View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8208_1D_low_38 (Length: 286)
Name: NF8208_1D_low_38
Description: NF8208_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8208_1D_low_38 |
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Alignment Details
Target: chr2 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 113 - 192
Target Start/End: Original strand, 44676801 - 44676881
Alignment:
| Q |
113 |
gaataggaggaatttagcatttgggaagtcacaaatgagaggggaacaaagacgagacaatgagaagac-ttagtgacaag |
192 |
Q |
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| T |
44676801 |
gaataggaggaatttagcatttgggaagtcacaaatgagaggggaacaaagacgagacaatgagaagactttagtgacaag |
44676881 |
T |
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