |
Q |
| |
|
||||||| |||||| | || || ||||| ||||||||||||||||| | ||||||||||||||||||||||||| ||| || |||||||||||||| || |
|
|
| T |
20863608 |
ggtgtccacaagagaaggtgttgaaccatccttcaattggtggatttctaactcattgtggatggaactcaaccattgagagcatatgtgctggagtgcc |
20863707 |
T |
|
| Q |
101 |
aatgttgtgttggccattctttagtgatcagccaataaactg |
142 |
Q |
| |
|
||||||||| |||||||| ||| ||||||||| | |||||| |
|
|
| T |
20863708 |
aatgttgtgctggccattttttgctgatcagccgacaaactg |
20863749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 74
Target Start/End: Original strand, 1969140 - 1969181
Alignment:
| Q |
33 |
tcaattggtggattcttgactcattgtggatggaactcaacc |
74 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| |||||| |
|
|
| T |
1969140 |
tcaattggtggattcttgactcattgtggctggaattcaacc |
1969181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 3484 - 3629
Alignment:
| Q |
1 |
ggtgtcctcaagagcaagtattaaaccacccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagtatatgtgctggagttcc |
100 |
Q |
| |
|
||||||| |||||||||||| | | |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||| || |
|
|
| T |
3484 |
ggtgtccacaagagcaagtactgatccacccttcaattggtggattcttgactcattgtggatggaattcaaccactgaaagcatatgcgctggagtacc |
3583 |
T |
|
| Q |
101 |
aatgttgtgttggccattctttagtgatcagccaataaactgtaga |
146 |
Q |
| |
|
|||| | ||||||||||||||| |||||||||||| |||||||||| |
|
|
| T |
3584 |
aatgctttgttggccattctttggtgatcagccaacaaactgtaga |
3629 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 1281481 - 1281336
Alignment:
| Q |
1 |
ggtgtcctcaagagcaagtattaaaccacccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagtatatgtgctggagttcc |
100 |
Q |
| |
|
||||||| |||||| |||| || |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |
|
|
| T |
1281481 |
ggtgtccacaagagaaagtgttgaaccacccttcaatcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagtgcc |
1281382 |
T |
|
| Q |
101 |
aatgttgtgttggccattctttagtgatcagccaataaactgtaga |
146 |
Q |
| |
|
|||||||||||||||||| ||| ||||||||||| | |||||||| |
|
|
| T |
1281381 |
aatgttgtgttggccattttttgctgatcagccaacagactgtaga |
1281336 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 83; Significance: 2e-39; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 3086787 - 3086637
Alignment:
| Q |
1 |
ggtgtcctcaagagcaagtattaaaccacccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagtatatgtgctggagttcc |
100 |
Q |
| |
|
||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||| || |
|
|
| T |
3086787 |
ggtgtccgcaagagcaagtattgaatcacccttcaattggtggattcttgactcattgtggatggaactcaacggttgaaagcgtacttgctggagtgcc |
3086688 |
T |
|
| Q |
101 |
aatgttgtgttggccattctttagtgatcagccaataaactgtagacatat |
151 |
Q |
| |
|
|||||||||||||||||| | | | ||||| ||||||||||||||| |||| |
|
|
| T |
3086687 |
aatgttgtgttggccattttatggagatcaaccaataaactgtagatatat |
3086637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 41511442 - 41511484
Alignment:
| Q |
31 |
cttcaattggtggattcttgactcattgtggatggaactcaac |
73 |
Q |
| |
|
|||||||||||||||| |||||||||||||| ||||| ||||| |
|
|
| T |
41511442 |
cttcaattggtggatttttgactcattgtggttggaattcaac |
41511484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 48532780 - 48532826
Alignment:
| Q |
27 |
cacccttcaattggtggattcttgactcattgtggatggaactcaac |
73 |
Q |
| |
|
|||||||||||||| |||||||| || |||||||||||||| ||||| |
|
|
| T |
48532780 |
cacccttcaattggaggattcttaacacattgtggatggaattcaac |
48532826 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0477 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 4451 - 4568
Alignment:
| Q |
1 |
ggtgtcctcaagagcaagtattaaaccacccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagtatatgtgctggagttcc |
100 |
Q |
| |
|
||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||| ||||| || |
|
|
| T |
4451 |
ggtgtccacaagagcaagtactgaaccacccttcaattggtggattcttgactcattgcggatggaactcaaccattgaaagcatatgtgtaggagtgcc |
4550 |
T |
|
| Q |
101 |
aatgttgtgttggccatt |
118 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
4551 |
aatgttgtgttggccatt |
4568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 3450 - 3566
Alignment:
| Q |
1 |
ggtgtcctcaagagcaagtattaaaccacccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagtatatgtgctggagttcc |
100 |
Q |
| |
|
||||||| |||||||||| || |||||||||| | ||||||||||||| ||||||||||||||||||||||||| |||||| || ||| |||||||||| |
|
|
| T |
3450 |
ggtgtccgtaagagcaagtgttgaaccaccctt-agttggtggattcttaactcattgtggatggaactcaaccattgaaagcatttgttctggagttcc |
3548 |
T |
|
| Q |
101 |
aatgttgtgttggccatt |
118 |
Q |
| |
|
|||| || |||||||||| |
|
|
| T |
3549 |
aatgctgcgttggccatt |
3566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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