View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8208A_low_465 (Length: 206)

Name: NF8208A_low_465
Description: NF8208A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8208A_low_465
NF8208A_low_465
[»] scaffold0031 (1 HSPs)
scaffold0031 (13-206)||(46272-46466)
[»] chr8 (48 HSPs)
chr8 (13-206)||(15961130-15961324)
chr8 (13-206)||(18997698-18997892)
chr8 (13-206)||(30473921-30474115)
chr8 (13-206)||(44832223-44832417)
chr8 (13-206)||(6299057-6299251)
chr8 (13-206)||(10477935-10478129)
chr8 (13-206)||(32110898-32111092)
chr8 (13-206)||(995852-996046)
chr8 (13-206)||(18175379-18175573)
chr8 (13-206)||(39257441-39257635)
chr8 (13-206)||(40026798-40026992)
chr8 (13-206)||(11725188-11725382)
chr8 (13-206)||(28274251-28274445)
chr8 (18-206)||(18210661-18210850)
chr8 (26-206)||(35122359-35122540)
chr8 (19-206)||(28582859-28583047)
chr8 (13-206)||(18841902-18842096)
chr8 (13-194)||(19240661-19240843)
chr8 (13-194)||(19313845-19314027)
chr8 (13-206)||(44836907-44837101)
chr8 (13-204)||(19412829-19413022)
chr8 (13-206)||(18568863-18569057)
chr8 (13-206)||(24408874-24409068)
chr8 (13-206)||(11142459-11142659)
chr8 (13-191)||(24004779-24004958)
chr8 (50-206)||(39997726-39997883)
chr8 (13-132)||(23353688-23353808)
chr8 (13-206)||(25875327-25875530)
chr8 (13-75)||(18481929-18481991)
chr8 (13-61)||(39997660-39997708)
chr8 (18-61)||(6299290-6299333)
chr8 (18-61)||(10477853-10477896)
chr8 (18-61)||(11142381-11142424)
chr8 (18-61)||(11725106-11725149)
chr8 (18-61)||(18175297-18175340)
chr8 (18-61)||(18997616-18997659)
chr8 (18-61)||(19240580-19240623)
chr8 (18-61)||(19313764-19313807)
chr8 (18-61)||(19412752-19412795)
chr8 (18-61)||(23353846-23353889)
chr8 (18-61)||(24408795-24408838)
chr8 (18-61)||(30474153-30474196)
chr8 (18-61)||(32111131-32111174)
chr8 (18-61)||(35122585-35122628)
chr8 (18-61)||(39997580-39997623)
chr8 (18-61)||(44832457-44832500)
chr8 (18-61)||(44836824-44836867)
chr8 (19-61)||(18210893-18210935)
[»] chr7 (35 HSPs)
chr7 (13-206)||(21804609-21804803)
chr7 (13-206)||(38163376-38163570)
chr7 (13-206)||(42242191-42242385)
chr7 (18-206)||(3840678-3840867)
chr7 (13-206)||(27138565-27138759)
chr7 (13-206)||(33916984-33917178)
chr7 (13-206)||(31373454-31373648)
chr7 (13-206)||(17178274-17178469)
chr7 (13-206)||(21341821-21342015)
chr7 (13-206)||(21669979-21670173)
chr7 (13-206)||(24924077-24924271)
chr7 (13-206)||(15109702-15109896)
chr7 (13-206)||(16376582-16376776)
chr7 (13-202)||(21656626-21656816)
chr7 (13-206)||(43933581-43933775)
chr7 (13-206)||(40968889-40969083)
chr7 (13-206)||(13786168-13786362)
chr7 (13-204)||(27903456-27903648)
chr7 (13-206)||(21753529-21753723)
chr7 (50-204)||(39030291-39030446)
chr7 (13-63)||(31096698-31096748)
chr7 (18-61)||(15109930-15109973)
chr7 (18-61)||(3840912-3840955)
chr7 (18-61)||(16376812-16376855)
chr7 (18-61)||(17178508-17178551)
chr7 (18-61)||(21341737-21341780)
chr7 (18-61)||(21656547-21656590)
chr7 (18-61)||(21669895-21669938)
chr7 (18-61)||(21804842-21804885)
chr7 (18-61)||(27138798-27138841)
chr7 (18-61)||(31373370-31373413)
chr7 (18-61)||(33917217-33917260)
chr7 (18-61)||(42242424-42242467)
chr7 (18-59)||(43933815-43933856)
chr7 (21-61)||(24924001-24924041)
[»] chr6 (25 HSPs)
chr6 (13-206)||(12597302-12597496)
chr6 (13-206)||(19997663-19997857)
chr6 (13-206)||(33645940-33646134)
chr6 (13-206)||(28099634-28099828)
chr6 (13-206)||(2266766-2266968)
chr6 (13-206)||(10584765-10584959)
chr6 (13-206)||(17202430-17202624)
chr6 (19-206)||(13533771-13533959)
chr6 (13-206)||(2005426-2005620)
chr6 (18-206)||(15044725-15044914)
chr6 (13-206)||(3592891-3593085)
chr6 (13-139)||(8539598-8539725)
chr6 (13-139)||(25448747-25448874)
chr6 (13-176)||(17594814-17594979)
chr6 (104-206)||(33035523-33035625)
chr6 (118-206)||(1405600-1405688)
chr6 (18-61)||(2266684-2266727)
chr6 (18-61)||(10584996-10585039)
chr6 (18-61)||(12597535-12597578)
chr6 (18-61)||(15044639-15044682)
chr6 (18-61)||(17202348-17202391)
chr6 (18-61)||(17594733-17594776)
chr6 (18-61)||(19997580-19997623)
chr6 (18-61)||(28099868-28099911)
chr6 (18-61)||(33645858-33645901)
[»] chr5 (39 HSPs)
chr5 (13-206)||(10729479-10729673)
chr5 (13-206)||(17373201-17373395)
chr5 (13-206)||(20874686-20874880)
chr5 (13-206)||(34107375-34107569)
chr5 (13-206)||(34110650-34110844)
chr5 (13-206)||(38246902-38247096)
chr5 (13-206)||(16526343-16526537)
chr5 (13-206)||(33570344-33570538)
chr5 (13-206)||(2398979-2399171)
chr5 (13-196)||(14141154-14141338)
chr5 (13-204)||(27647928-27648120)
chr5 (13-206)||(1395987-1396181)
chr5 (13-206)||(5479194-5479388)
chr5 (13-206)||(20655086-20655280)
chr5 (13-206)||(29275622-29275816)
chr5 (13-201)||(6940545-6940734)
chr5 (13-206)||(33375760-33375956)
chr5 (13-206)||(24223201-24223395)
chr5 (13-188)||(1394541-1394717)
chr5 (13-206)||(25099273-25099467)
chr5 (13-206)||(25158363-25158557)
chr5 (18-180)||(17913744-17913907)
chr5 (93-206)||(40177120-40177233)
chr5 (18-61)||(1395907-1395950)
chr5 (18-61)||(2399210-2399253)
chr5 (18-61)||(5479115-5479158)
chr5 (18-61)||(6940768-6940811)
chr5 (18-61)||(10729712-10729755)
chr5 (18-61)||(14141377-14141420)
chr5 (18-61)||(16526577-16526620)
chr5 (18-61)||(17373434-17373477)
chr5 (18-61)||(20874604-20874647)
chr5 (18-61)||(24223434-24223477)
chr5 (18-61)||(27647845-27647888)
chr5 (18-61)||(33570578-33570621)
chr5 (18-61)||(34107608-34107651)
chr5 (18-61)||(34110566-34110609)
chr5 (18-61)||(38247135-38247178)
chr5 (18-61)||(40177033-40177076)
[»] chr4 (39 HSPs)
chr4 (13-206)||(16917925-16918119)
chr4 (13-206)||(52434622-52434816)
chr4 (13-206)||(30824959-30825153)
chr4 (13-206)||(53143299-53143493)
chr4 (13-206)||(12090496-12090691)
chr4 (13-206)||(37651664-37651858)
chr4 (13-206)||(31966006-31966200)
chr4 (19-206)||(16904989-16905177)
chr4 (13-206)||(46256032-46256226)
chr4 (13-206)||(33139508-33139702)
chr4 (13-206)||(44376116-44376310)
chr4 (13-194)||(45782478-45782660)
chr4 (13-206)||(45977027-45977221)
chr4 (19-206)||(35760585-35760773)
chr4 (13-206)||(31628524-31628718)
chr4 (13-206)||(41387124-41387318)
chr4 (13-206)||(37590841-37591035)
chr4 (13-192)||(48118582-48118762)
chr4 (13-202)||(52098231-52098422)
chr4 (13-206)||(39058394-39058588)
chr4 (13-206)||(47142837-47143031)
chr4 (18-181)||(50229768-50229933)
chr4 (13-206)||(54624955-54625142)
chr4 (149-203)||(50229712-50229766)
chr4 (18-61)||(12090730-12090773)
chr4 (18-61)||(16905218-16905261)
chr4 (18-61)||(16918158-16918201)
chr4 (18-61)||(30825192-30825235)
chr4 (18-61)||(31966239-31966282)
chr4 (89-136)||(34684603-34684650)
chr4 (18-61)||(39058622-39058665)
chr4 (18-61)||(45977264-45977307)
chr4 (18-61)||(47143070-47143113)
chr4 (18-61)||(48118802-48118845)
chr4 (18-61)||(52098460-52098503)
chr4 (18-61)||(52434540-52434583)
chr4 (18-61)||(53143534-53143577)
chr4 (18-61)||(54624879-54624922)
chr4 (18-58)||(50229979-50230019)
[»] chr3 (39 HSPs)
chr3 (13-206)||(3898420-3898614)
chr3 (13-206)||(12264198-12264392)
chr3 (13-206)||(38653964-38654158)
chr3 (13-206)||(43363648-43363842)
chr3 (13-206)||(49672560-49672754)
chr3 (13-206)||(54073025-54073219)
chr3 (13-206)||(1941757-1941951)
chr3 (13-206)||(21098302-21098496)
chr3 (13-206)||(34121353-34121547)
chr3 (13-206)||(49506386-49506580)
chr3 (13-206)||(4584471-4584665)
chr3 (13-206)||(20671247-20671441)
chr3 (13-206)||(26948796-26948990)
chr3 (13-206)||(31488409-31488603)
chr3 (13-206)||(36076491-36076685)
chr3 (13-204)||(45557923-45558115)
chr3 (13-206)||(39146438-39146632)
chr3 (13-201)||(24119205-24119394)
chr3 (13-206)||(49478206-49478400)
chr3 (13-206)||(55041620-55041820)
chr3 (60-206)||(40014690-40014837)
chr3 (89-206)||(26051339-26051457)
chr3 (13-86)||(26052236-26052309)
chr3 (141-206)||(6460205-6460269)
chr3 (18-61)||(1941990-1942033)
chr3 (18-61)||(3898338-3898381)
chr3 (18-61)||(12264115-12264158)
chr3 (18-61)||(20671166-20671209)
chr3 (18-61)||(21098219-21098262)
chr3 (18-61)||(26052349-26052392)
chr3 (18-61)||(26948689-26948732)
chr3 (18-61)||(31488329-31488372)
chr3 (18-61)||(34121271-34121314)
chr3 (18-61)||(38654198-38654241)
chr3 (18-61)||(43363881-43363924)
chr3 (18-61)||(49478124-49478167)
chr3 (18-61)||(49672478-49672521)
chr3 (18-61)||(55041858-55041901)
chr3 (18-59)||(36076723-36076764)
[»] chr2 (27 HSPs)
chr2 (13-206)||(41663235-41663429)
chr2 (13-206)||(41664508-41664702)
chr2 (13-206)||(6120550-6120744)
chr2 (13-206)||(18351549-18351743)
chr2 (13-206)||(44902080-44902273)
chr2 (18-206)||(20544828-20545017)
chr2 (13-206)||(19596400-19596594)
chr2 (13-206)||(31424007-31424201)
chr2 (13-206)||(42441958-42442156)
chr2 (13-206)||(8700259-8700453)
chr2 (13-206)||(26231296-26231490)
chr2 (13-206)||(36279491-36279685)
chr2 (18-205)||(34007747-34007935)
chr2 (13-203)||(999271-999462)
chr2 (13-206)||(42055197-42055389)
chr2 (28-202)||(16214837-16215012)
chr2 (83-206)||(27944833-27944956)
chr2 (89-206)||(692239-692356)
chr2 (18-61)||(19596634-19596677)
chr2 (18-61)||(6120467-6120510)
chr2 (18-61)||(16214741-16214784)
chr2 (18-61)||(18351467-18351510)
chr2 (18-61)||(26231527-26231570)
chr2 (18-61)||(31423924-31423967)
chr2 (18-61)||(34007980-34008023)
chr2 (18-61)||(41663152-41663195)
chr2 (18-61)||(42441876-42441919)
[»] chr1 (35 HSPs)
chr1 (13-206)||(4266379-4266573)
chr1 (13-206)||(34888723-34888917)
chr1 (13-206)||(38913784-38913978)
chr1 (13-206)||(50151058-50151252)
chr1 (13-206)||(2951403-2951597)
chr1 (32-206)||(1231813-1231988)
chr1 (13-201)||(7333942-7334131)
chr1 (13-203)||(39727978-39728169)
chr1 (13-206)||(9216029-9216223)
chr1 (13-206)||(23482744-23482938)
chr1 (13-206)||(35614065-35614259)
chr1 (13-206)||(18706546-18706739)
chr1 (26-204)||(35614827-35615005)
chr1 (13-206)||(38444629-38444823)
chr1 (18-206)||(52687151-52687339)
chr1 (83-206)||(50326070-50326193)
chr1 (13-206)||(18855270-18855463)
chr1 (26-200)||(19764593-19764768)
chr1 (88-206)||(31018237-31018355)
chr1 (13-152)||(19768462-19768602)
chr1 (13-148)||(2590333-2590468)
chr1 (126-206)||(5061335-5061415)
chr1 (149-206)||(29942153-29942210)
chr1 (18-61)||(1231725-1231768)
chr1 (18-61)||(2951636-2951679)
chr1 (18-61)||(4266297-4266340)
chr1 (18-61)||(18706773-18706816)
chr1 (18-61)||(19764814-19764857)
chr1 (18-61)||(19768382-19768425)
chr1 (18-61)||(23482972-23483015)
chr1 (18-61)||(35613984-35614027)
chr1 (18-61)||(35614734-35614777)
chr1 (18-61)||(38914017-38914060)
chr1 (18-61)||(52036310-52036353)
chr1 (18-58)||(7333863-7333903)
[»] scaffold0022 (2 HSPs)
scaffold0022 (13-204)||(149089-149281)
scaffold0022 (18-61)||(149318-149361)
[»] scaffold0173 (1 HSPs)
scaffold0173 (13-206)||(19345-19539)
[»] scaffold0836 (1 HSPs)
scaffold0836 (91-206)||(5315-5430)
[»] scaffold0515 (1 HSPs)
scaffold0515 (91-206)||(6098-6213)
[»] scaffold0306 (1 HSPs)
scaffold0306 (91-206)||(6108-6223)


Alignment Details
Target: scaffold0031 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 46272 - 46466
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  46272 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 46371  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46372 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 46466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 167; Significance: 1e-89; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 15961130 - 15961324
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  15961130 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 15961229  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15961230 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 15961324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 18997698 - 18997892
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  18997698 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 18997797  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18997798 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 18997892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 30474115 - 30473921
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  30474115 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 30474016  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30474015 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 30473921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 44832417 - 44832223
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  44832417 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 44832318  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44832317 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 44832223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 6299251 - 6299057
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  6299251 ccaataatataatattgacatataattttaacaaaggaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 6299152  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6299151 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 6299057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 10477935 - 10478129
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  10477935 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 10478034  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| |||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10478035 gttcgaattccaacatctgcatatatttgtgaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 10478129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 32111092 - 32110898
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  32111092 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 32110993  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32110992 gttcgaattccaacatctgcatatatttggaaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 32110898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 159; E-Value: 7e-85
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 996046 - 995852
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||    
T  996046 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaagttaatatttttttggtgaataagcgtggtgtctgag 995947  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  995946 gttcgaattccaacatatgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 995852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 18175379 - 18175573
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgag 111  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||| |||||||||||| ||||||||||||    
T  18175379 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgtttgataataattaatatttttttggtgaataagtgtggtgtctgag 18175478  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18175479 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 18175573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 39257441 - 39257635
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  39257441 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 39257540  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  39257541 gttcaaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgt 39257635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 40026798 - 40026992
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  40026798 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 40026897  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||    
T  40026898 gttcaaattccaacatctgcatatatttgggaccacatatttcattatctttgatatgcattgagatttgtttttgtctactacatctacaatgt 40026992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 11725188 - 11725382
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  11725188 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 11725287  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| |||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  11725288 gttcgaattccaacatctgcatatatttgagaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgt 11725382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 28274445 - 28274251
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||| ||||    
T  28274445 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtatgag 28274346  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  28274345 gttcgaattccaacatctgcgtatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctgctacatctacaatgt 28274251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 18 - 206
Target Start/End: Complemental strand, 18210850 - 18210661
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| |||||||||||| ||||||||||||| ||| |||||||||||||||||||| ||||||||||  |||||||||| |||||||||||||||||    
T  18210850 aatataacattgacatataactttaacaaaagaaggaaataacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttca 18210751  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18210750 aattccaacatctgcatatatttgagaccacatatttcattctctttgatatgcattgagatttatttttgtctactatatctacaatgt 18210661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 26 - 206
Target Start/End: Complemental strand, 35122540 - 35122359
Alignment:
Q  26 attgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttcaaattccaa 124  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||  |||||||||| |||||||||||| ||| ||||||||    
T  35122540 attgacatataattttaataaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgagattcgaattccaa 35122441  T
Q  125 catctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  35122440 catctgcatatattttggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgt 35122359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 19 - 206
Target Start/End: Original strand, 28582859 - 28583047
Alignment:
Q  19 atataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttcaa 117  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| |||||||||||||||| |    
T  28582859 atataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcga 28582958  T
Q  118 attccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    ||||||||||||||||||||||  ||||||||||||| ||||||||||||| ||||||||||||||||| ||||||| |||||||||||    
T  28582959 attccaacatctgcatatatttgagaccacatatttcattctctttgatatacattgagatttgtttttatctactacatctacaatgt 28583047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 18841902 - 18842096
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  18841902 ccaataatataacattgacatataattttaacaaaagaatgaagtaacatacaattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 18842001  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
     ||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  18842002 attcgaattccaacatctgcatatattttggaccacatatttcattctctttgatatgcattgagatttatttttgtctactacatctacaatgt 18842096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 13 - 194
Target Start/End: Original strand, 19240661 - 19240843
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatattttttg-gtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||   ||||||||| ||||||||||||    
T  19240661 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacaccattgataaaaattaatatttttaacgtgaataagtgtggtgtctgag 19240760  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctacta 194  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  19240761 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctacta 19240843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 13 - 194
Target Start/End: Original strand, 19313845 - 19314027
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatattttttg-gtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||   ||||||||| ||||||||||||    
T  19313845 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacaccattgataaaaattaatatttttaacgtgaataagtgtggtgtctgag 19313944  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctacta 194  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  19313945 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctacta 19314027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 44836907 - 44837101
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||| ||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||  |||||||||||||||||||||||    
T  44836907 ccaataatttaacattgagatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatttttaaggtgaataagcgtggtgtctgag 44837006  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| |||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||| ||||||||||||| |||||||||||    
T  44837007 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgtattgagatttatttttgtctactacatctacaatgt 44837101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 13 - 204
Target Start/End: Original strand, 19412829 - 19413022
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaa-gaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctga 110  Q
    |||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||  |||||||||  |||||||||||    
T  19412829 ccaataatataacattgacatataattttaacaaaaagaatgaagtaacacacgatggataaaaattaatatttttaaggtgaataactgtggtgtctga 19412928  T
Q  111 ggttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaat 204  Q
    ||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  19412929 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaat 19413022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 18568863 - 18569057
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatattttttgg-tgaataagcgtggtgtctgag 111  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  | |||||||| ||||||| ||||    
T  18568863 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaagatgaataagtgtggtgtttgag 18568962  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||| ||||||||||||| | |||||||||||    
T  18568963 gttcgaattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatatgtttttgtctacaacatctacaatgt 18569057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 24408874 - 24409068
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||| |||     
T  24408874 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtatgat 24408973  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| || ||||||||||||||| |||||||||||| ||||||| |||||||||||    
T  24408974 gttcgaattccaacatctgcatatatttgggaccacatatttcattatctttgatatgcattaagatttgtttttatctactacatctacaatgt 24409068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 11142459 - 11142659
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaa------taatatttttt-ggtgaataagcgtggtg 105  Q
    |||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||  |||||||||| ||||||    
T  11142459 ccaataatataacactgacatataattttaacaaaagaatgaagtaacacacgattgataaaaataaaaattaatatttttaaggtgaataagtgtggtg 11142558  T
Q  106 tctgaggttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatg 205  Q
    |||||||||| ||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  11142559 tctgaggttcgaattccaacatctgcatatatttgggagcacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatg 11142658  T
Q  206 t 206  Q
    |    
T  11142659 t 11142659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 13 - 191
Target Start/End: Complemental strand, 24004958 - 24004779
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  24004958 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacatgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 24004859  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtcta 191  Q
    |||| |||| |||||||||||||||||| ||||||||| |||  |||||||||||||||||||||||||| |||||||||    
T  24004858 gttcgaatttcaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgattttgtcta 24004779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 50 - 206
Target Start/End: Original strand, 39997726 - 39997883
Alignment:
Q  50 aatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttcaaattccaacatctgcatatatttaggaccaca 148  Q
    ||||||||||||||||||||||||||| |||||||||   |||||||||| |||||||||||||||| ||||||||||||||||||||||| | ||||||    
T  39997726 aatgaagtaacacacgattgataaaaattaatattttaaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttggaaccaca 39997825  T
Q  149 tatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  39997826 tatttcattctctttgatatacattgagatttgtttttgtctactacatctacaatgt 39997883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 23353808 - 23353688
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatattttt-tggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||  |||||||||| | ||||||||||    
T  23353808 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacaccattgataaaaattaatatttttaaggtgaataagtggggtgtctgag 23353709  T
Q  112 gttcaaattccaacatctgca 132  Q
    |||| ||||||||||||||||    
T  23353708 gttcgaattccaacatctgca 23353688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 25875530 - 25875327
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatattttt-tggtgaataagcgt---------- 101  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||| ||              
T  25875530 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgttttattctct 25875431  T
Q  102 ----ggtgtctgaggttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatat 197  Q
          |||||||||||| ||||||| ||||||||||      ||| ||||| |||  |||||||| |||||||||||||||||||||||||||||||||    
T  25875430 ttaatatgtctgaggttcgaattccagcatctgcata-----gggagcacatgttttattctctttaatatgcattgagatttgtttttgtctactatat 25875336  T
Q  198 ctacaatgt 206  Q
    |||| ||||    
T  25875335 ctacgatgt 25875327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 75
Target Start/End: Complemental strand, 18481991 - 18481929
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaa 75  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18481991 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaa 18481929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 39997660 - 39997708
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    |||| ||||||| |||||||||||||||| |||||||||||||||||||    
T  39997660 ccaataatataacattgacatataatttttacaaaagaatgaagtaaca 39997708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 6299333 - 6299290
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  6299333 aatataacattaacatataatttttacaaaagaatgaagtaaca 6299290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 10477853 - 10477896
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  10477853 aatataacattaacatataatttttacaaaagaatgaagtaaca 10477896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 11142381 - 11142424
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  11142381 aatataacattaacatataatttttacaaaagaatgaagtaaca 11142424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 11725106 - 11725149
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  11725106 aatataacattaacatataatttttacaaaagaatgaagtaaca 11725149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 18175297 - 18175340
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  18175297 aatataacattaacatataatttttacaaaagaatgaagtaaca 18175340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 18997616 - 18997659
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  18997616 aatataacattaacatataatttttacaaaagaatgaagtaaca 18997659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 19240580 - 19240623
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  19240580 aatataacattaacatataatttttacaaaagaatgaagtaaca 19240623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 19313764 - 19313807
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  19313764 aatataacattaacatataatttttacaaaagaatgaagtaaca 19313807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 19412752 - 19412795
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  19412752 aatataacattaacatataatttttacaaaagaatgaagtaaca 19412795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 23353889 - 23353846
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  23353889 aatataacattaacatataatttttacaaaagaatgaagtaaca 23353846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 24408795 - 24408838
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  24408795 aatataacattaacatataatttttacaaaagaatgaagtaaca 24408838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 30474196 - 30474153
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  30474196 aatataacattaacatataatttttacaaaagaatgaagtaaca 30474153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 32111174 - 32111131
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  32111174 aatataacattaacatataatttttacaaaagaatgaagtaaca 32111131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 35122628 - 35122585
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  35122628 aatataacattaacatataatttttacaaaagaatgaagtaaca 35122585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 39997580 - 39997623
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  39997580 aatataacattaacatataatttttacaaaagaatgaagtaaca 39997623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 44832500 - 44832457
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  44832500 aatataacattaacatataatttttacaaaagaatgaagtaaca 44832457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 44836824 - 44836867
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  44836824 aatataacattaacatataatttttacaaaagaatgaagtaaca 44836867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 18210935 - 18210893
Alignment:
Q  19 atataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    |||||| ||| |||||||||||| |||||||||||||||||||    
T  18210935 atataacattaacatataatttttacaaaagaatgaagtaaca 18210893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 167; Significance: 1e-89; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 21804803 - 21804609
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  21804803 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 21804704  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21804703 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 21804609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 38163570 - 38163376
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  38163570 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 38163471  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38163470 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 38163376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 42242385 - 42242191
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  42242385 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 42242286  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42242285 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 42242191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 18 - 206
Target Start/End: Complemental strand, 3840867 - 3840678
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||     
T  3840867 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 3840768  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3840767 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 3840678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 27138759 - 27138565
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  27138759 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 27138660  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  27138659 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctagaatgt 27138565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 33917178 - 33916984
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  33917178 ccaataatataatattgacatataattttaacaaaagaatgaaataacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 33917079  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33917078 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 33916984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 31373454 - 31373648
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgag 111  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  31373454 ccaataatataatattgacatataattttaacaaaagaatgaagtaatacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 31373553  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| |||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  31373554 gttcgaatttcaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgt 31373648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 17178469 - 17178274
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt--ggtgaataagcgtggtgtctga 110  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||  |||||||||| |||||||||||    
T  17178469 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacccgattgataaaaattaatattttttttggtgaataagtgtggtgtctga 17178370  T
Q  111 ggttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    ||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  17178369 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgaattgagatttgtttttgtctactatatctacaatgt 17178274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 21341821 - 21342015
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  21341821 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 21341920  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| |||||||||||||||||||||||  ||| ||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  21341921 gttcgaattccaacatctgcatatatttgagactacatatttcattctctttgatatgcattgagatttatttttgtctattatatctacaatgt 21342015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 21669979 - 21670173
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  21669979 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 21670078  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  21670079 gttcgaattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgt 21670173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 24924077 - 24924271
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||  |||||||||| ||||||||||||    
T  24924077 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaatttaatatttttaaggtgaataagtgtggtgtctgag 24924176  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  24924177 gttcaaattccaacatctacatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgt 24924271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 15109896 - 15109702
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatattttttgg-tgaataagcgtggtgtctgag 111  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||  | |||||||| ||||||||||||    
T  15109896 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatacttttaagatgaataagtgtggtgtctgag 15109797  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  15109796 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgt 15109702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 16376776 - 16376582
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  16376776 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 16376677  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| ||||||||| |||  ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16376676 gttcgaattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgt 16376582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 13 - 202
Target Start/End: Original strand, 21656626 - 21656816
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  21656626 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 21656725  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctaca 202  Q
    |||| ||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||  |||||||    
T  21656726 gttcgaattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatttgtttttgtctacttcatctaca 21656816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 43933775 - 43933581
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  43933775 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 43933676  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||  |||||||| |||||||||||||||| ||||||||||||| |||||||||||    
T  43933675 gttcgaattccaacatctgcatatatttgggaccacatattttattctcttttatatgcattgagatttttttttgtctactacatctacaatgt 43933581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 40968889 - 40969083
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  40968889 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 40968988  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| ||||||||| |||  ||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  40968989 gttcgaattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttgtgtctactacatctacaatgt 40969083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 13786168 - 13786362
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| ||||||||||||||||||||||| |||||||||| || ||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  13786168 ccaataatataacattgacatataattttaacaaaaaaatgaagtaagacgcgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 13786267  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| ||||||||| |||  ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  13786268 gttcgaattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgt 13786362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 13 - 204
Target Start/End: Complemental strand, 27903648 - 27903456
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| ||||||||| |||||||||||||||||||||||| ||||||||| |||||| ||||||||||  |||||||||| ||||||| ||||    
T  27903648 ccaataatataacattgacatagaattttaacaaaagaatgaagtaagacacgattggtaaaaattaatatttttaaggtgaataagtgtggtgtatgag 27903549  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaat 204  Q
    |||| ||||||||||||||||||||||| ||||||||| |||  ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  27903548 gttcgaattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaat 27903456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 21753723 - 21753529
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||| ||||||||| ||    
T  21753723 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctaag 21753624  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||  |||||||||||||||||  |||||||| |||  ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  21753623 gttcgaattttaacatctgcatatatttgagaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgt 21753529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 50 - 204
Target Start/End: Complemental strand, 39030446 - 39030291
Alignment:
Q  50 aatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttcaaattccaacatctgcatatatttaggaccaca 148  Q
    |||||||||| |||||||||||||||| ||||||||||  |||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  39030446 aatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccaca 39030347  T
Q  149 tatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaat 204  Q
    | |||  |||||||||||||||||||| |||||||||||||||||| |||||||||    
T  39030346 tgttttattctctttgatatgcattgaaatttgtttttgtctactacatctacaat 39030291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 31096698 - 31096748
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacaca 63  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  31096698 ccaataatataatattgacatataattttaacaaaagaatgaagtaacaca 31096748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 15109973 - 15109930
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  15109973 aatataatattaacatataatttttacaaaagaatgaagtaaca 15109930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 3840955 - 3840912
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  3840955 aatataacattaacatataatttttacaaaagaatgaagtaaca 3840912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 16376855 - 16376812
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| |||||||||||||||| |||||| ||||||||||||    
T  16376855 aatataacattgacatataatttttacaaaataatgaagtaaca 16376812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 17178551 - 17178508
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  17178551 aatataacattaacatataatttttacaaaagaatgaagtaaca 17178508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 21341737 - 21341780
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  21341737 aatataacattaacatataatttttacaaaagaatgaagtaaca 21341780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 21656547 - 21656590
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  21656547 aatataacattaacatataatttttacaaaagaatgaagtaaca 21656590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 21669895 - 21669938
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  21669895 aatataacattaacatataatttttacaaaagaatgaagtaaca 21669938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 21804885 - 21804842
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  21804885 aatataacattaacatataatttttacaaaagaatgaagtaaca 21804842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 27138841 - 27138798
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  27138841 aatataacattaacatataatttttacaaaagaatgaagtaaca 27138798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 31373370 - 31373413
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  31373370 aatataacattaacatataatttttacaaaagaatgaagtaaca 31373413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 33917260 - 33917217
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  33917260 aatataacattaacatataatttttacaaaagaatgaagtaaca 33917217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 42242467 - 42242424
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  42242467 aatataacattaacatataatttttacaaaagaatgaagtaaca 42242424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 43933856 - 43933815
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaa 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||    
T  43933856 aatataacattaacatataatttttacaaaagaatgaagtaa 43933815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 24924001 - 24924041
Alignment:
Q  21 ataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    |||| ||| |||||||||||| |||||||||||||||||||    
T  24924001 ataacattaacatataatttttacaaaagaatgaagtaaca 24924041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 167; Significance: 1e-89; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 12597496 - 12597302
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  12597496 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 12597397  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12597396 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 12597302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 19997663 - 19997857
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  19997663 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 19997762  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19997763 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 19997857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 33645940 - 33646134
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  33645940 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 33646039  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33646040 gttcgaattccaacatctgcatatatttggaaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 33646134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 159; E-Value: 7e-85
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 28099828 - 28099634
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  28099828 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 28099729  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| |||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  28099728 gttcgaattccaacatcagcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgt 28099634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 2266766 - 2266968
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtg--------g 103  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||        |    
T  2266766 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtcgtgg 2266865  T
Q  104 tgtctgaggttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaa 203  Q
    |||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2266866 tgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 2266965  T
Q  204 tgt 206  Q
    |||    
T  2266966 tgt 2266968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 10584959 - 10584765
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| || |||||||||    
T  10584959 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtagtgtctgag 10584860  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  10584859 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattaagatttgtttttgtctactacatctacaatgt 10584765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 17202430 - 17202624
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  17202430 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 17202529  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||| ||||||||||| |||||||||||    
T  17202530 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgtgatttgtatttgtctactacatctacaatgt 17202624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 19 - 206
Target Start/End: Original strand, 13533771 - 13533959
Alignment:
Q  19 atataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttcaa 117  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| |||||||||||||||| |    
T  13533771 atataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcga 13533870  T
Q  118 attccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||| ||||||| |||||||||||    
T  13533871 attccaacatctgcatatatttgggaccacatatttcattctctttgatatacattgagatttgtttttatctactacatctacaatgt 13533959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 2005426 - 2005620
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  2005426 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 2005525  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| |||||||||||||||||||||||| |||||||| |||  ||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  2005526 gttcgaattccaacatctgcatatatttaagaccacatgttttattctctttgatatgcattgagatttgtttttgtctactgcatctacaatgt 2005620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 18 - 206
Target Start/End: Original strand, 15044725 - 15044914
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||| ||||||||||||||||     
T  15044725 aatataacattgacatataattttaacaaaagaatgaagtaaaacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 15044824  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    ||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||| |||| ||||||||||||| |||||||||||    
T  15044825 aattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgaaatttatttttgtctactacatctacaatgt 15044914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 3592891 - 3593085
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||  |||||||||| ||||||||||||    
T  3592891 ccaataatataacattgagatataattttaacaaaagaatgaagtaacacacgattcataaaaattaatatttttaaggtgaataagtgtggtgtctgag 3592990  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| |||||||||||||| |||||||| ||| |||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  3592991 gttcgaattccaacatctgaatatatttgggatcacatatttcattctcttggatatgcattgagatttgtttttgtctactacatctacaatgt 3593085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 13 - 139
Target Start/End: Original strand, 8539598 - 8539725
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatattttt-tggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  8539598 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 8539697  T
Q  112 gttcaaattccaacatctgcatatattt 139  Q
    |||| |||||||||||||||||||||||    
T  8539698 gttcgaattccaacatctgcatatattt 8539725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 13 - 139
Target Start/End: Original strand, 25448747 - 25448874
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatat-tttttggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  25448747 ccaataatataatattgacatataattttaacaaaaaaatgaagtaacacacgattgataaaaattaatatatttttggtgaataagcgtggtgtctgag 25448846  T
Q  112 gttcaaattccaacatctgcatatattt 139  Q
     ||| ||||||||||||| |||||||||    
T  25448847 tttcgaattccaacatctacatatattt 25448874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 13 - 176
Target Start/End: Original strand, 17594814 - 17594979
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaa-ataatattttt-tggtgaataagcgtggtgtctga 110  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||  |||||||||| |||||||||||    
T  17594814 ccaataatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaatttaatatttttaaggtgaataagtgtggtgtctga 17594913  T
Q  111 ggttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgag 176  Q
     |||  |||| |||||||| ||||||||| |||||||||||||| || ||||||||||||||||||    
T  17594914 agtttgaatttcaacatctccatatatttgggaccacatatttcattttctttgatatgcattgag 17594979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 104 - 206
Target Start/End: Original strand, 33035523 - 33035625
Alignment:
Q  104 tgtctgaggttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaa 203  Q
    |||||||| ||| ||||||| |||||||||||||||  |||||||| |||  |||||||||| |||||||||||||||||||||||||||| ||||||||    
T  33035523 tgtctgagattcgaattccagcatctgcatatatttgagaccacatgttttattctctttgacatgcattgagatttgtttttgtctactacatctacaa 33035622  T
Q  204 tgt 206  Q
    |||    
T  33035623 tgt 33035625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 1405688 - 1405600
Alignment:
Q  118 attccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||||||||||||||||||||| ||| |||||||||| |||||||| |||| ||||||||||||||||| ||||||| |||||||||||    
T  1405688 attccaacatctgcatatatttgggatcacatatttcattctctttaatatacattgagatttgtttttatctactacatctacaatgt 1405600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 2266684 - 2266727
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  2266684 aatataacattaacatataatttttacaaaagaatgaagtaaca 2266727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 10585039 - 10584996
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  10585039 aatataacattaacatataatttttacaaaagaatgaagtaaca 10584996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 12597578 - 12597535
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  12597578 aatataacattaacatataatttttacaaaagaatgaagtaaca 12597535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 15044639 - 15044682
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  15044639 aatataacattaacatataatttttacaaaagaatgaagtaaca 15044682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 17202348 - 17202391
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  17202348 aatataacattaacatataatttttacaaaagaatgaagtaaca 17202391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 17594733 - 17594776
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  17594733 aatataacattaacatataatttttacaaaagaatgaagtaaca 17594776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 19997580 - 19997623
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  19997580 aatataacattaacatataatttttacaaaagaatgaagtaaca 19997623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 28099911 - 28099868
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  28099911 aatataacattaacatataatttttacaaaagaatgaagtaaca 28099868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 33645858 - 33645901
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  33645858 aatataacattaacatataatttttacaaaagaatgaagtaaca 33645901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 167; Significance: 1e-89; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 10729673 - 10729479
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  10729673 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttttggtgaataagcgtggtgtctgag 10729574  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  10729573 gttcgaattccaacatctgcatatatttgggaccacatatttcattctcttggatatgcattgagatttgtttttgtctactatatctacaatgt 10729479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 17373395 - 17373201
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  17373395 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 17373296  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17373295 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 17373201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 20874686 - 20874880
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  20874686 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 20874785  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20874786 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 20874880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 34107569 - 34107375
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  34107569 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 34107470  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34107469 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 34107375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 34110650 - 34110844
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  34110650 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 34110749  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34110750 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 34110844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 38247096 - 38246902
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  38247096 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 38246997  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38246996 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 38246902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 16526537 - 16526343
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  16526537 ccaataatataatattgacatataattttaacaaaagaacgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 16526438  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16526437 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 16526343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 33570538 - 33570344
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  33570538 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 33570439  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  33570438 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttggtatgcattgagatttgtttttgtctactatatctacaatgt 33570344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 156; E-Value: 4e-83
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 2399171 - 2398979
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||| |||||||||||||||||||||||    
T  2399171 ccaataatataatattgacatataattttaacaaaagaatgaagtaacac--gattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 2399074  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2399073 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 2398979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 13 - 196
Target Start/End: Complemental strand, 14141338 - 14141154
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  14141338 ccaataatataatattggcatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 14141239  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactata 196  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  14141238 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactata 14141154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 13 - 204
Target Start/End: Original strand, 27647928 - 27648120
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  27647928 ccaacaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 27648027  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaat 204  Q
    |||| |||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  27648028 gttcgaattccaacatctgtatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaat 27648120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 1395987 - 1396181
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||  |||||||||| ||||||||||||    
T  1395987 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgactgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 1396086  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| |||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||| ||||||    
T  1396087 gttcgaattccaacatctgcagatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctgctacatctgcaatgt 1396181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 5479194 - 5479388
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| || |||||||||    
T  5479194 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtagtgtctgag 5479293  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||| ||||||||| ||| |||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  5479294 gttcgaattccaacatctacatatatttgggatcacatatttcattctctttgatatgcattgagatttatttttgtctactacatctacaatgt 5479388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 20655280 - 20655086
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  20655280 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacaattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 20655181  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| ||||||||| |||  ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  20655180 gttcgaattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgt 20655086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 29275622 - 29275816
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||  |||||||||| ||||||||||||    
T  29275622 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaagttaatatttttaaggtgaataagtgtggtgtctgag 29275721  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||| ||||||||||||||| || |||||||||||    
T  29275722 gttcgaattccaacatctgcatatatttgggaccacatgtttcattctctttgatatgcattgaaatttgtttttgtctattacatctacaatgt 29275816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 13 - 201
Target Start/End: Complemental strand, 6940734 - 6940545
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| |||||||  ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  |||||||||| ||||||| ||||    
T  6940734 ccaataatataacgttgacatataattttaacaaaagaatgaagtaacatacgattgataaaaattaatatttttcaggtgaataagtgtggtgtatgag 6940635  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctac 201  Q
    |||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  6940634 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctac 6940545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 33375760 - 33375956
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatattttt-tggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  33375760 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 33375859  T
Q  112 gttcaaattccaacatctgcatatatttagg--accacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| ||  ||||||| |||  ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  33375860 gttcgaattccaacatctgcatatatttgggacaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgt 33375956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 24223395 - 24223201
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||| | ||||||||||| |||||||||||||||||||||||||||||||| |||| | ||||||||||  |||||||||| ||||||||||||    
T  24223395 ccaataatatcacattgacatatacttttaacaaaagaatgaagtaacacacgattggtaaagagtaatatttttaaggtgaataagtgtggtgtctgag 24223296  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||| ||||    
T  24223295 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttcatatgcattgagatttgtttttgtctactacatctacgatgt 24223201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 13 - 188
Target Start/End: Complemental strand, 1394717 - 1394541
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||  |||||| ||| ||||||| ||||    
T  1394717 ccaataatataacattgacatataaatttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaacaagtgtggtgtttgag 1394618  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgt 188  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  1394617 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt 1394541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 25099467 - 25099273
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  || ||||||| |||||| |||||    
T  25099467 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggcgaataagtgtggtgcctgag 25099368  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| |||||||||||||||||||||||  |||||||| |||  |||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  25099367 gttcgaattccaacatctgcatatatttgtgaccacatgttttattctctttgatatgcattcagatttgtttttgtctactacatctacaatgt 25099273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 25158557 - 25158363
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  || ||||||| |||||| |||||    
T  25158557 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggcgaataagtgtggtgcctgag 25158458  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| |||||||||||||||||||||||  |||||||| |||  |||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  25158457 gttcgaattccaacatctgcatatatttgtgaccacatgttttattctctttgatatgcattcagatttgtttttgtctactacatctacaatgt 25158363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 18 - 180
Target Start/End: Original strand, 17913744 - 17913907
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||  |||||||||| ||||| | ||||||||     
T  17913744 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaagattaatatttttaaggtgaataagtgtggtatttgaggttcg 17913843  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagattt 180  Q
    ||||||||||||| ||||||||| ||||||||| |||  |||||||||||||||||||||||||    
T  17913844 aattccaacatctacatatatttgggaccacatgttttattctctttgatatgcattgagattt 17913907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 93 - 206
Target Start/End: Original strand, 40177120 - 40177233
Alignment:
Q  93 aataagcgtggtgtctgaggttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctac 192  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  40177120 aataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctcttttatatgcattgagatttgtttttgtctac 40177219  T
Q  193 tatatctacaatgt 206  Q
    ||||||||||||||    
T  40177220 tatatctacaatgt 40177233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 1395907 - 1395950
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  1395907 aatataacattaacatataatttttacaaaagaatgaagtaaca 1395950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 2399253 - 2399210
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  2399253 aatataacattaacatataatttttacaaaagaatgaagtaaca 2399210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 5479115 - 5479158
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  5479115 aatataacattaacatataatttttacaaaagaatgaagtaaca 5479158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 6940811 - 6940768
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  6940811 aatataacattaacatataatttttacaaaagaatgaagtaaca 6940768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 10729755 - 10729712
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  10729755 aatataacattaacatataatttttacaaaagaatgaagtaaca 10729712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 14141420 - 14141377
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  14141420 aatataacattaacatataatttttacaaaagaatgaagtaaca 14141377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 16526620 - 16526577
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  16526620 aatataacattaacatataatttttacaaaagaatgaagtaaca 16526577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 17373477 - 17373434
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  17373477 aatataacattaacatataatttttacaaaagaatgaagtaaca 17373434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 20874604 - 20874647
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  20874604 aatataacattaacatataatttttacaaaagaatgaagtaaca 20874647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 24223477 - 24223434
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  24223477 aatataacattaacatataatttttacaaaagaatgaagtaaca 24223434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 27647845 - 27647888
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  27647845 aatataacattaacatataatttttacaaaagaatgaagtaaca 27647888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 33570621 - 33570578
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  33570621 aatataacattaacatataatttttacaaaagaatgaagtaaca 33570578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 34107651 - 34107608
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  34107651 aatataacattaacatataatttttacaaaagaatgaagtaaca 34107608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 34110566 - 34110609
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  34110566 aatataacattaacatataatttttacaaaagaatgaagtaaca 34110609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 38247178 - 38247135
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  38247178 aatataacattaacatataatttttacaaaagaatgaagtaaca 38247135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 40177033 - 40177076
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  40177033 aatataacattaacatataatttttacaaaagaatgaagtaaca 40177076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 167; Significance: 1e-89; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 16918119 - 16917925
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  16918119 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 16918020  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16918019 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 16917925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 52434622 - 52434816
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  52434622 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 52434721  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52434722 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 52434816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 30825153 - 30824959
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  30825153 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 30825054  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30825053 gttcgaattccaacatctgcatatatttggaaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 30824959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 53143493 - 53143299
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  53143493 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 53143394  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  53143393 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgt 53143299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 156; E-Value: 4e-83
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 12090691 - 12090496
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaaataatattttttggt-gaataagcgtggtgtctga 110  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  12090691 ccaataatataatattgacatataattttaacaaaagaaatgaagtaacacacgattgataaaaattaatattttttggttgaataagcgtggtgtctga 12090592  T
Q  111 ggttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    ||||| ||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12090591 ggttcgaattccaacatctacatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 12090496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 37651664 - 37651858
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||    
T  37651664 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtttgag 37651763  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| |||||||||||||||||||||||  ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  37651764 gttcgaattccaacatctgcatatatttgagaccacatatttcattctctttcatatgcattgagatttgtttttgtctactatatctacaatgt 37651858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 31966200 - 31966006
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  31966200 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 31966101  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||| ||| || || |||||||||||    
T  31966100 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttatttatgtataataaatctacaatgt 31966006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 19 - 206
Target Start/End: Complemental strand, 16905177 - 16904989
Alignment:
Q  19 atataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttcaa 117  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||  |||||||||| |||||||||||||||| |    
T  16905177 atataacattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcga 16905078  T
Q  118 attccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16905077 attccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgt 16904989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 46256032 - 46256226
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  46256032 ccaataatataacattgacatataattttaacaaaagaatgaagtaagatacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 46256131  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  46256132 gttccaattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgt 46256226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 33139702 - 33139508
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||  ||||||||||||    
T  33139702 ccaataatataacattgacatataattttaacaaaagaatgaagtaatacacgattgataaaaattaatatttttaaggtgaataaatgtggtgtctgag 33139603  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||| ||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  33139602 gttcgaattccaacatctgcatatatttgggacaacatatttaattctctttgatatgcattgagatttgtttttgtctactaaatctacaatgt 33139508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 44376310 - 44376116
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  44376310 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 44376211  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| |||||||||||||||||||||||  |||||||| |||  ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  44376210 gttcgaattccaacatctgcatatatttgtgaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgt 44376116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 13 - 194
Target Start/End: Complemental strand, 45782660 - 45782478
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  45782660 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 45782561  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctacta 194  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| |||||||||||||    
T  45782560 gttcaaattccaacatcttcatatatttaggaccacatatttcattctctttgatatatattgagatttatttttgtctacta 45782478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 45977221 - 45977027
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  45977221 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 45977122  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||| ||||||| |||||| ||||    
T  45977121 gttcgaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgatatttatttttatctactacatctacgatgt 45977027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 19 - 206
Target Start/End: Original strand, 35760585 - 35760773
Alignment:
Q  19 atataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttcaa 117  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||  ||||||| |||||||| |    
T  35760585 atataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataattgtggtgtttgaggttcga 35760684  T
Q  118 attccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||| ||||| |||||||||||||||||||    
T  35760685 attccaacatctgcatatatttgggaccacatatttcattctctttgatatacattgagatttatttttatctactatatctacaatgt 35760773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 31628718 - 31628524
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatattttttgg-tgaataagcgtggtgtctgag 111  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||| ||||||| ||||    
T  31628718 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttaagatgaataagtgtggtgtatgag 31628619  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| |||||||||||||||||||||||  ||||||||||||  ||||||||||||||||||||||| ||||||||||||| | |||||||||||    
T  31628618 gttcgaattccaacatctgcatatatttgagaccacatatttaattctctttgatatgcattgagatatgtttttgtctacaacatctacaatgt 31628524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 41387124 - 41387318
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||  |||||||||| ||||||||||||    
T  41387124 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgatcgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 41387223  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| |||| || ||||||||||||||| ||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41387224 gttcgaatttcagcatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 41387318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 37591035 - 37590841
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  37591035 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacatgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 37590936  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| |||| |||||||||||||||||| ||||||||| |||  |||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  37590935 gttcgaatttcaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgattttgtctactacatctacaatgt 37590841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 13 - 192
Target Start/End: Complemental strand, 48118762 - 48118582
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||  |||||||| | ||||||| ||||    
T  48118762 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattggtaaaaattaatatttttaaggtgaatacgtgtggtgtttgag 48118663  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctac 192  Q
    |||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  48118662 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttatttttgtctac 48118582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 13 - 202
Target Start/End: Complemental strand, 52098422 - 52098231
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaat-aatatttttt-ggtgaataagcgtggtgtctga 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||  |||||||||| || ||||||||    
T  52098422 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaatttaatatttttaaggtgaataagtgttgtgtctga 52098323  T
Q  111 ggttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctaca 202  Q
     |||  ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| ||||    
T  52098322 agtttgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttatttttgtctactatatttaca 52098231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 39058588 - 39058394
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||  |||||||||| ||||| ||||||    
T  39058588 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacatgattgataaaaattaatatttttaaggtgaataagtgtggtatctgag 39058489  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| |||||||||||||  |||||||| |||||||||||||| |||||||||||||  ||| | ||||||||||||||||||||||||||||||    
T  39058488 gttcgaattccaacatcttgatatatttgggaccacatatttcattctctttgatatatattaaaatttgtttttgtctactatatctacaatgt 39058394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 47143031 - 47142837
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||| ||| ||||| ||||||||||||||||||||||||||||||||| || |||||||| ||||||||||  ||||||||||| |||||||||||    
T  47143031 ccaataatttaacattgagatataattttaacaaaagaatgaagtaacacacaatcgataaaaattaatatttttaaggtgaataagcatggtgtctgag 47142932  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||| |||||||||||||||||  |||||||||| || ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  47142931 gttcgaattctaacatctgcatatatttgagaccacatatgtcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgt 47142837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 18 - 181
Target Start/End: Complemental strand, 50229933 - 50229768
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaat-aatatttttt-ggtgaataagcgtggtgtctgaggttc 115  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||  ||||||||||  |||||||||||||||    
T  50229933 aatataacattgacatataattttaacaaaagaatgaagtaacacactattgataaaaaattaatatttttaaggtgaataagtatggtgtctgaggttc 50229834  T
Q  116 aaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttg 181  Q
     ||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||    
T  50229833 gaattccaacatctgcatatattttggaccacatgtttcattctctttgatatgcattgagatttg 50229768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 54624955 - 54625142
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| |||||||||||||||||||||| |||||||||||||      ||||||||| ||||||||||  |||||||||| ||||||||||||    
T  54624955 ccaataatataacattgacatataattttaacaaa-gaatgaagtaaca------tgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 54625047  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||  ||||||||||    
T  54625048 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattaagatttgtttttgtctactacgtctacaatgt 54625142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 50229766 - 50229712
Alignment:
Q  149 tatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaa 203  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  50229766 tatttcattctctttgatatgcattgagatttttttttgtctactacatctacaa 50229712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 12090773 - 12090730
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  12090773 aatataacattaacatataatttttacaaaagaatgaagtaaca 12090730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 16905261 - 16905218
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  16905261 aatataacattaacatataatttttacaaaagaatgaagtaaca 16905218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 16918201 - 16918158
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  16918201 aatataacattaacatataatttttacaaaagaatgaagtaaca 16918158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 30825235 - 30825192
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  30825235 aatataacattaacatataatttttacaaaagaatgaagtaaca 30825192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 31966282 - 31966239
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  31966282 aatataacattaacatataatttttacaaaagaatgaagtaaca 31966239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 89 - 136
Target Start/End: Complemental strand, 34684650 - 34684603
Alignment:
Q  89 ggtgaataagcgtggtgtctgaggttcaaattccaacatctgcatata 136  Q
    |||||||||| | |||||||||||||| ||||||||| ||||||||||    
T  34684650 ggtgaataagtggggtgtctgaggttcgaattccaacctctgcatata 34684603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 39058665 - 39058622
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  39058665 aatataacattaacatataatttttacaaaagaatgaagtaaca 39058622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 45977307 - 45977264
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  45977307 aatataacattaacatataatttttacaaaagaatgaagtaaca 45977264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 47143113 - 47143070
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  47143113 aatataacattaacatataatttttacaaaagaatgaagtaaca 47143070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 48118845 - 48118802
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  48118845 aatataacattaacatataatttttacaaaagaatgaagtaaca 48118802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 52098503 - 52098460
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  52098503 aatataacattaacatataatttttacaaaagaatgaagtaaca 52098460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 52434540 - 52434583
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  52434540 aatataacattaacatataatttttacaaaagaatgaagtaaca 52434583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 53143577 - 53143534
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  53143577 aatataacattaacatataatttttacaaaagaatgaagtaaca 53143534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 54624879 - 54624922
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  54624879 aatataacattaacatataatttttacaaaagaatgaagtaaca 54624922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 50230019 - 50229979
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagta 58  Q
    ||||||| ||| |||||||||||| ||||||||||||||||    
T  50230019 aatataacattaacatataatttttacaaaagaatgaagta 50229979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 167; Significance: 1e-89; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 3898420 - 3898614
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  3898420 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 3898519  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  3898520 gttcaaattccaacatctgcatatatttgggaccacatatttcattctctttaatatgcattgagatttgtttttgtctactatatctacaatgt 3898614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 12264198 - 12264392
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  12264198 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 12264297  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12264298 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 12264392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 38654158 - 38653964
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  38654158 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 38654059  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38654058 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 38653964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 43363842 - 43363648
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  43363842 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 43363743  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43363742 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 43363648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 49672560 - 49672754
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  49672560 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 49672659  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49672660 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 49672754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 54073025 - 54073219
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  54073025 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 54073124  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54073125 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 54073219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 1941951 - 1941757
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||    
T  1941951 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtgatgtctgag 1941852  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1941851 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 1941757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 21098302 - 21098496
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  21098302 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 21098401  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  21098402 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgt 21098496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 34121353 - 34121547
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  34121353 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 34121452  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34121453 gttcgaattccaacatctgcatatatttgggaccacgtatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 34121547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 49506580 - 49506386
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  49506580 ccaataatataatattgacatataattttaacaaaagaatgaagtaccacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 49506481  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49506480 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 49506386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 4584665 - 4584471
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  4584665 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 4584566  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  4584565 gttcaaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgt 4584471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 20671247 - 20671441
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  20671247 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 20671346  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  20671347 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgt 20671441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 26948796 - 26948990
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||  |||||||||| ||||||||||||    
T  26948796 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaagttaatatttttaaggtgaataagtgtggtgtctgag 26948895  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  26948896 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgt 26948990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 31488409 - 31488603
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  31488409 ccaataatataacattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 31488508  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  31488509 gttcgaattccaacatctgcatatatttgggacaacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgt 31488603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 36076685 - 36076491
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| |||||||||||     
T  36076685 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaa 36076586  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  36076585 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttaatatgcattgagatttgtttttgtctactacatctacaatgt 36076491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 13 - 204
Target Start/End: Complemental strand, 45558115 - 45557923
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  45558115 ccaataatataatattgacatataattttaacaaaagaatgaagtaatacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 45558016  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaat 204  Q
    |||| |||| ||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  45558015 gttcgaatttcaacatctgcatatacttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaat 45557923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 39146438 - 39146632
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  39146438 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 39146537  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  39146538 gttcgaattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatttatttttgtctactacatctacaatgt 39146632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 13 - 201
Target Start/End: Original strand, 24119205 - 24119394
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  24119205 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 24119304  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctac 201  Q
    |||  ||||||||||||||||||||||| |||||| ||||||| || ||||| |||||||||||||||||||||||||||||| ||||||    
T  24119305 gtttgaattccaacatctgcatatatttgggaccatatatttcattatctttaatatgcattgagatttgtttttgtctactacatctac 24119394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 49478206 - 49478400
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  49478206 ccaataatataacattgacatataattttaataaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 49478305  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||| ||||||||||| |||||||||||||| || ||||||||||| |||||||||||||||| |||||||  ||||||||||    
T  49478306 gttcgaattccaacatttgcatatatttgggaccacatatttcattatctttgatatgtattgagatttgtttttatctactacgtctacaatgt 49478400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 55041820 - 55041620
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaa------taatatttttt-ggtgaataagcgtggtg 105  Q
    |||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||       ||||||||||  |||||||||| ||||||    
T  55041820 ccaataatataacattgacatataattttaacaaaagagtgaagtaacacacgattgataaaaataaaaattaatatttttaaggtgaataagtgtggtg 55041721  T
Q  106 tctgaggttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatg 205  Q
    |||||||||| ||||| ||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  55041720 tctgaggttcgaattcaaacatctgcatatatttggaaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatg 55041621  T
Q  206 t 206  Q
    |    
T  55041620 t 55041620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 60 - 206
Target Start/End: Complemental strand, 40014837 - 40014690
Alignment:
Q  60 cacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttcaaattccaacatctgcatatatttaggaccacatatttcgttc 158  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||    
T  40014837 cacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattc 40014738  T
Q  159 tctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||    
T  40014737 tctttgatatgcattgagatttgtttttgtttattatatctacaatgt 40014690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 89 - 206
Target Start/End: Complemental strand, 26051457 - 26051339
Alignment:
Q  89 ggtgaataagcgtggtgtctgaggttcaaattccaacatctgcatatatttagg-accacatatttcgttctctttgatatgcattgagatttgtttttg 187  Q
    ||||||||||||||||||||||||||| ||||||||| || |||||||||| || |||||||||||| ||||||||||||||||||||||||||||||||    
T  26051457 ggtgaataagcgtggtgtctgaggttcgaattccaacctcagcatatatttggggaccacatatttcattctctttgatatgcattgagatttgtttttg 26051358  T
Q  188 tctactatatctacaatgt 206  Q
    ||||||| |||||||||||    
T  26051357 tctactacatctacaatgt 26051339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 26052309 - 26052236
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt 86  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  26052309 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttt 26052236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 141 - 206
Target Start/End: Complemental strand, 6460269 - 6460205
Alignment:
Q  141 ggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||||||||||||  |||| ||||||||| |||||||||||||||||||||||| |||||||||||    
T  6460269 ggaccacatattttattct-tttgatatgtattgagatttgtttttgtctactacatctacaatgt 6460205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 1942033 - 1941990
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  1942033 aatataacattaacatataatttttacaaaagaatgaagtaaca 1941990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 3898338 - 3898381
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  3898338 aatataacattaacatataatttttacaaaagaatgaagtaaca 3898381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 12264115 - 12264158
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  12264115 aatataacattaacatataatttttacaaaagaatgaagtaaca 12264158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 20671166 - 20671209
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  20671166 aatataacattaacatataatttttacaaaagaatgaagtaaca 20671209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 21098219 - 21098262
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  21098219 aatataacattaacatataatttttacaaaagaatgaagtaaca 21098262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 26052392 - 26052349
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  26052392 aatataacattaacatataatttttacaaaagaatgaagtaaca 26052349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 26948689 - 26948732
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  26948689 aatataacattaacatataatttttacaaaagaatgaagtaaca 26948732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 31488329 - 31488372
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  31488329 aatataacattaacatataatttttacaaaagaatgaagtaaca 31488372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 34121271 - 34121314
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  34121271 aatataacattaacatataatttttacaaaagaatgaagtaaca 34121314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 38654241 - 38654198
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  38654241 aatataacattaacatataatttttacaaaagaatgaagtaaca 38654198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 43363924 - 43363881
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  43363924 aatataacattaacatataatttttacaaaagaatgaagtaaca 43363881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 49478124 - 49478167
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  49478124 aatataacattaacatataatttttacaaaagaatgaagtaaca 49478167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 49672478 - 49672521
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  49672478 aatataacattaacatataatttttacaaaagaatgaagtaaca 49672521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 55041901 - 55041858
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  55041901 aatataacattaacatataatttttacaaaagaatgaagtaaca 55041858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 36076764 - 36076723
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaa 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||    
T  36076764 aatataacattaacatataatttttacaaaagaatgaagtaa 36076723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 167; Significance: 1e-89; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 41663235 - 41663429
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  41663235 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 41663334  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41663335 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 41663429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 41664508 - 41664702
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  41664508 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 41664607  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41664608 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 41664702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 6120550 - 6120744
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  6120550 ccaataatataatattgacatatagttttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 6120649  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6120650 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 6120744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 18351549 - 18351743
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||    
T  18351549 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtttgag 18351648  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18351649 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 18351743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 44902080 - 44902273
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatattttttggtgaataagcgtggtgtctgagg 112  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||   |||||| |||||||||||||||||||||||    
T  44902080 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattatattttttttgtgaataagcgtggtgtctgagg 44902179  T
Q  113 ttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    ||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44902180 ttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 44902273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 18 - 206
Target Start/End: Original strand, 20544828 - 20545017
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||| | ||||||     
T  20544828 aatataatattgacatataattttaacaaaagaatgaagtaccacacgattgataaaaattaatatttttttggtgaataagcgtggtgttttaggttcg 20544927  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    ||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  20544928 aattctaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctaccatatctacaatgt 20545017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 19596594 - 19596400
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||  |||||||||||||||||||||||    
T  19596594 ccaataatttaacattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatttttaaggtgaataagcgtggtgtctgag 19596495  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  19596494 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttaatatgcattgagatttgtttttgtctactacatctacaatgt 19596400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 31424007 - 31424201
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||  |||||||||| ||||||| ||||    
T  31424007 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatttttaaggtgaataagtgtggtgtatgag 31424106  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  31424107 gttcgaattccaacatctacatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgt 31424201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 42441958 - 42442156
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||| |||||||||||||||||||||||    
T  42441958 ccaataatataatattgacatataattttaacaaaagaatgaagtaacac--gattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 42442055  T
Q  112 gttcaaatt------ccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatg 205  Q
    |||| ||||      ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42442056 gttcgaattcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatg 42442155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 8700259 - 8700453
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||| ||  ||||||| ||||    
T  8700259 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaaaaaatgtggtgtatgag 8700358  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  8700359 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgaaatttgtttttgtctactacatctacaatgt 8700453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 26231490 - 26231296
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatattttttgg-tgaataagcgtggtgtctgag 111  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  | |||||||| ||||||||||||    
T  26231490 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaagatgaataagtgtggtgtctgag 26231391  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| |||||||||||||| ||||||||  ||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  26231390 gttcgaattccaacatctgaatatatttgagaccacatatttcattctctttgatatgcattgaaatttgtttttgtctactacatctacaatgt 26231296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 36279685 - 36279491
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||| ||||||    
T  36279685 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtatctgag 36279586  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
     ||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||| |||||||||||||||||| |||||||||||    
T  36279585 attcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatacattgatatttgtttttgtctactacatctacaatgt 36279491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 34007935 - 34007747
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||  |||| ||||| ||||||||||||||||     
T  34007935 aatataacattgacatataattttaacaaaagaatgaagtaacacacgatttataaaaattaatatttttaaggtggataagtgtggtgtctgaggttcg 34007836  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatg 205  Q
    |||||||||||| |||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  34007835 aattccaacatcggcatatatttgggactacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatg 34007747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 13 - 203
Target Start/End: Complemental strand, 999462 - 999271
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  999462 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 999363  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaa 203  Q
    |||| ||||||||||||| ||||||||| ||||||||| |||  ||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  999362 gttcgaattccaacatctacatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttatctactacatctacaa 999271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 42055197 - 42055389
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| |||||||||  || ||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  42055197 ccaataatataacattgacata--atcttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 42055294  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| ||| ||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  42055295 gttcgaattccaacatctgcatatatttgggatcacctatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgt 42055389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 28 - 202
Target Start/End: Original strand, 16214837 - 16215012
Alignment:
Q  28 tgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttcaaattccaaca 126  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||  |||||||||| |||||||  ||||||| |||||| |||    
T  16214837 tgacatataattttaacaaaagaatgaagtaacacacgattaataaaaattaatatttttaaggtgaataagtgtggtgttagaggttcgaattcctaca 16214936  T
Q  127 tctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctaca 202  Q
    | ||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||    
T  16214937 tttgcatatattttggaccacatatttcattctctttgatatgcattgagatttatttttgtctactacatctaca 16215012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 83 - 206
Target Start/End: Complemental strand, 27944956 - 27944833
Alignment:
Q  83 ttttttggtgaataagcgtggtgtctgaggttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgt 182  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  27944956 tttttttgtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgt 27944857  T
Q  183 ttttgtctactatatctacaatgt 206  Q
    ||||||||||||||||||||||||    
T  27944856 ttttgtctactatatctacaatgt 27944833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 89 - 206
Target Start/End: Complemental strand, 692356 - 692239
Alignment:
Q  89 ggtgaataagcgtggtgtctgaggttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgt 188  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||    
T  692356 ggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccatatatttcattctctttgatatgcattgagatttgtttttgt 692257  T
Q  189 ctactatatctacaatgt 206  Q
    |||||| || ||||||||    
T  692256 ctactacatttacaatgt 692239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 19596677 - 19596634
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||    
T  19596677 aatataacattaacatataattttaacaaaagaatgaagtaaca 19596634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 6120467 - 6120510
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  6120467 aatataacattaacatataatttttacaaaagaatgaagtaaca 6120510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 16214741 - 16214784
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  16214741 aatataacattaacatataatttttacaaaagaatgaagtaaca 16214784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 18351467 - 18351510
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  18351467 aatataacattaacatataatttttacaaaagaatgaagtaaca 18351510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 26231570 - 26231527
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  26231570 aatataacattaacatataatttttacaaaagaatgaagtaaca 26231527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 31423924 - 31423967
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  31423924 aatataacattaacatataatttttacaaaagaatgaagtaaca 31423967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 34008023 - 34007980
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  34008023 aatataacattaacatataatttttacaaaagaatgaagtaaca 34007980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 41663152 - 41663195
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  41663152 aatataacattaacatataatttttacaaaagaatgaagtaaca 41663195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 42441876 - 42441919
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  42441876 aatataacattaacatataatttttacaaaagaatgaagtaaca 42441919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 167; Significance: 1e-89; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 4266379 - 4266573
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  4266379 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 4266478  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4266479 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 4266573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 34888917 - 34888723
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  34888917 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 34888818  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34888817 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 34888723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 38913978 - 38913784
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  38913978 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 38913879  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38913878 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 38913784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 50151058 - 50151252
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  50151058 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 50151157  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50151158 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 50151252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 2951597 - 2951403
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  2951597 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 2951498  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||| || ||||| ||||||||    
T  2951497 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttttttttgtttattatatttacaatgt 2951403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 32 - 206
Target Start/End: Original strand, 1231813 - 1231988
Alignment:
Q  32 atataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttt-ttggtgaataagcgtggtgtctgaggttcaaattccaacatctg 130  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  1231813 atataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctg 1231912  T
Q  131 catatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  1231913 catatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatttacaatgt 1231988  T

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Target: chr1; HSP #7
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 13 - 201
Target Start/End: Original strand, 7333942 - 7334131
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatattttt-tggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||    
T  7333942 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttatggtgaataagtgtggtgtctgag 7334041  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctac 201  Q
    |||  ||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||    
T  7334042 gtttgaattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatttgtttttgtctactacatctac 7334131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 13 - 203
Target Start/End: Original strand, 39727978 - 39728169
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  39727978 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 39728077  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaa 203  Q
    |||| ||||||||||||||||||||||| ||||||||| |||  ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  39728078 gttcgaattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaa 39728169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 9216029 - 9216223
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  ||| |||||| ||||||||||||    
T  9216029 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtaaataagtgtggtgtctgag 9216128  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| ||||||||| |||  ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  9216129 gttcgaattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttatctactatatctacaatgt 9216223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 23482938 - 23482744
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||| ||||    
T  23482938 ccaataatataacgttgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttcaggtgaataagtgtggtgtatgag 23482839  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  23482838 gttcgaattccaacatctgcatatatttgggaccacatatttcatgctctttgatatgcattgagatttgtatttgtctactacatctacaatgt 23482744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 35614065 - 35614259
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||| |     
T  35614065 ccaataatatgacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttcaggtgaataagtgtggtgtcttaa 35614164  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  35614165 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatttacaatgt 35614259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 18706739 - 18706546
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatattttt-tggtgaataagcgtggtgtctgag 111  Q
    |||| |||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||  |||||||||| ||||||| ||||    
T  18706739 ccaataatataacgttgacatataattttaacaaaagaatgaagttacacacgattgataaaaattaatatttttcaggtgaataagtgtggtgtatgag 18706640  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  18706639 gttcgaattccaacatctgcatatattt-ggaccacatatttcattctctttgatatgcattaagatttgtttttgtctactacatctacaatgt 18706546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 26 - 204
Target Start/End: Original strand, 35614827 - 35615005
Alignment:
Q  26 attgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatattttttggtgaataagcgtggtgtctgaggttcaaattccaac 125  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||| |||||| |||||||||||||||| |||||||||    
T  35614827 attgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatattttaaggtaaataagtgtggtgtctgaggttcgaattccaac 35614926  T
Q  126 atctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaat 204  Q
    ||||||||||||||  ||||||||||||| |||||||||||||||||| |||||||||||||||||||| || ||||||    
T  35614927 atctgcatatatttgagaccacatatttcattctctttgatatgcattaagatttgtttttgtctactacatttacaat 35615005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 38444629 - 38444823
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| ||||||||||||||||| ||||||||||||||||||||  ||||||||||| ||||||||||  |||||||||| |||||||||||     
T  38444629 ccaataatataacattgacatataattttatcaaaagaatgaagtaacacattattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaa 38444728  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| |||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  38444729 gttcgaatttcaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgt 38444823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 18 - 206
Target Start/End: Complemental strand, 52687339 - 52687151
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttca 116  Q
    ||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||| ||||||||     
T  52687339 aatataacattgacatataattttaataaaaaaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgt-tgaggttcg 52687241  T
Q  117 aattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
     |||||||||||||||||||||| |||||||||||||| |||||||| ||| |||||||||||||||||||| ||||| |||||||||||    
T  52687240 gattccaacatctgcatatatttgggaccacatatttcattctctttcataggcattgagatttgtttttgtatactacatctacaatgt 52687151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 83 - 206
Target Start/End: Original strand, 50326070 - 50326193
Alignment:
Q  83 ttttttggtgaataagcgtggtgtctgaggttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgt 182  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  50326070 ttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgt 50326169  T
Q  183 ttttgtctactatatctacaatgt 206  Q
    ||||||||||||||||||||||||    
T  50326170 ttttgtctactatatctacaatgt 50326193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 18855463 - 18855270
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  18855463 ccaataatataacattgacatataattttaacaaaagaatgaagtaatacatgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 18855364  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| |||| |||||||| ||||||||| ||||||||| |||  ||||||||||||||||||||||||||  ||||||||||  |||||||||||    
T  18855363 gttcgaatttcaacatctacatatatttgggaccacatgttttattctctttgatatgcattgagatttg-atttgtctactgcatctacaatgt 18855270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 26 - 200
Target Start/End: Complemental strand, 19764768 - 19764593
Alignment:
Q  26 attgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgaggttcaaattccaa 124  Q
    |||||||| |||||||||||||| ||||||||||||||||||| ||||||| ||||||||||  |||||||||| |||||||||||||||| ||||| ||    
T  19764768 attgacatgtaattttaacaaaataatgaagtaacacacgattcataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattcaaa 19764669  T
Q  125 catctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatcta 200  Q
    ||| ||||||||||| |||||||||||||| |||| ||| |||||||||||||||||||||||| ||||| |||||    
T  19764668 catttgcatatatttgggaccacatatttcattctttttaatatgcattgagatttgtttttgtatactacatcta 19764593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 88 - 206
Target Start/End: Complemental strand, 31018355 - 31018237
Alignment:
Q  88 tggtgaataagcgtggtgtctgaggttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttg 187  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  31018355 tggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttg 31018256  T
Q  188 tctactatatctacaatgt 206  Q
    |||||||||||||||||||    
T  31018255 tctactatatctacaatgt 31018237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 13 - 152
Target Start/End: Original strand, 19768462 - 19768602
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatattttt-tggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||| ||||||||||||    
T  19768462 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttaagatgaataagtgtggtgtctgag 19768561  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatt 152  Q
    |||| || | |||||||| ||| ||||| | ||||||||||    
T  19768562 gttcgaaattcaacatctacatgtatttggaaccacatatt 19768602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 13 - 148
Target Start/End: Original strand, 2590333 - 2590468
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatattttt-tggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  2590333 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 2590432  T
Q  112 gttcaaattccaacatctgcatatatttaggaccaca 148  Q
    |||  ||||| ||||||||||||||||| | ||||||    
T  2590433 gtt-gaattcgaacatctgcatatatttggaaccaca 2590468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 126 - 206
Target Start/End: Original strand, 5061335 - 5061415
Alignment:
Q  126 atctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  5061335 atctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgt 5061415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 149 - 206
Target Start/End: Original strand, 29942153 - 29942210
Alignment:
Q  149 tatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29942153 tatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 29942210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 1231725 - 1231768
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  1231725 aatataacattaacatataatttttacaaaagaatgaagtaaca 1231768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 2951679 - 2951636
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  2951679 aatataacattaacatataatttttacaaaagaatgaagtaaca 2951636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 4266297 - 4266340
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  4266297 aatataacattaacatataatttttacaaaagaatgaagtaaca 4266340  T

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Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 18706816 - 18706773
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  18706816 aatataacattaacatataatttttacaaaagaatgaagtaaca 18706773  T

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Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 19764857 - 19764814
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  19764857 aatataacattaacatataatttttacaaaagaatgaagtaaca 19764814  T

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Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 19768382 - 19768425
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  19768382 aatataacattaacatataatttttacaaaagaatgaagtaaca 19768425  T

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Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 23483015 - 23482972
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  23483015 aatataacattaacatataatttttacaaaagaatgaagtaaca 23482972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 35613984 - 35614027
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  35613984 aatataaaattaacatataatttttacaaaagaatgaagtaaca 35614027  T

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Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 35614734 - 35614777
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  35614734 aatataacattaacatataatttttacaaaagaatgaagtaaca 35614777  T

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Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 38914060 - 38914017
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  38914060 aatataacattaacatataatttttacaaaagaatgaagtaaca 38914017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 52036353 - 52036310
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  52036353 aatataacattaacatataatttttacaaaagaatgaagtaaca 52036310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 7333863 - 7333903
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagta 58  Q
    ||||||| ||| |||||||||||| ||||||||||||||||    
T  7333863 aatataacattaacatataatttttacaaaagaatgaagta 7333903  T

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Target: scaffold0022 (Bit Score: 137; Significance: 1e-71; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 13 - 204
Target Start/End: Complemental strand, 149281 - 149089
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| || |||| |||     
T  149281 ccaataatataacgttgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgttgtgtttgat 149182  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaat 204  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  149181 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaat 149089  T

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Target: scaffold0022; HSP #2
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 149361 - 149318
Alignment:
Q  18 aatataatattgacatataattttaacaaaagaatgaagtaaca 61  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  149361 aatataacattaacatataatttttacaaaagaatgaagtaaca 149318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 19345 - 19539
Alignment:
Q  13 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttt-ggtgaataagcgtggtgtctgag 111  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  19345 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 19444  T
Q  112 gttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtctactatatctacaatgt 206  Q
    |||| ||||||||||||||||||||||| |||||||||||||  || ||||| |||||||||||||||||||||||||||||| |||||||||||    
T  19445 gttcgaattccaacatctgcatatatttgggaccacatatttaattatctttaatatgcattgagatttgtttttgtctactacatctacaatgt 19539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0836 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0836
Description:

Target: scaffold0836; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 91 - 206
Target Start/End: Complemental strand, 5430 - 5315
Alignment:
Q  91 tgaataagcgtggtgtctgaggttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtct 190  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  5430 tgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtct 5331  T
Q  191 actatatctacaatgt 206  Q
    | ||||||||||||||    
T  5330 attatatctacaatgt 5315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 91 - 206
Target Start/End: Complemental strand, 6213 - 6098
Alignment:
Q  91 tgaataagcgtggtgtctgaggttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtct 190  Q
    |||||||| ||||||| |||||||| |||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  6213 tgaataagtgtggtgtttgaggttcgaattccaacatctgcatatatttgagaccacatatttcattctctttgatatgcattgagatatgtttttgtct 6114  T
Q  191 actatatctacaatgt 206  Q
    || | |||||||||||    
T  6113 acaacatctacaatgt 6098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 91 - 206
Target Start/End: Complemental strand, 6223 - 6108
Alignment:
Q  91 tgaataagcgtggtgtctgaggttcaaattccaacatctgcatatatttaggaccacatatttcgttctctttgatatgcattgagatttgtttttgtct 190  Q
    |||||||| ||||||| |||||||| |||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  6223 tgaataagtgtggtgtttgaggttcgaattccaacatctgcatatatttgagaccacatatttcattctctttgatatgcattgagatatgtttttgtct 6124  T
Q  191 actatatctacaatgt 206  Q
    || | |||||||||||    
T  6123 acaacatctacaatgt 6108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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