View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8208A_low_458 (Length: 208)
Name: NF8208A_low_458
Description: NF8208A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8208A_low_458 |
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Alignment Details
Target: chr5 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 12 - 203
Target Start/End: Complemental strand, 11367861 - 11367670
Alignment:
| Q |
12 |
tttttaaactgcaaattttattaaacaacctctagcataagacatgcccaaggtgtaaagaagaacaatattgttacaataccgctattacaaatggata |
111 |
Q |
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| T |
11367861 |
tttttaagctgcaaattttattaaacaacctctagcataagacatgcccaaggtgtaaagaagaacaatattgttacaataccgctattacaaatggata |
11367762 |
T |
|
| Q |
112 |
taacaaaagaaggagacgtataaagactcccaggtgagaaacctaataccaaaccagaggtccaaaacagaccaggtatgccaacaccaaac |
203 |
Q |
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| T |
11367761 |
taacaaaagaaggagacgtataaagactcccaggtgagaaaactaataccaaaccagaggtccaaaacagaccaggtatgccaccaccaaac |
11367670 |
T |
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