View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8208A_low_60 (Length: 370)

Name: NF8208A_low_60
Description: NF8208A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8208A_low_60
NF8208A_low_60
[»] chr7 (7 HSPs)
chr7 (1-370)||(14343748-14344117)
chr7 (1-358)||(18172737-18173094)
chr7 (112-370)||(18134627-18134885)
chr7 (1-358)||(15763749-15764105)
chr7 (21-358)||(11978024-11978361)
chr7 (1-118)||(18139895-18140012)
chr7 (220-265)||(7950120-7950165)
[»] chr3 (9 HSPs)
chr3 (1-370)||(14694318-14694687)
chr3 (1-370)||(13307967-13308336)
chr3 (1-370)||(10780910-10781279)
chr3 (1-370)||(10149521-10149890)
chr3 (30-173)||(16467062-16467205)
chr3 (30-173)||(16470895-16471038)
chr3 (1-103)||(15201042-15201144)
chr3 (1-148)||(14135452-14135599)
chr3 (1-86)||(15240246-15240331)
[»] chr8 (5 HSPs)
chr8 (1-370)||(17423946-17424315)
chr8 (1-370)||(22349856-22350225)
chr8 (1-358)||(22066494-22066851)
chr8 (62-370)||(15912931-15913239)
chr8 (63-265)||(24972384-24972586)
[»] chr1 (3 HSPs)
chr1 (1-368)||(41381417-41381784)
chr1 (1-370)||(22806929-22807298)
chr1 (75-364)||(21166246-21166535)
[»] chr4 (3 HSPs)
chr4 (1-358)||(13290471-13290828)
chr4 (1-370)||(14773659-14774028)
chr4 (3-346)||(18564918-18565261)
[»] chr2 (8 HSPs)
chr2 (1-358)||(22637051-22637408)
chr2 (1-358)||(23201730-23202087)
chr2 (1-358)||(23675571-23675928)
chr2 (1-358)||(24910629-24910986)
chr2 (1-364)||(23815637-23816000)
chr2 (210-265)||(17163518-17163573)
chr2 (1-88)||(25117532-25117619)
chr2 (6-87)||(19118898-19118979)
[»] scaffold0130 (1 HSPs)
scaffold0130 (1-358)||(37335-37692)
[»] chr5 (3 HSPs)
chr5 (1-358)||(21509723-21510080)
chr5 (1-356)||(26271951-26272305)
chr5 (1-103)||(22853604-22853706)
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-358)||(16129-16486)
[»] chr6 (6 HSPs)
chr6 (1-358)||(23433831-23434187)
chr6 (1-370)||(19036269-19036637)
chr6 (1-358)||(1552270-1552626)
chr6 (1-241)||(16211719-16211959)
chr6 (15-181)||(19270432-19270598)
chr6 (1-68)||(17801880-17801947)
[»] scaffold0080 (1 HSPs)
scaffold0080 (1-358)||(4307-4664)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-370)||(127815-128183)
[»] scaffold0040 (1 HSPs)
scaffold0040 (1-370)||(28414-28773)
[»] scaffold0108 (1 HSPs)
scaffold0108 (1-358)||(24941-25298)
[»] scaffold0023 (3 HSPs)
scaffold0023 (1-358)||(64065-64422)
scaffold0023 (1-358)||(73243-73600)
scaffold0023 (1-154)||(4723-4876)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-370)||(65702-66071)
[»] scaffold0064 (1 HSPs)
scaffold0064 (1-358)||(38697-39053)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-358)||(140066-140423)
[»] scaffold0656 (1 HSPs)
scaffold0656 (1-358)||(3775-4132)
[»] scaffold0282 (1 HSPs)
scaffold0282 (1-370)||(6630-6999)
[»] scaffold0019 (1 HSPs)
scaffold0019 (1-358)||(160170-160527)
[»] scaffold0423 (1 HSPs)
scaffold0423 (30-358)||(3865-4193)
[»] scaffold0046 (1 HSPs)
scaffold0046 (31-308)||(32515-32791)
[»] scaffold0740 (1 HSPs)
scaffold0740 (1-182)||(280-461)
[»] scaffold0362 (1 HSPs)
scaffold0362 (30-299)||(13232-13501)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-358)||(180407-180764)
[»] scaffold0029 (1 HSPs)
scaffold0029 (1-364)||(68765-69128)
[»] scaffold0013 (6 HSPs)
scaffold0013 (1-358)||(146525-146882)
scaffold0013 (1-346)||(82514-82859)
scaffold0013 (1-346)||(120186-120531)
scaffold0013 (121-358)||(147685-147922)
scaffold0013 (1-125)||(133280-133404)
scaffold0013 (1-125)||(137809-137933)
[»] scaffold0319 (1 HSPs)
scaffold0319 (1-181)||(8620-8800)
[»] scaffold0053 (1 HSPs)
scaffold0053 (30-358)||(43383-43711)
[»] scaffold0008 (1 HSPs)
scaffold0008 (16-346)||(134699-135029)
[»] scaffold0241 (1 HSPs)
scaffold0241 (273-370)||(10479-10576)
[»] scaffold1714 (1 HSPs)
scaffold1714 (30-88)||(1387-1445)
[»] scaffold0757 (1 HSPs)
scaffold0757 (1-87)||(1868-1954)
[»] scaffold0401 (1 HSPs)
scaffold0401 (17-109)||(1397-1489)


Alignment Details
Target: chr7 (Bit Score: 318; Significance: 1e-179; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 14344117 - 14343748
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    ||||||||||  |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||    
T  14344117 tagattattccgtccgaaagaaattggatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagtggaaagactcaaggctgaaaa 14344018  T
Q  101 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14344017 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagat 14343918  T
Q  201 agcgaagtaaatctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagagcccaaaaatgata 300  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||    
T  14343917 agcgaaataaatctcgcggaattaaaagatgggccaccttacacttgtaaaatgttaaggccatcaaacggaaaaaacgtagaagagcccaaaaatgata 14343818  T
Q  301 aatatcccccaagaacttatacttttgatgtgtctaaatgtgaagaaatatttgatctattagttgctga 370  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  14343817 aatatccccccaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttgctga 14343748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 358
Target Start/End: Complemental strand, 18173094 - 18172737
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    ||||||||||| | ||||||||| | || ||||||||||||||||| ||||||||| |||||||||| || |||||||| ||||||||||||||||| ||    
T  18173094 tagattattctgttcgaaagaaagtagatacacaatatcttagggatatggcgcaattagcagatagggttcgccaagttgaaagactcaaggctgaaaa 18172995  T
Q  101 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagat 200  Q
    ||| || ||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||| |||||||||||||||||||  |||||||| ||||||    
T  18172994 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactgaggatagtgagccagaattcgattggggttcagattctgtagaagat 18172895  T
Q  201 agcgaagtaaatctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagagcccaaaaatgata 300  Q
    | |||| ||||||| || ||||| ||||||||||||||||||||||| |||||||| ||||||||||| || |||||||||||||| |||||||||||||    
T  18172894 aacgaaataaatcttgcagaattgaaagatgggccgccttacacttgcaaattattgaggccatcaaatggaaaaaacgtagaagaacccaaaaatgata 18172795  T
Q  301 aatatcccccaagaacttatacttttgatgtgtctaaatgtgaagaaatatttgatct 358  Q
    | |||||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  18172794 agtatcccccgaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatct 18172737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 112 - 370
Target Start/End: Complemental strand, 18134885 - 18134627
Alignment:
Q  112 ataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagatagcgaagtaaa 211  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||| ||||| ||||||||||||||    
T  18134885 ataggttccctaagaaagaaaaagttgcttatatcgaagctggggatagtgagccagagttcgattggggtttcgattccgtcgaggatagcgaagtaaa 18134786  T
Q  212 tctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagagcccaaaaatgataaatatccccca 311  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  18134785 tctcgcgaaattaaaagatgggccgccttacacttgtaaattgttaaggccatcaaacggaaaaaacgtagaagagtccaaaaatgataaatatccccca 18134686  T
Q  312 agaacttatacttttgatgtgtctaaatgtgaagaaatatttgatctattagttgctga 370  Q
    | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18134685 aaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttgctga 18134627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 1 - 358
Target Start/End: Original strand, 15763749 - 15764105
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    ||||||||||||| ||||||||| | || ||||||||||||||||| ||||| ||| ||||||||||||||||||| || || ||||| |||||||| ||    
T  15763749 tagattattctattcgaaagaaactagatacacaatatcttagggatatggcacaattagcagatagagtccgcca-gttgagagacttaaggctgaaaa 15763847  T
Q  101 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagat 200  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||| ||||||||||||||||| |  |||||||| || |||    
T  15763848 agccagaacaaataggttccctaagaaagaaaaaattgcttatatcgatactggagatagtgagccagaattcgattggggatcagattctgttgaggat 15763947  T
Q  201 agcgaagtaaatctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagagcccaaaaatgata 300  Q
    | ||||||||||||||| |||||||||||||| |||||||| |||||||| ||| |||||||||  || || |||||  ||||||| || ||||||||||    
T  15763948 aacgaagtaaatctcgcagaattaaaagatggaccgccttatacttgtaagttactaaggccattgaatggaaaaaatatagaagaacctaaaaatgata 15764047  T
Q  301 aatatcccccaagaacttatacttttgatgtgtctaaatgtgaagaaatatttgatct 358  Q
    | |||||||||| ||| |||| ||||||||| |||||||||||||| || ||||||||    
T  15764048 agtatcccccaaaaacatatagttttgatgtatctaaatgtgaagagatttttgatct 15764105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 21 - 358
Target Start/End: Complemental strand, 11978361 - 11978024
Alignment:
Q  21 aaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaaagccaggacaaataggttcc 120  Q
    ||||| || ||||||||||||||||| ||||| ||| |||||||||||||| ||||||  ||||| || |||||||| ||||||||||||||||||||||    
T  11978361 aaattagatacacaatatcttagggatatggcacaattagcagatagagtctgccaagctgaaaggcttaaggctgaaaaagccaggacaaataggttcc 11978262  T
Q  121 ctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagatagcgaagtaaatctcgcgga 220  Q
    ||||||||||||| |||||||||||||| ||| | |||||||| ||||||||||||||||| |  || ||||| || |||| |||| ||||||| || ||    
T  11978261 ctaagaaagaaaaggttgcttatatcgatactcgagatagtgatccagaattcgattggggatctgagtctgttgatgataacgaaataaatcttgcaga 11978162  T
Q  221 attaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagagcccaaaaatgataaatatcccccaagaacttat 320  Q
    |||||||||||||||| |||| |||||||| ||| ||||| ||||||| || |||||  | ||||| || |||||||||||||||||||| | ||| |||    
T  11978161 attaaaagatgggccggcttatacttgtaagttactaaggtcatcaaatggaaaaaatctggaagaacctaaaaatgataaatatcccccgaaaacatat 11978062  T
Q  321 acttttgatgtgtctaaatgtgaagaaatatttgatct 358  Q
    ||||||||||| |||||||||||||| || ||||||||    
T  11978061 acttttgatgtatctaaatgtgaagagatttttgatct 11978024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 18140012 - 18139895
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    ||||||||||| | ||||||||||| || |||||||| ||||| |||||||| ||| |||||||||||||||||||||| ||||||||||| ||||| ||    
T  18140012 tagattattctgttcgaaagaaattagatacacaataccttagagacatggcacaattagcagatagagtccgccaagttgaaagactcaaagctgaaaa 18139913  T
Q  101 agccaggacaaataggtt 118  Q
    ||||||||||||||||||    
T  18139912 agccaggacaaataggtt 18139895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 265
Target Start/End: Original strand, 7950120 - 7950165
Alignment:
Q  220 aattaaaagatgggccgccttacacttgtaaattattaaggccatc 265  Q
    |||||||| ||||||| |||||||| ||||||||||| ||||||||    
T  7950120 aattaaaacatgggcctccttacacatgtaaattattgaggccatc 7950165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 314; Significance: 1e-177; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 14694687 - 14694318
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    ||||||||||| |||||||||||||||| | |||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| ||    
T  14694687 tagattattctgtccgaaagaaattggatatacaataccttagggatatggcgcaattagcagatagagtccgccaagtggaaagactcaaggctgaaaa 14694588  T
Q  101 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  14694587 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggaaagtgagccagaattcgattggggtttcgattctgtcgaagat 14694488  T
Q  201 agcgaagtaaatctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagagcccaaaaatgata 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  14694487 agcgaagtaaatctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagaacccaaaaatgata 14694388  T
Q  301 aatatcccccaagaacttatacttttgatgtgtctaaatgtgaagaaatatttgatctattagttgctga 370  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||    
T  14694387 aatatcccccaaaaacttatacttttgatgtgtctaagtgtgaagaaatattcgatcttttagttgctga 14694318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 13308336 - 13307967
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    ||||||||||| | ||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||    
T  13308336 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 13308237  T
Q  101 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagat 200  Q
    |||||| || |||||||||||||||||||| ||||||||||||||||| ||| |||||||||| ||||||||||||||||||| ||||||||| ||||||    
T  13308236 agccagaacgaataggttccctaagaaagagaaagttgcttatatcgatactagggatagtgagccagaattcgattggggttccgattctgtagaagat 13308137  T
Q  201 agcgaagtaaatctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagagcccaaaaatgata 300  Q
    | |||| |||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||| |||||| |||||||||||||    
T  13308136 aacgaaataaatctcgcagaattaaaagatgggccgccttacacttgcaaattattgaggccatcaaatgggaaaaacgcagaagaacccaaaaatgata 13308037  T
Q  301 aatatcccccaagaacttatacttttgatgtgtctaaatgtgaagaaatatttgatctattagttgctga 370  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  13308036 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttgctga 13307967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 1 - 370
Target Start/End: Original strand, 10780910 - 10781279
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    ||||||||||  |||||||||||||||| |||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||    
T  10780910 tagattattccgtccgaaagaaattggatacacaataccttagggacatggcacaattagcagatagagtccgccaagtggaaagactcaaggctgaaaa 10781009  T
Q  101 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagat 200  Q
     |||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||| || || ||     
T  10781010 ggccaggacaaatagattccctaagaaagaaaaagttggttacatcgaaactggggatagtgagccagaattcgattggggtttcgattccgttgaggac 10781109  T
Q  201 agcgaagtaaatctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagagcccaaaaatgata 300  Q
    |||||| ||||||||||||| |||||||| ||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||| |||    
T  10781110 agcgaaataaatctcgcggagttaaaagaagggccgccttacacttgcaaattgttaaggccatcaaacggaaaaaacgtagaagagcccaaaaattata 10781209  T
Q  301 aatatcccccaagaacttatacttttgatgtgtctaaatgtgaagaaatatttgatctattagttgctga 370  Q
    |||||||| ||| ||||||||| |||||||| |||||| | ||||||||||||||||| |||||||||||    
T  10781210 aatatccctcaaaaacttatacgtttgatgtatctaaaagcgaagaaatatttgatcttttagttgctga 10781279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 1 - 370
Target Start/End: Original strand, 10149521 - 10149890
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    ||||||||||| | ||||||||||| || ||||||||||||||||||||||||||| |||||||||| || |||||||| || ||||| |||||||| ||    
T  10149521 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagggttcgccaagtcgagagacttaaggctgaaaa 10149620  T
Q  101 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagat 200  Q
    |||||  ||||||||||||||||||||||| ||||||||||||||||| ||| | |||||||| ||||||||||||||||| |  |||||||| ||||||    
T  10149621 agccaaaacaaataggttccctaagaaagagaaagttgcttatatcgatactagagatagtgagccagaattcgattggggatcagattctgtagaagat 10149720  T
Q  201 agcgaagtaaatctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagagcccaaaaatgata 300  Q
    | |||| ||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| || ||||||||||    
T  10149721 aacgaaataaatcttgcagaattaaaagatgggccgccttacacttgtaaattgttaaggccatcaaatgggaaaaacgtagaagaaccaaaaaatgata 10149820  T
Q  301 aatatcccccaagaacttatacttttgatgtgtctaaatgtgaagaaatatttgatctattagttgctga 370  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  10149821 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttctagttgctga 10149890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 30 - 173
Target Start/End: Original strand, 16467062 - 16467205
Alignment:
Q  30 acacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaaagccaggacaaataggttccctaagaaag 129  Q
    ||||||||||||||||| ||||| ||| |||||||||||||||||||||| |||||||| |||||| | |||||||  |||||||||||||||||||||     
T  16467062 acacaatatcttagggatatggcacaattagcagatagagtccgccaagttgaaagacttaaggctaaaaaagccaaaacaaataggttccctaagaaac 16467161  T
Q  130 aaaaagttgcttatatcgaaactggggatagtgaaccagaattc 173  Q
    ||||||||||||||||||| ||| | |||||||| |||||||||    
T  16467162 aaaaagttgcttatatcgatactagagatagtgagccagaattc 16467205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 30 - 173
Target Start/End: Complemental strand, 16471038 - 16470895
Alignment:
Q  30 acacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaaagccaggacaaataggttccctaagaaag 129  Q
    ||||||||||||||||| ||||| ||| |||||||||||||||||||||| |||||||| |||||| | |||||||  |||||||||||||||||||||     
T  16471038 acacaatatcttagggatatggcacaattagcagatagagtccgccaagttgaaagacttaaggctaaaaaagccaaaacaaataggttccctaagaaac 16470939  T
Q  130 aaaaagttgcttatatcgaaactggggatagtgaaccagaattc 173  Q
    ||||||||||||||||||| ||| | |||||||| |||||||||    
T  16470938 aaaaagttgcttatatcgatactagagatagtgagccagaattc 16470895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 15201042 - 15201144
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    |||| |||||||| | ||||||||| || |  |||||||| || || ||||| ||| |||||||||||||||| ||||| |||||||| || ||||| ||    
T  15201042 tagactattctattcaaaagaaattagatatgcaatatctaagagatatggcacaattagcagatagagtccgacaagtcgaaagacttaaagctgaaaa 15201141  T
Q  101 agc 103  Q
    |||    
T  15201142 agc 15201144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 14135452 - 14135599
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    |||| |||||||| | ||||||| | || ||||||||||| || || ||||| ||| |||| ||||||||| | ||||| | |||||| || | ||| ||    
T  14135452 tagactattctattcaaaagaaactagatacacaatatctaagagatatggcacaattagctgatagagtctgacaagtcggaagacttaaagatgaaaa 14135551  T
Q  101 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcga 148  Q
    ||| ||||| |||||||||  ||| ||| |||| ||||| ||| ||||    
T  14135552 agcaaggactaataggttcggtaaaaaataaaaggttgcgtatgtcga 14135599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 15240246 - 15240331
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaaga 86  Q
    |||| |||||||| | ||||||||| || |  |||||||| || || || |||||| |||||||||||||||| ||||| ||||||    
T  15240246 tagactattctattcaaaagaaattagatatgcaatatctaagagatatagcgcaattagcagatagagtccgacaagtcgaaaga 15240331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 262; Significance: 1e-146; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 17424315 - 17423946
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    ||||||||||| | ||||||||||| || ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||    
T  17424315 tagattattctgttcgaaagaaattagatacacagtatcttagggacatggcgcaattagcagatagagtccgccaagtggaaagactcaaggctgaaaa 17424216  T
Q  101 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagat 200  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||  | ||||||| || |||    
T  17424215 agccagaacaaataggttccccaagaaagaaaaagttgcttatatcgatactggggatagtgaaccaaaattcgattggggtcacaattctgtagaggat 17424116  T
Q  201 agcgaagtaaatctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagagcccaaaaatgata 300  Q
    |||||| |||||||||| |||||||| ||| |||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |    
T  17424115 agcgaaataaatctcgcagaattaaaggataggccgccttacatttgcaaattattgaggccatcaaacgggaaaaacgtagaagagcccaaaaatgaca 17424016  T
Q  301 aatatcccccaagaacttatacttttgatgtgtctaaatgtgaagaaatatttgatctattagttgctga 370  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  17424015 aatatcccccaaaaacttatacttttgatgtatctaaatgtgaagaaatatttgatcttttagttgctga 17423946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 22350225 - 22349856
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    ||||||||||| | ||||||||||| || ||||||||||||||||| ||||||||  |||||||||| || |||||||| || ||||| |||||||| ||    
T  22350225 tagattattctgttcgaaagaaattagatacacaatatcttagggatatggcgcagttagcagatagggttcgccaagtcgagagacttaaggctgaaaa 22350126  T
Q  101 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagat 200  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||| |  |||||||| ||||||    
T  22350125 agccagaacaaataggttccctaagaaagaaaaagttgcttatatcgatactggagatagtgagccagaattcgattggggatcagattctgttgaagat 22350026  T
Q  201 agcgaagtaaatctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagagcccaaaaatgata 300  Q
    | |||  ||||||| || ||||||||||||||||||||||| |||||||| ||||||||||||| ||| || ||||||||||||||| ||||||||||||    
T  22350025 aacgagataaatcttgcagaattaaaagatgggccgccttatacttgtaagttattaaggccataaaatggaaaaaacgtagaagagtccaaaaatgata 22349926  T
Q  301 aatatcccccaagaacttatacttttgatgtgtctaaatgtgaagaaatatttgatctattagttgctga 370  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||    
T  22349925 aatatcccccaaaaacttatacttttgatgtatctaaatgtgaagaaatatttgatctcctagttgctga 22349856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 1 - 358
Target Start/End: Original strand, 22066494 - 22066851
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    |||| |||||| | || |||||||| || ||||||||||||||||| ||||| ||| |||||||||||||||||||||| |||||  | |||||||| ||    
T  22066494 tagactattctgttcggaagaaattagatacacaatatcttagggatatggcacaattagcagatagagtccgccaagttgaaaggtttaaggctgaaaa 22066593  T
Q  101 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagat 200  Q
    ||||||||||||||||||||||||||||||||  ||||||||||| || ||||| |||||||| ||||||||||||||||| |   | ||||| || |||    
T  22066594 agccaggacaaataggttccctaagaaagaaatggttgcttatatagatactggagatagtgatccagaattcgattggggatctaaatctgttgatgat 22066693  T
Q  201 agcgaagtaaatctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagagcccaaaaatgata 300  Q
    | |||| |||||||||| ||||||||||||||||| ||||| |||||||| ||| ||||||||||||| || |||||  ||||||| || ||||||||||    
T  22066694 aacgaaataaatctcgcagaattaaaagatgggccaccttatacttgtaagttactaaggccatcaaatggaaaaaatctagaagaacctaaaaatgata 22066793  T
Q  301 aatatcccccaagaacttatacttttgatgtgtctaaatgtgaagaaatatttgatct 358  Q
    |||||||||| | ||| |||||||||||||| |||||||||||||| || ||||||||    
T  22066794 aatatcccccgataacatatacttttgatgtatctaaatgtgaagagatttttgatct 22066851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 370
Target Start/End: Original strand, 15912931 - 15913239
Alignment:
Q  62 agatagagtccgccaagtggaaagactcaaggctgagaaagccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagt 161  Q
    |||||||||| | || || ||||| || |||||||||||| ||||||||||||||||  |||| ||||||||| | || ||| | || ||    || |||    
T  15912931 agatagagtctgacaggtcgaaaggcttaaggctgagaaatccaggacaaataggtttgctaaaaaagaaaaaatagcctatgttgatacatatgacagt 15913030  T
Q  162 gaaccagaattcgattggggtttcgattctgtcgaagatagcgaagtaaatctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggc 261  Q
    || || |||||||||| ||| |  ||| ||||||||||||  ||  | |||||||| ||||||||||||||||| | |||  | |||||| | |||||||    
T  15913031 gatcctgaattcgattagggatcagatactgtcgaagataatgagattaatctcgcagaattaaaagatgggcctctttatgcatgtaaactgttaaggc 15913130  T
Q  262 catcaaacgggaaaaacgtagaagagcccaaaaatgataaatatcccccaagaacttatacttttgatgtgtctaaatgtgaagaaatatttgatctatt 361  Q
    |||| || || |||||    ||||| || || ||||| ||||| || || | ||| ||||  |||||||| ||||| || || ||||| |||||||| ||    
T  15913131 catcgaatggaaaaaatcctgaagaaccaaagaatgacaaataccctcctaaaacatatatctttgatgtttctaagtgcgaggaaatctttgatctttt 15913230  T
Q  362 agttgctga 370  Q
     ||||||||    
T  15913231 ggttgctga 15913239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 63 - 265
Target Start/End: Complemental strand, 24972586 - 24972384
Alignment:
Q  63 gatagagtccgccaagtggaaagactcaaggctgagaaagccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtg 162  Q
    ||||| ||||| ||||| |||||||| |||||| ||||||| ||||||| || ||||  ||| ||||||||||| |||||  |||| ||||  || ||||    
T  24972586 gatagggtccgacaagtcgaaagacttaaggctaagaaagcaaggacaagtaagttcagtaaaaaagaaaaagtcgcttacgtcgacactgatgacagtg 24972487  T
Q  163 aaccagaattcgattggggtttcgattctgtcgaagatagcgaagtaaatctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggcc 262  Q
    | ||| |||||||||    ||| |||  ||||||| ||||||| || ||||||||  | ||||||  ||| || ||||| ||||||||| | || |||||    
T  24972486 atccataattcgatttaaattttgatcatgtcgaaaatagcgaggttaatctcgcaaagttaaaacctggccctccttatacttgtaaagttttgaggcc 24972387  T
Q  263 atc 265  Q
    |||    
T  24972386 atc 24972384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 252; Significance: 1e-140; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 1 - 368
Target Start/End: Complemental strand, 41381784 - 41381417
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    ||||||||||  |||||||||||||||| |||||||| ||||| |||||||| ||| ||||| |||| ||||||||||||||||||||||||||||| ||    
T  41381784 tagattattccgtccgaaagaaattggatacacaataccttagagacatggcacaattagcaaatagggtccgccaagtggaaagactcaaggctgaaaa 41381685  T
Q  101 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagat 200  Q
     ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||| || || |||    
T  41381684 ggccaggacaaataggttccctaagaaagataaagttgcttacatcgaaactggggatagtgagccagaattcgattggggtttcaattccgttgaggat 41381585  T
Q  201 agcgaagtaaatctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagagcccaaaaatgata 300  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||  ||||||||||||| ||||||||||||||| ||||||||||||||||| ||||    
T  41381584 agcgaagtaaatctcgcggagttaaaagaggggccgccttacactttcaaattattaaggcaatcaaacgggaaaaatgtagaagagcccaaaaacgata 41381485  T
Q  301 aatatcccccaagaacttatacttttgatgtgtctaaatgtgaagaaatatttgatctattagttgct 368  Q
    |||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||| |||||||||    
T  41381484 aatatcccccaaaaacttatacttttgatgtatctaaatgcgaagaaatatttgatcttttagttgct 41381417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 22807298 - 22806929
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    ||||||||||| | | ||||||||| || ||||| ||||||||||| ||||||||| |||||||||| || |||||||| || ||||| || ||||| ||    
T  22807298 tagattattctgttcaaaagaaattagatacacagtatcttagggatatggcgcaattagcagatagggttcgccaagtcgagagacttaaagctgaaaa 22807199  T
Q  101 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagat 200  Q
     ||||| ||||||||||||||||||||||||||||| |||||| |||| ||||| |||||||| ||| ||||||||||||| | ||||||||| ||||||    
T  22807198 ggccagaacaaataggttccctaagaaagaaaaagtcgcttatgtcgatactggagatagtgagccaaaattcgattggggatccgattctgttgaagat 22807099  T
Q  201 agcgaagtaaatctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagagcccaaaaatgata 300  Q
    | |||| ||||||| || ||||| ||||||||||| ||||| |||||||| ||||||||||||||||| || ||||||||||||||  | ||||||||||    
T  22807098 aacgaaataaatcttgcagaattgaaagatgggccaccttatacttgtaagttattaaggccatcaaatggaaaaaacgtagaagaatctaaaaatgata 22806999  T
Q  301 aatatcccccaagaacttatacttttgatgtgtctaaatgtgaagaaatatttgatctattagttgctga 370  Q
    |||||||||| | |||||||||||| ||||| || |||||||||||||||||||||||  ||||||||||    
T  22806998 aatatcccccgaaaacttatactttcgatgtatccaaatgtgaagaaatatttgatcttctagttgctga 22806929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 75 - 364
Target Start/End: Complemental strand, 21166535 - 21166246
Alignment:
Q  75 caagtggaaagactcaaggctgagaaagccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcg 174  Q
    ||||| ||||| || ||||||||||||||| ||| |||||| ||||||||||| || |||||||| ||| | || || || || ||||| ||||||||||    
T  21166535 caagtcgaaaggcttaaggctgagaaagcccggagaaatagattccctaagaaggagaaagttgcctatgtggataccggagacagtgatccagaattcg 21166436  T
Q  175 attggggtttcgattctgtcgaagatagcgaagtaaatctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaa 274  Q
    ||||||| |  ||| ||||||||||||  ||| |||||||||| ||||||||||||||||| ||||| || || |||||||||||||||||||| || ||    
T  21166435 attgggggtcagatactgtcgaagataatgaaataaatctcgcagaattaaaagatgggccaccttatacctgcaaattattaaggccatcaaatggcaa 21166336  T
Q  275 aaacgtagaagagcccaaaaatgataaatatcccccaagaacttatacttttgatgtgtctaaatgtgaagaaatatttgatctattagt 364  Q
    ||||   ||||| || |||||||| |||||||| || | ||| ||||| |||||||| |||||||||||||| || || ||||| |||||    
T  21166335 aaaccatgaagaacctaaaaatgacaaatatcctccgaaaacatatacctttgatgtttctaaatgtgaagagatcttcgatcttttagt 21166246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 242; Significance: 1e-134; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 358
Target Start/End: Complemental strand, 13290828 - 13290471
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    ||||||||||| | ||||||||||| || ||||||||| ||||||||||||||||| |||||||||| || |||||||| |||||||| |||||||| ||    
T  13290828 tagattattctgttcgaaagaaattagatacacaatatattagggacatggcgcaattagcagatagggttcgccaagtcgaaagacttaaggctgaaaa 13290729  T
Q  101 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagat 200  Q
     ||||| ||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||  |||||||  || |||    
T  13290728 ggccagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggagatagtgaaccagaattcgattggggttcagattctggagaggat 13290629  T
Q  201 agcgaagtaaatctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagagcccaaaaatgata 300  Q
    | |||| ||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||    
T  13290628 aacgaaataaatcttgcagaattaaaagatgggccgccttacacttgtaaattattgaggccatcaaatgggaaaaacgtagaagaacccaaaaatgata 13290529  T
Q  301 aatatcccccaagaacttatacttttgatgtgtctaaatgtgaagaaatatttgatct 358  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  13290528 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatct 13290471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 14774028 - 14773659
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    ||||||||||||| ||||||||||| || ||||||||||||||||| ||||||||| |||||||||| || |||||||| || ||||| || ||||| ||    
T  14774028 tagattattctattcgaaagaaattagatacacaatatcttagggatatggcgcaattagcagatagggttcgccaagtcgagagacttaaagctgaaaa 14773929  T
Q  101 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagat 200  Q
     | ||| ||||||||||||||||||||||||||||| |||||| |||| ||||| |||||||| ||||||||||||||||| | ||||||||| ||||||    
T  14773928 ggtcagaacaaataggttccctaagaaagaaaaagtcgcttatgtcgatactggagatagtgagccagaattcgattggggatccgattctgttgaagat 14773829  T
Q  201 agcgaagtaaatctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagagcccaaaaatgata 300  Q
    | |||| ||||||| || ||||| || |||||||| ||||| |||||||| ||||||||||||||||| || ||||||||||||||  ||||||||||||    
T  14773828 aacgaaataaatcttgcagaattgaaggatgggccaccttatacttgtaacttattaaggccatcaaatggaaaaaacgtagaagaatccaaaaatgata 14773729  T
Q  301 aatatcccccaagaacttatacttttgatgtgtctaaatgtgaagaaatatttgatctattagttgctga 370  Q
    |||||||||| | || ||||||||| ||||| || |||||||||||||||||||||||  ||||||||||    
T  14773728 aatatcccccgaaaatttatactttcgatgtatccaaatgtgaagaaatatttgatcttctagttgctga 14773659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 3 - 346
Target Start/End: Complemental strand, 18565261 - 18564918
Alignment:
Q  3 gattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaaag 102  Q
    ||||||||| | |||||||| |||||||| ||||| ||||| || |||||  | || ||||| |||||||| ||||| ||||| || |||||||| ||||    
T  18565261 gattattctgttcgaaagaagttggacactcaataccttagagatatggcatagctggcagacagagtccgacaagtcgaaaggcttaaggctgaaaaag 18565162  T
Q  103 ccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagatag 202  Q
    || |||||| || |||||||||||  || |||||||| ||  | || |||||  | ||||| ||||||||||||||||| |  ||| ||||||||||||     
T  18565161 cccggacaagtaagttccctaagagggagaaagttgcctacgtagacactggaaacagtgacccagaattcgattgggggtcagatactgtcgaagataa 18565062  T
Q  203 cgaagtaaatctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagagcccaaaaatgataaa 302  Q
     ||| ||||||| || |||||||||||||| ||||  ||  | || |||||| |||||||||| || || |||||    ||||| || |||||||| |||    
T  18565061 tgaaataaatcttgcagaattaaaagatggaccgctctatgcctgcaaattactaaggccatcgaatggaaaaaatcctgaagaacctaaaaatgacaaa 18564962  T
Q  303 tatcccccaagaacttatacttttgatgtgtctaaatgtgaaga 346  Q
    ||||| || | ||| |||||||| ||||| ||||||||||||||    
T  18564961 tatcctcctaaaacatatactttcgatgtttctaaatgtgaaga 18564918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 242; Significance: 1e-134; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 358
Target Start/End: Original strand, 22637051 - 22637408
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    ||||||||| | | ||||||||||| || |||||||||||||||||||||||| || |||||||||| || | |||||||||||||||||||||||| ||    
T  22637051 tagattattttgttcgaaagaaattagatacacaatatcttagggacatggcgaaattagcagatagggttcaccaagtggaaagactcaaggctgaaaa 22637150  T
Q  101 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagat 200  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| | |||||||||||||||||  |||||||| ||||||    
T  22637151 agccagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagctagaattcgattggggttcagattctgtagaagat 22637250  T
Q  201 agcgaagtaaatctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagagcccaaaaatgata 300  Q
    | |||| ||||||| |  ||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||| |||||||||||||    
T  22637251 aacgaaataaatcttgtagaattaaaagatgggccgccttacacttgcaaattattgaggccatcaaatgggaaaaacgtagaagaacccaaaaatgata 22637350  T
Q  301 aatatcccccaagaacttatacttttgatgtgtctaaatgtgaagaaatatttgatct 358  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  22637351 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatct 22637408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 358
Target Start/End: Complemental strand, 23202087 - 23201730
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    ||||||||||| | ||||||||||| || ||||||||||||||||||||||||||| |||||||||| ||  ||||||| ||||||||||||||||| ||    
T  23202087 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagggtttgccaagtcgaaagactcaaggctgaaaa 23201988  T
Q  101 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagat 200  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||  |||||||| ||||||    
T  23201987 agccagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagccagaattcgattggggttcagattctgtagaagat 23201888  T
Q  201 agcgaagtaaatctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagagcccaaaaatgata 300  Q
    | |||| ||||||| || ||||||||||||||||||||||||||||| ||||| || ||||||||||| ||||||||||||||||| |||||||||||||    
T  23201887 aacgaaataaatcttgcagaattaaaagatgggccgccttacacttgcaaattgttgaggccatcaaatgggaaaaacgtagaagaacccaaaaatgata 23201788  T
Q  301 aatatcccccaagaacttatacttttgatgtgtctaaatgtgaagaaatatttgatct 358  Q
    ||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||    
T  23201787 aatatcccctaaaaacttatactttttatgtgtctaaatgtgaagaaatatttgatct 23201730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 358
Target Start/End: Complemental strand, 23675928 - 23675571
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    ||||||||||| | ||||||||||| || ||||||||||||||||||||||||||| |||||||||| ||  ||||||| ||||||||||||||||| ||    
T  23675928 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagggtttgccaagtcgaaagactcaaggctgaaaa 23675829  T
Q  101 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagat 200  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||  |||||||| ||||||    
T  23675828 agccagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagccagaattcgattggggttcagattctgtagaagat 23675729  T
Q  201 agcgaagtaaatctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagagcccaaaaatgata 300  Q
    | |||| ||||||| || ||||||||||||||||||||||||||||| ||||| || ||||||||||| ||||||||||||||||| |||||||||||||    
T  23675728 aacgaaataaatcttgcagaattaaaagatgggccgccttacacttgcaaattgttgaggccatcaaatgggaaaaacgtagaagaacccaaaaatgata 23675629  T
Q  301 aatatcccccaagaacttatacttttgatgtgtctaaatgtgaagaaatatttgatct 358  Q
    ||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||    
T  23675628 aatatcccctaaaaacttatactttttatgtgtctaaatgtgaagaaatatttgatct 23675571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 1 - 358
Target Start/End: Original strand, 24910629 - 24910986
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    ||||||||||| | || |||||||| || ||||||||||||||||| ||||| ||  ||||||||||||| |||||||| || ||||| |||||||| ||    
T  24910629 tagattattctgttcggaagaaattagatacacaatatcttagggatatggcacagttagcagatagagttcgccaagtcgagagacttaaggctgaaaa 24910728  T
Q  101 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagat 200  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||| ||||| |||||||| ||||||||||||||||| |  |||||||| || |||    
T  24910729 agccagaacaaataggttccctaagaaagaaaaagttgcttatgtcgatactggagatagtgagccagaattcgattggggatcagattctgttgaggat 24910828  T
Q  201 agcgaagtaaatctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagagcccaaaaatgata 300  Q
    | |||| |||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||| || |||||  |||| || || ||||||||||    
T  24910829 aacgaaataaatctcgcggaattaaaagatgggccgccttatacttgtaagttactaaggccatcaaatggaaaaaatatagaggaacctaaaaatgata 24910928  T
Q  301 aatatcccccaagaacttatacttttgatgtgtctaaatgtgaagaaatatttgatct 358  Q
    | |||| ||| | ||| || ||||| ||||| |||||||||||||| || ||||||||    
T  24910929 agtatcacccgaaaacatacactttcgatgtatctaaatgtgaagagatttttgatct 24910986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 364
Target Start/End: Original strand, 23815637 - 23816000
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    ||||||||||| | | |||||| ||||| || || || ||||| || ||||| ||  | ||||| |||||||| ||||| |||||||| |||||||| ||    
T  23815637 tagattattctgttctaaagaagttggatactcagtaccttagagatatggcacagttggcagacagagtccgacaagtcgaaagacttaaggctgaaaa 23815736  T
Q  101 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagat 200  Q
    | || ||||||| | |||||| || |  || |||||||| || || || ||  | || ||||| ||||||| |||||  || |   || |||||||||||    
T  23815737 accccggacaaacaagttccccaaaagggagaaagttgcctacatagacacaagagacagtgacccagaatacgattaagggtcatatactgtcgaagat 23815836  T
Q  201 agcgaagtaaatctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagagcccaaaaatgata 300  Q
    |  ||||| ||||| |  |||||||||||||| ||||| ||  |||| |||||| |||||||||| || || |||||    ||||| || ||||| || |    
T  23815837 aatgaagttaatcttgtagaattaaaagatggaccgccctatgcttgcaaattactaaggccatcgaatggaaaaaatcctgaagaacctaaaaacgaca 23815936  T
Q  301 aatatcccccaagaacttatacttttgatgtgtctaaatgtgaagaaatatttgatctattagt 364  Q
    ||||||| |  | ||| |||||||| ||||| |||||||||||||| || || ||||| |||||    
T  23815937 aatatcctcttaaaacatatactttcgatgtttctaaatgtgaagagatcttcgatctcttagt 23816000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 210 - 265
Target Start/End: Original strand, 17163518 - 17163573
Alignment:
Q  210 aatctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggccatc 265  Q
    ||||| || ||||||||| ||||||| |||||||| |||||||| |||||||||||    
T  17163518 aatcttgctgaattaaaacatgggcctccttacacatgtaaattgttaaggccatc 17163573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 25117619 - 25117532
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagact 88  Q
    |||| ||||| || ||||||||||| || || || ||||| || || ||||  |||||||||||||||||||| ||||| ||||||||    
T  25117619 tagactattcaattcgaaagaaattagatactcagtatctaagagatatggtacaactagcagatagagtccgacaagtcgaaagact 25117532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 19118979 - 19118898
Alignment:
Q  6 tattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagac 87  Q
    |||||||| ||||||||||| || || || ||||| || || ||||| ||| ||||||||||| |||| ||||| |||||||    
T  19118979 tattctattcgaaagaaattagatacgcagtatctaagagatatggcacaattagcagatagaatccgacaagtcgaaagac 19118898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 358
Target Start/End: Original strand, 37335 - 37692
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    ||||||||||| | ||||||||||| || |||||||||||||||||||| |||||| |||||||||| || |||||||| ||||||||||||||||| ||    
T  37335 tagattattctgttcgaaagaaattagatacacaatatcttagggacatagcgcaattagcagatagggttcgccaagtcgaaagactcaaggctgaaaa 37434  T
Q  101 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagat 200  Q
    |||||| ||||||||||||| ||||||||| ||| ||||||||||||| | |||||||||||| |||||||||||||||||||  ||||  || ||||||    
T  37435 agccagaacaaataggttccttaagaaagagaaacttgcttatatcgatattggggatagtgagccagaattcgattggggttcagatttagtagaagat 37534  T
Q  201 agcgaagtaaatctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagagcccaaaaatgata 300  Q
    | |||| ||||||| || ||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||| |||||||||||||    
T  37535 aacgaaataaatcttgcagaattaaaagatgggccgccttacacttgcaaattattgaggccatcaaatgggaaaaacgtagaagaacccaaaaatgata 37634  T
Q  301 aatatcccccaagaacttatacttttgatgtgtctaaatgtgaagaaatatttgatct 358  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  37635 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatct 37692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 234; Significance: 1e-129; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 358
Target Start/End: Original strand, 21509723 - 21510080
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    ||||||||||| | ||||||||||| || ||| ||||||||||||||||||| ||| |||||||||| || |||||||| || ||||| |||||||| ||    
T  21509723 tagattattctgttcgaaagaaattagatacataatatcttagggacatggcacaattagcagatagggttcgccaagtcgagagacttaaggctgaaaa 21509822  T
Q  101 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagat 200  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||| || |||||||||||||||||||  |||||||| ||||||    
T  21509823 agccagaacaaataggttccctaagaaagaaaaagttgcttatatcgatactggagatagcgagccagaattcgattggggttcagattctgttgaagat 21509922  T
Q  201 agcgaagtaaatctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagagcccaaaaatgata 300  Q
    | |||  ||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  21509923 aacgagataaatcttgcagaattaaaagatgggccgctttacacttgtaaattattaaggccatcaaatgggaaaaacgtagaagagcccaaaaatgata 21510022  T
Q  301 aatatcccccaagaacttatacttttgatgtgtctaaatgtgaagaaatatttgatct 358  Q
    |||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||    
T  21510023 aatatcccccaaaaacttatacctttgatgtatctaaatgtgaagaaatatttgatct 21510080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 1 - 356
Target Start/End: Complemental strand, 26272305 - 26271951
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    ||||||||||| | ||||||||||| || ||||||||||||||||||||||||||| |||||||||| ||  ||||||| || ||||| |||||||| ||    
T  26272305 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagggtttgccaagtcgagagacttaaggctgaaaa 26272206  T
Q  101 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagat 200  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||| || |||||||||||||||||||  |||||| | || |||    
T  26272205 agccagaacaaataggttccctaagaaagaaaaagttgcttatatcgatactggagatagcgagccagaattcgattggggttcagattctattgaggat 26272106  T
Q  201 agcgaagtaaatctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagagcccaaaaatgata 300  Q
    | |||  ||||||| || ||| ||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||| ||||    
T  26272105 aacgagataaatcttgcagaactaaaagatgggccgccttacacttgtaaattgttgaggccatcaaatgggaaaaacgtagaagagcccaaaaa-gata 26272007  T
Q  301 aatatcccccaagaacttatacttttgatgtgtctaaatgtgaagaaatatttgat 356  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  26272006 aatatcccccaaaaacttatacttttgatgtatctaaatgtgaagaaatatttgat 26271951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 22853706 - 22853604
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    |||| |||||||| | ||||||||| || || || ||||| || || ||| | ||||||||||||||| |||| ||||| |||||||| || ||||| ||    
T  22853706 tagactattctattcaaaagaaattagatactcagtatctaagagatatgacacaactagcagatagactccgacaagttgaaagacttaaagctgaaaa 22853607  T
Q  101 agc 103  Q
    |||    
T  22853606 agc 22853604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 358
Target Start/End: Original strand, 16129 - 16486
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    ||||||||||| | ||||||||||| || ||||||||||||||||||||||||||| |||||||||| ||  ||||||| ||||||||||||||||| ||    
T  16129 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagggtttgccaagtcgaaagactcaaggctgaaaa 16228  T
Q  101 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagat 200  Q
    |||||| ||||||||||||||||| ||||| ||||||||||||||||| ||||| ||| |||| |||||||||| ||||||||  |||||||| || |||    
T  16229 agccagaacaaataggttccctaataaagagaaagttgcttatatcgatactggtgattgtgagccagaattcgtttggggttcagattctgtagatgat 16328  T
Q  201 agcgaagtaaatctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagagcccaaaaatgata 300  Q
    | |||  ||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||| ||||||    
T  16329 aacgatataaatcttgcagaattaaaagatgggccgccttacacttgtaaattattgaggccatcaaatgggaaaaacgtagaagaacccaaacatgata 16428  T
Q  301 aatatcccccaagaacttatacttttgatgtgtctaaatgtgaagaaatatttgatct 358  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  16429 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatct 16486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 230; Significance: 1e-127; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 358
Target Start/End: Original strand, 23433831 - 23434187
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    ||||||||||| | ||||||||||| || ||||||||||||||||||||||||||| ||| |||||| || |||||||| ||||||||||||||||| ||    
T  23433831 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagtagatagggttcgccaagtcgaaagactcaaggctgaaaa 23433930  T
Q  101 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagat 200  Q
    |||||| || |||||||||||||||||||| |||||||||||||| || |||||| ||||||| |||||||||||||||||||  |||| ||| ||||||    
T  23433931 agccagaacgaataggttccctaagaaagagaaagttgcttatattgatactggg-atagtgagccagaattcgattggggttcagattatgtagaagat 23434029  T
Q  201 agcgaagtaaatctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagagcccaaaaatgata 300  Q
    | |||| ||||||| || |||||||||||||||||||||| |||||| |||||||| ||||||||||| ||||||||||||||||| |||||||||||||    
T  23434030 aacgaaataaatcttgcagaattaaaagatgggccgcctttcacttgcaaattattgaggccatcaaatgggaaaaacgtagaagaacccaaaaatgata 23434129  T
Q  301 aatatcccccaagaacttatacttttgatgtgtctaaatgtgaagaaatatttgatct 358  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  23434130 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatct 23434187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 19036637 - 19036269
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    ||||||||||||| ||||||||||| || |||||||||| |||||||||||||||| ||||||||||||| |||||||| || ||||| |||||||| ||    
T  19036637 tagattattctattcgaaagaaattagatacacaatatcatagggacatggcgcaattagcagatagagttcgccaagtcgagagacttaaggctgaaaa 19036538  T
Q  101 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagat 200  Q
    |||||| |||||||| |||||||||||||| ||| |||||||||| || ||||| |||||||| ||||||||||||||||| |  |||||||| ||||||    
T  19036537 agccagaacaaatagattccctaagaaagagaaatttgcttatatagatactggagatagtgagccagaattcgattggggatcagattctgtagaagat 19036438  T
Q  201 agcgaagtaaatctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagagcccaaaaatgata 300  Q
    | |||| ||||||| || ||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||| |||||||| |||||||||||||    
T  19036437 aacgaaataaatcttgcagaattaaaagatgggccgccttacacttgtaaattgttaaggcc-tcaaatgggaaaaatgtagaagaacccaaaaatgata 19036339  T
Q  301 aatatcccccaagaacttatacttttgatgtgtctaaatgtgaagaaatatttgatctattagttgctga 370  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||  ||||||||||    
T  19036338 aatatcccccaaaaacttatacttttaatgtgtctaaatgtgaagaaatatttgatcttctagttgctga 19036269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 1 - 358
Target Start/End: Complemental strand, 1552626 - 1552270
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    ||||||||||||| ||||||||| | || ||||||||||||||||| ||||| ||| ||||||||||||||||||| || || ||||| |||||||| ||    
T  1552626 tagattattctattcgaaagaaactagatacacaatatcttagggatatggcacaattagcagatagagtccgcca-gttgagagacttaaggctgaaaa 1552528  T
Q  101 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagat 200  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||| ||||||||||||||||| |  |||||||| || |||    
T  1552527 agccagaacaaataggttccctaagaaagaaaaaattgcttatatcgatactggagatagtgagccagaattcgattggggatcagattctgttgaggat 1552428  T
Q  201 agcgaagtaaatctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagagcccaaaaatgata 300  Q
    | ||||||||||||||| |||||||||||||| |||||||| |||||||| ||| |||||||||  || || |||||  ||||||| || ||||||||||    
T  1552427 aacgaagtaaatctcgcagaattaaaagatggaccgccttatacttgtaagttactaaggccattgaatggaaaaaatatagaagaacctaaaaatgata 1552328  T
Q  301 aatatcccccaagaacttatacttttgatgtgtctaaatgtgaagaaatatttgatct 358  Q
    | |||||||||| ||| |||| ||||||||| |||||||||||||| || ||||||||    
T  1552327 agtatcccccaaaaacatatagttttgatgtatctaaatgtgaagagatttttgatct 1552270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 16211719 - 16211959
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    ||||||||||| | ||||||||||| || ||||| ||||||||||| ||||||||| |||||||||| || |||||||| || ||||  || ||||| ||    
T  16211719 tagattattctgttcgaaagaaattagatacacagtatcttagggatatggcgcaattagcagatagggttcgccaagtcgagagacataaagctgaaaa 16211818  T
Q  101 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagat 200  Q
     ||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||| |  |||||||| |||||     
T  16211819 ggccagaacaaataggttccctaagaaagaaaaagttgcttatatcgatactggagatagtgagccagaattcgattggggatcagattctgttgaagaa 16211918  T
Q  201 agcgaagtaaatctcgcggaattaaaagatgggccgcctta 241  Q
    | |||| |||||||||| |||||||| |||||||| |||||    
T  16211919 aacgaaataaatctcgcagaattaaaggatgggccacctta 16211959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 15 - 181
Target Start/End: Complemental strand, 19270598 - 19270432
Alignment:
Q  15 cgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaaagccaggacaaata 114  Q
    ||||||||  |||| || ||||| |||||||| ||||| ||| ||||||||| ||| || ||||| ||||| || ||||||||||||||| | |||||||    
T  19270598 cgaaagaatatggatactcaataccttagggatatggcacaattagcagatatagttcgacaagtcgaaaggcttaaggctgagaaagcccgaacaaata 19270499  T
Q  115 ggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattgggg 181  Q
    ||||||| || |  || |||||||| ||| | || || || || ||||| |||||||||||||||||    
T  19270498 ggttcccaaaaagggagaaagttgcctatgtagacacaggagacagtgacccagaattcgattgggg 19270432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 17801947 - 17801880
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagataga 68  Q
    |||| |||||||| ||||||||||| || || || ||||| ||||| ||||||||| |||||||||||    
T  17801947 tagactattctattcgaaagaaattagatacgcagtatctaagggatatggcgcaattagcagataga 17801880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 358
Target Start/End: Original strand, 4307 - 4664
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    ||||||||||||| ||||||||||| || ||||||||||||||||||||||||||| ||||||| || || |||||||| || ||||| |||||||| ||    
T  4307 tagattattctattcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagacagggttcgccaagtcgagagacttaaggctgaaaa 4406  T
Q  101 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagat 200  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||| ||||||||||||||||| |  |||||||| ||||||    
T  4407 agccagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggagatagtgagccagaattcgattggggatcagattctgtggaagat 4506  T
Q  201 agcgaagtaaatctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagagcccaaaaatgata 300  Q
    | |||| ||||||| || |||||||||||||||||||||||||| |||||||| |||||||||||||| || ||||||||||||||  ||||||||| ||    
T  4507 aacgaaataaatcttgcagaattaaaagatgggccgccttacacctgtaaattgttaaggccatcaaatggaaaaaacgtagaagaatccaaaaatgtta 4606  T
Q  301 aatatcccccaagaacttatacttttgatgtgtctaaatgtgaagaaatatttgatct 358  Q
    |||||||||||| |||||||||||||||||| ||||| |||||||| |||||||||||    
T  4607 aatatcccccaaaaacttatacttttgatgtatctaagtgtgaagagatatttgatct 4664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 128183 - 127815
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    ||||||||||| | ||||||||||| || |||||||||||||||||||||| |||| |||||||||| || |||||||| || ||||| |||||||| ||    
T  128183 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggtgcaattagcagatagggttcgccaagtcgagagacttaaggctgaaaa 128084  T
Q  101 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagat 200  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||| |  |||| ||| ||||||    
T  128083 agccagaacaaataggttccctaacaaagaaaaagttgcttatatcgatactggagatagtgagccagaattcgattggggatcagattttgttgaagat 127984  T
Q  201 agcgaagtaaatctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagagcccaaaaatgata 300  Q
    |  ||  ||||||| || |||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||| |||||||||||     
T  127983 aatgagataaatcttgcagaattaaaagatgggccgccttacacttgtaagtcattaaggccatcaaatgggaaaaacgtagaagagtccaaaaatgat- 127885  T
Q  301 aatatcccccaagaacttatacttttgatgtgtctaaatgtgaagaaatatttgatctattagttgctga 370  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||    
T  127884 aatatcccccaaaaacttatacttttgatgtatctaaatgtgaagaaatatttgatcttctagttgctga 127815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 370
Target Start/End: Original strand, 28414 - 28773
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    ||||||||||| | ||||||||||| || ||||||||||||||||||||||||||| |||   |||       ||||||  ||| ||| |||||||| ||    
T  28414 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattag---ata-------ccaagtcaaaaaacttaaggctgaaaa 28503  T
Q  101 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagat 200  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||| |||||||||||||||||||  |||||||| ||||||    
T  28504 agccagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggagatagtgagccagaattcgattggggttcagattctgtagaagat 28603  T
Q  201 agcgaagtaaatctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagagcccaaaaatgata 300  Q
    | |||| ||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||    
T  28604 aacgaaataaatcttgcagaattaaaagatgggccgccttacacttgtaaattattgaggccatcaaatgggaaaaacgtagaagaacccaaaaatgata 28703  T
Q  301 aatatcccccaagaacttatacttttgatgtgtctaaatgtgaagaaatatttgatctattagttgctga 370  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||    
T  28704 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagagatatttgatcttctagttgctga 28773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 358
Target Start/End: Original strand, 24941 - 25298
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    ||||||||||| | ||||||||||| ||||| |||||||||||||||||||||||| |||||||||  || |||||||| |||||||| |||||||| ||    
T  24941 tagattattctgttcgaaagaaattagacacccaatatcttagggacatggcgcaattagcagataaggttcgccaagtcgaaagacttaaggctgaaaa 25040  T
Q  101 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagat 200  Q
     ||||| ||||||||||||| ||||||||| ||||| ||||||||||| ||| | |||||||| ||||||||||||||||| |  |||||||| ||||||    
T  25041 ggccagaacaaataggttccttaagaaagagaaagtcgcttatatcgatactagagatagtgagccagaattcgattggggatcagattctgtagaagat 25140  T
Q  201 agcgaagtaaatctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagagcccaaaaatgata 300  Q
    | |||| ||||||| |||||||| ||||||||||| ||||||||||||||| |||| |||||||| ||||||||||||||||| || |||||||| ||||    
T  25141 aacgaaataaatcttgcggaattgaaagatgggccaccttacacttgtaaagtattgaggccatcgaacgggaaaaacgtagaggaacccaaaaacgata 25240  T
Q  301 aatatcccccaagaacttatacttttgatgtgtctaaatgtgaagaaatatttgatct 358  Q
    |||||||||||| |||||| |||||||| ||||||||||| |||||||||||||||||    
T  25241 aatatcccccaaaaacttaaacttttgaagtgtctaaatgcgaagaaatatttgatct 25298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 198; Significance: 1e-108; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 358
Target Start/End: Original strand, 64065 - 64422
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    ||||||||||| | ||||||||||| || ||||||||||||||||| ||||||||  |||||||||| || |||||||| || ||||| |||||||| ||    
T  64065 tagattattctgttcgaaagaaattagatacacaatatcttagggatatggcgcagttagcagatagggttcgccaagtcgagagacttaaggctgaaaa 64164  T
Q  101 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagat 200  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||| |  || ||||   |||||    
T  64165 agccagaacaaataggttcccttagaaagaaaaagttgcttatatcgatactggagatagtgagccagaattcgattggggatcagactctgcttaagat 64264  T
Q  201 agcgaagtaaatctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagagcccaaaaatgata 300  Q
    | |||  ||||||| || |||||||||||||||||| |||| |||||||| ||||||||||||||||  || |||||||||||||||  |||||||||||    
T  64265 aacgagataaatcttgcagaattaaaagatgggccggcttatacttgtaagttattaaggccatcaagtggaaaaaacgtagaagagttcaaaaatgata 64364  T
Q  301 aatatcccccaagaacttatacttttgatgtgtctaaatgtgaagaaatatttgatct 358  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  64365 aatatcccccaaaaacttatacttttgatgtatctaaatgtgaagaaatatttgatct 64422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 358
Target Start/End: Original strand, 73243 - 73600
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    ||||||||||| | ||||||||||| || ||||||||||||||||| ||||||||  |||||||||| || |||||||| || ||||| |||||||| ||    
T  73243 tagattattctgttcgaaagaaattagatacacaatatcttagggatatggcgcagttagcagatagggttcgccaagtcgagagacttaaggctgaaaa 73342  T
Q  101 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagat 200  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||| |  || ||||   |||||    
T  73343 agccagaacaaataggttcccttagaaagaaaaagttgcttatatcgatactggagatagtgagccagaattcgattggggatcagactctgcttaagat 73442  T
Q  201 agcgaagtaaatctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagagcccaaaaatgata 300  Q
    | |||  ||||||| || |||||||||||||||||| |||| |||||||| ||||||||||||||||  || |||||||||||||||  |||||||||||    
T  73443 aacgagataaatcttgcagaattaaaagatgggccggcttatacttgtaagttattaaggccatcaagtggaaaaaacgtagaagagttcaaaaatgata 73542  T
Q  301 aatatcccccaagaacttatacttttgatgtgtctaaatgtgaagaaatatttgatct 358  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  73543 aatatcccccaaaaacttatacttttgatgtatctaaatgtgaagaaatatttgatct 73600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 4876 - 4723
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    ||||||||||| | || ||||| || || |||||||| |||||||| ||||| ||| ||| |||||||||||||||||| || ||||| |||||| | ||    
T  4876 tagattattctgttcggaagaagttagatacacaataccttagggatatggcacaattagtagatagagtccgccaagttgagagacttaaggctaaaaa 4777  T
Q  101 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactgg 154  Q
    ||| || |||||| |||||||||||||||||||||||||||||||||| |||||    
T  4776 agctagaacaaattggttccctaagaaagaaaaagttgcttatatcgacactgg 4723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 370
Target Start/End: Original strand, 65702 - 66071
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    ||||||||||||| ||||||||||| || ||||||||||||||||| ||||||||| |||||||||| || |||||||| || ||||| || ||||| ||    
T  65702 tagattattctattcgaaagaaattagatacacaatatcttagggatatggcgcaattagcagatagggttcgccaagtcgagagacttaaagctgaaaa 65801  T
Q  101 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagat 200  Q
     | ||| ||||||||||||||||||||||||||||| |||||| |||| ||||| |||||||| ||||||||||||||||| | ||||||||| ||||||    
T  65802 ggtcagaacaaataggttccctaagaaagaaaaagtcgcttatgtcgatactggagatagtgagccagaattcgattggggatccgattctgttgaagat 65901  T
Q  201 agcgaagtaaatctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagagcccaaaaatgata 300  Q
    | |||| ||||||| || ||||| || |||||||| ||||| |||||||| ||||||||||||||||| || ||||||||||||||  | ||||||||||    
T  65902 aacgaaataaatcttgcagaattgaatgatgggccaccttatacttgtaatttattaaggccatcaaatggaaaaaacgtagaagaatctaaaaatgata 66001  T
Q  301 aatatcccccaagaacttatacttttgatgtgtctaaatgtgaagaaatatttgatctattagttgctga 370  Q
    |||||||||| | || ||||||||| ||||| || |||||||||||||||||||||||  ||||||||||    
T  66002 aatatcccccgaaaatttatactttcgatgtatccaaatgtgaagaaatatttgatcttctagttgctga 66071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 182; Significance: 3e-98; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 1 - 358
Target Start/End: Complemental strand, 39053 - 38697
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    ||||||||||| | |||||||| || ||||| |||||||||||||||||||||||| |||||||||| || |||||||| |||||||| |||||||| ||    
T  39053 tagattattctgttcgaaagaa-ttagacacccaatatcttagggacatggcgcaattagcagatagggttcgccaagtcgaaagacttaaggctgaaaa 38955  T
Q  101 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagat 200  Q
     | ||| ||||||||||||||||||||||| ||||| ||||||||||| ||||| |||||||| ||||||||||||||||| |  |||| ||| |||||     
T  38954 ggacagaacaaataggttccctaagaaagagaaagtcgcttatatcgatactggagatagtgagccagaattcgattggggatcagattatgtagaagac 38855  T
Q  201 agcgaagtaaatctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagagcccaaaaatgata 300  Q
    | |||| ||||||| |||||| | ||||||||||| ||||||||||||||| |||| |||||||| ||  ||||||||||||| || |||||||| ||||    
T  38854 aacgaaataaatcttgcggaactgaaagatgggccaccttacacttgtaaagtattgaggccatcgaattggaaaaacgtagaggaacccaaaaacgata 38755  T
Q  301 aatatcccccaagaacttatacttttgatgtgtctaaatgtgaagaaatatttgatct 358  Q
    |||||||||||| |||||| |||||||| ||||||||||| |||||||||||||||||    
T  38754 aatatcccccaaaaacttacacttttgacgtgtctaaatgcgaagaaatatttgatct 38697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 182; Significance: 3e-98; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 1 - 358
Target Start/End: Complemental strand, 140423 - 140066
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    ||||||||||| |  |||||||||| || |||||||| |||||||| ||||||||| |||||||||| || |||||||| || ||||| ||| |||| ||    
T  140423 tagattattctgtttgaaagaaattagatacacaataccttagggatatggcgcaattagcagatagggttcgccaagtcgagagacttaagtctgaaaa 140324  T
Q  101 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagat 200  Q
     ||||| ||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||| ||||||||||||||||| |  |||||||| ||||||    
T  140323 ggccagaacaaataggttccctaagaaagaaaaaattgcttatatcgatactggagatagtgagccagaattcgattggggatcagattctgttgaagat 140224  T
Q  201 agcgaagtaaatctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagagcccaaaaatgata 300  Q
    | |||| ||||||| || |||||||| |||||||||||||| ||||||||  || ||||||||||||| |||||||||||||||||  ||||||||||||    
T  140223 aacgaaataaatcttgcagaattaaaggatgggccgccttatacttgtaagctactaaggccatcaaatgggaaaaacgtagaagaatccaaaaatgata 140124  T
Q  301 aatatcccccaagaacttatacttttgatgtgtctaaatgtgaagaaatatttgatct 358  Q
    |||||||||| | ||| || ||||| ||||| ||||||||||||||||| ||||||||    
T  140123 aatatcccccgaaaacgtacactttcgatgtatctaaatgtgaagaaatttttgatct 140066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0656 (Bit Score: 174; Significance: 2e-93; HSPs: 1)
Name: scaffold0656
Description:

Target: scaffold0656; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 1 - 358
Target Start/End: Original strand, 3775 - 4132
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    ||||||||||| | | ||||||| | || ||||||||||||||||| ||||| ||  ||||||||||||| |||||||| || ||||| |||||||| ||    
T  3775 tagattattctgttccaaagaaactagatacacaatatcttagggatatggcacagttagcagatagagttcgccaagttgagagacttaaggctgaaaa 3874  T
Q  101 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagat 200  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||| | |||||||| ||||||||||||||| | |  |||||||| || |||    
T  3875 agccagaacaaataggttccctaagaaagaaaaagttgcttatatcgatactagagatagtgagccagaattcgattggtgatcagattctgttgatgat 3974  T
Q  201 agcgaagtaaatctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagagcccaaaaatgata 300  Q
    | |||| |||||||||| |||||||||||||| |||||||| |||||||| ||| |||||||||| || ||||||||  ||||||| || ||||||||||    
T  3975 aacgaaataaatctcgcagaattaaaagatggaccgccttatacttgtaagttactaaggccatcgaatgggaaaaatttagaagaacctaaaaatgata 4074  T
Q  301 aatatcccccaagaacttatacttttgatgtgtctaaatgtgaagaaatatttgatct 358  Q
    | |||||||| | ||| |||||||||||||| |||||||||||||| || ||||||||    
T  4075 agtatcccccgaaaacatatacttttgatgtatctaaatgtgaagagatttttgatct 4132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 166; Significance: 9e-89; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 6999 - 6630
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    ||||||||||| | ||||||||||| || ||||| ||||||||||| ||||||||| ||| ||||||  | |||||||| || ||||| || ||||| ||    
T  6999 tagattattctgttcgaaagaaattagatacacagtatcttagggatatggcgcaattagtagataggattcgccaagtcgagagacttaaagctgaaaa 6900  T
Q  101 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagat 200  Q
     ||||| ||||||||||||||||||||||||||||| |||||| |||| | ||| |||||||| ||||||||| ||||||| | | ||||||| ||||||    
T  6899 ggccagaacaaataggttccctaagaaagaaaaagtcgcttatgtcgacattggagatagtgagccagaattcaattggggatccaattctgttgaagat 6800  T
Q  201 agcgaagtaaatctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagagcccaaaaatgata 300  Q
    | |||| ||||||| || ||||| ||||||||||| ||||| |||||||| |||||||||| |||||| || ||||||||||||||  | |||| |||||    
T  6799 aacgaaataaatcttgcagaattgaaagatgggccaccttatacttgtaagttattaaggctatcaaatggaaaaaacgtagaagaatctaaaattgata 6700  T
Q  301 aatatcccccaagaacttatacttttgatgtgtctaaatgtgaagaaatatttgatctattagttgctga 370  Q
    |||||||||| | |||||||||||| ||||| || |||||||||||||||||||||||  ||||||||||    
T  6699 aatatcccccgaaaacttatactttcgatgtatccaaatgtgaagaaatatttgatcttctagttgctga 6630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 162; Significance: 2e-86; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 358
Target Start/End: Complemental strand, 160527 - 160170
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    ||||||||||| | |||||||| || || ||||||||||||||||| ||| | ||| ||||| ||||||||| |||||| || ||||| || || || ||    
T  160527 tagattattctgttcgaaagaagttagatacacaatatcttagggatatgacacaattagcatatagagtccaccaagtcgagagacttaaagcagaaaa 160428  T
Q  101 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagat 200  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||| ||||||||| ||||||| |  |||||||| || |||    
T  160427 agccagaacaaataggtttcctaagaaagaaaaagttgcttatatcgatactggagatagtgagccagaattcaattggggatcagattctgttgatgat 160328  T
Q  201 agcgaagtaaatctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagagcccaaaaatgata 300  Q
    | |||| |||||||||| ||||||||||||||||||||||| |||||||| ||| |||||||||| || ||||||||  || |||| || ||||||||||    
T  160327 aacgaaataaatctcgcagaattaaaagatgggccgccttatacttgtaagttactaaggccatcgaatgggaaaaatataaaagaacctaaaaatgata 160228  T
Q  301 aatatcccccaagaacttatacttttgatgtgtctaaatgtgaagaaatatttgatct 358  Q
    |||||||||| | ||| || ||||||| ||| |||||||||||||| || ||||||||    
T  160227 aatatcccccgaaaacatacacttttgctgtatctaaatgtgaagagatttttgatct 160170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 153; Significance: 5e-81; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 30 - 358
Target Start/End: Original strand, 3865 - 4193
Alignment:
Q  30 acacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaaagccaggacaaataggttccctaagaaag 129  Q
    ||||||||||||||||| ||||| ||| |||||||||||||||||||||| |||||||| |||||| | |||||||  |||||||||||||||||||||     
T  3865 acacaatatcttagggatatggcacaattagcagatagagtccgccaagttgaaagacttaaggctaaaaaagccaaaacaaataggttccctaagaaac 3964  T
Q  130 aaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagatagcgaagtaaatctcgcggaattaaaaga 229  Q
    ||||||||||||||||||| ||| | |||||||| ||||||||||||||||| |  |||| ||| || |||| |||| |||||||||| |||||||||||    
T  3965 aaaaagttgcttatatcgatactagagatagtgagccagaattcgattggggatctgattatgttgatgataacgaaataaatctcgcagaattaaaaga 4064  T
Q  230 tgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagagcccaaaaatgataaatatcccccaagaacttatacttttgat 329  Q
    ||| |||||||| |||||||| ||| || |||||||||| || |||||  ||||||| || || ||||||| ||||||||| | ||| || |||||||||    
T  4065 tggaccgccttatacttgtaagttactacggccatcaaatggaaaaaatatagaagaacctaagaatgatacatatcccccgaaaacatacacttttgat 4164  T
Q  330 gtgtctaaatgtgaagaaatatttgatct 358  Q
    || |||||||| ||||| || ||||||||    
T  4165 gtatctaaatgcgaagagatttttgatct 4193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 142; Significance: 2e-74; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 31 - 308
Target Start/End: Original strand, 32515 - 32791
Alignment:
Q  31 cacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaaagccaggacaaataggttccctaagaaaga 130  Q
    |||||||||||||||| ||||| ||| |||||||||| |||| |||||| |||||||| |||||||| || ||||| |||||||||||||||||||||||    
T  32515 cacaatatcttagggatatggcacaattagcagatag-gtcctccaagttgaaagacttaaggctgaaaaggccagaacaaataggttccctaagaaaga 32613  T
Q  131 aaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagatagcgaagtaaatctcgcggaattaaaagat 230  Q
    |||||||||||||||||| ||||| |||||||| ||||||||||||| ||| |  |||||||| || |||| |||| |||||||||  ||||||||||||    
T  32614 aaaagttgcttatatcgatactggagatagtgagccagaattcgattagggatctgattctgttgatgataacgaaataaatctcgtagaattaaaagat 32713  T
Q  231 gggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagagcccaaaaatgataaatatccc 308  Q
    ||||||||||| |||||||| ||| ||||||||||||| || |||||  ||||||| || || |||||||||||||||    
T  32714 gggccgccttatacttgtaagttactaaggccatcaaatggaaaaaatatagaagaacctaagaatgataaatatccc 32791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740 (Bit Score: 134; Significance: 1e-69; HSPs: 1)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 280 - 461
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    ||||||||||| | ||||||||||| || ||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||    
T  280 tagattattctgttcgaaagaaattagatacaaaatatcttagggacatggcgcaattagcagatagagttcgccaagtggaaagactcaaggctgaaaa 379  T
Q  101 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggt 182  Q
    |||||| ||| |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  380 agccagaacagataggttccccaagaaagaaaaagttgcttatatcgatactggggatagtgaaccagaattcgattggggt 461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 134; Significance: 1e-69; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 30 - 299
Target Start/End: Original strand, 13232 - 13501
Alignment:
Q  30 acacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaaagccaggacaaataggttccctaagaaag 129  Q
    |||||| |||||||||| ||||| ||| | |||||||||||||||||||| ||||| || |||||||| |||||||||||||||||||||||||||||||    
T  13232 acacaacatcttagggatatggcacaattggcagatagagtccgccaagttgaaaggcttaaggctgaaaaagccaggacaaataggttccctaagaaag 13331  T
Q  130 aaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagatagcgaagtaaatctcgcggaattaaaaga 229  Q
    |||| ||||||||||||||  |||| |||||||| |||||||| |||||||| | |||  | || || |||| | || |||||||||| ||||| |||||    
T  13332 aaaaggttgcttatatcgacgctggagatagtgatccagaatttgattggggatccgaggcggttgatgataacaaaataaatctcgccgaattgaaaga 13431  T
Q  230 tgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagagcccaaaaatgat 299  Q
    |||||||||||| |||||||| ||| ||||||||||||| || ||||| |||||||| ||||||||||||    
T  13432 tgggccgccttatacttgtaagttactaaggccatcaaatggaaaaaatgtagaagaacccaaaaatgat 13501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 130; Significance: 3e-67; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 1 - 358
Target Start/End: Complemental strand, 180764 - 180407
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    ||||||||||| |||||||||| |||||||| |||||||||||||| ||||| ||| | ||| |||||||||| ||||| ||||| || || ||||| ||    
T  180764 tagattattctgtccgaaagaagttggacactcaatatcttagggatatggcacaattggcaaatagagtccgacaagttgaaaggcttaaagctgaaaa 180665  T
Q  101 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagat 200  Q
     |||||||||||||| ||||||||||| || |||||||||||  | || ||||| || |||||  || ||||||||||||||| |||| |||||||||||    
T  180664 ggccaggacaaatagattccctaagaaggagaaagttgcttacgtagatactggtgacagtgacgcataattcgattggggttccgatactgtcgaagat 180565  T
Q  201 agcgaagtaaatctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagagcccaaaaatgata 300  Q
    | |||  |||||||||| ||||||||||||||||| || || || || || ||||||||||||||||| || ||||||  |||||| || || ||||| |    
T  180564 aacgagataaatctcgcagaattaaaagatgggccaccatatacctgcaagttattaaggccatcaaatggaaaaaacccagaagaaccaaagaatgaca 180465  T
Q  301 aatatcccccaagaacttatacttttgatgtgtctaaatgtgaagaaatatttgatct 358  Q
    ||||||| || | ||| || ||||| ||||| |||||||| ||||| || ||||||||    
T  180464 aatatcctcctaaaacatacactttcgatgtttctaaatgcgaagagatctttgatct 180407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 120; Significance: 3e-61; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 1 - 364
Target Start/End: Complemental strand, 69128 - 68765
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    ||||||||||| | |||||||| |||||||| |||||||||||||| ||||| ||| | ||||| |||||||| ||||| ||||| || | |||||||||    
T  69128 tagattattctgttcgaaagaagttggacactcaatatcttagggatatggcacaagtggcagacagagtccgacaagtcgaaaggcttatggctgagaa 69029  T
Q  101 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagat 200  Q
    |||| |||||||||| ||||||||||| ||||||||||| ||  | || || || || | ||| ||| ||||||||||||| |  ||| |||||||||||    
T  69028 agcccggacaaatagattccctaagaaggaaaaagttgcctacgtggataccggagacaatgacccataattcgattgggggtcagatactgtcgaagat 68929  T
Q  201 agcgaagtaaatctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagagcccaaaaatgata 300  Q
    |  ||| |||||||||| || |||||||||||||| ||||| |  || |||||||||||||||||||| || ||||||   ||||| || |||||||| |    
T  68928 aatgaaataaatctcgcagagttaaaagatgggccaccttataactgcaaattattaaggccatcaaatggaaaaaaccctgaagaacctaaaaatgaca 68829  T
Q  301 aatatcccccaagaacttatacttttgatgtgtctaaatgtgaagaaatatttgatctattagt 364  Q
    ||||| | || | ||| |||||||| ||||| |||||||||||||| || || ||||| |||||    
T  68828 aatattctcctaaaacatatactttcgatgtttctaaatgtgaagagatcttcgatcttttagt 68765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 114; Significance: 1e-57; HSPs: 6)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 1 - 358
Target Start/End: Original strand, 146525 - 146882
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    ||||||||||  |||||||||| ||||| || ||||| |||||||| |||||  || | |||||||||||||| ||||| ||||| || |||||||| ||    
T  146525 tagattattcggtccgaaagaagttggatacccaataccttagggatatggcataattggcagatagagtccgacaagttgaaaggcttaaggctgaaaa 146624  T
Q  101 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagat 200  Q
     |||||||||||||| |||||||||||||| ||||||||||| || || ||||| || | ||| ||| |||| |||||||||| |||| || ||||||||    
T  146625 ggccaggacaaatagattccctaagaaagagaaagttgcttacattgatactggagacaatgacccataatttgattggggttccgatactctcgaagat 146724  T
Q  201 agcgaagtaaatctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagagcccaaaaatgata 300  Q
    | |||  |||||||||| ||||||||||||||||| || || || ||| | ||| ||||||||||||| || || |||   ||||| || || ||||| |    
T  146725 aacgagataaatctcgcagaattaaaagatgggccaccatatacctgttagttactaaggccatcaaatggaaagaaccctgaagaaccaaagaatgaca 146824  T
Q  301 aatatcccccaagaacttatacttttgatgtgtctaaatgtgaagaaatatttgatct 358  Q
    ||||||| || | ||| || ||||||||||| |||||||| ||||| || ||||||||    
T  146825 aatatcctcctaaaacatacacttttgatgtttctaaatgcgaagagatctttgatct 146882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 346
Target Start/End: Original strand, 82514 - 82859
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    ||||||||||  || ||||||| ||||| || ||||| |||||||| ||||| ||| | |||| ||||||||| ||||| ||||| || |||||||| ||    
T  82514 tagattattcggtctgaaagaagttggatacccaataccttagggatatggcacaattggcagttagagtccgacaagttgaaaggcttaaggctgaaaa 82613  T
Q  101 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagat 200  Q
     |||||||||||||| ||||||| |||||| ||||||||||| || || ||||| || | ||| |||||||| ||||||||||||||| || || |||||    
T  82614 ggccaggacaaatagattccctaggaaagagaaagttgcttacattgatactggagacaatgacccagaatttgattggggtttcgatactctcaaagat 82713  T
Q  201 agcgaagtaaatctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagagcccaaaaatgata 300  Q
    | |||  |||||||||| ||||||||||||||||| || || || ||||| ||| ||||||||||||| || || |||   ||||| || || ||||| |    
T  82714 aacgagataaatctcgcagaattaaaagatgggccaccatatacctgtaagttactaaggccatcaaatggaaagaaccctgaagaaccaaagaatgaca 82813  T
Q  301 aatatcccccaagaacttatacttttgatgtgtctaaatgtgaaga 346  Q
    ||||||| || | ||| || || || ||||| |||||||| |||||    
T  82814 aatatcctcctaaaacatacaccttagatgtttctaaatgcgaaga 82859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 346
Target Start/End: Original strand, 120186 - 120531
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    ||||||||||  || ||||||| ||||| || ||||| |||||||| ||||| ||| | |||| ||||||||| ||||| ||||| || |||||||| ||    
T  120186 tagattattcggtctgaaagaagttggatacccaataccttagggatatggcacaattggcagttagagtccgacaagttgaaaggcttaaggctgaaaa 120285  T
Q  101 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagat 200  Q
     |||||||||||||| ||||||| |||||| ||||||||||| || || ||||| || | ||| |||||||| ||||||||||||||| || || |||||    
T  120286 ggccaggacaaatagattccctaggaaagagaaagttgcttacattgatactggagacaatgacccagaatttgattggggtttcgatactctcaaagat 120385  T
Q  201 agcgaagtaaatctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagagcccaaaaatgata 300  Q
    | |||  |||||||||| ||||||||||||||||| || || || ||||| ||| ||||||||||||| || || |||   ||||| || || ||||| |    
T  120386 aacgagataaatctcgcagaattaaaagatgggccaccatatacctgtaagttactaaggccatcaaatggaaagaaccctgaagaaccaaagaatgaca 120485  T
Q  301 aatatcccccaagaacttatacttttgatgtgtctaaatgtgaaga 346  Q
    ||||||| || | ||| || || || ||||| |||||||| |||||    
T  120486 aatatcctcctaaaacatacaccttagatgtttctaaatgcgaaga 120531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 121 - 358
Target Start/End: Original strand, 147685 - 147922
Alignment:
Q  121 ctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagatagcgaagtaaatctcgcgga 220  Q
    |||||||||| ||||||||||| || || ||||| || ||||| ||||||||||||| ||||| |||| || ||||||||| |||  |||||||||| ||    
T  147685 ctaagaaagagaaagttgcttacattgatactggagacagtgacccagaattcgattagggttccgatactctcgaagataacgagataaatctcgcaga 147784  T
Q  221 attaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagagcccaaaaatgataaatatcccccaagaacttat 320  Q
    ||||||||||||||| || || || || || ||| ||||||||||||| || ||||||  |||||| || || ||||| |||||||| || | ||| ||     
T  147785 attaaaagatgggccaccatatacctgaaagttaataaggccatcaaatggaaaaaacccagaagaaccaaagaatgacaaatatcctcctaaaacatac 147884  T
Q  321 acttttgatgtgtctaaatgtgaagaaatatttgatct 358  Q
    ||||| ||||| |||||||| ||||| || ||||||||    
T  147885 actttcgatgtttctaaatgcgaagagatctttgatct 147922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 133280 - 133404
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    ||||||||||  |||||||||| ||||| |  ||||| |||||||| |||||  || | |||||||||||||| ||||| ||||| || |||||||| ||    
T  133280 tagattattcggtccgaaagaagttggataaccaataccttagggatatggcaaaattggcagatagagtccgacaagttgaaaggcttaaggctgaaaa 133379  T
Q  101 agccaggacaaataggttccctaag 125  Q
     |||||||||||||| |||||||||    
T  133380 ggccaggacaaatagattccctaag 133404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 137809 - 137933
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    ||||||||||  |||||||||| ||||| |  ||||| |||||||| |||||  || | |||||||||||||| ||||| ||||| || |||||||| ||    
T  137809 tagattattcggtccgaaagaagttggataaccaataccttagggatatggcaaaattggcagatagagtccgacaagttgaaaggcttaaggctgaaaa 137908  T
Q  101 agccaggacaaataggttccctaag 125  Q
     |||||||||||||| |||||||||    
T  137909 ggccaggacaaatagattccctaag 137933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 8620 - 8800
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaa 100  Q
    ||||||||||||| ||||||||||| || ||||||||||||||||||||||||||  |||||||||| || |||||||| || ||| | || ||||| ||    
T  8620 tagattattctattcgaaagaaattagatacacaatatcttagggacatggcgcagttagcagatagggttcgccaagtcgagagagttaatgctgaaaa 8719  T
Q  101 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattgggg 181  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||| || ||||||||||||||    
T  8720 agccagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggagatagtgagccggaattcgattgggg 8800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 30 - 358
Target Start/End: Complemental strand, 43711 - 43383
Alignment:
Q  30 acacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaaagccaggacaaataggttccctaagaaag 129  Q
    ||||||||||||||||| ||||  ||| |||||||||||||| | |||||  |||| || ||||| || |||||||||||||||||||| ||| ||||||    
T  43711 acacaatatcttagggatatggtacaattagcagatagagtctggcaagtcaaaagccttaaggccgaaaaagccaggacaaataggtttccttagaaag 43612  T
Q  130 aaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagatagcgaagtaaatctcgcggaattaaaaga 229  Q
    |||| |||||||||||||  ||||| || || || ||||||||||||||||| |  ||| ||||||| |||| |||  ||||||| || |||| ||||||    
T  43611 aaaaggttgcttatatcgttactggagacagcgacccagaattcgattggggatctgatactgtcgatgataacgagataaatcttgcagaatcaaaaga 43512  T
Q  230 tgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagagcccaaaaatgataaatatcccccaagaacttatacttttgat 329  Q
    ||||||||| || |||||||| ||| ||||||||||||| || || ||    |||||  | || |||||||||||||| |||| ||| || |||||||||    
T  43511 tgggccgccctatacttgtaagttactaaggccatcaaatggaaagaatcctgaagaagcaaagaatgataaatatcctccaaaaacatacacttttgat 43412  T
Q  330 gtgtctaaatgtgaagaaatatttgatct 358  Q
     | |||||||| ||||| || ||||||||    
T  43411 ttatctaaatgcgaagagatttttgatct 43383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 91; Significance: 5e-44; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 16 - 346
Target Start/End: Complemental strand, 135029 - 134699
Alignment:
Q  16 gaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaaagccaggacaaatag 115  Q
    ||||||| |||||||| |||||||||||||| || |||||  | ||||| |||| ||| ||||| ||||| || |||||||||||||||  |||||||||    
T  135029 gaaagaagttggacactcaatatcttagggatatagcgcagttggcagacagagcccgacaagtcgaaaggcttaaggctgagaaagcccagacaaatag 134930  T
Q  116 gttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagatagcgaagtaaatctc 215  Q
    |||||||||||| || |||||| | ||  | || |||||  | ||||| ||||||||||||||||| |  ||| |||| |||||||  ||| |||||||     
T  134929 gttccctaagaaggagaaagtttcctaagtagatactggatacagtgacccagaattcgattggggatcagatactgttgaagataatgaaataaatctt 134830  T
Q  216 gcggaattaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagagcccaaaaatgataaatatcccccaagaa 315  Q
    || ||||||||||||||||| |||||  | || |||||| |||||||||| ||||| || ||    ||||| |  |||||||| |||||||| || | ||    
T  134829 gcagaattaaaagatgggccaccttatgcctgcaaattactaaggccatcgaacggaaagaatcctgaagaacttaaaaatgacaaatatcctcctaaaa 134730  T
Q  316 cttatacttttgatgtgtctaaatgtgaaga 346  Q
    | |||||||| ||||| ||||||||||||||    
T  134729 catatactttcgatgtttctaaatgtgaaga 134699  T

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Target: scaffold0241 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 273 - 370
Target Start/End: Original strand, 10479 - 10576
Alignment:
Q  273 aaaaacgtagaagagcccaaaaatgataaatatcccccaagaacttatacttttgatgtgtctaaatgtgaagaaatatttgatctattagttgctga 370  Q
    ||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||  ||||||||||    
T  10479 aaaaatgtagaagagtccaaaaatgataaatatcccccaaaaacttatacttttgatgtatctaagtgtgaagaaatatttgatcttctagttgctga 10576  T

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Target: scaffold1714 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1714
Description:

Target: scaffold1714; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 1387 - 1445
Alignment:
Q  30 acacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagact 88  Q
    ||||||||||||||||| ||||| ||| |||| |||||| |||||||||| ||||||||    
T  1387 acacaatatcttagggatatggcacaattagcggatagaatccgccaagttgaaagact 1445  T

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Target: scaffold0757 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0757
Description:

Target: scaffold0757; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 1868 - 1954
Alignment:
Q  1 tagattattctatccgaaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagac 87  Q
    |||| |||||||| ||||||||| | || || |||||||| || || ||||| ||| |||| ||||||||||| ||||| |||||||    
T  1868 tagactattctattcgaaagaaactagatacgcaatatctcagagatatggcacaattagctgatagagtccgacaagttgaaagac 1954  T

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Target: scaffold0401 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 1397 - 1489
Alignment:
Q  17 aaagaaattggacacacaatatcttagggacatggcgcaactagcagatagagtccgccaagtggaaagactcaaggctgagaaagccaggac 109  Q
    ||||||||| || ||||||||||| || || ||||| ||| |||| ||||| ||||  ||||| |||||||| || ||||| ||||| |||||    
T  1397 aaagaaattagatacacaatatctaagagatatggcacaattagctgatagggtccaacaagtcgaaagacttaaagctgaaaaagcaaggac 1489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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