View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8208_1D_low_53 (Length: 248)

Name: NF8208_1D_low_53
Description: NF8208_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8208_1D_low_53
NF8208_1D_low_53
[»] chr1 (16 HSPs)
chr1 (1-248)||(40640585-40640832)
chr1 (93-157)||(3796001-3796065)
chr1 (93-157)||(5698124-5698188)
chr1 (93-157)||(14390420-14390484)
chr1 (95-157)||(4640130-4640192)
chr1 (92-157)||(27667672-27667737)
chr1 (93-157)||(35179818-35179882)
chr1 (93-157)||(43847466-43847530)
chr1 (97-156)||(4361098-4361157)
chr1 (93-156)||(31496608-31496671)
chr1 (93-155)||(5698506-5698568)
chr1 (95-157)||(23259085-23259147)
chr1 (95-157)||(44109969-44110031)
chr1 (99-157)||(44299981-44300039)
chr1 (93-154)||(41865285-41865346)
chr1 (93-157)||(9223838-9223902)
[»] chr4 (27 HSPs)
chr4 (93-157)||(19869958-19870022)
chr4 (93-157)||(10658920-10658984)
chr4 (93-157)||(10873065-10873129)
chr4 (93-157)||(19912671-19912735)
chr4 (95-157)||(26923576-26923638)
chr4 (95-157)||(30411289-30411351)
chr4 (93-153)||(14269864-14269924)
chr4 (93-157)||(43590532-43590596)
chr4 (93-157)||(45549651-45549715)
chr4 (93-157)||(50792453-50792517)
chr4 (93-157)||(55610661-55610725)
chr4 (97-157)||(55660548-55660608)
chr4 (95-157)||(48953030-48953092)
chr4 (93-150)||(33984086-33984143)
chr4 (95-156)||(45618061-45618122)
chr4 (98-155)||(49648859-49648916)
chr4 (93-150)||(54683595-54683652)
chr4 (93-154)||(55496077-55496138)
chr4 (93-157)||(202288-202352)
chr4 (97-157)||(1771877-1771937)
chr4 (93-157)||(2390307-2390371)
chr4 (92-148)||(6287834-6287890)
chr4 (94-150)||(7113559-7113615)
chr4 (93-157)||(20986272-20986336)
chr4 (93-157)||(27531828-27531892)
chr4 (97-157)||(31624435-31624495)
chr4 (97-157)||(50790826-50790886)
[»] chr2 (23 HSPs)
chr2 (93-157)||(1086041-1086105)
chr2 (94-157)||(33178960-33179023)
chr2 (96-157)||(18109752-18109813)
chr2 (93-157)||(36600935-36600999)
chr2 (97-156)||(15265379-15265438)
chr2 (93-156)||(36602770-36602833)
chr2 (93-151)||(3147445-3147503)
chr2 (95-157)||(6319537-6319599)
chr2 (93-151)||(8341198-8341256)
chr2 (95-157)||(10247420-10247482)
chr2 (95-157)||(14452300-14452362)
chr2 (95-157)||(33182606-33182668)
chr2 (95-157)||(38928527-38928589)
chr2 (93-150)||(6432168-6432225)
chr2 (93-150)||(10361391-10361448)
chr2 (96-157)||(38245937-38245998)
chr2 (93-150)||(45376907-45376964)
chr2 (93-157)||(7183319-7183383)
chr2 (93-157)||(26340071-26340135)
chr2 (93-157)||(37240947-37241011)
chr2 (95-155)||(38928603-38928663)
chr2 (93-157)||(40862241-40862304)
chr2 (93-157)||(44526024-44526088)
[»] chr3 (21 HSPs)
chr3 (93-157)||(34785915-34785979)
chr3 (95-157)||(50935713-50935775)
chr3 (93-157)||(39534978-39535042)
chr3 (93-156)||(12122919-12122982)
chr3 (93-156)||(48747402-48747465)
chr3 (95-157)||(7041730-7041792)
chr3 (95-157)||(32111597-32111659)
chr3 (95-157)||(42167369-42167431)
chr3 (93-150)||(9558904-9558961)
chr3 (96-157)||(46114989-46115050)
chr3 (93-157)||(40374545-40374609)
chr3 (93-157)||(41888807-41888871)
chr3 (93-157)||(42877238-42877302)
chr3 (93-157)||(46668339-46668403)
chr3 (99-157)||(22978083-22978141)
chr3 (95-157)||(43860726-43860788)
chr3 (94-156)||(50938275-50938337)
chr3 (93-154)||(51980730-51980791)
chr3 (93-157)||(5505930-5505994)
chr3 (93-157)||(6586263-6586327)
chr3 (94-154)||(12122214-12122274)
[»] chr7 (19 HSPs)
chr7 (95-157)||(3117337-3117399)
chr7 (95-157)||(36121431-36121493)
chr7 (93-157)||(30582669-30582733)
chr7 (93-157)||(35670391-35670455)
chr7 (93-157)||(41406186-41406250)
chr7 (93-156)||(40061161-40061224)
chr7 (93-156)||(44570930-44570993)
chr7 (92-150)||(21920840-21920898)
chr7 (95-157)||(30999381-30999443)
chr7 (95-157)||(33982352-33982414)
chr7 (95-157)||(37658152-37658214)
chr7 (96-157)||(1602163-1602224)
chr7 (92-157)||(9806626-9806691)
chr7 (92-150)||(25696030-25696088)
chr7 (95-157)||(43544933-43544995)
chr7 (93-154)||(46534406-46534467)
chr7 (93-157)||(8932537-8932601)
chr7 (93-157)||(31969503-31969567)
chr7 (93-129)||(38224586-38224622)
[»] chr8 (14 HSPs)
chr8 (93-157)||(12208804-12208868)
chr8 (93-157)||(12453232-12453296)
chr8 (93-157)||(18146340-18146404)
chr8 (93-157)||(43150250-43150314)
chr8 (95-150)||(35057345-35057400)
chr8 (95-157)||(35019487-35019549)
chr8 (95-157)||(45069856-45069918)
chr8 (93-154)||(2773623-2773684)
chr8 (93-157)||(43873956-43874020)
chr8 (93-153)||(45237834-45237894)
chr8 (95-157)||(31642786-31642848)
chr8 (93-157)||(4477656-4477720)
chr8 (92-132)||(23625906-23625946)
chr8 (93-157)||(40532056-40532119)
[»] chr6 (13 HSPs)
chr6 (93-157)||(1789785-1789849)
chr6 (93-157)||(18368771-18368835)
chr6 (93-157)||(5090121-5090185)
chr6 (93-157)||(15508347-15508411)
chr6 (93-157)||(18801698-18801762)
chr6 (95-157)||(24159238-24159300)
chr6 (95-157)||(32562448-32562510)
chr6 (97-154)||(6834086-6834143)
chr6 (93-150)||(21459020-21459077)
chr6 (119-156)||(21526296-21526333)
chr6 (95-151)||(1290382-1290438)
chr6 (93-157)||(4976522-4976586)
chr6 (93-157)||(5956420-5956484)
[»] scaffold0115 (2 HSPs)
scaffold0115 (93-156)||(4147-4210)
scaffold0115 (93-156)||(11887-11950)
[»] scaffold0009 (1 HSPs)
scaffold0009 (97-157)||(94441-94501)
[»] chr5 (14 HSPs)
chr5 (93-157)||(1923945-1924009)
chr5 (93-157)||(8520495-8520559)
chr5 (93-148)||(17645304-17645359)
chr5 (95-154)||(36944280-36944339)
chr5 (95-154)||(36959466-36959525)
chr5 (111-157)||(3033335-3033381)
chr5 (95-157)||(3033393-3033455)
chr5 (95-157)||(8520567-8520629)
chr5 (95-157)||(11575622-11575684)
chr5 (95-157)||(15524362-15524424)
chr5 (93-130)||(5050166-5050203)
chr5 (93-157)||(3078578-3078642)
chr5 (93-153)||(4559521-4559581)
chr5 (94-154)||(7157538-7157598)
[»] scaffold1391 (1 HSPs)
scaffold1391 (97-154)||(1535-1592)


Alignment Details
Target: chr1 (Bit Score: 236; Significance: 1e-130; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 40640585 - 40640832
Alignment:
Q  1 acctttggaagatgaaattatgacaactaagttacttaacaatttgcacgcgaagccctacaactaagttagaaataagttagattgactgagctgtgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  40640585 acctttggaagatgaaattatgacaactaagttacttaacaatttgcacgcgaagccctacaactaagttagaaataagttagattgactaagctgtgtt 40640684  T
Q  101 tggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttggataggtaatacatgtttgctaacacaaaaaagcttttttcac 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40640685 tggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttggataggtaatacatgtttgctaacacaaaaaagcttttttcac 40640784  T
Q  201 tagcttatcgaggatggagatgaaagagtaggattagggaattgatga 248  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||    
T  40640785 tagcttatcaaggatgaagatgaaagagtaggattagggaattgatga 40640832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 3796065 - 3796001
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||||| ||| ||| ||||||||||||| |   ||||||||||||||||||||||    
T  3796065 gctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttg 3796001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 5698124 - 5698188
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||||| ||| ||| ||||||||||||| |   ||||||||||||||||||||||    
T  5698124 gctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttg 5698188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 14390420 - 14390484
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||||| ||| ||| ||||||||||||| |   ||||||||||||||||||||||    
T  14390420 gctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttg 14390484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 157
Target Start/End: Complemental strand, 4640192 - 4640130
Alignment:
Q  95 tgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    ||||||||||||||  |||||| ||||||||||||| |   ||||||||||||||||||||||    
T  4640192 tgtgtttggtaacacgaataagctagcttatagcttgttggactagcttataagcttgttttg 4640130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 27667672 - 27667737
Alignment:
Q  92 agctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    ||||||||||||||||| |||  || ||| |||||||||||  |||||||||||||| ||||||||    
T  27667672 agctgtgtttggtaacacaaaatagttagtttatagcttattgaactagcttataagtttgttttg 27667737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 35179818 - 35179882
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||||| ||| ||| ||||||||||||| |   ||||||||||||| ||||||||    
T  35179818 gctgtgtttggtaacataaaaaagctagcttatagcttgttggactagcttataagtttgttttg 35179882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 43847530 - 43847466
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    ||||||||||||||||  |||||| |||||||||| || ||  ||||||||||||||| ||||||    
T  43847530 gctgtgtttggtaacacgaataagctagcttatagtttgtcggactagcttataagctagttttg 43847466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 156
Target Start/End: Complemental strand, 4361157 - 4361098
Alignment:
Q  97 tgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgtttt 156  Q
    |||||||||||| ||| ||| |||||||||| ||||   |||||||||||||||||||||    
T  4361157 tgtttggtaacacaaaaaagttagcttatagtttattggactagcttataagcttgtttt 4361098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 156
Target Start/End: Original strand, 31496608 - 31496671
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgtttt 156  Q
    |||||||||||||||| | ||||| ||||||||||||| |   |||||||||||| ||||||||    
T  31496608 gctgtgtttggtaacacagataagctagcttatagcttcttggactagcttataaacttgtttt 31496671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 155
Target Start/End: Original strand, 5698506 - 5698568
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttt 155  Q
    |||||||||||||||| ||| ||| ||||||||||||| |   |||| |||||||||||||||    
T  5698506 gctgtgtttggtaacacaaaaaagctagcttatagcttgttggactaacttataagcttgttt 5698568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 157
Target Start/End: Original strand, 23259085 - 23259147
Alignment:
Q  95 tgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    ||||||||||||||  |||||| ||||||||||||| |   ||||||||||||| ||||||||    
T  23259085 tgtgtttggtaacacgaataagttagcttatagcttgttggactagcttataagtttgttttg 23259147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 157
Target Start/End: Complemental strand, 44110031 - 44109969
Alignment:
Q  95 tgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||| | ||||| ||||||| ||||||||||||| |   ||||||||||||||||||||||    
T  44110031 tgtgttagataacacaaataagctagcttatagcttgttggactagcttataagcttgttttg 44109969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 157
Target Start/End: Complemental strand, 44300039 - 44299981
Alignment:
Q  99 tttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    ||||||||||  |||||| ||||||||||||| |   ||||||||||||||||||||||    
T  44300039 tttggtaacacgaataagctagcttatagcttgttggactagcttataagcttgttttg 44299981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 154
Target Start/End: Original strand, 41865285 - 41865346
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgtt 154  Q
    |||||||||||||||| ||| ||| ||||||||||||| |   | |||||||||||||||||    
T  41865285 gctgtgtttggtaacacaaaaaagctagcttatagcttcttggattagcttataagcttgtt 41865346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 9223838 - 9223902
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||||| ||| ||| || |||||||||| |   |||| |||||||||||||||||    
T  9223838 gctgtgtttggtaacacaaaaaagctaacttatagcttgttggactaacttataagcttgttttg 9223902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 9e-17; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 19869958 - 19870022
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    ||||||||||||||||  |||||| |||||||||||||||  |||||||||||||||||||||||    
T  19869958 gctgtgtttggtaacacgaataagctagcttatagcttattgaactagcttataagcttgttttg 19870022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 10658984 - 10658920
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    ||||||||||||||||  ||| || |||||||||||||||   ||||||||||||||||||||||    
T  10658984 gctgtgtttggtaacacgaattagctagcttatagcttattggactagcttataagcttgttttg 10658920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 10873129 - 10873065
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    ||||||||||||||||  ||| || |||||||||||||||   ||||||||||||||||||||||    
T  10873129 gctgtgtttggtaacacgaattagctagcttatagcttattggactagcttataagcttgttttg 10873065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 19912671 - 19912735
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||||| ||| ||| ||||||||||||| |   ||||||||||||||||||||||    
T  19912671 gctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttg 19912735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 157
Target Start/End: Complemental strand, 26923638 - 26923576
Alignment:
Q  95 tgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||| ||| ||| ||||||||| ||| | ||||||||||||||||| ||||||    
T  26923638 tgtgtttggtaacataaaaaagctagcttataacttgttaaactagcttataagctagttttg 26923576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 157
Target Start/End: Complemental strand, 30411351 - 30411289
Alignment:
Q  95 tgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||| ||| ||| ||||||||||||| |   ||||||||||||||||||||||    
T  30411351 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttg 30411289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 153
Target Start/End: Complemental strand, 14269924 - 14269864
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgt 153  Q
    ||||||||||||||||  |||||| ||||||||||||| |   ||||||||||||||||||    
T  14269924 gctgtgtttggtaacacgaataagctagcttatagcttgttggactagcttataagcttgt 14269864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 43590532 - 43590596
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    ||||||||||||||||  |||||| ||||||||||||| |   ||||||||||||| ||||||||    
T  43590532 gctgtgtttggtaacacgaataagctagcttatagcttgttggactagcttataagtttgttttg 43590596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 45549651 - 45549715
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||||| ||| ||| ||||||||||||| |    |||||||||||||||||||||    
T  45549651 gctgtgtttggtaacacaaaaaagctagcttatagcttgttgggctagcttataagcttgttttg 45549715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 50792517 - 50792453
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    ||||||||||||||||  |||||| ||| ||||||||| |   ||||||||||||||||||||||    
T  50792517 gctgtgtttggtaacacgaataagctagtttatagcttgttggactagcttataagcttgttttg 50792453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 55610661 - 55610725
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||||| ||| ||  ||||||||||||| |   ||||||||||||||||||||||    
T  55610661 gctgtgtttggtaacacaaaaaaactagcttatagcttgttgtactagcttataagcttgttttg 55610725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 157
Target Start/End: Original strand, 55660548 - 55660608
Alignment:
Q  97 tgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||| ||||||| ||||||||||||| |   |||||||||||| |||||||||    
T  55660548 tgtttggtaacataaataagctagcttatagcttgttggactagcttataaacttgttttg 55660608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 157
Target Start/End: Original strand, 48953030 - 48953092
Alignment:
Q  95 tgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    ||||||||||||||   ||||| ||||||||||||| |   ||||||||||||||||||||||    
T  48953030 tgtgtttggtaacacggataagctagcttatagcttgttggactagcttataagcttgttttg 48953092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 150
Target Start/End: Original strand, 33984086 - 33984143
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagct 150  Q
    |||||||||||||||| ||| ||| ||||||||||||| |  || |||||||||||||    
T  33984086 gctgtgtttggtaacacaaaaaagctagcttatagcttgttgaattagcttataagct 33984143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 156
Target Start/End: Original strand, 45618061 - 45618122
Alignment:
Q  95 tgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgtttt 156  Q
    |||||||||||||| ||||||| |||||||| | || | | ||||||||||||| |||||||    
T  45618061 tgtgtttggtaacataaataagctagcttatggtttgttagactagcttataagtttgtttt 45618122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 155
Target Start/End: Complemental strand, 49648916 - 49648859
Alignment:
Q  98 gtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttt 155  Q
    |||||||||||  |||||| ||||||||||||| |   ||||||||||||||||||||    
T  49648916 gtttggtaacacgaataagctagcttatagcttgttggactagcttataagcttgttt 49648859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 150
Target Start/End: Original strand, 54683595 - 54683652
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagct 150  Q
    |||||||||||||||| ||||||| ||||||||| ||| | | | |||||||||||||    
T  54683595 gctgtgtttggtaacataaataagctagcttataacttgttagattagcttataagct 54683652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 154
Target Start/End: Complemental strand, 55496138 - 55496077
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgtt 154  Q
    ||||| |||||||||| ||| ||| ||||||||||||| |   |||||||||||||||||||    
T  55496138 gctgtttttggtaacacaaaaaagttagcttatagcttgttggactagcttataagcttgtt 55496077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 202288 - 202352
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||||| ||| ||| ||||||||||||| |   | ||||||||||||||| ||||    
T  202288 gctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagcttgctttg 202352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 157
Target Start/End: Complemental strand, 1771937 - 1771877
Alignment:
Q  97 tgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||| ||||| ||| ||||||||||||||||| |   ||||||||||||||||| ||||    
T  1771937 tgtttgataacacaaaaaagatagcttatagcttgttggactagcttataagcttgctttg 1771877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 2390371 - 2390307
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||||| ||| ||| ||||||||||||| |   |||| |||||||| ||||||||    
T  2390371 gctgtgtttggtaacacaaaaaagctagcttatagcttcttggactaacttataagtttgttttg 2390307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 148
Target Start/End: Original strand, 6287834 - 6287890
Alignment:
Q  92 agctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataag 148  Q
    ||||||||||||||||| ||| ||| ||||||||||||| | | | |||||||||||    
T  6287834 agctgtgtttggtaacacaaaaaagttagcttatagcttcttagattagcttataag 6287890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 150
Target Start/End: Complemental strand, 7113615 - 7113559
Alignment:
Q  94 ctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagct 150  Q
    ||||||||||||||| ||| ||| ||||||||||||| |   |||||||||||||||    
T  7113615 ctgtgtttggtaacataaaaaagctagcttatagcttgttggactagcttataagct 7113559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 20986272 - 20986336
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||||| ||||||| || |||||||||| |   |||| ||||||| |||||||||    
T  20986272 gctgtgtttggtaacataaataagctaacttatagcttgttggactaacttataaacttgttttg 20986336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 27531828 - 27531892
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||||| ||||| | || |||||||||| |   ||||| ||||||||||||||||    
T  27531828 gctgtgtttggtaacacaaataggctaacttatagcttgttggactagtttataagcttgttttg 27531892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 157
Target Start/End: Complemental strand, 31624495 - 31624435
Alignment:
Q  97 tgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    ||||||||||||  ||||||  ||||||||| || | | ||||||||||||||||||||||    
T  31624495 tgtttggtaacacgaataagcgagcttatagtttgttagactagcttataagcttgttttg 31624435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 157
Target Start/End: Original strand, 50790826 - 50790886
Alignment:
Q  97 tgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    ||||||||||||  |||||| ||||||||| ||| |   ||||||||||||||||||||||    
T  50790826 tgtttggtaacacgaataagctagcttataacttgttggactagcttataagcttgttttg 50790886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 9e-17; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 1086041 - 1086105
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||||| ||||||| ||||||||||||| | |||||| |||||||||||||||||    
T  1086041 gctgtgtttggtaacacaaataagctagcttatagcttgttaaactaacttataagcttgttttg 1086105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 157
Target Start/End: Original strand, 33178960 - 33179023
Alignment:
Q  94 ctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||||  |||||| ||||||||||||| |   ||||||||||||||||||||||    
T  33178960 ctgtgtttggtaacacgaataagctagcttatagcttgttggactagcttataagcttgttttg 33179023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 157
Target Start/End: Complemental strand, 18109813 - 18109752
Alignment:
Q  96 gtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    ||||||||||||| ||| ||| ||||||||||||| |   ||||||||||||||||||||||    
T  18109813 gtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttg 18109752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 36600935 - 36600999
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||| |||||  |||||| ||||||||||||| |   ||||||||||||||||||||||    
T  36600935 gctgtgtttgataacacgaataagctagcttatagcttgttggactagcttataagcttgttttg 36600999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 156
Target Start/End: Complemental strand, 15265438 - 15265379
Alignment:
Q  97 tgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgtttt 156  Q
    |||||||||||| ||||||| ||||||||||||| |    ||||||||||||||||||||    
T  15265438 tgtttggtaacacaaataagttagcttatagcttcttgggctagcttataagcttgtttt 15265379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 156
Target Start/End: Complemental strand, 36602833 - 36602770
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgtttt 156  Q
    ||||||||||||||||  |||||| ||||||||||||| |   ||||||| |||||||||||||    
T  36602833 gctgtgtttggtaacattaataagctagcttatagcttgttggactagctgataagcttgtttt 36602770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 151
Target Start/End: Original strand, 3147445 - 3147503
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagctt 151  Q
    |||||||||||||||| ||||||| ||||||||| ||| | | | ||||||||||||||    
T  3147445 gctgtgtttggtaacataaataagttagcttataacttgttagattagcttataagctt 3147503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 157
Target Start/End: Original strand, 6319537 - 6319599
Alignment:
Q  95 tgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    ||||||||||||||  |||||| ||||||| ||||| |   ||||||||||||||||||||||    
T  6319537 tgtgtttggtaacaagaataagctagcttacagcttgttggactagcttataagcttgttttg 6319599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 151
Target Start/End: Complemental strand, 8341256 - 8341198
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagctt 151  Q
    |||||||||||||||| ||||||| ||||||||| ||| |   ||||||||||||||||    
T  8341256 gctgtgtttggtaacacaaataagctagcttataacttgttggactagcttataagctt 8341198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 157
Target Start/End: Complemental strand, 10247482 - 10247420
Alignment:
Q  95 tgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||| ||| ||| |||||||||| || |   ||||||||||||||||||||||    
T  10247482 tgtgtttggtaacacaaaaaagttagcttatagtttgttggactagcttataagcttgttttg 10247420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 157
Target Start/End: Original strand, 14452300 - 14452362
Alignment:
Q  95 tgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    ||||||||||||||  ||| || ||||||||||||| |   ||||||||||||||||||||||    
T  14452300 tgtgtttggtaacacgaattagctagcttatagcttgttggactagcttataagcttgttttg 14452362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 157
Target Start/End: Complemental strand, 33182668 - 33182606
Alignment:
Q  95 tgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    ||||||||||||||  |||||| ||||||||||||  |   ||||||||||||||||||||||    
T  33182668 tgtgtttggtaacacgaataagctagcttatagctcgtaggactagcttataagcttgttttg 33182606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 157
Target Start/End: Complemental strand, 38928589 - 38928527
Alignment:
Q  95 tgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||| ||| ||| ||||||||||||| |   ||||||||||||||| ||||||    
T  38928589 tgtgtttggtaacataaaaaagctagcttatagcttgttggactagcttataagctagttttg 38928527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 150
Target Start/End: Original strand, 6432168 - 6432225
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagct 150  Q
    ||||| |||||||||| ||||||| ||||||||||||| |   |||||||||||||||    
T  6432168 gctgtatttggtaacacaaataagctagcttatagcttgttggactagcttataagct 6432225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 150
Target Start/End: Original strand, 10361391 - 10361448
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagct 150  Q
    |||||||||||||||| ||| ||| ||||||||||||| |   |||||||||||||||    
T  10361391 gctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagct 10361448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 157
Target Start/End: Complemental strand, 38245998 - 38245937
Alignment:
Q  96 gtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    ||||||||||||| ||| ||| |||||||||| ||||   |||| |||||||||||||||||    
T  38245998 gtgtttggtaacataaaaaagctagcttatagtttattggactaacttataagcttgttttg 38245937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 150
Target Start/End: Original strand, 45376907 - 45376964
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagct 150  Q
    |||||||||||||||| ||||||| ||| ||||||||| |   |||||||||||||||    
T  45376907 gctgtgtttggtaacacaaataagctagtttatagcttgttggactagcttataagct 45376964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 7183383 - 7183319
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||||| ||| ||| |||||||||| || |   ||||| ||||||||||||||||    
T  7183383 gctgtgtttggtaacacaaaaaagctagcttatagtttgttggactagtttataagcttgttttg 7183319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 26340135 - 26340071
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||||| ||| ||| || |||||| ||| |   ||||||||||||||||||||||    
T  26340135 gctgtgtttggtaacacaaaaaagctaacttataacttgttggactagcttataagcttgttttg 26340071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 37240947 - 37241011
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||| ||||| | ||||||| ||||||||| ||| | | ||||||||||||| ||||||||    
T  37240947 gctgtgttcggtaatacaaataagctagcttataacttgttagactagcttataagtttgttttg 37241011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 155
Target Start/End: Complemental strand, 38928663 - 38928603
Alignment:
Q  95 tgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttt 155  Q
    ||||||||||||||  |||||| |||||||||| || |   ||||||||||||||||||||    
T  38928663 tgtgtttggtaacatgaataagctagcttatagtttgttggactagcttataagcttgttt 38928603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 40862304 - 40862241
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||||| ||| ||| ||| ||||||||| |   ||||||||||||||||||||||    
T  40862304 gctgtgtttggtaacacaaa-aagctagtttatagcttgttggactagcttataagcttgttttg 40862241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 44526088 - 44526024
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||||| ||||||| |||||| |||||| |   || ||||||||| |||||||||    
T  44526088 gctgtgtttggtaacataaataagctagcttttagcttgttggacaagcttataaacttgttttg 44526024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 34785979 - 34785915
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||||| | ||||| |||||||||||||||   ||||||||||||||||||||||    
T  34785979 gctgtgtttggtaacacacataagctagcttatagcttattggactagcttataagcttgttttg 34785915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 157
Target Start/End: Original strand, 50935713 - 50935775
Alignment:
Q  95 tgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    ||||||||||||||  |||||| |||||||||||||||   ||||||||||||||||||||||    
T  50935713 tgtgtttggtaacacgaataagctagcttatagcttattggactagcttataagcttgttttg 50935775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 39535042 - 39534978
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||||||||||||| |||||| ||||||||   || ||||||||||||| |||||    
T  39535042 gctgtgtttggtaacagaaataagctagcttgtagcttattggacaagcttataagctttttttg 39534978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 156
Target Start/End: Complemental strand, 12122982 - 12122919
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgtttt 156  Q
    |||||||||||||||| ||| ||| ||||||||||||| |   |||||||||||||||||||||    
T  12122982 gctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgtttt 12122919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 156
Target Start/End: Original strand, 48747402 - 48747465
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgtttt 156  Q
    |||||||||||||||| ||| ||| |||||||||| ||||   |||||||||||||||||||||    
T  48747402 gctgtgtttggtaacacaaaaaagttagcttatagtttattggactagcttataagcttgtttt 48747465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 157
Target Start/End: Original strand, 7041730 - 7041792
Alignment:
Q  95 tgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    ||||||||||||||  |||||| ||||||||||||| |   ||||||||||||||||||||||    
T  7041730 tgtgtttggtaacaagaataagctagcttatagcttgttggactagcttataagcttgttttg 7041792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 157
Target Start/End: Complemental strand, 32111659 - 32111597
Alignment:
Q  95 tgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||| ||| ||| ||||||||||||| |   ||||||||||||||||||||||    
T  32111659 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttg 32111597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 157
Target Start/End: Complemental strand, 42167431 - 42167369
Alignment:
Q  95 tgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    ||||||||||||||  |||||| ||||||||||||| |   ||||||||||||||||||||||    
T  42167431 tgtgtttggtaacacgaataagctagcttatagcttgttggactagcttataagcttgttttg 42167369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 150
Target Start/End: Complemental strand, 9558961 - 9558904
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagct 150  Q
    |||||||||||||||| ||||||| ||||||||||||| | | | |||||||||||||    
T  9558961 gctgtgtttggtaacataaataagctagcttatagcttgttagattagcttataagct 9558904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 157
Target Start/End: Original strand, 46114989 - 46115050
Alignment:
Q  96 gtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    ||||||||||||| ||||||| ||||||||||||| |   | ||||||||||||||||||||    
T  46114989 gtgtttggtaacacaaataagctagcttatagcttgttggattagcttataagcttgttttg 46115050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 40374609 - 40374545
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||||| ||| ||| || |||||||||| |   ||||||||||||||||||||||    
T  40374609 gctgtgtttggtaacacaaaaaagctaacttatagcttgttggactagcttataagcttgttttg 40374545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 41888807 - 41888871
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    ||||||||||||||||  |||||| |||||||||| || |   ||||||||||||||||||||||    
T  41888807 gctgtgtttggtaacacgaataagctagcttatagtttgttggactagcttataagcttgttttg 41888871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 42877238 - 42877302
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    ||||||||||||||||  |||||| ||||||||||||| |   |||||||||||||| |||||||    
T  42877238 gctgtgtttggtaacacgaataagctagcttatagcttcttggactagcttataagcatgttttg 42877302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 46668339 - 46668403
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||||| ||| ||| ||||||||||||| |   |||| |||||||||||||||||    
T  46668339 gctgtgtttggtaacataaaaaagctagcttatagcttgttggactaacttataagcttgttttg 46668403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 157
Target Start/End: Original strand, 22978083 - 22978141
Alignment:
Q  99 tttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    ||||||||||  |||||| ||||||||||||| |   ||||||||||||||||||||||    
T  22978083 tttggtaacacgaataagctagcttatagcttgttggactagcttataagcttgttttg 22978141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 157
Target Start/End: Original strand, 43860726 - 43860788
Alignment:
Q  95 tgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||| |  |||||| ||||||||||||| |   ||||||||||||||||||||||    
T  43860726 tgtgtttggtaatacgaataagctagcttatagcttgttggactagcttataagcttgttttg 43860788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 156
Target Start/End: Complemental strand, 50938337 - 50938275
Alignment:
Q  94 ctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgtttt 156  Q
    |||||||||||||||  |||||| ||||||||||||| |   |||||||||||| ||||||||    
T  50938337 ctgtgtttggtaacacgaataagttagcttatagcttgttggactagcttataaccttgtttt 50938275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 154
Target Start/End: Original strand, 51980730 - 51980791
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgtt 154  Q
    |||||||||||||||| ||| ||| ||| ||||||||| |   |||||||||||||||||||    
T  51980730 gctgtgtttggtaacacaaaaaagttagtttatagcttgttggactagcttataagcttgtt 51980791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 5505930 - 5505994
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||||| ||| ||| ||||||||| ||| |   ||||||||||||| ||||||||    
T  5505930 gctgtgtttggtaacacaaaaaagctagcttataacttgttggactagcttataagtttgttttg 5505994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 6586263 - 6586327
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||||| ||| ||| ||| |||||| || |   ||||||||||||||||||||||    
T  6586263 gctgtgtttggtaacataaaaaagttagtttatagtttgttggactagcttataagcttgttttg 6586327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 154
Target Start/End: Complemental strand, 12122274 - 12122214
Alignment:
Q  94 ctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgtt 154  Q
    |||||||||||||||  || ||| ||||||||||||| |  || |||||||||||||||||    
T  12122274 ctgtgtttggtaacaacaagaagctagcttatagcttgttgaattagcttataagcttgtt 12122214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 157
Target Start/End: Complemental strand, 3117399 - 3117337
Alignment:
Q  95 tgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||| ||||||| |||||||||| |||| | | ||||||||||||||||||||    
T  3117399 tgtgtttggtaacaaaaataagttagcttatagtttattatattagcttataagcttgttttg 3117337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 157
Target Start/End: Original strand, 36121431 - 36121493
Alignment:
Q  95 tgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||| ||| |||||||||||||||||||   | ||||||||||||||||||||    
T  36121431 tgtgtttggtaacacaaagaagatagcttatagcttattggattagcttataagcttgttttg 36121493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 30582669 - 30582733
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||||| ||| ||| ||||||||||||| |   ||||||||||||||||||||||    
T  30582669 gctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttg 30582733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 35670455 - 35670391
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||||| ||| ||| ||||||||||||| |   ||||||||||||||||||||||    
T  35670455 gctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttg 35670391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 41406186 - 41406250
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    ||||||||||||||||  |||||| |||||||||||||||   |||| |||||||||||||||||    
T  41406186 gctgtgtttggtaacacgaataagctagcttatagcttattggactatcttataagcttgttttg 41406250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 156
Target Start/End: Original strand, 40061161 - 40061224
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgtttt 156  Q
    |||||||||||||||| ||| ||| ||||||||||||| |   |||||||||||||||||||||    
T  40061161 gctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgtttt 40061224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 156
Target Start/End: Original strand, 44570930 - 44570993
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgtttt 156  Q
    |||||||||||||||| ||| ||| |||||||||||||||   ||||||||||||||| |||||    
T  44570930 gctgtgtttggtaacacaaaaaagttagcttatagcttattggactagcttataagctagtttt 44570993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 92 - 150
Target Start/End: Complemental strand, 21920898 - 21920840
Alignment:
Q  92 agctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagct 150  Q
    ||||||||||||||||| ||||||| ||||||||||||| |   |||||||||||||||    
T  21920898 agctgtgtttggtaacacaaataagctagcttatagcttgttggactagcttataagct 21920840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 157
Target Start/End: Complemental strand, 30999443 - 30999381
Alignment:
Q  95 tgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||| ||||||| ||| |||||||||||   ||||||| ||||||||||||||    
T  30999443 tgtgtttggtaacacaaataagttagtttatagcttattggactagctcataagcttgttttg 30999381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 157
Target Start/End: Complemental strand, 33982414 - 33982352
Alignment:
Q  95 tgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||| |||  |||||| ||||||||||||| | | ||||||||||||||||||||||    
T  33982414 tgtgtttggtgacacgaataagctagcttatagcttgttagactagcttataagcttgttttg 33982352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 157
Target Start/End: Complemental strand, 37658214 - 37658152
Alignment:
Q  95 tgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||| ||| ||| ||||||||||||| |   ||||||||||||||||||||||    
T  37658214 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttg 37658152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 157
Target Start/End: Complemental strand, 1602224 - 1602163
Alignment:
Q  96 gtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    ||||||| |||||  |||||||||||||||||||| |   ||||||||||||||||||||||    
T  1602224 gtgtttgataacacgaataagatagcttatagcttgttggactagcttataagcttgttttg 1602163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 9806691 - 9806626
Alignment:
Q  92 agctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    ||||||||||||||||| ||| ||| ||| ||||||||| |   ||||||||||||||||||||||    
T  9806691 agctgtgtttggtaacataaaaaagttagtttatagcttgttggactagcttataagcttgttttg 9806626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 150
Target Start/End: Original strand, 25696030 - 25696088
Alignment:
Q  92 agctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagct 150  Q
    ||||||||||||||||| ||||||  ||||||||||||| | | | |||||||||||||    
T  25696030 agctgtgtttggtaacataaataaactagcttatagcttgttagattagcttataagct 25696088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 157
Target Start/End: Complemental strand, 43544995 - 43544933
Alignment:
Q  95 tgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    ||||||||||||||  |||||| || |||||||||| |   ||||||||||||||||||||||    
T  43544995 tgtgtttggtaacacgaataagctaacttatagcttgttggactagcttataagcttgttttg 43544933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 154
Target Start/End: Original strand, 46534406 - 46534467
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgtt 154  Q
    |||||||||||||||| ||| ||| ||||||||||||| |   | |||||||||||||||||    
T  46534406 gctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagcttgtt 46534467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 8932601 - 8932537
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||||| ||||||  ||| ||||| ||| |   ||||||||||||||||||||||    
T  8932601 gctgtgtttggtaacacaaataaattagtttataacttgttggactagcttataagcttgttttg 8932537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 31969567 - 31969503
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||||| ||| ||| |||||||||| || |   |||| |||||||||||||||||    
T  31969567 gctgtgtttggtaacacaaaaaagttagcttatagattgttggactaacttataagcttgttttg 31969503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 129
Target Start/End: Original strand, 38224586 - 38224622
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagct 129  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  38224586 gctgtgtttggtaacacaaataagctagcttatagct 38224622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000006; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 12208804 - 12208868
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||||| ||| ||| ||||||||||||| |   ||||||||||||||||||||||    
T  12208804 gctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttg 12208868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 12453232 - 12453296
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||||| ||| ||| ||||||||||||| |   ||||||||||||||||||||||    
T  12453232 gctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttg 12453296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 18146340 - 18146404
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||||| ||| ||| ||||||||||||| |   ||||||||||||||||||||||    
T  18146340 gctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttg 18146404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 43150250 - 43150314
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||||| ||| ||| ||||||||||||| |   ||||||||||||||||||||||    
T  43150250 gctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttg 43150314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 150
Target Start/End: Complemental strand, 35057400 - 35057345
Alignment:
Q  95 tgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagct 150  Q
    |||||||||||||| ||||||||||||||||||||| | | | |||||||||||||    
T  35057400 tgtgtttggtaacataaataagatagcttatagcttgttagattagcttataagct 35057345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 157
Target Start/End: Original strand, 35019487 - 35019549
Alignment:
Q  95 tgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||| | ||||| ||||||||||||||||||||| |   ||||||||||||||||||||||    
T  35019487 tgtgttagataacacaaataagatagcttatagcttgttggactagcttataagcttgttttg 35019549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 157
Target Start/End: Complemental strand, 45069918 - 45069856
Alignment:
Q  95 tgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||| ||| ||| ||||||||||||| |   ||||||||||||||||||||||    
T  45069918 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttg 45069856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 154
Target Start/End: Complemental strand, 2773684 - 2773623
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgtt 154  Q
    |||||||||||||||| ||| ||| ||||||||||||| |   |||||||||||||||||||    
T  2773684 gctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgtt 2773623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 43873956 - 43874020
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    ||||||||||||| || ||| ||| ||| ||||||||| |  |||||||||||||||||||||||    
T  43873956 gctgtgtttggtaccacaaaaaagctagtttatagcttgttgaactagcttataagcttgttttg 43874020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 153
Target Start/End: Complemental strand, 45237894 - 45237834
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgt 153  Q
    |||||||||||||||| ||| ||| ||||||||||||| |  ||| |||||||||||||||    
T  45237894 gctgtgtttggtaacacaaaaaagctagcttatagcttgttgaacaagcttataagcttgt 45237834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 157
Target Start/End: Complemental strand, 31642848 - 31642786
Alignment:
Q  95 tgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    ||||||||||||||  |||||| ||||||||||||| |   ||||| ||||||||||||||||    
T  31642848 tgtgtttggtaacacgaataagctagcttatagcttgttggactagattataagcttgttttg 31642786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 4477720 - 4477656
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||||| ||| ||| ||||||||||||| |   ||||| ||||||| ||||||||    
T  4477720 gctgtgtttggtaacacaaaaaagttagcttatagcttgttggactagattataagtttgttttg 4477656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 132
Target Start/End: Original strand, 23625906 - 23625946
Alignment:
Q  92 agctgtgtttggtaacagaaataagatagcttatagcttat 132  Q
    |||||||||||||||||  |||||| |||||||||||||||    
T  23625906 agctgtgtttggtaacacgaataagctagcttatagcttat 23625946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 40532056 - 40532119
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||||| ||| ||| |||||||||| ||||   |||| |||||||||||||||||    
T  40532056 gctgtgtttggtaacacaaa-aagctagcttatagtttattggactaacttataagcttgttttg 40532119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000006; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 1789785 - 1789849
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||||| ||| ||| ||||||||||||| |   ||||||||||||||||||||||    
T  1789785 gctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttg 1789849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 18368835 - 18368771
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||||| ||| ||| ||||||||||||| |   ||||||||||||||||||||||    
T  18368835 gctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttg 18368771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 5090185 - 5090121
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    ||||||||||||||||  |||||| ||||||||||||| |   ||||||||||||| ||||||||    
T  5090185 gctgtgtttggtaacacgaataagctagcttatagcttcttggactagcttataagtttgttttg 5090121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 15508347 - 15508411
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    ||||||||||||||||  |||||| ||||||||||||| |   |||||||||||||||| |||||    
T  15508347 gctgtgtttggtaacacgaataagctagcttatagcttgttggactagcttataagcttattttg 15508411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 18801698 - 18801762
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||||| ||| ||| ||||||||||||| |   |||| |||||||||||||||||    
T  18801698 gctgtgtttggtaacacaaaaaagctagcttatagcttgttggactaacttataagcttgttttg 18801762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 157
Target Start/End: Original strand, 24159238 - 24159300
Alignment:
Q  95 tgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    ||||||||||||||  |||||| |||||||||| || |   ||||||||||||||||||||||    
T  24159238 tgtgtttggtaacacgaataaggtagcttatagtttgttggactagcttataagcttgttttg 24159300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 157
Target Start/End: Complemental strand, 32562510 - 32562448
Alignment:
Q  95 tgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    ||||||||||||||  |||||| ||||||||||||| |   ||||||||||||| ||||||||    
T  32562510 tgtgtttggtaacacgaataagctagcttatagcttgttggactagcttataagtttgttttg 32562448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 154
Target Start/End: Complemental strand, 6834143 - 6834086
Alignment:
Q  97 tgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgtt 154  Q
    |||||||||||| ||||||| || ||||||| || |  ||||||||||||||||||||    
T  6834143 tgtttggtaacataaataagctatcttatagtttgttgaactagcttataagcttgtt 6834086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 150
Target Start/End: Original strand, 21459020 - 21459077
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagct 150  Q
    |||||||||||||||| | ||||| ||||||||||||| | | | |||||||||||||    
T  21459020 gctgtgtttggtaacatagataagctagcttatagcttgttagattagcttataagct 21459077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 156
Target Start/End: Original strand, 21526296 - 21526333
Alignment:
Q  119 agcttatagcttatcaaactagcttataagcttgtttt 156  Q
    |||||||||||||| | |||||||||||||||||||||    
T  21526296 agcttatagcttattagactagcttataagcttgtttt 21526333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 1290382 - 1290438
Alignment:
Q  95 tgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagctt 151  Q
    |||||||||||| | ||||||| ||||||||||||| | | | ||||||||||||||    
T  1290382 tgtgtttggtaaaataaataagttagcttatagcttgttagaatagcttataagctt 1290438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 4976522 - 4976586
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||||| ||| ||  ||||||||||| | |   ||||||||||||||||||||||    
T  4976522 gctgtgtttggtaacacaaaaaaactagcttatagcctgttggactagcttataagcttgttttg 4976586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 5956420 - 5956484
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||||| | ||||| ||||||||| ||| |   ||||| ||||||||||||||||    
T  5956420 gctgtgtttggtaacatagataagctagcttataacttcttggactagtttataagcttgttttg 5956484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 156
Target Start/End: Original strand, 4147 - 4210
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgtttt 156  Q
    |||||||||||||||| ||| ||| ||||||||||||| |   |||||||||||||||||||||    
T  4147 gctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgtttt 4210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 156
Target Start/End: Original strand, 11887 - 11950
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgtttt 156  Q
    |||||||||||||||| ||| ||| ||||||||||||| |   |||||||||||||||||||||    
T  11887 gctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgtttt 11950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 157
Target Start/End: Complemental strand, 94501 - 94441
Alignment:
Q  97 tgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    ||||||||||||  |||||| ||||||||||||| |  ||||||||||||| |||||||||    
T  94501 tgtttggtaacacgaataagctagcttatagcttgttgaactagcttataaacttgttttg 94441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000001; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 1923945 - 1924009
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||||| ||| ||| ||||||||||||| |   ||||||||||||||||| ||||    
T  1923945 gctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgctttg 1924009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 8520495 - 8520559
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    ||||||||||||||||  |||||| || |||||||||| |   ||||||||||||||||||||||    
T  8520495 gctgtgtttggtaacacgaataagctaacttatagcttgttggactagcttataagcttgttttg 8520559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 17645304 - 17645359
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataag 148  Q
    |||||||||||||||| ||||||| ||||||||||||| | | | |||||||||||    
T  17645304 gctgtgtttggtaacataaataagctagcttatagcttgttagattagcttataag 17645359  T

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Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 154
Target Start/End: Complemental strand, 36944339 - 36944280
Alignment:
Q  95 tgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgtt 154  Q
    |||||||||||||| ||| ||| ||||||||||||| | | |||| ||||||||||||||    
T  36944339 tgtgtttggtaacataaaaaagctagcttatagcttgttagactaacttataagcttgtt 36944280  T

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Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 154
Target Start/End: Original strand, 36959466 - 36959525
Alignment:
Q  95 tgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgtt 154  Q
    |||||||||||||| ||| ||| ||||||||||||| | ||||||| ||| |||||||||    
T  36959466 tgtgtttggtaacacaaaaaagctagcttatagcttgttaaactagtttacaagcttgtt 36959525  T

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Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 157
Target Start/End: Original strand, 3033335 - 3033381
Alignment:
Q  111 aataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||| ||||||||||||| | | ||||||||||||||||||||||    
T  3033335 aataagctagcttatagcttgttagactagcttataagcttgttttg 3033381  T

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Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 157
Target Start/End: Original strand, 3033393 - 3033455
Alignment:
Q  95 tgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||| ||| ||| ||||||||||||| |   ||||||||||||||| ||||||    
T  3033393 tgtgtttggtaacataaaaaagctagcttatagcttgttggactagcttataagctagttttg 3033455  T

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Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 157
Target Start/End: Original strand, 8520567 - 8520629
Alignment:
Q  95 tgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||| ||| ||| |||| |||||||| | | ||||||||||||||| ||||||    
T  8520567 tgtgtttggtaacataaaaaagctagcatatagcttgttagactagcttataagctagttttg 8520629  T

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Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 157
Target Start/End: Original strand, 11575622 - 11575684
Alignment:
Q  95 tgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||| ||| ||| ||||||||||||| |   ||||||||||||| ||||||||    
T  11575622 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagtttgttttg 11575684  T

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Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 157
Target Start/End: Original strand, 15524362 - 15524424
Alignment:
Q  95 tgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    ||||||| ||||||  |||||| ||||||||||||| | | |||||||||||| |||||||||    
T  15524362 tgtgtttcgtaacacgaataagctagcttatagcttgttagactagcttataaccttgttttg 15524424  T

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Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 130
Target Start/End: Complemental strand, 5050203 - 5050166
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagctt 130  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  5050203 gctgtgtttggtaacataaataagctagcttatagctt 5050166  T

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Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 3078642 - 3078578
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 157  Q
    |||||||||||||||| ||| ||| ||||||||| ||| |   |||||||||||| |||||||||    
T  3078642 gctgtgtttggtaacacaaaaaagttagcttataacttgttggactagcttataaacttgttttg 3078578  T

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Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 153
Target Start/End: Complemental strand, 4559581 - 4559521
Alignment:
Q  93 gctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgt 153  Q
    |||||||||||||||| ||| ||| ||||||||||||| |   || |||||||||||||||    
T  4559581 gctgtgtttggtaacataaaaaagctagcttatagcttgttggacaagcttataagcttgt 4559521  T

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Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 154
Target Start/End: Complemental strand, 7157598 - 7157538
Alignment:
Q  94 ctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgtt 154  Q
    ||||||||||||||| ||| ||| ||||||||||||| |   |||| ||||||||||||||    
T  7157598 ctgtgtttggtaacacaaaaaagctagcttatagcttgttggactaacttataagcttgtt 7157538  T

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Target: scaffold1391 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1391
Description:

Target: scaffold1391; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 154
Target Start/End: Complemental strand, 1592 - 1535
Alignment:
Q  97 tgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgtt 154  Q
    |||||||||||| ||||||| || ||||||| || |  ||||||||||||||||||||    
T  1592 tgtttggtaacataaataagctatcttatagtttgttgaactagcttataagcttgtt 1535  T

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