View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8208_2D_high_1 (Length: 468)

Name: NF8208_2D_high_1
Description: NF8208_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8208_2D_high_1
NF8208_2D_high_1
[»] chr3 (53 HSPs)
chr3 (1-468)||(829369-829836)
chr3 (72-243)||(34420641-34420813)
chr3 (70-243)||(40272808-40272982)
chr3 (71-243)||(46421031-46421207)
chr3 (71-243)||(25944457-25944630)
chr3 (71-243)||(26573115-26573287)
chr3 (78-237)||(19730996-19731155)
chr3 (73-230)||(13628789-13628948)
chr3 (93-243)||(8247706-8247859)
chr3 (74-232)||(39203515-39203671)
chr3 (71-243)||(13730599-13730774)
chr3 (73-233)||(29366719-29366881)
chr3 (71-241)||(26869696-26869866)
chr3 (72-243)||(53996563-53996735)
chr3 (75-243)||(22609754-22609921)
chr3 (72-230)||(5173717-5173876)
chr3 (168-243)||(45620922-45620998)
chr3 (84-200)||(14986989-14987106)
chr3 (74-186)||(45786214-45786327)
chr3 (70-218)||(54374341-54374490)
chr3 (73-243)||(12914034-12914205)
chr3 (72-187)||(54484735-54484850)
chr3 (72-200)||(516441-516571)
chr3 (91-232)||(9607202-9607345)
chr3 (69-187)||(49013468-49013587)
chr3 (72-243)||(1217077-1217247)
chr3 (85-233)||(6411833-6411980)
chr3 (78-234)||(19751575-19751731)
chr3 (86-200)||(10795435-10795550)
chr3 (71-243)||(52926216-52926380)
chr3 (72-153)||(34771362-34771442)
chr3 (73-243)||(16735428-16735598)
chr3 (73-153)||(25517169-25517248)
chr3 (72-243)||(44403553-44403725)
chr3 (74-200)||(31592881-31593004)
chr3 (168-243)||(10870044-10870121)
chr3 (75-233)||(22122918-22123074)
chr3 (69-137)||(24577929-24577997)
chr3 (87-198)||(7943024-7943134)
chr3 (70-153)||(15797299-15797381)
chr3 (84-153)||(353359-353429)
chr3 (69-115)||(4495671-4495717)
chr3 (75-153)||(16130354-16130432)
chr3 (71-137)||(24851298-24851364)
chr3 (104-237)||(30928177-30928310)
chr3 (75-200)||(45139479-45139603)
chr3 (83-243)||(45948847-45949010)
chr3 (104-153)||(1121254-1121303)
chr3 (71-116)||(40390356-40390401)
chr3 (103-183)||(9276313-9276391)
chr3 (69-137)||(24578019-24578087)
chr3 (71-115)||(43956469-43956513)
chr3 (71-115)||(47624215-47624259)
[»] chr5 (42 HSPs)
chr5 (73-243)||(38879546-38879719)
chr5 (71-243)||(24448855-24449028)
chr5 (88-233)||(27328728-27328875)
chr5 (71-243)||(19142940-19143111)
chr5 (74-159)||(12575660-12575745)
chr5 (72-243)||(43334167-43334341)
chr5 (104-229)||(34074592-34074717)
chr5 (73-243)||(4619103-4619276)
chr5 (73-236)||(28516432-28516596)
chr5 (73-243)||(41014284-41014454)
chr5 (72-243)||(8169982-8170152)
chr5 (73-187)||(29334418-29334532)
chr5 (84-243)||(208937-209096)
chr5 (86-186)||(7097772-7097870)
chr5 (84-243)||(39301089-39301248)
chr5 (70-200)||(1405197-1405326)
chr5 (75-187)||(20135627-20135740)
chr5 (73-200)||(32703434-32703558)
chr5 (74-200)||(13801767-13801894)
chr5 (72-153)||(12477118-12477199)
chr5 (73-150)||(16957374-16957450)
chr5 (74-246)||(31694108-31694280)
chr5 (74-243)||(1565396-1565566)
chr5 (59-243)||(35710278-35710462)
chr5 (177-243)||(10634248-10634315)
chr5 (70-149)||(11657695-11657774)
chr5 (88-244)||(22187249-22187408)
chr5 (71-150)||(37225958-37226037)
chr5 (74-136)||(25622533-25622595)
chr5 (85-149)||(12006339-12006404)
chr5 (84-185)||(16880657-16880757)
chr5 (124-200)||(22907915-22907989)
chr5 (168-243)||(23974746-23974822)
chr5 (93-148)||(10306493-10306548)
chr5 (84-199)||(43574617-43574731)
chr5 (168-233)||(37024647-37024713)
chr5 (84-134)||(39801591-39801641)
chr5 (182-246)||(12622106-12622171)
chr5 (85-138)||(21784343-21784396)
chr5 (31-64)||(23129458-23129491)
chr5 (71-115)||(19093907-19093951)
chr5 (78-150)||(39079755-39079827)
[»] chr8 (44 HSPs)
chr8 (73-243)||(39460993-39461166)
chr8 (68-243)||(35261644-35261820)
chr8 (75-233)||(45071241-45071398)
chr8 (84-233)||(20284079-20284232)
chr8 (72-233)||(28817624-28817785)
chr8 (87-243)||(44781517-44781675)
chr8 (74-241)||(13160669-13160836)
chr8 (73-233)||(36720772-36720932)
chr8 (84-233)||(21070707-21070861)
chr8 (71-243)||(7136524-7136699)
chr8 (71-243)||(12670247-12670418)
chr8 (72-233)||(25250498-25250661)
chr8 (71-243)||(30454094-30454265)
chr8 (84-243)||(18164770-18164929)
chr8 (84-243)||(29521695-29521855)
chr8 (72-200)||(5135288-5135414)
chr8 (124-243)||(44742568-44742688)
chr8 (74-243)||(17823541-17823711)
chr8 (87-199)||(17250888-17251001)
chr8 (75-243)||(42083699-42083868)
chr8 (84-243)||(8483948-8484107)
chr8 (71-243)||(6760787-6760962)
chr8 (125-243)||(14018019-14018138)
chr8 (73-233)||(26954108-26954271)
chr8 (84-243)||(44530114-44530274)
chr8 (76-187)||(29877117-29877227)
chr8 (71-187)||(20869946-20870063)
chr8 (73-137)||(31457244-31457308)
chr8 (305-363)||(21664652-21664710)
chr8 (205-243)||(26457681-26457719)
chr8 (84-134)||(27507985-27508035)
chr8 (168-243)||(20869589-20869666)
chr8 (86-238)||(22598128-22598279)
chr8 (73-137)||(12625962-12626026)
chr8 (168-243)||(30962866-30962942)
chr8 (83-182)||(5689659-5689757)
chr8 (84-154)||(16013510-16013581)
chr8 (104-232)||(24365089-24365218)
chr8 (71-137)||(26102589-26102655)
chr8 (125-230)||(35105902-35106008)
chr8 (168-243)||(28407381-28407458)
chr8 (71-151)||(8897761-8897840)
chr8 (71-115)||(27468089-27468133)
chr8 (74-122)||(33867039-33867087)
[»] chr2 (46 HSPs)
chr2 (73-243)||(11514401-11514571)
chr2 (74-243)||(14530283-14530455)
chr2 (77-243)||(4516354-4516520)
chr2 (73-243)||(8455315-8455486)
chr2 (74-243)||(10543663-10543835)
chr2 (73-243)||(44643488-44643659)
chr2 (90-243)||(99281-99432)
chr2 (72-243)||(27573586-27573757)
chr2 (72-243)||(21377072-21377242)
chr2 (73-243)||(21779260-21779429)
chr2 (74-243)||(25079717-25079888)
chr2 (73-243)||(9671145-9671315)
chr2 (71-200)||(10546172-10546301)
chr2 (73-233)||(24200622-24200784)
chr2 (105-243)||(12023950-12024088)
chr2 (71-233)||(25249735-25249896)
chr2 (71-200)||(14444739-14444866)
chr2 (69-229)||(19977709-19977869)
chr2 (85-231)||(5841006-5841154)
chr2 (70-233)||(17667978-17668141)
chr2 (74-233)||(23397742-23397899)
chr2 (98-236)||(33795258-33795396)
chr2 (74-187)||(40762234-40762346)
chr2 (70-233)||(17623540-17623703)
chr2 (84-233)||(26684630-26684781)
chr2 (71-187)||(36871516-36871629)
chr2 (86-200)||(19615002-19615116)
chr2 (86-231)||(31158451-31158598)
chr2 (71-224)||(25641487-25641639)
chr2 (87-137)||(31523303-31523353)
chr2 (72-121)||(23052963-23053012)
chr2 (91-166)||(19185760-19185836)
chr2 (87-134)||(24890486-24890533)
chr2 (118-235)||(23145742-23145859)
chr2 (84-138)||(23488554-23488608)
chr2 (118-235)||(23557532-23557649)
chr2 (86-233)||(7214510-7214659)
chr2 (84-153)||(17471606-17471675)
chr2 (88-233)||(17896235-17896381)
chr2 (86-187)||(30826060-30826158)
chr2 (98-187)||(32781312-32781400)
chr2 (73-134)||(34080176-34080237)
chr2 (31-72)||(37426650-37426691)
chr2 (90-139)||(45235833-45235882)
chr2 (70-134)||(34766330-34766394)
chr2 (75-135)||(40579750-40579810)
[»] chr1 (73 HSPs)
chr1 (71-243)||(18944631-18944807)
chr1 (71-243)||(2435783-2435956)
chr1 (119-243)||(17470390-17470515)
chr1 (119-243)||(27136696-27136821)
chr1 (73-243)||(6983810-6983978)
chr1 (73-243)||(10668208-10668386)
chr1 (84-243)||(14617026-14617186)
chr1 (86-243)||(32632569-32632726)
chr1 (73-233)||(20004089-20004251)
chr1 (88-233)||(23768334-23768479)
chr1 (70-233)||(27201646-27201811)
chr1 (74-236)||(35117765-35117930)
chr1 (86-244)||(47214498-47214655)
chr1 (72-243)||(50811928-50812100)
chr1 (71-187)||(23796511-23796626)
chr1 (70-233)||(46247949-46248112)
chr1 (98-232)||(25468287-25468421)
chr1 (71-243)||(19701559-19701732)
chr1 (73-233)||(27474280-27474439)
chr1 (85-243)||(30395737-30395898)
chr1 (73-243)||(34725097-34725266)
chr1 (71-243)||(45402083-45402257)
chr1 (77-243)||(39214961-39215128)
chr1 (86-220)||(45264411-45264546)
chr1 (68-233)||(46991803-46991968)
chr1 (72-243)||(20036209-20036380)
chr1 (71-243)||(35019219-35019390)
chr1 (69-232)||(38478277-38478438)
chr1 (73-233)||(41319805-41319965)
chr1 (72-160)||(6358194-6358282)
chr1 (136-243)||(18724606-18724714)
chr1 (72-243)||(22327088-22327256)
chr1 (71-243)||(45812534-45812705)
chr1 (71-153)||(1517308-1517389)
chr1 (73-187)||(19656104-19656218)
chr1 (73-186)||(35005170-35005284)
chr1 (84-230)||(9939463-9939612)
chr1 (72-200)||(35253185-35253310)
chr1 (74-153)||(4349718-4349796)
chr1 (98-243)||(11596502-11596646)
chr1 (84-153)||(18741967-18742037)
chr1 (73-233)||(19414438-19414596)
chr1 (85-233)||(6925099-6925247)
chr1 (102-243)||(19932781-19932922)
chr1 (124-243)||(33222972-33223092)
chr1 (72-160)||(42304205-42304294)
chr1 (84-243)||(44485120-44485278)
chr1 (87-232)||(12126850-12126993)
chr1 (76-243)||(15511150-15511320)
chr1 (71-134)||(43768237-43768300)
chr1 (71-138)||(50606497-50606564)
chr1 (71-153)||(15505644-15505724)
chr1 (73-155)||(19974073-19974155)
chr1 (119-243)||(22930114-22930237)
chr1 (73-134)||(33594130-33594191)
chr1 (176-244)||(49546008-49546077)
chr1 (168-243)||(2435986-2436062)
chr1 (71-229)||(8197046-8197204)
chr1 (208-243)||(43207478-43207513)
chr1 (205-243)||(10378856-10378894)
chr1 (74-128)||(25554742-25554796)
chr1 (71-137)||(30555210-30555276)
chr1 (71-153)||(46859146-46859228)
chr1 (175-231)||(22151505-22151562)
chr1 (84-153)||(31442399-31442468)
chr1 (71-140)||(41440599-41440668)
chr1 (205-238)||(43981964-43981997)
chr1 (72-121)||(50760238-50760287)
chr1 (175-243)||(52910206-52910275)
chr1 (36-64)||(698788-698816)
chr1 (77-153)||(10378738-10378813)
chr1 (73-153)||(20999849-20999928)
chr1 (71-187)||(31382211-31382325)
[»] chr4 (72 HSPs)
chr4 (69-238)||(35567141-35567310)
chr4 (71-187)||(20639655-20639771)
chr4 (71-243)||(20908633-20908807)
chr4 (87-198)||(21489099-21489210)
chr4 (84-243)||(21646929-21647091)
chr4 (77-243)||(36589710-36589876)
chr4 (92-242)||(49938611-49938759)
chr4 (72-243)||(5648224-5648395)
chr4 (74-243)||(20224949-20225117)
chr4 (71-243)||(23501758-23501927)
chr4 (71-243)||(16408598-16408773)
chr4 (71-229)||(17043392-17043549)
chr4 (78-244)||(47441534-47441700)
chr4 (75-243)||(6430627-6430795)
chr4 (72-243)||(48598823-48598993)
chr4 (73-243)||(16911527-16911700)
chr4 (74-233)||(44363130-44363291)
chr4 (73-186)||(51865037-51865149)
chr4 (71-233)||(47528527-47528687)
chr4 (72-186)||(54175088-54175202)
chr4 (77-243)||(54966987-54967151)
chr4 (71-243)||(25343153-25343327)
chr4 (71-243)||(30639345-30639517)
chr4 (104-243)||(5306694-5306833)
chr4 (71-200)||(47443967-47444095)
chr4 (84-239)||(19027818-19027973)
chr4 (75-233)||(40915805-40915962)
chr4 (72-233)||(13256397-13256556)
chr4 (88-233)||(37494827-37494972)
chr4 (127-243)||(487187-487304)
chr4 (71-136)||(50555653-50555718)
chr4 (69-244)||(54730213-54730392)
chr4 (163-238)||(23580296-23580372)
chr4 (173-239)||(12257691-12257758)
chr4 (71-161)||(30352577-30352668)
chr4 (90-243)||(30581481-30581636)
chr4 (75-187)||(7909281-7909392)
chr4 (72-200)||(9832311-9832436)
chr4 (168-243)||(14590802-14590879)
chr4 (92-236)||(39029078-39029223)
chr4 (98-187)||(49796821-49796908)
chr4 (183-243)||(50856344-50856405)
chr4 (90-233)||(14983810-14983953)
chr4 (71-149)||(33836484-33836563)
chr4 (74-136)||(25388249-25388311)
chr4 (74-136)||(38755908-38755970)
chr4 (84-160)||(16494267-16494344)
chr4 (74-153)||(20225131-20225211)
chr4 (74-134)||(30690176-30690236)
chr4 (71-135)||(32484307-32484371)
chr4 (66-228)||(39077788-39077948)
chr4 (168-243)||(41549348-41549424)
chr4 (168-243)||(54640432-54640508)
chr4 (74-137)||(11394924-11394987)
chr4 (74-137)||(11404651-11404714)
chr4 (72-187)||(25629072-25629186)
chr4 (33-63)||(23135373-23135403)
chr4 (71-137)||(28494223-28494289)
chr4 (71-153)||(36816381-36816463)
chr4 (71-137)||(38786681-38786747)
chr4 (205-243)||(51420539-51420577)
chr4 (74-153)||(2813182-2813263)
chr4 (98-226)||(7385500-7385628)
chr4 (84-153)||(29207908-29207976)
chr4 (74-135)||(40553937-40553998)
chr4 (74-135)||(44718641-44718702)
chr4 (73-138)||(47482849-47482914)
chr4 (88-136)||(8820581-8820629)
chr4 (88-190)||(20405106-20405210)
chr4 (72-200)||(25463132-25463258)
chr4 (71-115)||(35532086-35532130)
chr4 (168-243)||(42164241-42164317)
[»] chr7 (53 HSPs)
chr7 (71-233)||(43557448-43557613)
chr7 (71-243)||(47077852-47078023)
chr7 (74-243)||(23419674-23419843)
chr7 (75-241)||(11617589-11617756)
chr7 (104-243)||(28362175-28362314)
chr7 (71-243)||(32758226-32758397)
chr7 (72-233)||(42805500-42805663)
chr7 (84-243)||(2541029-2541190)
chr7 (75-243)||(16341244-16341413)
chr7 (73-243)||(21172008-21172177)
chr7 (71-200)||(38262193-38262321)
chr7 (72-243)||(42798634-42798806)
chr7 (94-240)||(14099026-14099172)
chr7 (94-240)||(14409043-14409189)
chr7 (75-237)||(29907389-29907552)
chr7 (71-233)||(34626205-34626366)
chr7 (71-201)||(21566444-21566574)
chr7 (71-200)||(7879648-7879776)
chr7 (71-243)||(19265781-19265951)
chr7 (72-243)||(27629599-27629771)
chr7 (118-243)||(46354159-46354287)
chr7 (124-243)||(48123534-48123653)
chr7 (89-243)||(3469190-3469348)
chr7 (74-200)||(47716469-47716596)
chr7 (105-254)||(42101915-42102065)
chr7 (71-227)||(42391097-42391251)
chr7 (119-243)||(7644922-7645047)
chr7 (71-243)||(32233132-32233303)
chr7 (74-243)||(48735122-48735291)
chr7 (74-232)||(10693073-10693229)
chr7 (84-233)||(22698977-22699129)
chr7 (86-233)||(33871922-33872068)
chr7 (71-243)||(19426887-19427059)
chr7 (84-136)||(35334826-35334878)
chr7 (73-185)||(35787268-35787378)
chr7 (85-243)||(40463842-40464000)
chr7 (75-134)||(18747562-18747621)
chr7 (76-238)||(22065559-22065720)
chr7 (70-153)||(27889312-27889394)
chr7 (98-243)||(19266416-19266561)
chr7 (72-149)||(13792148-13792225)
chr7 (71-198)||(1408469-1408595)
chr7 (88-233)||(5180169-5180316)
chr7 (71-153)||(36267814-36267896)
chr7 (70-137)||(45811919-45811985)
chr7 (84-243)||(14732831-14732992)
chr7 (71-121)||(36602535-36602585)
chr7 (77-142)||(11458267-11458332)
chr7 (72-137)||(23618975-23619040)
chr7 (86-233)||(42476849-42476994)
chr7 (168-243)||(42495928-42496005)
chr7 (92-239)||(5653147-5653293)
chr7 (84-187)||(38604550-38604652)
[»] chr6 (25 HSPs)
chr6 (73-243)||(12221913-12222087)
chr6 (71-234)||(9161098-9161262)
chr6 (72-226)||(29355853-29356009)
chr6 (73-243)||(1354756-1354925)
chr6 (71-243)||(1346929-1347100)
chr6 (84-243)||(3815087-3815247)
chr6 (104-240)||(11849024-11849159)
chr6 (85-200)||(33138843-33138957)
chr6 (74-243)||(7947371-7947541)
chr6 (70-232)||(2166406-2166570)
chr6 (70-232)||(2178039-2178203)
chr6 (105-243)||(13905011-13905148)
chr6 (73-138)||(12885984-12886049)
chr6 (125-245)||(6024196-6024319)
chr6 (173-243)||(12889392-12889463)
chr6 (72-136)||(6808468-6808532)
chr6 (74-142)||(10734905-10734973)
chr6 (107-233)||(15866072-15866196)
chr6 (71-153)||(12892064-12892147)
chr6 (88-199)||(31990085-31990196)
chr6 (85-139)||(17448387-17448441)
chr6 (72-137)||(13267797-13267862)
chr6 (74-142)||(11395828-11395895)
chr6 (84-136)||(14975100-14975152)
chr6 (72-187)||(26097183-26097295)
[»] scaffold0258 (1 HSPs)
scaffold0258 (72-243)||(13022-13193)
[»] scaffold0057 (3 HSPs)
scaffold0057 (71-233)||(46807-46969)
scaffold0057 (71-243)||(24769-24937)
scaffold0057 (70-141)||(46703-46774)
[»] scaffold0168 (1 HSPs)
scaffold0168 (72-243)||(30544-30714)
[»] scaffold0049 (1 HSPs)
scaffold0049 (74-233)||(58953-59114)
[»] scaffold0187 (2 HSPs)
scaffold0187 (84-233)||(10060-10207)
scaffold0187 (84-233)||(20388-20535)
[»] scaffold0311 (1 HSPs)
scaffold0311 (87-233)||(10786-10932)
[»] scaffold0005 (1 HSPs)
scaffold0005 (168-243)||(226499-226576)
[»] scaffold0015 (1 HSPs)
scaffold0015 (73-200)||(48633-48757)
[»] scaffold0180 (1 HSPs)
scaffold0180 (71-153)||(24130-24211)
[»] scaffold0223 (1 HSPs)
scaffold0223 (86-243)||(11097-11252)


Alignment Details
Target: chr3 (Bit Score: 400; Significance: 0; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 400; E-Value: 0
Query Start/End: Original strand, 1 - 468
Target Start/End: Original strand, 829369 - 829836
Alignment:
Q  1 atttgtcccccaaatactcatataccttacttaaataagggaaatgttaacaagtgcccttaggacacttaaaaaagggcagaccggtgcactaaatctc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||    
T  829369 atttgtcccccaaatactcatataccttacttaaataagggaaatgttaacaagtgcctttaggacacttaaaaaaggacagaccggtgcactaaagctc 829468  T
Q  101 ctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgtttctagaacttgaacc 200  Q
    |||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||     
T  829469 ctgcatacgcagggttcgggaaggggtcccaccattttggtgtattgtacgcaactttactatgttctttagacaagaggttgtttctagaacttgaact 829568  T
Q  201 tatgcctttcaatcacgtgacaacaactttaccgttgcgccaaaacctccccttgctcttaggacacttgttataaattaatactacggttgaagtcaaa 300  Q
       | |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  829569 cgggtctttcaatcacgtgacaacaactttaccgttgcgccaaaactcccccttgctcttaggacacttgttataaattagtactacggttgaagtcaaa 829668  T
Q  301 atcgaacacattcttatgcaaaaagtattttaaaaacactcatacacaaaatagacacattaaacacatttcaacttctttctgatatatctgaaaattg 400  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  829669 atcgaacacattcttatgcaaaaagtattttaaaaacactcatacacaaaatagacacattaaacacatttctacttctttctgatatatctgaaaattg 829768  T
Q  401 taaaggaaggttagtaaatgttaggttccacttttggatgaaccaaaattcattctacatgtgtaaaa 468  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  829769 tgaaggaaggttagtaaatgttaggttccacttttggatgaaccaaaattcattctacatgtgtaaaa 829836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 72 - 243
Target Start/End: Original strand, 34420641 - 34420813
Alignment:
Q  72 aaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttta 171  Q
    ||||||||||| |  |||||||||| ||||  |||||||| |||  ||||| ||||||||||||||||||| || ||||||| | ||||  |||| ||||    
T  34420641 aaaaagggcagccatgtgcactaaagctcccacatacgcaaggtccgggaaggggtcccaccattttggtgtatggtacgcagccttaccctgtttttta 34420740  T
Q  172 gacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
     ||||||||||||||| || |||||||||  || ||||||| |||||||||||||||||||| ||||||||||    
T  34420741 cacaagaggctgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttactgttgcgccaa 34420813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 70 - 243
Target Start/End: Original strand, 40272808 - 40272982
Alignment:
Q  70 taaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctt 169  Q
    ||||||||||||  ||||||||||||| |||| |||||||||||||  ||||| ||||||||||| ||||||| |||||||||| | ||||  |||| ||    
T  40272808 taaaaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgttttt 40272906  T
Q  170 tagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    || |||||||| |||||| || ||||||||| ||| |||| || |||| |||||||||||||||| ||||||||||    
T  40272907 tacacaagaggttgtttccaggacttgaacccatgaccttccagtcacatgacaacaactttaccagttgcgccaa 40272982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 71 - 243
Target Start/End: Original strand, 46421031 - 46421207
Alignment:
Q  71 aaaaaagggcagaccggtgcact-aaatctcctgcatacgcagggtttgggaaagggtcccaccatt-ttggtgcattgtacgcaactttactatgttct 168  Q
    ||||||||||| ||||||||||| ||| |||| |||||||||||||  ||||| ||||||||||||| |||||| |||||||||| | ||||  |||| |    
T  46421031 aaaaaagggcaaaccggtgcacttaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttt 46421130  T
Q  169 ttagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    ||| ||||||||||||||| || |||||||||  || ||||| | |||| |||||||||||||||| ||||||||||    
T  46421131 ttacacaagaggctgtttccaggacttgaacccgtgacctttaagtcacatgacaacaactttaccagttgcgccaa 46421207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 71 - 243
Target Start/End: Complemental strand, 25944630 - 25944457
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttt 170  Q
    |||||||||||| | ||||| ||||| ||||  ||||||||||||  ||||| ||||||||||||||||||| ||||||| || | || |   ||| |||    
T  25944630 aaaaaagggcagcctggtgcgctaaagctcccacatacgcagggtcagggaaggggtcccaccattttggtgtattgtactcagccttgcccagtttttt 25944531  T
Q  171 agacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
    | || |||||| ||||| || ||||||||| ||| ||||||| |||||||||||||||||||| ||||||||||    
T  25944530 acacgagaggcggtttccaggacttgaacccatgacctttcagtcacgtgacaacaactttactgttgcgccaa 25944457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 71 - 243
Target Start/End: Complemental strand, 26573287 - 26573115
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttt 170  Q
    |||| ||||||| | ||||||||||| |||  |||||||||||||  ||||  ||||||||||| || |||| |||||||||| | ||||  |||| |||    
T  26573287 aaaagagggcagcctggtgcactaaagctcacgcatacgcagggtccgggatggggtcccaccaatt-ggtgtattgtacgcagccttaccctgtttttt 26573189  T
Q  171 agacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
    | ||| ||||||||||| || |||||||||  || ||||||| |||||||||||||||||||||||||||||||    
T  26573188 acacaggaggctgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttaccgttgcgccaa 26573115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 78 - 237
Target Start/End: Complemental strand, 19731155 - 19730996
Alignment:
Q  78 ggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaag 177  Q
    ||||| ||||||||||||| ||||||||||| ||| || ||||||||||||||||||  | |||| |||||||||||| ||||  |||| |||| |||||    
T  19731155 ggcagcccggtgcactaaagctcctgcatacacagagtctgggaaagggtcccacca-ataggtgtattgtacgcaaccttaccttgttttttacacaag 19731057  T
Q  178 aggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgttg 237  Q
    ||||| |||| || ||||| | |  || |||||||||||||||||||||| ||||||||||    
T  19731056 aggctatttccaggacttgcatccgtgacctttcaatcacgtgacaacaaatttaccgttg 19730996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 13628789 - 13628948
Alignment:
Q  73 aaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatt-ttggtgcattgtacgcaactttactatgttcttta 171  Q
    |||||||||  ||||||||||||| |||| |||||||||||||  ||||| ||||||||||||| |||||| |||||||||| | ||||  ||||  |||    
T  13628789 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttctta 13628888  T
Q  172 gacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaacttt 230  Q
     ||||||||||||||| || |||||||||  || ||||||| |||| |||||||||||||    
T  13628889 cacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttt 13628948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 93 - 243
Target Start/End: Original strand, 8247706 - 8247859
Alignment:
Q  93 taaatctcctgcatacgcagggtttgggaaagggtcccaccatt-ttggtgcattgtacgcaactttactatgttctttagacaagaggctgtttctaga 191  Q
    |||| |||| |||||||||||||  ||||| | ||||||||||| |||||| |||||||||||| ||||  |||| |||| ||||||||||||||| ||     
T  8247706 taaagctcccgcatacgcagggtccgggaaggagtcccaccattattggtgtattgtacgcaaccttaccctgttttttacacaagaggctgtttccagg 8247805  T
Q  192 acttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    |||||||||  || ||||||| |||| |||||||||||||||| ||||||||||    
T  8247806 acttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaa 8247859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 74 - 232
Target Start/End: Complemental strand, 39203671 - 39203515
Alignment:
Q  74 aaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttaga 173  Q
    ||||||||  ||||||||||||| |||| ||||| ||| |||  ||||| ||||||||||| ||||||| |||||||||||| ||||  |||  |||| |    
T  39203671 aaagggcaacccggtgcactaaagctcccgcatatgcaaggtccgggaaggggtcccacca-tttggtgtattgtacgcaaccttaccctgt--tttaca 39203575  T
Q  174 caagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttac 232  Q
    |||||||||||||| || |||||||||| || ||||||| |||| |||||||||||||||    
T  39203574 caagaggctgtttcaaggacttgaacctgtgacctttcagtcacatgacaacaactttac 39203515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 71 - 243
Target Start/End: Original strand, 13730599 - 13730774
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatt-ttggtgcattgtacgcaactttactatgttctt 169  Q
    |||||||||||  ||||||||||||| |||| ||||| || ||||  ||||| ||||||||||||| |||||| ||||||| || | ||||  |||| ||    
T  13730599 aaaaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagccttaccctgttttt 13730698  T
Q  170 tagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    || ||||||||||||||| || |||||||||  || |||| || |||| |||||||||||||||| ||||||||||    
T  13730699 tacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaa 13730774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 73 - 233
Target Start/End: Original strand, 29366719 - 29366881
Alignment:
Q  73 aaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatt-ttggtgcattgtacgcaactttactatgttcttta 171  Q
    |||||||||  || |||||||||| ||||  ||||||||||||  ||||| ||||||||||||| |||||| |||||||||| | ||||  |||| ||||    
T  29366719 aaaagggcaacccagtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttta 29366818  T
Q  172 gacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc 233  Q
     ||||||||||||||| || |||||||||  || ||||| | |||| ||||||||||||||||    
T  29366819 tacaagaggctgtttccaggacttgaacccgtgaccttttagtcacatgacaacaactttacc 29366881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 71 - 241
Target Start/End: Complemental strand, 26869866 - 26869696
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttt 170  Q
    |||||||||||  ||||||||| ||| |||| ||||||||| |||  || || ||||||||||| ||||||| |||||||||| | ||||  |||| |||    
T  26869866 aaaaaagggcaacccggtgcaccaaagctcccgcatacgcatggtccggcaaggggtcccacca-tttggtgtattgtacgcagccttaccctgtt-ttt 26869769  T
Q  171 agacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgcc 241  Q
    | || |||||||||||| || |||||||||| || ||||||| |||| |||||||||||||||| ||||||||    
T  26869768 acaccagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 26869696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 72 - 243
Target Start/End: Original strand, 53996563 - 53996735
Alignment:
Q  72 aaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttta 171  Q
    ||||||||||| ||||||||||||| ||||  ||||||||| ||  ||||| ||||||||||||||||||| |||||| ||| | ||||  |||| ||||    
T  53996563 aaaaagggcagcccggtgcactaaagctcccacatacgcagtgtcagggaaggggtcccaccattttggtgtattgtaagcagccttaccctgtttttta 53996662  T
Q  172 gacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
     |||||||| |||||| |  ||||||||   || ||||||| |||  ||||||||| |||||||| |||||||    
T  53996663 cacaagaggttgtttccacgacttgaacacgtgacctttcagtcaaatgacaacaaatttaccgtagcgccaa 53996735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 75 - 243
Target Start/End: Complemental strand, 22609921 - 22609754
Alignment:
Q  75 aagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagac 174  Q
    |||||||  |||||||||| || |||| ||||||||| |||  ||||| |||||||||||||| |||| |||||||||| | ||||  |||| |||| ||    
T  22609921 aagggcaacccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccaccattt-ggtgtattgtacgcagccttaccctgtt-tttacac 22609824  T
Q  175 aagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
    ||||||||||||| |  |||||||||  |  |||| || |||| ||||||||||||||||||||||||||    
T  22609823 aagaggctgtttccaagacttgaacccgttaccttacagtcacatgacaacaactttaccgttgcgccaa 22609754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 72 - 230
Target Start/End: Original strand, 5173717 - 5173876
Alignment:
Q  72 aaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccacca-ttttggtgcattgtacgcaactttactatgttcttt 170  Q
    ||||||||||  ||||||||||||| |||| ||||||||| |||  ||||| ||| ||||||| |||||||| |||| | ||||| ||||| |||| |||    
T  5173717 aaaaagggcaacccggtgcactaaagctcccgcatacgcaaggtccgggaaggggccccaccatttttggtgtattgcatgcaaccttactttgtt-ttt 5173815  T
Q  171 agacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaacttt 230  Q
    | |||||||| |||||| || |||||||||  || ||||||| |||| |||||||||||||    
T  5173816 acacaagaggttgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttt 5173876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 168 - 243
Target Start/End: Original strand, 45620922 - 45620998
Alignment:
Q  168 tttagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
    |||| ||||||||||||||| ||||||||||||  || ||||||| |||||||||||||||||||||||||||||||    
T  45620922 tttacacaagaggctgtttccagaacttgaacccgtgacctttcagtcacgtgacaacaactttaccgttgcgccaa 45620998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 84 - 200
Target Start/End: Complemental strand, 14987106 - 14986989
Alignment:
Q  84 ccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatt-ttggtgcattgtacgcaactttactatgttctttagacaagaggct 182  Q
    ||||||||||||| |||| ||||| ||| |||  ||||| ||||||||||||| |||||| |||||||||| | ||||  |||| |||| ||||||||||    
T  14987106 ccggtgcactaaagctcccgcatatgcaaggtccgggaatgggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggct 14987007  T
Q  183 gtttctagaacttgaacc 200  Q
    ||||| || |||||||||    
T  14987006 gtttccaggacttgaacc 14986989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 74 - 186
Target Start/End: Original strand, 45786214 - 45786327
Alignment:
Q  74 aaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccacca-ttttggtgcattgtacgcaactttactatgttctttag 172  Q
    ||||||||  ||||||||||||| |||| |||| ||||||||  ||||| ||||||||||| |||||||| |||||||||| | ||||  |||| ||||     
T  45786214 aaagggcaacccggtgcactaaagctccagcattcgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttac 45786313  T
Q  173 acaagaggctgttt 186  Q
    ||||||||||||||    
T  45786314 acaagaggctgttt 45786327  T

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Target: chr3; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 70 - 218
Target Start/End: Original strand, 54374341 - 54374490
Alignment:
Q  70 taaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctt 169  Q
    ||||||| ||||| | |||| |||||| |||| ||||| |||||||  ||||| ||||||||||||||||||| |||||||||| | ||||  | || ||    
T  54374341 taaaaaatggcagcctggtgaactaaagctcccgcatatgcagggtccgggaaggggtcccaccattttggtggattgtacgcagccttaccctattttt 54374440  T
Q  170 tagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgt 218  Q
    || |||||||| |||||| |  |||||||||| || ||||||| ||||||    
T  54374441 tacacaagaggttgtttccaagacttgaacctgtgacctttcagtcacgt 54374490  T

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Target: chr3; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 73 - 243
Target Start/End: Original strand, 12914034 - 12914205
Alignment:
Q  73 aaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttag 172  Q
    |||||||||  |||||||| | || |||| ||||| ||||||| |||||| ||||| |||||||| |||| |||||||||  | ||||  |||| ||||     
T  12914034 aaaagggcaacccggtgcattgaagctcccgcatatgcagggtctgggaaggggtctcaccattt-ggtgtattgtacgccgccttaccctgttttttac 12914132  T
Q  173 acaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    ||||||||||||||| || |||||||| | || ||||||  |||| | |||||||||||||| ||||||||||    
T  12914133 acaagaggctgtttccaggacttgaacttgtgacctttcggtcacattacaacaactttaccagttgcgccaa 12914205  T

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Target: chr3; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 72 - 187
Target Start/End: Complemental strand, 54484850 - 54484735
Alignment:
Q  72 aaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatg-ttcttt 170  Q
    ||||||||||  ||||||||||||| |||| |||||||||||||  ||||| ||||||||||| ||||||| |||||||||| | ||||  || || |||    
T  54484850 aaaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca-tttggtgtattgtacgcagccttaccttgttttttt 54484752  T
Q  171 agacaagaggctgtttc 187  Q
    | |||||||||||||||    
T  54484751 acacaagaggctgtttc 54484735  T

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Target: chr3; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 72 - 200
Target Start/End: Complemental strand, 516571 - 516441
Alignment:
Q  72 aaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccacca--ttttggtgcattgtacgcaactttactatgttctt 169  Q
    ||||||||||  ||||||||||||| |||| |||||||||||||  ||||| ||||||| |||  |||||||  ||||| |||| | ||||  |||| ||    
T  516571 aaaaagggcaacccggtgcactaaagctcccgcatacgcagggtcggggaaggggtcccgccattttttggtttattgtgcgcagccttaccctgttttt 516472  T
Q  170 tagacaagaggctgtttctagaacttgaacc 200  Q
    || ||||||||||||||| || |||||||||    
T  516471 tacacaagaggctgtttccaggacttgaacc 516441  T

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Target: chr3; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 91 - 232
Target Start/End: Complemental strand, 9607345 - 9607202
Alignment:
Q  91 actaaatctcctgcatacgcagggtttgggaaagggtcccaccatt-ttggtgcattgtacgcaactttactatgttctttagacaagaggctgtttcta 189  Q
    |||||| |||| ||||| || |||| |||||| |||||||| |||| |||||| ||| |||||| | ||||  |||| ||||  |||||||||||||| |    
T  9607345 actaaagctcccgcatatgcggggtctgggaaggggtcccaacattattggtgtattctacgcagccttaccctgttttttacgcaagaggctgtttcca 9607246  T
Q  190 gaacttgaacctatg-cctttcaatcacgtgacaacaactttac 232  Q
    | ||||||||| ||| ||||||| |||| |||||||||||||||    
T  9607245 ggacttgaaccgatgacctttcagtcacatgacaacaactttac 9607202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 69 - 187
Target Start/End: Original strand, 49013468 - 49013587
Alignment:
Q  69 ttaaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatt-ttggtgcattgtacgcaactttactatgttc 167  Q
    |||||||||||||  ||||||||||||| |||| || || || ||||  ||||| ||||||||||||| |||||| |||||||||| | ||||  ||||     
T  49013468 ttaaaaaagggcaacccggtgcactaaagctcccgcgtatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttt 49013567  T
Q  168 tttagacaagaggctgtttc 187  Q
    |||| |||||||||||||||    
T  49013568 tttacacaagaggctgtttc 49013587  T

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Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 72 - 243
Target Start/End: Complemental strand, 1217247 - 1217077
Alignment:
Q  72 aaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttta 171  Q
    ||||||||||  ||||||||||| | |||| ||||| |||||||  ||||| ||||||| ||| ||||||| |||||||||| | ||||  |||  ||||    
T  1217247 aaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccgcca-tttggtgtattgtacgcagccttaccctgt--ttta 1217151  T
Q  172 gacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
     ||||||||||||||| || |||||||||  || ||||||| | || |||| ||||||||||| ||||||||||    
T  1217150 cacaagaggctgtttccaggacttgaacccgtgacctttcagtgacatgactacaactttaccagttgcgccaa 1217077  T

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Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 233
Target Start/End: Original strand, 6411833 - 6411980
Alignment:
Q  85 cggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgt 184  Q
    |||||||||||| |||| ||||||||| ||| |||||| |||||||| || ||||||| |||||||||| | ||||  |||| |||| ||||||||||||    
T  6411833 cggtgcactaaagctcccgcatacgcaaggtctgggaaggggtcccatca-tttggtgtattgtacgcagccttaccctgtt-tttacacaagaggctgt 6411930  T
Q  185 ttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc 233  Q
    ||  |  ||||||||| ||| ||| ||| | || ||||||||||||||||    
T  6411931 ttacaagacttgaacccatgacctatcagttacatgacaacaactttacc 6411980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 78 - 234
Target Start/End: Complemental strand, 19751731 - 19751575
Alignment:
Q  78 ggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaag 177  Q
    ||||| ||||||||||||| ||| ||||||| ||  || ||||||||||||||||||  | |||| |||||||||||| ||||  || | |||| |||||    
T  19751731 ggcagcccggtgcactaaagctcatgcatacacaaagtctgggaaagggtcccacca-ataggtgtattgtacgcaaccttaccttgatttttacacaag 19751633  T
Q  178 aggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccg 234  Q
    ||||| |||| || ||||| | |  || ||||||||||||||||||| || |||||||    
T  19751632 aggctatttccaggacttgcatccgtgacctttcaatcacgtgacaaaaaatttaccg 19751575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 86 - 200
Target Start/End: Original strand, 10795435 - 10795550
Alignment:
Q  86 ggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatttt-ggtgcattgtacgcaactttactatgttctttagacaagaggctgt 184  Q
    |||||||| || |||| |||||||||||||   |||| ||||||||||||||| |||| |||||||||| | ||||  |||  |||| ||||||||||||    
T  10795435 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgt 10795534  T
Q  185 ttctagaacttgaacc 200  Q
    ||| || |||||||||    
T  10795535 ttccaggacttgaacc 10795550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 71 - 243
Target Start/End: Original strand, 52926216 - 52926380
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttt 170  Q
    |||||||||||  ||||||| ||||| |||| |||||||||||||  ||||| | ||||||||| ||||||| |||||||||| | ||||         |    
T  52926216 aaaaaagggcaacccggtgcgctaaagctcccgcatacgcagggtccgggaaggtgtcccacca-tttggtgtattgtacgcagccttac---------t 52926305  T
Q  171 agacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    | ||||||||||||||| || |||||||||  || |||| || |||| |||||||||||||||| ||||||||||    
T  52926306 acacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaa 52926380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 72 - 153
Target Start/End: Original strand, 34771362 - 34771442
Alignment:
Q  72 aaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgca 153  Q
    ||||||||||| ||||||||||| | |||| ||||| |||||||  ||||| ||||||||||| ||||||| ||||||||||    
T  34771362 aaaaagggcagcccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca-tttggtgtattgtacgca 34771442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 73 - 243
Target Start/End: Complemental strand, 16735598 - 16735428
Alignment:
Q  73 aaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttag 172  Q
    |||||||||  || ||||||| || || | |||||||||| ||  ||||| ||||||||||| ||||||| |||||||||| | ||||  |||| |||      
T  16735598 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgtt-tttct 16735501  T
Q  173 acaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    ||||||||||||||| || |||||||||  || | || || |||| |||||||||||||||| ||||||||||    
T  16735500 acaagaggctgtttcgaggacttgaacccgtgacgttacagtcacatgacaacaactttaccagttgcgccaa 16735428  T

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Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 73 - 153
Target Start/End: Original strand, 25517169 - 25517248
Alignment:
Q  73 aaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgca 153  Q
    |||||||||  ||||||||||||| |||| ||||||||||| |  ||||| ||||||||||||||| ||| ||||||||||    
T  25517169 aaaagggcaacccggtgcactaaagctccagcatacgcaggatccgggaaggggtcccaccatttt-gtgtattgtacgca 25517248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 72 - 243
Target Start/End: Original strand, 44403553 - 44403725
Alignment:
Q  72 aaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttta 171  Q
    ||||| ||||| ||||||||||||| || | ||||||| |||||  ||||| ||||||||||||||||  | ||| | |||| | ||||  |||  ||||    
T  44403553 aaaaaaggcagcccggtgcactaaagcttcagcatacgtagggtccgggaaggggtcccaccattttgtggtattctccgcagccttaccttgtctttta 44403652  T
Q  172 gacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
     |||||||||| || | || |||| ||||| || ||||| |  |||||||||| |||||||||||||| ||||    
T  44403653 cacaagaggctattcccaggactttaacctgtgaccttttagccacgtgacaataactttaccgttgcaccaa 44403725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 74 - 200
Target Start/End: Complemental strand, 31593004 - 31592881
Alignment:
Q  74 aaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttaga 173  Q
    ||||||||  ||||||||||| | |||| ||||| |||||||  ||||| | ||||||||| ||||||| |||||||||| | ||||  |||  |||| |    
T  31593004 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggagtcccacca-tttggtgtattgtacgcagccttaccctgt--tttaca 31592908  T
Q  174 caagaggctgtttctagaacttgaacc 200  Q
    |||||||||||||| || |||||||||    
T  31592907 caagaggctgtttccaggacttgaacc 31592881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 168 - 243
Target Start/End: Original strand, 10870044 - 10870121
Alignment:
Q  168 tttagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    |||| ||||||||||||||| || |||||||||  || ||||||| |||| |||||||||||||||| ||||||||||    
T  10870044 tttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaa 10870121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 75 - 233
Target Start/End: Original strand, 22122918 - 22123074
Alignment:
Q  75 aagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagac 174  Q
    |||||||  ||||||||||| | |||  ||||| |||||||  ||||| ||||||||||| ||||||| |||||||||| | ||||  |||  |||| ||    
T  22122918 aagggcaacccggtgcactagagctctcgcatatgcagggtccgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgt--tttacac 22123014  T
Q  175 aagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc 233  Q
    ||||| ||||||| || |||||||||   | ||||||| |||| ||||||||| ||||||    
T  22123015 aagagactgtttccaggacttgaacccgcgacctttcagtcacatgacaacaaatttacc 22123074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 69 - 137
Target Start/End: Complemental strand, 24577997 - 24577929
Alignment:
Q  69 ttaaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattt 137  Q
    |||||||||||||  ||||||||||| | |||| | ||| ||||||| ||||||||| |||||||||||    
T  24577997 ttaaaaaagggcaatccggtgcactagagctcccgtatatgcagggtctgggaaaggatcccaccattt 24577929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 198
Target Start/End: Complemental strand, 7943134 - 7943024
Alignment:
Q  87 gtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgttt 186  Q
    |||||||||| |||| ||||||||| ||| ||| || || |||||||| |||| || ||||||||||   ||||  |||| ||||||||||| |||||||    
T  7943134 gtgcactaaagctcccgcatacgcatggtctggaaagggatcccacca-tttgatgtattgtacgcagtcttaccctgttttttagacaagatgctgttt 7943036  T
Q  187 ctagaacttgaa 198  Q
    | || |||||||    
T  7943035 ccaggacttgaa 7943024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 153
Target Start/End: Complemental strand, 15797381 - 15797299
Alignment:
Q  70 taaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgca 153  Q
    ||||||||||||  ||||||||||| | ||||  |||| |||||||  ||||| ||||||||||| ||||||| ||||||||||    
T  15797381 taaaaaagggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccacca-tttggtgtattgtacgca 15797299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 84 - 153
Target Start/End: Original strand, 353359 - 353429
Alignment:
Q  84 ccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatt-ttggtgcattgtacgca 153  Q
    ||||||||||||| |||| ||||| || ||||  ||||| ||||||||||||| |||||| ||||||||||    
T  353359 ccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgca 353429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 115
Target Start/End: Original strand, 4495671 - 4495717
Alignment:
Q  69 ttaaaaaagggcagaccggtgcactaaatctcctgcatacgcagggt 115  Q
    |||||||||||||  ||||||||||||| |||| |||||||||||||    
T  4495671 ttaaaaaagggcaacccggtgcactaaagctcccgcatacgcagggt 4495717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 75 - 153
Target Start/End: Complemental strand, 16130432 - 16130354
Alignment:
Q  75 aagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgca 153  Q
    |||||||| ||  ||||||||| ||||||  |||||| ||| | ||| |||||||||||||||||||| ||||| ||||    
T  16130432 aagggcagcccaatgcactaaagctcctgtgtacgcaaggtctaggacagggtcccaccattttggtgtattgttcgca 16130354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 137
Target Start/End: Original strand, 24851298 - 24851364
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattt 137  Q
    |||||||||||  ||||||||||||| |||| ||||| ||||| |  ||||| ||||||||||||||    
T  24851298 aaaaaagggcaacccggtgcactaaagctcccgcatatgcaggatccgggaaggggtcccaccattt 24851364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 104 - 237
Target Start/End: Original strand, 30928177 - 30928310
Alignment:
Q  104 catacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgtttctagaacttgaacctat 203  Q
    |||| |||||||  ||||| ||||||| ||| || |||| ||| ||| |||| ||||  |||| |||| ||||||||||||||| || |||||||||  |    
T  30928177 catatgcagggtccgggaaggggtcccgccaatt-ggtgtattttacacaaccttaccttgttttttacacaagaggctgtttccaggacttgaacccgt 30928275  T
Q  204 g-cctttcaatcacgtgacaacaactttaccgttg 237  Q
    | ||||||| |||| |||||| ||||| |||||||    
T  30928276 gacctttcagtcacatgacaagaacttgaccgttg 30928310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 75 - 200
Target Start/End: Original strand, 45139479 - 45139603
Alignment:
Q  75 aagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccacca-ttttggtgcattgtacgcaactttactatgttctttaga 173  Q
    |||||||| ||||||||| || | ||| ||||||||||| | |||||| ||||||||||| |||||||| |||||| ||| | ||||  |||  |||| |    
T  45139479 aagggcagcccggtgcacaaagt-tcccgcatacgcagg-tctgggaaggggtcccaccatttttggtgtattgtatgcagccttaccctgtgttttaca 45139576  T
Q  174 caagaggctgtttctagaacttgaacc 200  Q
    ||||||| |||||| | ||||||||||    
T  45139577 caagaggttgtttccaaaacttgaacc 45139603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 243
Target Start/End: Original strand, 45948847 - 45949010
Alignment:
Q  83 accggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggct 182  Q
    |||||||||||||| |||| |||||||||||||  | ||| |||||||||||  |||||| |||||| ||| | ||||  | || |||| |||||||| |    
T  45948847 accggtgcactaaagctcccgcatacgcagggtccgagaaggggtcccacca-attggtgtattgtatgcagccttaccctattttttacacaagaggtt 45948945  T
Q  183 gtttctagaacttgaacctatg-cct---ttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
    ||||| || | |||||||  || |||   |||| |||| ||| |||||||| |||||||||||||    
T  45948946 gtttccaggaattgaacccgtgaccttccttcagtcacatgaaaacaacttcaccgttgcgccaa 45949010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 1121254 - 1121303
Alignment:
Q  104 catacgcagggtttgggaaagggtcccaccattttggtgcattgtacgca 153  Q
    |||||||||||| || |||||| |||| ||||||||||| ||||||||||    
T  1121254 catacgcagggtctgagaaaggctcccgccattttggtgtattgtacgca 1121303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 116
Target Start/End: Complemental strand, 40390401 - 40390356
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtt 116  Q
    |||||||||||  ||||||||||||| |||| ||||||||||||||    
T  40390401 aaaaaagggcaacccggtgcactaaagctcccgcatacgcagggtt 40390356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 103 - 183
Target Start/End: Complemental strand, 9276391 - 9276313
Alignment:
Q  103 gcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctg 183  Q
    |||||||||||||  |||||||||||| ||||||| |||| |||||||||| | ||||  |||| |||| |||||||||||    
T  9276391 gcatacgcagggtccgggaaagggtcc-accattt-ggtgtattgtacgcagccttaccctgttttttacacaagaggctg 9276313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 137
Target Start/End: Complemental strand, 24578087 - 24578019
Alignment:
Q  69 ttaaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattt 137  Q
    |||||||||||||  ||||||||||| |  ||| ||||| | ||||| |||||||| ||||||||||||    
T  24578087 ttaaaaaagggcaacccggtgcactagagttcccgcatatgtagggtctgggaaagagtcccaccattt 24578019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 115
Target Start/End: Original strand, 43956469 - 43956513
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggt 115  Q
    |||||||||||| ||||||||||||| |||| |||||||| ||||    
T  43956469 aaaaaagggcagcccggtgcactaaagctcccgcatacgctgggt 43956513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 115
Target Start/End: Complemental strand, 47624259 - 47624215
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggt 115  Q
    |||||||||||  ||||||||||||| |||| |||||||||||||    
T  47624259 aaaaaagggcaacccggtgcactaaagctcccgcatacgcagggt 47624215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 2e-31; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 73 - 243
Target Start/End: Complemental strand, 38879719 - 38879546
Alignment:
Q  73 aaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatt-ttggtgcattgtacgcaactttactatgttcttta 171  Q
    |||||||||  ||||||||||||| |||| |||||||||||||  ||||| ||||||||||||| |||||| |||||||||| | ||||  |||| ||||    
T  38879719 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttta 38879620  T
Q  172 gacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
     ||||||||||||||| || |||||||||  || ||||||| |||| |||||||||||||||| ||||||||||    
T  38879619 tacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaa 38879546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 71 - 243
Target Start/End: Complemental strand, 24449028 - 24448855
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttt 170  Q
    |||||||||||  ||||||||||||| ||||||||||||||||||  ||||| ||||||||||| ||||||| |||||||||| | ||||  | || |||    
T  24449028 aaaaaagggcaacccggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctatttttt 24448930  T
Q  171 agacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    | |||| |||||||||| || |||||||||  || |||| || |||| |||||||||||||||| ||||||||||    
T  24448929 acacaaaaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaa 24448855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 88 - 233
Target Start/End: Complemental strand, 27328875 - 27328728
Alignment:
Q  88 tgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatt-ttggtgcattgtacgcaactttactatgttctttagacaagaggctgttt 186  Q
    |||| |||| |||| |||||||||||||| ||||| ||||||||||||| |||||| |||||||||| | ||||  |||| |||| ||||||| ||||||    
T  27328875 tgcattaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagagactgttt 27328776  T
Q  187 ctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc 233  Q
    | || |||||||||| || ||||||| |||| ||||||||||||||||    
T  27328775 ccaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 27328728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 71 - 243
Target Start/End: Original strand, 19142940 - 19143111
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttt 170  Q
    |||||||||||| || ||||||||||||||| ||||||||| |||  ||||| ||||||||||| ||||||| | |||||||| | ||||  |||| |||    
T  19142940 aaaaaagggcaggccagtgcactaaatctcccgcatacgcatggtccgggaaggggtcccacca-tttggtgtactgtacgcagccttaccctgtt-ttt 19143037  T
Q  171 agacaagaggctgtttctagaacttgaacctat-gcctttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
    | |||||||| |||||| || |||||||||| | || ||| | |||||||||||||| |||||| |||||||||    
T  19143038 acacaagaggttgtttccaggacttgaacctgtggcattttagtcacgtgacaacaattttaccattgcgccaa 19143111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 74 - 159
Target Start/End: Original strand, 12575660 - 12575745
Alignment:
Q  74 aaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaacttta 159  Q
    ||||||||| ||||||||| ||| ||||||||||||||||||   |||| ||||||||||||||||||| ||||||||||||||||    
T  12575660 aaagggcagcccggtgcaccaaagctcctgcatacgcagggtccaggaaggggtcccaccattttggtgtattgtacgcaacttta 12575745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 72 - 243
Target Start/End: Complemental strand, 43334341 - 43334167
Alignment:
Q  72 aaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatttt-ggtgcattgtacgcaactttactatgttcttt 170  Q
    ||||||||||  ||||||||||||| |||| |||| ||||||||  ||||| ||||||||||||||| |||| |||||||||| | ||||  |||| |||    
T  43334341 aaaaagggcaacccggtgcactaaagctcccgcat-cgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttttt 43334243  T
Q  171 -agacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
     | ||| ||||||||||| || |||||||||  || ||||||| |||| |||||||||||||||| ||||||||||    
T  43334242 tacacaggaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaa 43334167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 104 - 229
Target Start/End: Original strand, 34074592 - 34074717
Alignment:
Q  104 catacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgtttctagaacttgaacctat 203  Q
    ||||||||||||||||||| ||| ||  |||||| |||| |||| ||||||| ||||| |||| |||| |||||||||||||||||| |||||||| | |    
T  34074592 catacgcagggtttgggaaggggccctgccattt-ggtgtattgaacgcaaccttactgtgttttttacacaagaggctgtttctaggacttgaacttgt 34074690  T
Q  204 g-cctttcaatcacgtgacaacaactt 229  Q
    | ||||||| ||| |||||||||||||    
T  34074691 gacctttcagtcatgtgacaacaactt 34074717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 73 - 243
Target Start/End: Original strand, 4619103 - 4619276
Alignment:
Q  73 aaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatt-ttggtgcattgtacgcaactttactatgttcttta 171  Q
    |||||||||  ||||||||||||| |||  ||||| || ||||  ||||| ||||||||||||| |||||| |||||||||| | ||||  |||| ||||    
T  4619103 aaaagggcaacccggtgcactaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttta 4619202  T
Q  172 gacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
     |||||||||| |||| || |||||||||  || |||| || |||| |||||||||||||||| ||||||||||    
T  4619203 cacaagaggctatttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaa 4619276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 73 - 236
Target Start/End: Original strand, 28516432 - 28516596
Alignment:
Q  73 aaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttag 172  Q
    |||||||||  | ||| ||||||| ||||||||| |||||||| |||||| |||||||||||||||| || |||||||||| |  ||   |||| ||||     
T  28516432 aaaagggcaacctggtccactaaagctcctgcatgcgcagggtctgggaatgggtcccaccattttgatgtattgtacgcagccctagcctgttttttac 28516531  T
Q  173 acaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgtt 236  Q
    |||||||| |||||| |  |||||||||  || |||||||  ||| |||||||||||||||||||    
T  28516532 acaagaggatgtttccaagacttgaacccgtgacctttcagccacctgacaacaactttaccgtt 28516596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 73 - 243
Target Start/End: Complemental strand, 41014454 - 41014284
Alignment:
Q  73 aaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttag 172  Q
    |||||||||  ||||||||||||| |||| ||||| || ||||   |||| ||||||||||| ||||||| |||||||||| | ||||  |||| ||||     
T  41014454 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtccaggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgtt-tttac 41014357  T
Q  173 acaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    ||||||||||||||| || |||||||||  || |||| || |||| |||||||||||||||| ||||||||||    
T  41014356 acaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaa 41014284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 72 - 243
Target Start/End: Original strand, 8169982 - 8170152
Alignment:
Q  72 aaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttta 171  Q
    ||||||||||  |||||||||| || |||| ||||| |||||||  ||||| ||||||||||| ||||||| |||||||||| | ||||  |||  ||||    
T  8169982 aaaaagggcaacccggtgcactgaaactcccgcatatgcagggtccgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgt--ttta 8170078  T
Q  172 gacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
     |||| |||||||||| || |||||||||  || ||||||  |||| |||||||||||||||| ||||||||||    
T  8170079 cacaaaaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttaccagttgcgccaa 8170152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 73 - 187
Target Start/End: Complemental strand, 29334532 - 29334418
Alignment:
Q  73 aaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttag 172  Q
    |||||||||| |||||||| ||||  |||  ||||||||||||  ||||| ||||||||||||| ||||| |||||||||| | ||||  |||| ||||     
T  29334532 aaaagggcagcccggtgcattaaagatcccacatacgcagggtccgggaatgggtcccaccattctggtgtattgtacgcagccttaccttgttttttac 29334433  T
Q  173 acaagaggctgtttc 187  Q
    |||||||||||||||    
T  29334432 acaagaggctgtttc 29334418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 84 - 243
Target Start/End: Original strand, 208937 - 209096
Alignment:
Q  84 ccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctg 183  Q
    ||||||||||||| ||| ||||||| ||||||   |||| ||||||||||||||||||| |||| | ||| | ||||  |||| |||| |||||||| ||    
T  208937 ccggtgcactaaagctcttgcatacccagggtccaggaaggggtcccaccattttggtgtattgaatgcagccttaccctgtt-tttacacaagaggttg 209035  T
Q  184 tttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
    || | || |||||||| | || ||||| | |||| ||||||||||||||||| ||||||||    
T  209036 ttgccaggacttgaacttgtgaccttttagtcacatgacaacaactttaccgctgcgccaa 209096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 86 - 186
Target Start/End: Original strand, 7097772 - 7097870
Alignment:
Q  86 ggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgtt 185  Q
    ||||||||||| |||| |||||||||||||| ||||| ||||| ||||| ||||||| |||||||||||| ||||  |||| |||| |||||||||||||    
T  7097772 ggtgcactaaagctcccgcatacgcagggttcgggaaggggtctcacca-tttggtgtattgtacgcaaccttaccctgtt-tttacacaagaggctgtt 7097869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 84 - 243
Target Start/End: Complemental strand, 39301248 - 39301089
Alignment:
Q  84 ccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctg 183  Q
    ||||||||||||| ||||  |||||| |||||  ||||| |||||||||| |||||||||||| |||||| | ||||  |||| | || |||||||| ||    
T  39301248 ccggtgcactaaa-ctcccacatacggagggtccgggaaggggtcccacctttttggtgcattatacgcatccttaccctgttttatacacaagaggttg 39301150  T
Q  184 tttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
    || | |  |||||||||  || ||||||| | || ||||||||||||||||||||||||||    
T  39301149 ttcccaagacttgaacccgtgacctttcagtaacatgacaacaactttaccgttgcgccaa 39301089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 70 - 200
Target Start/End: Complemental strand, 1405326 - 1405197
Alignment:
Q  70 taaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctt 169  Q
    ||||||||||||  |||||| |||| | |||| ||||| ||||||||  |||||||||||||||| ||||||| |||||||||||  ||||| | || ||    
T  1405326 taaaaaagggcaatccggtgtactagagctcccgcatatgcagggttcaggaaagggtcccacca-tttggtgtattgtacgcaaacttactctattttt 1405228  T
Q  170 tagacaagaggctgtttctagaacttgaacc 200  Q
    || | |||||| |||||| || |||||||||    
T  1405227 tatataagaggttgtttccaggacttgaacc 1405197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 75 - 187
Target Start/End: Complemental strand, 20135740 - 20135627
Alignment:
Q  75 aagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatt-ttggtgcattgtacgcaactttactatgttctttaga 173  Q
    |||||||  |||||||||| || |||||||||| || ||||  ||||| ||||||||||||| |||||| |||||||||| | ||||  |||| |||| |    
T  20135740 aagggcaacccggtgcactgaagctcctgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccttgttttttaca 20135641  T
Q  174 caagaggctgtttc 187  Q
    ||||||||||||||    
T  20135640 caagaggctgtttc 20135627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 73 - 200
Target Start/End: Complemental strand, 32703558 - 32703434
Alignment:
Q  73 aaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttag 172  Q
    |||||||||  ||||||||||| | |||| ||||| |||||||  ||||| ||||||||||| ||||||| |||||||||| | ||||  |||  ||||     
T  32703558 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgt--tttac 32703462  T
Q  173 acaagaggctgtttctagaacttgaacc 200  Q
    ||||||||||||||| || |||||||||    
T  32703461 acaagaggctgtttccaggacttgaacc 32703434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 74 - 200
Target Start/End: Original strand, 13801767 - 13801894
Alignment:
Q  74 aaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatt-ttggtgcattgtacgcaactttactatgttctttag 172  Q
    ||||||||  ||||||||||||| |||  ||||| || ||||  ||||| ||||||||||||| |||||| |||||||||| | ||||  |||| ||||     
T  13801767 aaagggcaacccggtgcactaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttac 13801866  T
Q  173 acaagaggctgtttctagaacttgaacc 200  Q
    ||||||||||| ||| || |||||||||    
T  13801867 acaagaggctgcttccaggacttgaacc 13801894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 72 - 153
Target Start/End: Original strand, 12477118 - 12477199
Alignment:
Q  72 aaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgca 153  Q
    |||||||||||   ||||||||||| ||| |||||||||||  |  ||||| ||||||||||||||||||| ||||||||||    
T  12477118 aaaaagggcagttgggtgcactaaagctcttgcatacgcagaatccgggaaggggtcccaccattttggtgtattgtacgca 12477199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 73 - 150
Target Start/End: Complemental strand, 16957450 - 16957374
Alignment:
Q  73 aaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtac 150  Q
    |||||||||  ||||||||||||| |||| |||||||||||||  ||||| ||||||||||| ||||||| |||||||    
T  16957450 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca-tttggtgtattgtac 16957374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 74 - 246
Target Start/End: Original strand, 31694108 - 31694280
Alignment:
Q  74 aaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttaga 173  Q
    ||||||||| | |||||||||||||||| ||||||||| ||| |||||| | |||||| || |  |||| |||||| ||| |||||   | || |||| |    
T  31694108 aaagggcagtctggtgcactaaatctcccgcatacgcaaggtctgggaaggagtcccatcaata-ggtgtattgtatgcagctttagcctattttttaca 31694206  T
Q  174 caagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgttgcgccaaaac 246  Q
    | || | || |||  |  ||||||||||||| ||| ||| |||||||||||||||||||| |||||||||||||    
T  31694207 cgagtgacttttttcaagacttgaacctatgacctatcagtcacgtgacaacaactttactgttgcgccaaaac 31694280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 74 - 243
Target Start/End: Complemental strand, 1565566 - 1565396
Alignment:
Q  74 aaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttt-ag 172  Q
    ||||||||  ||||||||||||  ||||  |||| |||||||  ||||| ||||||| |||||| ||||||||||||||| | ||| |||||| ||| |     
T  1565566 aaagggcaacccggtgcactaag-ctcccacatatgcagggtccgggaaggggtcccgccattt-ggtgcattgtacgcagccttaatatgtttttttac 1565469  T
Q  173 acaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
     ||||||| |||||| || |||||||||   | ||||||| |||| |||||||||||||||| ||||||||||    
T  1565468 tcaagaggttgtttccaggacttgaacccgcgacctttcagtcacatgacaacaactttaccagttgcgccaa 1565396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 243
Target Start/End: Complemental strand, 35710462 - 35710278
Alignment:
Q  59 cttaggacactt-aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactt 157  Q
    ||||||| |||| |||||||||||  ||||||||||| | |||| ||||| ||| | |  ||||| |||||||||||||| |||| |||| ||||| | |    
T  35710462 cttaggaaacttcaaaaaagggcaacccggtgcactagagctcccgcatatgcatgttccgggaaggggtcccaccattt-ggtgtattgaacgcagcct 35710364  T
Q  158 tactatgttctttagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    |||  | ||  ||| ||||||||||||||| || |||||||||  || ||||||| | || |||||||||||||||| ||||||||||    
T  35710363 taccctatt--ttacacaagaggctgtttccaggacttgaacccgtgacctttcagttacatgacaacaactttaccagttgcgccaa 35710278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 10634248 - 10634315
Alignment:
Q  177 gaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
    |||| ||||||||| ||||||||| ||| ||||||| |||| |||||||||||| |||||||||||||    
T  10634248 gaggttgtttctaggacttgaacccatgacctttcagtcacttgacaacaacttcaccgttgcgccaa 10634315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 70 - 149
Target Start/End: Original strand, 11657695 - 11657774
Alignment:
Q  70 taaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgta 149  Q
    ||||||||||||| |||||| ||||||  ||| || |  |||||||| ||||| ||||||||||||||||||| ||||||    
T  11657695 taaaaaagggcagcccggtgaactaaagttcccgcgtgtgcagggttcgggaaggggtcccaccattttggtgtattgta 11657774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 88 - 244
Target Start/End: Complemental strand, 22187408 - 22187249
Alignment:
Q  88 tgcactaaatctcctgcatacgcagggtttgggaaagggtccca-ccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgttt 186  Q
    ||||||||| |||||||||| | |||||||||||| ||||| ||    |||||||| ||||||||||   |||  ||||| |||| ||||||||||||||    
T  22187408 tgcactaaagctcctgcatatgtagggtttgggaaggggtctcattgtttttggtgtattgtacgcagtcttatcatgttttttacacaagaggctgttt 22187309  T
Q  187 ctagaacttgaacctatg-cctttcaatcacgtgacaacaactttac-cgttgcgccaaa 244  Q
    | || |||| ||||  || ||||||| |||  |||||||||||||||  |||||||||||    
T  22187308 ccaggacttaaaccggtgacctttcagtcaaatgacaacaactttactagttgcgccaaa 22187249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 150
Target Start/End: Original strand, 37225958 - 37226037
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtac 150  Q
    |||||||||||  || |||||||||| |||  ||||||||| |||| ||||| |||||||||||||||| || |||||||    
T  37225958 aaaaaagggcaatccagtgcactaaacctctggcatacgcatggttcgggaaggggtcccaccattttgttgtattgtac 37226037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 74 - 136
Target Start/End: Complemental strand, 25622595 - 25622533
Alignment:
Q  74 aaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatt 136  Q
    ||||||||  ||||||||||||| |||| |||||||||||||  ||||| |||||||||||||    
T  25622595 aaagggcaatccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 25622533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 149
Target Start/End: Original strand, 12006339 - 12006404
Alignment:
Q  85 cggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatt-ttggtgcattgta 149  Q
    |||||||||||| |||| ||||| ||||||| |||||| ||||||||||||| |||||| ||||||    
T  12006339 cggtgcactaaagctcccgcataggcagggtctgggaaggggtcccaccattattggtgtattgta 12006404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 84 - 185
Target Start/End: Original strand, 16880657 - 16880757
Alignment:
Q  84 ccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctg 183  Q
    ||||||||||||| |||| ||||||||| |||  |||||  |||| ||||| ||||||| |||||||||| | ||||  |||| |||| |||||||||||    
T  16880657 ccggtgcactaaagctcccgcatacgcatggtccgggaagtggtcacacca-tttggtgtattgtacgcagccttaccctgttttttacacaagaggctg 16880755  T
Q  184 tt 185  Q
    ||    
T  16880756 tt 16880757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 200
Target Start/End: Original strand, 22907915 - 22907989
Alignment:
Q  124 gggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgtttctagaacttgaacc 200  Q
    |||||||||||||| |||| |||||| ||||| ||||| |||| |||| |||||||||||||||| | |||||||||    
T  22907915 gggtcccaccattt-ggtgtattgtatgcaaccttactctgtt-tttacacaagaggctgtttcttggacttgaacc 22907989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 168 - 243
Target Start/End: Complemental strand, 23974822 - 23974746
Alignment:
Q  168 tttagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
    |||| |||||||| |||||| || |||||||||  || |||| || |||| ||||||||||||||||||||||||||    
T  23974822 tttacacaagaggttgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccgttgcgccaa 23974746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 10306493 - 10306548
Alignment:
Q  93 taaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgt 148  Q
    |||| |||| |||||||||||||  ||||| ||||||||||||||||||| |||||    
T  10306493 taaagctcccgcatacgcagggtccgggaaggggtcccaccattttggtgtattgt 10306548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 199
Target Start/End: Complemental strand, 43574731 - 43574617
Alignment:
Q  84 ccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctg 183  Q
    ||||||| ||||| |||| |||||||||||||  ||||| ||||||||||| ||||||  |||||||||| | ||||  |||| | || |||||||  ||    
T  43574731 ccggtgctctaaagctcccgcatacgcagggtccgggaaggggtcccacca-tttggtatattgtacgcagccttaccctgttttctacacaagagattg 43574633  T
Q  184 tttctagaacttgaac 199  Q
    |||| || ||||||||    
T  43574632 tttccaggacttgaac 43574617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 168 - 233
Target Start/End: Original strand, 37024647 - 37024713
Alignment:
Q  168 tttagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc 233  Q
    |||| ||||||||||||||| || |||||||||  || ||||||| |||| ||||||||||||||||    
T  37024647 tttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 37024713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 84 - 134
Target Start/End: Complemental strand, 39801641 - 39801591
Alignment:
Q  84 ccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccacca 134  Q
    ||||||||||||| |||| ||||||| ||||| |||||| |||||||||||    
T  39801641 ccggtgcactaaagctcccgcatacgtagggtctgggaaggggtcccacca 39801591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 246
Target Start/End: Original strand, 12622106 - 12622171
Alignment:
Q  182 tgtttctagaacttgaacctatgc-ctttcaatcacgtgacaacaactttaccgttgcgccaaaac 246  Q
    ||||||||| ||||||||| |||  |||||||||| | ||||||||||||| ||||||| ||||||    
T  12622106 tgtttctaggacttgaacccatggtctttcaatcatgggacaacaactttatcgttgcgtcaaaac 12622171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 138
Target Start/End: Original strand, 21784343 - 21784396
Alignment:
Q  85 cggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatttt 138  Q
    |||||||||||| |||| |||||||||||||  || || |||||||||||||||    
T  21784343 cggtgcactaaacctcccgcatacgcagggtccggaaaggggtcccaccatttt 21784396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 64
Target Start/End: Complemental strand, 23129491 - 23129458
Alignment:
Q  31 ttaaataagggaaatgttaacaagtgcccttagg 64  Q
    ||||||||||||||||||||||| ||||||||||    
T  23129491 ttaaataagggaaatgttaacaaatgcccttagg 23129458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 115
Target Start/End: Complemental strand, 19093951 - 19093907
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggt 115  Q
    |||||||||||| ||||||||||||| ||||  ||||||||||||    
T  19093951 aaaaaagggcagcccggtgcactaaagctccaacatacgcagggt 19093907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 78 - 150
Target Start/End: Original strand, 39079755 - 39079827
Alignment:
Q  78 ggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtac 150  Q
    ||||| || |||||||||| |||| | |||| || |||  ||||| ||||||||||||||||||| |||||||    
T  39079755 ggcagccctgtgcactaaaactcccgtatacacatggtccgggaaggggtcccaccattttggtgtattgtac 39079827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 5e-29; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 73 - 243
Target Start/End: Original strand, 39460993 - 39461166
Alignment:
Q  73 aaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatt-ttggtgcattgtacgcaactttactatgttcttta 171  Q
    |||||||||  ||||||||||||| |||| |||||||||||||  ||||| ||||| ||||||| |||||| |||||||||| | ||||| |||| ||||    
T  39460993 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtctcaccattattggtgtattgtacgcagccttactctgtttttta 39461092  T
Q  172 gacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
     ||||||||||||||| || |||||||||  || ||||||| || | |||||||||||||||| ||||||||||    
T  39461093 cacaagaggctgtttccaggacttgaacccgtgacctttcagtctcatgacaacaactttaccagttgcgccaa 39461166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 68 - 243
Target Start/End: Complemental strand, 35261820 - 35261644
Alignment:
Q  68 cttaaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttc 167  Q
    ||||||||||||||  ||||||||||||| |||| |||||||||||||   |||| ||||||||||| ||||||| |||||||||||| ||||  ||||     
T  35261820 cttaaaaaagggcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccacca-tttggtgtattgtacgcaaccttaccctgttt 35261722  T
Q  168 tttagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    |||| ||||||| ||||||| ||  ||||||||  || |||| || |||| |||||||||||||||| ||||||||||    
T  35261721 tttacacaagagactgtttccagggcttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaa 35261644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 75 - 233
Target Start/End: Complemental strand, 45071398 - 45071241
Alignment:
Q  75 aagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagac 174  Q
    |||||||  |||||||||| || |||| ||||||||| |||  ||||| ||||||||||| ||||||| |||||||||| | ||||  |||| |||| ||    
T  45071398 aagggcaacccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgtt-tttacac 45071301  T
Q  175 aagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc 233  Q
    ||||||||||||| ||||||||||||  || |||| ||||||| ||||||||||||||||    
T  45071300 aagaggctgtttccagaacttgaacccgtgaccttacaatcacatgacaacaactttacc 45071241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 84 - 233
Target Start/End: Original strand, 20284079 - 20284232
Alignment:
Q  84 ccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatt-ttggtgcattgtacgcaacttta--ctatgttctttagacaagagg 180  Q
    ||||||||||||| |||| |||||||||||||  ||||| ||||||||||||| |||||| |||||||||| | |||  || | || |||| ||||||||    
T  20284079 ccggtgcactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttacccttttttttttatacaagagg 20284178  T
Q  181 ctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc 233  Q
    ||||||| || |||||||||  || ||||||| |||| ||||||||||||||||    
T  20284179 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 20284232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 72 - 233
Target Start/End: Original strand, 28817624 - 28817785
Alignment:
Q  72 aaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttta 171  Q
    ||||||||||  ||| ||||||||| |||| |||||||||||||  ||||| ||||||||||| || |||| |||||||||| | ||||  |||| ||||    
T  28817624 aaaaagggcaacccgatgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca-ttgggtgtattgtacgcagccttaccctgtttttta 28817722  T
Q  172 gacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc 233  Q
     ||||||||||||||| || |||||||||  || |||| || |||| ||||||||||||||||    
T  28817723 cacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc 28817785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 87 - 243
Target Start/End: Original strand, 44781517 - 44781675
Alignment:
Q  87 gtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatttt-ggtgcattgtacgcaactttactatgttctttagacaagaggctgtt 185  Q
    |||||||||| |||| ||||||||||||| |||||  |||||||| |||||| |||| ||||||| || | ||||  |||  |||| |||||||| ||||    
T  44781517 gtgcactaaagctcccgcatacgcagggtctgggacggggtcccaacatttttggtgtattgtacacagccttaccctgtcttttacacaagaggttgtt 44781616  T
Q  186 tctagaacttgaacctatgc-ctttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
    || || |||||||||  ||  |||||| |||||||||||||||||||||||||||||||    
T  44781617 tccaggacttgaacccgtgaactttcagtcacgtgacaacaactttaccgttgcgccaa 44781675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 74 - 241
Target Start/End: Complemental strand, 13160836 - 13160669
Alignment:
Q  74 aaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttaga 173  Q
    ||||||||  |||| ||||| || |||| |||||||||||||  ||||| ||||||||||| ||||||| |||||||||| | ||||  |||| |||| |    
T  13160836 aaagggcaacccggcgcactgaagctcccgcatacgcagggtccgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgtt-tttaca 13160739  T
Q  174 caagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgcc 241  Q
    ||||||||||||||||| |||||||||  || |||| || |||| |||||||||||||||| ||||||||    
T  13160738 caagaggctgtttctaggacttgaacccgtgaccttacagtcacatgacaacaactttaccagttgcgcc 13160669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 73 - 233
Target Start/End: Complemental strand, 36720932 - 36720772
Alignment:
Q  73 aaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttag 172  Q
    |||||||||  | ||||||||||| || | |||||||||||||  ||||| |||||||||||||| |||| |||||||||| | ||||  |||| ||||     
T  36720932 aaaagggcaaccgggtgcactaaagcttccgcatacgcagggtccgggaaggggtcccaccattt-ggtgtattgtacgcagccttaccctgttttttac 36720834  T
Q  173 acaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc 233  Q
    ||||||||||||||| || |||||||||  || |||| || |||| ||||||||||||||||    
T  36720833 acaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc 36720772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 84 - 233
Target Start/End: Original strand, 21070707 - 21070861
Alignment:
Q  84 ccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatt-ttggtgcattgtacgcaactttac---tatgttctttagacaagag 179  Q
    ||||||||||||| |||| |||||||||||||  ||||| ||||||||||||| |||||| |||||||||| | ||||   | | || |||| |||||||    
T  21070707 ccggtgcactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctttttttttttatacaagag 21070806  T
Q  180 gctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc 233  Q
    |||||||| || |||||||||  || ||||||| |||| ||||||||||||||||    
T  21070807 gctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 21070861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 71 - 243
Target Start/End: Original strand, 7136524 - 7136699
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatt-ttggtgcattgtacgcaactttactatgttctt 169  Q
    ||||||||| |  ||||||||||||| |||| ||||| || ||||  ||||| ||||||||||||| |||||| |||||||||| | ||||  || | ||    
T  7136524 aaaaaagggtaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctggtttt 7136623  T
Q  170 tagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    || |||||||| |||||| || ||||||||| ||| |||| || |||| |||||||||||||||| ||||||||||    
T  7136624 tacacaagaggttgtttccaggacttgaacccatgaccttccagtcacatgacaacaactttaccagttgcgccaa 7136699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 71 - 243
Target Start/End: Original strand, 12670247 - 12670418
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttt 170  Q
    ||||||||| |  ||||||||||| | |||| ||||| |||||||  ||||| ||||||||||| ||||||| |||||||||| | ||||  |||  |||    
T  12670247 aaaaaagggtaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgt--ttt 12670343  T
Q  171 agacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    | ||||||||||||||| || |||||||||  || ||||||| |||| |||||||||||||||| ||||||||||    
T  12670344 acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaa 12670418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 72 - 233
Target Start/End: Complemental strand, 25250661 - 25250498
Alignment:
Q  72 aaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatt-ttggtgcattgtacgcaactttactatgttcttt 170  Q
    ||||||||||  |||||||||||||||||| ||||| || ||||| ||||| ||||||||||||| |||||| |||||||||| |  |||  | || |||    
T  25250661 aaaaagggcaacccggtgcactaaatctcccgcatatgcggggttcgggaaggggtcccaccattattggtgtattgtacgcagccataccctatttttt 25250562  T
Q  171 agacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc 233  Q
    | |||| |||||||||| || |||||||| | || |||| || |||| ||||||||||||||||    
T  25250561 acacaataggctgtttccaggacttgaacatgtgaccttccagtcacatgacaacaactttacc 25250498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 71 - 243
Target Start/End: Original strand, 30454094 - 30454265
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttt 170  Q
    |||||||||||  ||||||||||| | |||| ||||| |||||||  ||||| ||||||||||| ||||||| || ||||||| | ||||  |||  |||    
T  30454094 aaaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca-tttggtgtatcgtacgcagccttaccttgt--ttt 30454190  T
Q  171 agacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    | ||||||||||||||| || |||||||||  || ||||||| |||| |||||||||||||||| ||||||||||    
T  30454191 acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaa 30454265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 84 - 243
Target Start/End: Original strand, 18164770 - 18164929
Alignment:
Q  84 ccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctg 183  Q
    ||||||||||||| |||| |||||||||||||  |||||| |||| || |  ||||||| |||||||||||| ||||  |||| |||| |||||||||||    
T  18164770 ccggtgcactaaagctcccgcatacgcagggtccgggaaatggtcacatc-ctttggtgtattgtacgcaaccttaccctgtt-tttacacaagaggctg 18164867  T
Q  184 tttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    |||| || |||||||||  || ||||||| |||| |||||||||||| ||| ||||||||||    
T  18164868 tttccaggacttgaacccgtgacctttcagtcacatgacaacaacttcaccggttgcgccaa 18164929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 84 - 243
Target Start/End: Original strand, 29521695 - 29521855
Alignment:
Q  84 ccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctg 183  Q
    ||||||||||||| |||| ||||||||||||| |||||  || |||||||| ||||||| |||||||||| | ||||  |||| |||| |||||||||||    
T  29521695 ccggtgcactaaagctcccgcatacgcagggtctgggatgggttcccacca-tttggtgtattgtacgcagccttaccctgttttttaaacaagaggctg 29521793  T
Q  184 tttctagaacttgaacctatg-cctttcaatcacgtgacaacaacttta-ccgttgcgccaa 243  Q
    |||| || |||||||||  || |||| || ||||  ||||||||||||| | ||||||||||    
T  29521794 tttccaggacttgaacccgtgaccttccagtcacacgacaacaactttatcagttgcgccaa 29521855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 72 - 200
Target Start/End: Original strand, 5135288 - 5135414
Alignment:
Q  72 aaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttta 171  Q
    ||||||||||| ||||||||| ||| ||||||||||||||||||  ||||| ||||||||||| ||||||| ||||||| || | ||||  | || ||||    
T  5135288 aaaaagggcagcccggtgcac-aaagctcctgcatacgcagggtccgggaaggggtcccacca-tttggtgtattgtacacagccttaccctctttttta 5135385  T
Q  172 gacaagaggctgtttctagaacttgaacc 200  Q
     ||||||||||||||| || |||||||||    
T  5135386 cacaagaggctgtttccaggacttgaacc 5135414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 124 - 243
Target Start/End: Original strand, 44742568 - 44742688
Alignment:
Q  124 gggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgaca 222  Q
    ||||||||||||||||||| |||||||||| | ||||  |||| |||| ||| |||  |||||| |||||||||||  ||| |||| |||||||| ||||    
T  44742568 gggtcccaccattttggtgtattgtacgcagccttaccctgttttttacacaggagattgtttccagaacttgaactcatgaccttacaatcacgcgaca 44742667  T
Q  223 acaactttaccgttgcgccaa 243  Q
    |||||||||||||||| ||||    
T  44742668 acaactttaccgttgcaccaa 44742688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 74 - 243
Target Start/End: Complemental strand, 17823711 - 17823541
Alignment:
Q  74 aaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttaga 173  Q
    ||||||||  ||||||||||||| |||||||||| |||||||| ||||| |||| |||||| ||||||| ||| ||||||   |||   || | |||| |    
T  17823711 aaagggcaacccggtgcactaaagctcctgcatatgcagggttcgggaaggggttccacca-tttggtgtattttacgcagtcttatcctggtttttaca 17823613  T
Q  174 caagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    |||||||||||||| || |||||||||  || ||||||  |||| |||||||||||||||| ||||||||||    
T  17823612 caagaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttaccagttgcgccaa 17823541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 87 - 199
Target Start/End: Original strand, 17250888 - 17251001
Alignment:
Q  87 gtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatt-ttggtgcattgtacgcaactttactatgttctttagacaagaggctgtt 185  Q
    |||||||||| ||||| ||||||||||||| ||||||||||||||||||| |||||| |||||||||  | |||   |||| |||| ||||||||||| |    
T  17250888 gtgcactaaagctccttcatacgcagggttcgggaaagggtcccaccattattggtgtattgtacgctgccttaacctgttttttacacaagaggctgct 17250987  T
Q  186 tctagaacttgaac 199  Q
    || || ||||||||    
T  17250988 tccaggacttgaac 17251001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 75 - 243
Target Start/End: Original strand, 42083699 - 42083868
Alignment:
Q  75 aagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagac 174  Q
    |||||||| ||  ||||||||| ||||  | ||| ||||||| ||||| ||||||||||||||||||  | |||||||| | || |    || |||| ||    
T  42083699 aagggcagcccaatgcactaaagctcccacgtacacagggttcgggaaggggtcccaccattttggtatactgtacgcagccttgccccattttttacac 42083798  T
Q  175 aagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
    || |||||||||| || |||||||||  || ||||||| |||||||||||||| ||||||||||||||||    
T  42083799 aaaaggctgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaattttaccgttgcgccaa 42083868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 84 - 243
Target Start/End: Original strand, 8483948 - 8484107
Alignment:
Q  84 ccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctg 183  Q
    ||||||| ||||| |||| ||||||||||||| |||||  |||||||||||  |||||| |||||||||| | || |  |||| |||| |||||||| ||    
T  8483948 ccggtgccctaaagctcccgcatacgcagggtctgggatggggtcccacca-attggtgtattgtacgcagccttgccctgttttttacacaagaggttg 8484046  T
Q  184 tttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
    |||| || ||||||||| ||| | ||| | ||||||| ||||  |||||||||||||||||    
T  8484047 tttccaggacttgaacccatgacatttaagtcacgtggcaaccgctttaccgttgcgccaa 8484107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 71 - 243
Target Start/End: Complemental strand, 6760962 - 6760787
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatt-ttggtgcattgtacgcaactttactatgttctt 169  Q
    |||||||||||  ||||||||||||| |||| ||||| || ||||  | ||| ||||||||||||| |||||| |||||||| | | ||||  |||| ||    
T  6760962 aaaaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgagaaggggtcccaccattattggtgtattgtacgaagccttaccctgttttt 6760863  T
Q  170 tagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    || ||||||||||||||| || |||||||||  || ||||  | |||  |||||||||||||||| ||||||||||    
T  6760862 tacacaagaggctgtttccaggacttgaacccgtgaccttctagtcatatgacaacaactttaccagttgcgccaa 6760787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 14018019 - 14018138
Alignment:
Q  125 ggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaa 223  Q
    |||||||||| ||| ||| ||||||||||   | ||  |||| |||| ||||||| ||||||| |  ||||||||| ||| |||||||||||||||||||    
T  14018019 ggtcccaccaatttagtgtattgtacgcagtctcaccctgttttttacacaagagactgtttccaagacttgaacccatgacctttcaatcacgtgacaa 14018118  T
Q  224 caactttaccgttgcgccaa 243  Q
    |||| |||||||||||||||    
T  14018119 caacattaccgttgcgccaa 14018138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 73 - 233
Target Start/End: Complemental strand, 26954271 - 26954108
Alignment:
Q  73 aaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatt-ttggtgcattgtacgcaactttactatg-ttcttt 170  Q
    |||||||||  || |||||||||| |||| ||||| ||  ||| |||||| ||||||||||||| |||||| |||||||||| | ||||  || || |||    
T  26954271 aaaagggcaacccagtgcactaaagctcccgcatatgcgaggtctgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttt 26954172  T
Q  171 agacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc 233  Q
    | ||||||||||||||| || |||||||||  || ||||  |||||| ||||||||||||||||    
T  26954171 acacaagaggctgtttccaggacttgaacccgtgaccttctaatcacatgacaacaactttacc 26954108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 84 - 243
Target Start/End: Complemental strand, 44530274 - 44530114
Alignment:
Q  84 ccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctg 183  Q
    ||||||||||||| |||| |||||||||||||   |||| ||||||||||| ||||||| |||||||||| | ||||  |||| |||| |||||||| ||    
T  44530274 ccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgttttttacacaagaggttg 44530176  T
Q  184 tttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    |||| |  |||||||||  || ||||  | |||| ||||| |||||||||| ||||||||||    
T  44530175 tttccaagacttgaacccgtgaccttctagtcacatgacagcaactttaccagttgcgccaa 44530114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 76 - 187
Target Start/End: Complemental strand, 29877227 - 29877117
Alignment:
Q  76 agggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagaca 175  Q
    ||||||| | ||||||||||  |||| |||||||||||||  ||||| ||||||||||| ||||||| |||||||||| | ||||  |||| |||| |||    
T  29877227 agggcagcctggtgcactaacgctcccgcatacgcagggtccgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgttttttacaca 29877129  T
Q  176 agaggctgtttc 187  Q
    | ||||||||||    
T  29877128 aaaggctgtttc 29877117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 187
Target Start/End: Complemental strand, 20870063 - 20869946
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatt-ttggtgcattgtacgcaactttactatgttctt 169  Q
    |||||||||||  ||||||||||||| |||| ||||| || ||||   |||| ||||||||||||| |||||| |||||||||| | ||||  |||| ||    
T  20870063 aaaaaagggcaacccggtgcactaaagctcccgcatatgcggggtcctggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttt 20869964  T
Q  170 tagacaagaggctgtttc 187  Q
    || ||||||| |||||||    
T  20869963 tacacaagagactgtttc 20869946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 73 - 137
Target Start/End: Complemental strand, 31457308 - 31457244
Alignment:
Q  73 aaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattt 137  Q
    |||||||||  ||||||||||| | |||| |||||||||||||||||||| |||||| |||||||    
T  31457308 aaaagggcaatccggtgcactagagctcccgcatacgcagggtttgggaaggggtcctaccattt 31457244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 363
Target Start/End: Complemental strand, 21664710 - 21664652
Alignment:
Q  305 aacacattcttatgcaaaaagtattttaaaaacactcatacacaaaatagacacattaa 363  Q
    ||||||||||||| ||||| ||||||||  |||| | ||||||||||||||||||||||    
T  21664710 aacacattcttatacaaaaggtattttaggaacattgatacacaaaatagacacattaa 21664652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 243
Target Start/End: Complemental strand, 26457719 - 26457681
Alignment:
Q  205 cctttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  26457719 cctttcaatcacgcgacaacaactttaccgttgcgccaa 26457681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 134
Target Start/End: Complemental strand, 27508035 - 27507985
Alignment:
Q  84 ccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccacca 134  Q
    ||||||||||||| |||| |||||||||||||| ||||| |||||||||||    
T  27508035 ccggtgcactaaagctcccgcatacgcagggttcgggaaggggtcccacca 27507985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 168 - 243
Target Start/End: Original strand, 20869589 - 20869666
Alignment:
Q  168 tttagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    |||| ||||||||||||||| || |||||||||  || ||||||| |||| |||||||||||||||| ||||||||||    
T  20869589 tttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaa 20869666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 86 - 238
Target Start/End: Complemental strand, 22598279 - 22598128
Alignment:
Q  86 ggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgtt 185  Q
    |||||||||||  ||| ||||||||| |||  ||||||||||| ||||| || |||| |||||||  | | ||||  |||| |||| |||||||| ||||    
T  22598279 ggtgcactaaag-tcccgcatacgcaaggtccgggaaagggtctcaccaatt-ggtgtattgtacatagccttaccctgttttttacacaagaggttgtt 22598182  T
Q  186 tctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgttgc 238  Q
    || || | |||||||  || ||||||| ||| ||||||||||||||||||||||    
T  22598181 tccaggatttgaacccgtgacctttcagtcatgtgacaacaactttaccgttgc 22598128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 73 - 137
Target Start/End: Complemental strand, 12626026 - 12625962
Alignment:
Q  73 aaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattt 137  Q
    |||||||||  ||||||||||||| |||| |||||||||||||  ||||  ||||||||||||||    
T  12626026 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggagggggtcccaccattt 12625962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 168 - 243
Target Start/End: Original strand, 30962866 - 30962942
Alignment:
Q  168 tttagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
    |||| ||||||||||||||| || |||||||    || |||||||||||| ||||||||||||| ||||||||||||    
T  30962866 tttacacaagaggctgtttccaggacttgaagtcgtgacctttcaatcacatgacaacaacttttccgttgcgccaa 30962942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 182
Target Start/End: Complemental strand, 5689757 - 5689659
Alignment:
Q  83 accggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggct 182  Q
    |||||||||||||| ||||  |||||||| |||| ||||| |||| |||||| ||||||| |||||||||| | ||||  || | |||| ||||||||||    
T  5689757 accggtgcactaaagctcccacatacgcatggttcgggaaggggttccacca-tttggtgtattgtacgcagccttaccctgctttttacacaagaggct 5689659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 154
Target Start/End: Complemental strand, 16013581 - 16013510
Alignment:
Q  84 ccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccacca-ttttggtgcattgtacgcaa 154  Q
    ||||||||||||| |||| ||||| ||||||| |||||| ||||| ||||| |||| ||| |||||||||||    
T  16013581 ccggtgcactaaagctcccgcataggcagggtctgggaaggggtcgcaccatttttagtgtattgtacgcaa 16013510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 104 - 232
Target Start/End: Original strand, 24365089 - 24365218
Alignment:
Q  104 catacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatg-ttctttagacaagaggctgtttctagaacttgaaccta 202  Q
    ||||||||||||  ||||| ||||||||||| ||||||| ||||| |||| | ||||  || || |||| ||||||||||||||||||  ||||||||      
T  24365089 catacgcagggtccgggaaggggtcccacca-tttggtgtattgttcgcagccttaccctgattttttacacaagaggctgtttctagggcttgaacccg 24365187  T
Q  203 tg-cctttcaatcacgtgacaacaactttac 232  Q
    || | ||| | |||| |||||||||||||||    
T  24365188 tgacattttagtcacatgacaacaactttac 24365218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 137
Target Start/End: Complemental strand, 26102655 - 26102589
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattt 137  Q
    |||||||||||  ||||||||||| | |||| ||||| |||||||  ||||| ||||||||||||||    
T  26102655 aaaaaagggcaacccggtgcactagagctcccgcataagcagggtccgggaaggggtcccaccattt 26102589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 125 - 230
Target Start/End: Complemental strand, 35106008 - 35105902
Alignment:
Q  125 ggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaa 223  Q
    |||||||||||| ||||| |||||||||| | ||||  | |  |||| |||||||| |||||| || |||||||||  || |||||||  ||||||||||    
T  35106008 ggtcccaccattctggtgtattgtacgcagccttacactctcttttacacaagaggttgtttccaggacttgaacccgtgacctttcagccacgtgacaa 35105909  T
Q  224 caacttt 230  Q
    |||||||    
T  35105908 caacttt 35105902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 243
Target Start/End: Complemental strand, 28407458 - 28407381
Alignment:
Q  168 tttagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    |||| ||||||||||||||| || |||||||||  || |||| || |||| |||||||||||||||| ||||||||||    
T  28407458 tttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaa 28407381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 151
Target Start/End: Original strand, 8897761 - 8897840
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacg 151  Q
    |||||||||||  | |||||| |||| |||| ||||| |||||||  ||||| ||||||||||| ||||||| ||||||||    
T  8897761 aaaaaagggcaaccgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccacca-tttggtgtattgtacg 8897840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 115
Target Start/End: Original strand, 27468089 - 27468133
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggt 115  Q
    |||||||||||  ||||||||||||| |||| |||||||||||||    
T  27468089 aaaaaagggcaacccggtgcactaaagctcccgcatacgcagggt 27468133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 74 - 122
Target Start/End: Complemental strand, 33867087 - 33867039
Alignment:
Q  74 aaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaa 122  Q
    ||||||||  ||||||||||||| || |||||||||||||||| |||||    
T  33867087 aaagggcaacccggtgcactaaagcttctgcatacgcagggttcgggaa 33867039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 2e-28; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 73 - 243
Target Start/End: Complemental strand, 11514571 - 11514401
Alignment:
Q  73 aaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttag 172  Q
    |||||||||  ||||||||||||| |||| ||||||||||||| |||| ||||||||||||| ||||||| |||||||||| | ||||| |||| ||||     
T  11514571 aaaagggcaatccggtgcactaaagctcccgcatacgcagggtctggg-aagggtcccacca-tttggtgtattgtacgcagccttactttgttttttac 11514474  T
Q  173 acaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    ||||||||||||||| || | |||||||  || |||| || |||| |||||||||||||||| ||||||||||    
T  11514473 acaagaggctgtttccaggagttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaa 11514401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 74 - 243
Target Start/End: Complemental strand, 14530455 - 14530283
Alignment:
Q  74 aaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatt-ttggtgcattgtacgcaactttactatgttctttag 172  Q
    ||||||||  ||||||||||||| |||| |||||||||||||  ||||| ||||||||||||| |||||| |||||||| | | ||||  |||| ||||     
T  14530455 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgtagccttaccctgttttttat 14530356  T
Q  173 acaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    ||||||||||||||| || |||||||||  || ||||||| |||| |||||||||||||||| ||||||||||    
T  14530355 acaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaa 14530283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 77 - 243
Target Start/End: Original strand, 4516354 - 4516520
Alignment:
Q  77 gggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaa 176  Q
    |||||| ||||| ||||||| || |  ||||||||||||  ||||| ||||||||||| || |||| |||||||||| | || |  |||| |||| ||||    
T  4516354 gggcagcccggtacactaaagcttccacatacgcagggtccgggaaggggtcccaccaatt-ggtgtattgtacgcagcgttgccctgttttttacacaa 4516452  T
Q  177 gaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
    ||||||||||||||||||||||  | || ||||||| |||||||||||||||||||||||||||||||    
T  4516453 gaggctgtttctagaacttgaatatgtgacctttcagtcacgtgacaacaactttaccgttgcgccaa 4516520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 73 - 243
Target Start/End: Original strand, 8455315 - 8455486
Alignment:
Q  73 aaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttag 172  Q
    |||||||||  ||||||||||||| |||| |||||||||||||  ||||| ||||||||||| ||||||| |||||||||| | ||||  |||  ||||     
T  8455315 aaaagggcaacccggtgcactaaagctccggcatacgcagggtccgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgtgttttac 8455413  T
Q  173 acaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    ||||||||||||||| || |||||||||  || |||| || |||| |||||||||||||||| ||||||||||    
T  8455414 acaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaa 8455486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 74 - 243
Target Start/End: Complemental strand, 10543835 - 10543663
Alignment:
Q  74 aaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccacca-ttttggtgcattgtacgcaactttactatgttctttag 172  Q
    ||||||||  ||||||||||||| |||| |||||||||||||  ||||| ||||||||||| |||||||| |||||||||| | ||||  |||| ||||     
T  10543835 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttac 10543736  T
Q  173 acaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaacttta-ccgttgcgccaa 243  Q
    ||||||||| ||||| || |||||||||  || ||||||| |||| |||||||||||||| | ||||||||||    
T  10543735 acaagaggccgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttatcagttgcgccaa 10543663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 73 - 243
Target Start/End: Complemental strand, 44643659 - 44643488
Alignment:
Q  73 aaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatg-ttcttta 171  Q
    |||||||||| ||||||||||||  |||| ||||||||||||| |||||| ||||||||||| |||||| ||||||||||| | ||||| || || ||||    
T  44643659 aaaagggcagcccggtgcactaaggctcccgcatacgcagggtctgggaaggggtcccacca-tttggtacattgtacgcagccttactctgttttttta 44643561  T
Q  172 gacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
       |||||||| ||||||||||||||||   || ||||||| |||| |||  ||||||||||| |||||||||    
T  44643560 cggaagaggctctttctagaacttgaacacgtgacctttcagtcacatgatgacaactttaccattgcgccaa 44643488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 90 - 243
Target Start/End: Original strand, 99281 - 99432
Alignment:
Q  90 cactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgtttcta 189  Q
    ||||||| |||| |||||| |||||| || ||| |||| ||||||||| |||| |||||||||| | || | ||||| ||||  ||||||||||||||||    
T  99281 cactaaagctcccgcatacacagggtctgagaaggggttccaccattt-ggtgtattgtacgcagccttgccatgtttttta--caagaggctgtttcta 99377  T
Q  190 gaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
    | |||||||||  || ||||||| |||||||||||||||||||| ||||||||||    
T  99378 ggacttgaacccgtgacctttcagtcacgtgacaacaactttactgttgcgccaa 99432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 72 - 243
Target Start/End: Complemental strand, 27573757 - 27573586
Alignment:
Q  72 aaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttta 171  Q
    ||||||||||  ||| ||||||||| ||||  ||||| |||||||||||||| ||| |||||| ||||||| |||||||||| | |||| ||||| | ||    
T  27573757 aaaaagggcaacccgatgcactaaagctcccacatacacagggtttgggaaatggttccacca-tttggtgtattgtacgcagccttaccatgtt-tata 27573660  T
Q  172 gacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
     ||||||||||||| |  | ||||||||| ||| ||||||| |||| |||||||||||||||| ||||||||||    
T  27573659 cacaagaggctgttgcccggacttgaaccaatgacctttcagtcacatgacaacaactttaccagttgcgccaa 27573586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 72 - 243
Target Start/End: Original strand, 21377072 - 21377242
Alignment:
Q  72 aaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttta 171  Q
    |||||||||||  |||||||| ||| ||||  ||||||||||||| ||||| ||||||||||| ||||||||||||||| || | ||||  |||| ||||    
T  21377072 aaaaagggcagctcggtgcac-aaagctcccacatacgcagggttcgggaaggggtcccacca-tttggtgcattgtacccagccttaccctgtttttta 21377169  T
Q  172 gacaagaggctgtttctagaacttgaac-ctatgcctttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
     |||||||| ||||||||  |||||||| |    ||||||| |||| ||||||||||||||||||||| ||||    
T  21377170 cacaagaggatgtttctatgacttgaactcgtaacctttcagtcacatgacaacaactttaccgttgctccaa 21377242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 73 - 243
Target Start/End: Original strand, 21779260 - 21779429
Alignment:
Q  73 aaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttag 172  Q
    |||||||||  ||||||||||| | |||| ||||| |||||||  ||||| ||||||||||| ||||||| |||||||||||| ||||  |||  ||||     
T  21779260 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca-tttggtgtattgtacgcaaccttaccctgt--tttac 21779356  T
Q  173 acaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    |||||||||||| || || |||||||||  || ||||||| |||| |||||||||||| ||| ||||||||||    
T  21779357 acaagaggctgtctccaggacttgaacccgtgacctttcagtcacatgacaacaacttcaccagttgcgccaa 21779429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 74 - 243
Target Start/End: Original strand, 25079717 - 25079888
Alignment:
Q  74 aaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatg-ttctttag 172  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||  ||||| ||||||||||| || |||| |||||||||| | ||||  || || ||||     
T  25079717 aaagggcaacccggtgcactaaagctcttgcatacgcagggtccgggaaggggtcccacca-ttcggtgtattgtacgcatccttaccttgtttttttac 25079815  T
Q  173 acaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    |||||||| ||||||||  |||||||||  || |||| || |||| |||||||||||||||| ||||||||||    
T  25079816 acaagaggttgtttctaagacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaa 25079888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 73 - 243
Target Start/End: Complemental strand, 9671315 - 9671145
Alignment:
Q  73 aaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttag 172  Q
    |||||||||  ||||||||||||| |||| |||||||||||||  ||||| ||||||||||| ||||||| |||||||||| | ||||  |||  ||||     
T  9671315 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgt--tttac 9671219  T
Q  173 acaagaggctgtttctagaacttgaacctatgcc--tttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    ||||||||||||||| || | |||||||  || |  || || |||| |||||||||||||||| ||||||||||    
T  9671218 acaagaggctgtttccaggatttgaacccgtgacatttccagtcacatgacaacaactttaccggttgcgccaa 9671145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 200
Target Start/End: Complemental strand, 10546301 - 10546172
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatg-ttctt 169  Q
    |||||||||||  ||||||||||||| |||| |||||||||||||  ||||| ||||||||||| ||||||| |||||||||| | ||||  || || ||    
T  10546301 aaaaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgtttttt 10546203  T
Q  170 tagacaagaggctgtttctagaacttgaacc 200  Q
    || |||||||| |||||| || |||||||||    
T  10546202 tatacaagaggatgtttccaggacttgaacc 10546172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 73 - 233
Target Start/End: Original strand, 24200622 - 24200784
Alignment:
Q  73 aaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatttt-ggtgcattgtacgcaactttactatgttcttta 171  Q
    |||||||||  ||||||||||||| |||   ||||| ||||||  ||||| || |||||||||||| |||| |||||||||| | ||||  |||| ||||    
T  24200622 aaaagggcaacccggtgcactaaagctctcacatactcagggtccgggaagggttcccaccatttttggtgtattgtacgcagccttaccctgtttttta 24200721  T
Q  172 gacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc 233  Q
     ||||||||||||||| || |||||||||  || | ||||| |||| ||||||||||||||||    
T  24200722 cacaagaggctgtttccaggacttgaacccgtgacttttcagtcacatgacaacaactttacc 24200784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 105 - 243
Target Start/End: Original strand, 12023950 - 12024088
Alignment:
Q  105 atacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgtttctagaacttgaacctatg 204  Q
    |||||||||||  ||||  |||||||||||||| |||| |||||||||| | ||||  |||| |||| ||||||||||||||| || |||||||||  ||    
T  12023950 atacgcagggtccgggagggggtcccaccattt-ggtgtattgtacgcagccttaccctgtt-tttacacaagaggctgtttccaggacttgaacccgtg 12024047  T
Q  205 -cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
     ||||||| |||| |||||||||||||||| ||||||||||    
T  12024048 acctttcagtcacatgacaacaactttaccagttgcgccaa 12024088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 71 - 233
Target Start/End: Original strand, 25249735 - 25249896
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttt 170  Q
    |||||||||||  ||||||||||||| |||  |||||||||||||| ||||| || |||||||| ||||||| |||||||||| | ||||  |||| | |    
T  25249735 aaaaaagggcaacccggtgcactaaagctcacgcatacgcagggttcgggaagggatcccacca-tttggtgtattgtacgcagccttaccctgtt-tgt 25249832  T
Q  171 agacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc 233  Q
    | ||||||| ||||||| |  |||||||||  || |||| || |||| ||||||||||||||||    
T  25249833 acacaagagactgtttccatgacttgaacccgtgaccttacagtcacatgacaacaactttacc 25249896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 200
Target Start/End: Complemental strand, 14444866 - 14444739
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttt 170  Q
    |||||||||||  | ||||||||||| |||| |||||||||||||  ||||| ||||||||||| ||||||| || |||| || | ||||  |||| |||    
T  14444866 aaaaaagggcaacctggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca-tttggtgtatcgtacacagccttaccctgtt-ttt 14444769  T
Q  171 agacaagaggctgtttctagaacttgaacc 200  Q
    | ||||||||||||||| || |||||||||    
T  14444768 acacaagaggctgtttccaggacttgaacc 14444739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 69 - 229
Target Start/End: Original strand, 19977709 - 19977869
Alignment:
Q  69 ttaaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttct 168  Q
    ||||||||||| |  | ||||||||||| |||| |||||| || |||| ||||| || |||||||| ||||||| |||||||||||| |||   | || |    
T  19977709 ttaaaaaagggtaatctggtgcactaaagctcccgcatacacaaggttcgggaagggatcccacca-tttggtgtattgtacgcaaccttatcctatttt 19977807  T
Q  169 ttagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactt 229  Q
    ||| | ||||||||||||| ||||||||||||  || ||||||  |||| ||||||||||||    
T  19977808 ttacaaaagaggctgtttccagaacttgaacccgtgacctttcggtcacatgacaacaactt 19977869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 85 - 231
Target Start/End: Complemental strand, 5841154 - 5841006
Alignment:
Q  85 cggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatt-ttggtgcattgtacgcaactttactatgttctttagacaagaggctg 183  Q
    |||||||||||| |||| ||||| || ||||  ||||| ||||||||||||| ||| || |||||||||| | ||||  | || |||| |||| ||||||    
T  5841154 cggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattgatgtattgtacgcatccttaccctattttttacacaaaaggctg 5841055  T
Q  184 tttctagaacttgaacctatg-cctttcaatcacgtgacaacaacttta 231  Q
    ||||||| |||||||||  || |||| || |||| ||||||||||||||    
T  5841054 tttctaggacttgaacccgtgaccttccagtcacatgacaacaacttta 5841006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 70 - 233
Target Start/End: Complemental strand, 17668141 - 17667978
Alignment:
Q  70 taaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctt 169  Q
    ||||||||||||  ||||||||||||| ||||   |||||||||||| | ||| |||| |||||| ||||||| |||||||||| | ||||  || | ||    
T  17668141 taaaaaagggcaacccggtgcactaaagctcccatatacgcagggttcgagaaggggttccacca-tttggtgtattgtacgcagccttaccctgatttt 17668043  T
Q  170 tagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc 233  Q
    || |||||||| | |||| || |||||||||  || |||| || |||| ||||||||||||||||    
T  17668042 tacacaagaggttctttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc 17667978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 74 - 233
Target Start/End: Complemental strand, 23397899 - 23397742
Alignment:
Q  74 aaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttaga 173  Q
    ||||||||  ||||||||||| | |||| ||||| | |||||  | ||| |||||||||||||| |||| |||||||| | | ||||  | ||  ||| |    
T  23397899 aaagggcaacccggtgcactagagctcccgcatatgtagggtccgagaaggggtcccaccattt-ggtgtattgtacgtagccttaccctatt--ttaca 23397803  T
Q  174 caagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc 233  Q
    |||||||||||||| || ||||||||| ||| ||||||| |||| ||||||||||||||||    
T  23397802 caagaggctgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttacc 23397742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 98 - 236
Target Start/End: Complemental strand, 33795396 - 33795258
Alignment:
Q  98 ctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcatt-gtacgcaactttactatgttctttagacaagaggctgtttctagaacttg 196  Q
    |||| |||||| |||||| |||||| ||||||||||||   |||| ||| ||||||| | ||||  |||| ||||  ||||||| ||||||  | |||||    
T  33795396 ctcccgcatacacagggtctgggaaggggtcccaccata--ggtgtatttgtacgcagccttaccctgttttttacccaagaggttgtttccgggacttg 33795299  T
Q  197 aacctatg-cctttcaatcacgtgacaacaactttaccgtt 236  Q
    ||||  || ||||||||||||||||||||||||||||||||    
T  33795298 aacccgtgacctttcaatcacgtgacaacaactttaccgtt 33795258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 74 - 187
Target Start/End: Original strand, 40762234 - 40762346
Alignment:
Q  74 aaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttaga 173  Q
    ||||||||  ||||||||||||| ||||  ||||||||||||   |||||||||||||||| ||||||| |||||||| | | ||||   ||| |||| |    
T  40762234 aaagggcaacccggtgcactaaagctcccacatacgcagggtccaggaaagggtcccacca-tttggtgtattgtacgtagccttacccagttttttaca 40762332  T
Q  174 caagaggctgtttc 187  Q
    ||||||||||||||    
T  40762333 caagaggctgtttc 40762346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 70 - 233
Target Start/End: Complemental strand, 17623703 - 17623540
Alignment:
Q  70 taaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctt 169  Q
    ||||||||||||  || |||||||||| || |  |||||||||| || ||||| |||| |||||| ||||||| |||||||||| | ||||  || | ||    
T  17623703 taaaaaagggcaacccagtgcactaaagcttccacatacgcaggattcgggaaggggttccacca-tttggtgtattgtacgcagccttaccctgatttt 17623605  T
Q  170 tagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc 233  Q
    || |||||||| |||||| || |||||||||  || |||| || || | ||||||||||||||||    
T  17623604 tacacaagaggttgtttcgaggacttgaacccgtgaccttccagtcgcatgacaacaactttacc 17623540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 84 - 233
Target Start/End: Original strand, 26684630 - 26684781
Alignment:
Q  84 ccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttt-agacaagagg-c 181  Q
    |||||||| |||| |||| |||||||||||||| |||||  ||||||||||||| | |  |||||||||| | |||| || || ||| | |||||||| |    
T  26684630 ccggtgcattaaagctcccgcatacgcagggttcgggaagaggtcccaccatttag-tatattgtacgcagccttaccatatttttttacacaagaggtc 26684728  T
Q  182 tgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc 233  Q
    |||||  || |||| ||||| || |||||||||||| ||||||||||||||||    
T  26684729 tgttttcaggacttaaacctttgacctttcaatcacatgacaacaactttacc 26684781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 187
Target Start/End: Complemental strand, 36871629 - 36871516
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttt 170  Q
    |||||||||||  ||||||||||||| |||| ||||||||| |||  ||||| ||||||||||| ||||||| |||||||||| | ||||  |||| ||     
T  36871629 aaaaaagggcaacccggtgcactaaagctcccgcatacgca-ggtccgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgtt-ttc 36871533  T
Q  171 agacaagaggctgtttc 187  Q
    | |||||||||||||||    
T  36871532 acacaagaggctgtttc 36871516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 86 - 200
Target Start/End: Complemental strand, 19615116 - 19615002
Alignment:
Q  86 ggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatt-ttggtgcattgtacgcaactttactatgttctttagacaagaggctgt 184  Q
    ||||||||||| ||||||||||||||||||| ||||| |||| |||| ||| |||||  ||||||||||   ||||  |||| |||| |||||||| |||    
T  19615116 ggtgcactaaagctcctgcatacgcagggttcgggaaggggt-ccactattattggtatattgtacgcagtcttaccctgttttttatacaagaggatgt 19615018  T
Q  185 ttctagaacttgaacc 200  Q
    ||| || |||||||||    
T  19615017 ttcaaggacttgaacc 19615002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 86 - 231
Target Start/End: Original strand, 31158451 - 31158598
Alignment:
Q  86 ggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccacca-ttttggtgcattgtacgcaactttactatgttctttagacaagaggctgt 184  Q
    |||| |||||| |||| ||||||||||||| |||||| ||||||||||| |||||||  |||||| ||||  ||||  |||| ||||  |||||||||||    
T  31158451 ggtgtactaaagctcccgcatacgcagggtctgggaaggggtcccaccatttttggtttattgtatgcaatcttaccctgttttttacgcaagaggctgt 31158550  T
Q  185 ttctagaacttgaacctatg-cctttcaatcacgtgacaacaacttta 231  Q
    ||  |  |||| ||||  || ||||||| |||| ||||||||||||||    
T  31158551 tttgaagactttaacccttgacctttcagtcacatgacaacaacttta 31158598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 224
Target Start/End: Complemental strand, 25641639 - 25641487
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttt 170  Q
    |||||||| ||  ||||| ||||||| |||  ||||||||||| || ||||| |||||||| || ||||||| |||||||||||||||||  |||| ||     
T  25641639 aaaaaaggacaatccggttcactaaagctctcgcatacgcaggattcgggaaggggtccca-caatttggtgtattgtacgcaactttaccctgtt-ttc 25641542  T
Q  171 agacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaac 224  Q
    | |||| | |||||||| || |||||||||  || ||||||| |||| |||||||    
T  25641541 acacaaaatgctgtttccaggacttgaacccgtgacctttcagtcacatgacaac 25641487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 31523353 - 31523303
Alignment:
Q  87 gtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattt 137  Q
    |||||||||| |||| ||||| ||||||||||||||||||| |||||||||    
T  31523353 gtgcactaaagctcccgcatatgcagggtttgggaaagggttccaccattt 31523303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 72 - 121
Target Start/End: Original strand, 23052963 - 23053012
Alignment:
Q  72 aaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttggga 121  Q
    ||||||||||| ||||||||| ||| |||||||||||||||||| |||||    
T  23052963 aaaaagggcagcccggtgcacaaaagctcctgcatacgcagggtctggga 23053012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 91 - 166
Target Start/End: Original strand, 19185760 - 19185836
Alignment:
Q  91 actaaatctcctgcatacgcagggtttgggaaagggtcccaccattttg-gtgcattgtacgcaactttactatgtt 166  Q
    |||||| |||| |||||||||||||   |||| |||| ||||||||||  ||||||||||||||||||||| |||||    
T  19185760 actaaagctcccgcatacgcagggtccaggaaggggttccaccattttttgtgcattgtacgcaactttaccatgtt 19185836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 134
Target Start/End: Complemental strand, 24890533 - 24890486
Alignment:
Q  87 gtgcactaaatctcctgcatacgcagggtttgggaaagggtcccacca 134  Q
    |||||||||| ||||||||||||||||||  ||||| |||||||||||    
T  24890533 gtgcactaaagctcctgcatacgcagggtccgggaaggggtcccacca 24890486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 235
Target Start/End: Original strand, 23145742 - 23145859
Alignment:
Q  118 gggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgtttctagaacttgaacctatg-cctttcaatcac 216  Q
    ||||||||||||||||| || |||| |||||||||| | ||||  |||| |||| ||||||| ||||||  |  |||||||||  || ||||||| ||||    
T  23145742 gggaaagggtcccaccaatt-ggtgtattgtacgcagccttacactgttttttacacaagagtctgttttcaagacttgaacccgtgacctttcagtcac 23145840  T
Q  217 gtgacaacaactttaccgt 235  Q
    |  ||||||||||||||||    
T  23145841 gctacaacaactttaccgt 23145859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 84 - 138
Target Start/End: Complemental strand, 23488608 - 23488554
Alignment:
Q  84 ccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatttt 138  Q
    ||||||||||||| |||  |||||||||||||  ||||| |||||||||||||||    
T  23488608 ccggtgcactaaagctctcgcatacgcagggtccgggaaggggtcccaccatttt 23488554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 235
Target Start/End: Original strand, 23557532 - 23557649
Alignment:
Q  118 gggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgtttctagaacttgaacctatg-cctttcaatcac 216  Q
    ||||||||||||||||| || |||| |||||||||| | ||||  |||| |||| ||||||| ||||||  |  |||||||||  || ||||||| ||||    
T  23557532 gggaaagggtcccaccaatt-ggtgtattgtacgcagccttacactgttttttacacaagagtctgttttcaagacttgaacccgtgacctttcagtcac 23557630  T
Q  217 gtgacaacaactttaccgt 235  Q
    |  ||||||||||||||||    
T  23557631 gctacaacaactttaccgt 23557649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 233
Target Start/End: Complemental strand, 7214659 - 7214510
Alignment:
Q  86 ggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttg-gtgcattgtacgcaactttactatgttctttagacaagaggctgt 184  Q
    ||||||||||| |||  |||||||||| ||  | ||| || || |||||||||  ||| |||||||||| | ||||  |||  |||| ||||||| ||||    
T  7214659 ggtgcactaaaactctcgcatacgcagtgtccgagaagggatctcaccattttttgtgtattgtacgcagccttaccctgtattttacacaagagactgt 7214560  T
Q  185 ttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc 233  Q
    ||| |  ||||||||| ||| ||||||| |||| ||||||||||||||||    
T  7214559 ttccaagacttgaacccatgacctttcagtcacatgacaacaactttacc 7214510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 153
Target Start/End: Complemental strand, 17471675 - 17471606
Alignment:
Q  84 ccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgca 153  Q
    ||||||||||||| |||| ||||| |||||||  ||||| ||||| || |||||||||  ||||||||||    
T  17471675 ccggtgcactaaaactcccgcataggcagggtcagggaaggggtctcatcattttggtatattgtacgca 17471606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 233
Target Start/End: Complemental strand, 17896381 - 17896235
Alignment:
Q  88 tgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaacttta--ctatgttctttagacaagaggctgtt 185  Q
    ||||||||| ||||  ||||||||||||  | ||| ||||||||||| ||||||  |||||||||| | |||  |||| || |||| |||||||| ||||    
T  17896381 tgcactaaagctcccacatacgcagggtccgagaaggggtcccacca-tttggtatattgtacgcagccttaccctat-ttttttacacaagaggttgtt 17896284  T
Q  186 tctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc 233  Q
    ||||| ||||||| |  || ||||||  |||| ||||||||||||||||    
T  17896283 tctaggacttgaatccgtgacctttcggtcacatgacaacaactttacc 17896235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 187
Target Start/End: Complemental strand, 30826158 - 30826060
Alignment:
Q  86 ggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgtt 185  Q
    ||||||||||| |||| ||||| | ||||| |||||| |||| ||||||||| |||| |||||||||||| ||||  | || |||| |||||||||||||    
T  30826158 ggtgcactaaagctcccgcatatgtagggtctgggaa-gggttccaccattt-ggtgtattgtacgcaaccttaccctatt-tttacacaagaggctgtt 30826062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 187
Target Start/End: Original strand, 32781312 - 32781400
Alignment:
Q  98 ctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgtttc 187  Q
    |||| |||||| |||||| |||||| ||||||||||| ||||||| ||||||||||   ||||  |||| |||| |||||||| ||||||    
T  32781312 ctcccgcatacacagggtctgggaaggggtcccacca-tttggtgtattgtacgcagtcttaccctgttttttacacaagaggttgtttc 32781400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 134
Target Start/End: Complemental strand, 34080237 - 34080176
Alignment:
Q  73 aaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccacca 134  Q
    |||||||||  ||||||||||||| |||| ||||| |||||||  ||||| |||||||||||    
T  34080237 aaaagggcaacccggtgcactaaaactcccgcatatgcagggtccgggaaggggtcccacca 34080176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 72
Target Start/End: Complemental strand, 37426691 - 37426650
Alignment:
Q  31 ttaaataagggaaatgttaacaagtgcccttaggacacttaa 72  Q
    |||||| |||||||| |||||||||| |||||||||||||||    
T  37426691 ttaaattagggaaatattaacaagtgaccttaggacacttaa 37426650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 139
Target Start/End: Original strand, 45235833 - 45235882
Alignment:
Q  90 cactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttg 139  Q
    ||||||| |||||||||||| ||||| ||| || ||||||||||||||||    
T  45235833 cactaaagctcctgcatacgtagggtctggtaaggggtcccaccattttg 45235882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 70 - 134
Target Start/End: Complemental strand, 34766394 - 34766330
Alignment:
Q  70 taaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccacca 134  Q
    |||||||||| |  ||| ||||||||| |||| |||||||||||||  ||||| |||||||||||    
T  34766394 taaaaaagggaaacccgttgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca 34766330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 75 - 135
Target Start/End: Original strand, 40579750 - 40579810
Alignment:
Q  75 aagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccat 135  Q
    |||||||  ||||||||||||| |||| |||||| ||||||  ||||| ||||||||||||    
T  40579750 aagggcaacccggtgcactaaagctcccgcatactcagggtccgggaaggggtcccaccat 40579810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 2e-28; HSPs: 73)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 71 - 243
Target Start/End: Complemental strand, 18944807 - 18944631
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaat-ctcctgcatacgcagggtttgggaaagggtcccaccatt-ttggtgcattgtacgcaactttactatgttct 168  Q
    |||||||||||  |||||||||||||  |||| |||||||||||||  ||||| ||||||||||||| |||||| |||||||||| | ||||  |||| |    
T  18944807 aaaaaagggcaacccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattgttggtgtattgtacgcagccttaccctgtttt 18944708  T
Q  169 ttagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    ||| ||||||||||||||| ||  ||||||||| || ||||||| |||| |||||||||||||||| ||||||||||    
T  18944707 ttacacaagaggctgtttccaggccttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaa 18944631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 71 - 243
Target Start/End: Original strand, 2435783 - 2435956
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttt 170  Q
    ||||||||| || ||||||||||||| |||| |||| || |||||  || || ||||||||||||||||||| ||||||||||   ||||  | || ||     
T  2435783 aaaaaaggggagtccggtgcactaaagctcccgcatgcggagggtacggaaaggggtcccaccattttggtgtattgtacgcaggcttaccctatttttc 2435882  T
Q  171 agacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
    | ||| ||||||||||| || |||||||||  || ||||||| |||||||||||||||||||||||||||||||    
T  2435883 acacaggaggctgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttaccgttgcgccaa 2435956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 119 - 243
Target Start/End: Original strand, 17470390 - 17470515
Alignment:
Q  119 ggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacg 217  Q
    |||| ||||||||| ||||||||| |||||||||| | ||||  |||| |||| |||||||||||||||||| ||||||||| ||| || |||| |||||    
T  17470390 ggaacgggtcccactattttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttctaggacttgaacccatgaccattcagtcacg 17470489  T
Q  218 tgacaacaactttaccgttgcgccaa 243  Q
    ||||||||||||||||||||| ||||    
T  17470490 tgacaacaactttaccgttgcaccaa 17470515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 119 - 243
Target Start/End: Original strand, 27136696 - 27136821
Alignment:
Q  119 ggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacg 217  Q
    |||| ||||||||||||||||||| |||||||||||| |||| ||||| |||| |||||||| |||| | |||||||||||   || |||| ||||||||    
T  27136696 ggaaggggtcccaccattttggtgtattgtacgcaaccttaccatgttttttacacaagaggttgttcccagaacttgaactcgtgtccttccaatcacg 27136795  T
Q  218 tgacaacaactttaccgttgcgccaa 243  Q
    |||||||||||||||||||| |||||    
T  27136796 tgacaacaactttaccgttgtgccaa 27136821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 73 - 243
Target Start/End: Original strand, 6983810 - 6983978
Alignment:
Q  73 aaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttag 172  Q
    |||||||||| ||||||||| ||| ||||||| ||||||||||  || || |||||||||||||| |||| ||||||||||   ||||  |||| ||||     
T  6983810 aaaagggcagcccggtgcaccaaagctcctgcctacgcagggtccggaaaggggtcccaccattt-ggtgtattgtacgcatacttaccctgttttttat 6983908  T
Q  173 acaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
    ||  ||||||||||| || |||||||||| || ||||||| ||||||||||||||||||||| |||||||||    
T  6983909 ac--gaggctgtttccaggacttgaacctgtgacctttcagtcacgtgacaacaactttaccattgcgccaa 6983978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 73 - 243
Target Start/End: Complemental strand, 10668386 - 10668208
Alignment:
Q  73 aaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatt-ttggtgcattgtacgcaactttactatgttcttta 171  Q
    |||||||||  ||||||||||||| |||| ||||||||||||   ||||| ||||||||||||| |||||| |||||||||||| ||||  |||| ||||    
T  10668386 aaaagggcaacccggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccttgtttttta 10668287  T
Q  172 gacaagaggctgtttctagaacttgaacctatg-cctttca-----atcacgtgacaacaactttacc-gttgcgccaa 243  Q
     ||||||||||||||| || |||||||||  || |||||||     ||||| |||||||||||||||| ||||||||||    
T  10668286 cacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatcacatgacaacaactttaccagttgcgccaa 10668208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 84 - 243
Target Start/End: Complemental strand, 14617186 - 14617026
Alignment:
Q  84 ccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctg 183  Q
    ||||||||||||| |||| ||||| |||||||  ||||| || ||||||||||| |||| |||||||||||| ||||  |||| |||| |||||||||||    
T  14617186 ccggtgcactaaagctcccgcatatgcagggtccgggaagggatcccaccattt-ggtgtattgtacgcaaccttaccttgttatttacacaagaggctg 14617088  T
Q  184 tttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    |||| || ||||||||   || ||||||| |||| |||||||||||||||| ||||||||||    
T  14617087 tttccaggacttgaactcgtgacctttcagtcacatgacaacaactttaccggttgcgccaa 14617026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 86 - 243
Target Start/End: Original strand, 32632569 - 32632726
Alignment:
Q  86 ggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgtt 185  Q
    |||||||| || |||| ||||| |||||||||||||| ||||||||||| ||||||| |||||||||| | ||||  |||| |||| |||||||||||||    
T  32632569 ggtgcactcaagctcccgcatatgcagggtttgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgtt-tttacacaagaggctgtt 32632666  T
Q  186 tctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    || || |||||||||  || ||||||| |||  |||||||||||||||| ||||||||||    
T  32632667 tccaggacttgaacccgtgacctttcagtcatatgacaacaactttaccagttgcgccaa 32632726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 73 - 233
Target Start/End: Original strand, 20004089 - 20004251
Alignment:
Q  73 aaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatt-ttggtgcattgtacgcaactttactatgttcttta 171  Q
    |||||||||  ||||||||||||| |||| ||||| || |||| |||||| ||||||||||||| |||||| |||||||||| | ||||  |||| ||||    
T  20004089 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtgtattgtacgcagccttaccttgtttttta 20004188  T
Q  172 gacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc 233  Q
     || |||||||||||| || |||||||||  || |||| || |||| ||||||||||||||||    
T  20004189 cacgagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc 20004251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 88 - 233
Target Start/End: Original strand, 23768334 - 23768479
Alignment:
Q  88 tgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgtttc 187  Q
    ||||||||| |||| ||||||||||||| |||||| | ||||||||| ||||||| |||||||||| | ||||  |||| |||| |||||||||||||||    
T  23768334 tgcactaaagctcccgcatacgcagggtctgggaaggtgtcccacca-tttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttc 23768432  T
Q  188 tagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc 233  Q
     |  |||||||||| || |||| || |||| ||||||||||||||||    
T  23768433 catgacttgaacctgtgaccttacagtcacatgacaacaactttacc 23768479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 70 - 233
Target Start/End: Complemental strand, 27201811 - 27201646
Alignment:
Q  70 taaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccacca-ttttggtgcattgtacgcaactttactatgttct 168  Q
    ||||||||||||  ||  ||||||||| |||| ||||||||| |||  ||||| ||||||||||| |||||||| |||||||||| | ||||  ||||      
T  27201811 taaaaaagggcaacccaatgcactaaagctcccgcatacgcaaggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttc 27201712  T
Q  169 ttagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc 233  Q
    | | ||||||||||||||| || ||||||||| ||| ||||||| |||| ||||||||||||||||    
T  27201711 tgacacaagaggctgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttacc 27201646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 74 - 236
Target Start/End: Original strand, 35117765 - 35117930
Alignment:
Q  74 aaagggcagaccggtgcactaaatctcctgcat-acgcagggtttgggaaagggtcccaccatttt-ggtgcattgtacgcaactttactatgttcttta 171  Q
    |||||| || ||||||||||||| ||||||||| |||||||||  ||||| |||||||| |||||| |||| ||||||| || | ||||  |||  ||||    
T  35117765 aaagggaagcccggtgcactaaagctcctgcattacgcagggtccgggaaggggtcccatcatttttggtgtattgtacacagccttaccctgtatttta 35117864  T
Q  172 gacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgtt 236  Q
     |||||||||| |||| || |||||||||  || ||||||| ||||||||||||||||||||||||    
T  35117865 cacaagaggctatttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttaccgtt 35117930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 86 - 244
Target Start/End: Complemental strand, 47214655 - 47214498
Alignment:
Q  86 ggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgtt 185  Q
    ||||||||| | |||| ||||| ||||||| |||||| ||||||||||| ||||||| |||||||||||| ||||  |||  |||| ||||||| |||||    
T  47214655 ggtgcactagagctcccgcatatgcagggtctgggaaggggtcccacca-tttggtgtattgtacgcaaccttaccctgt--tttaaacaagagactgtt 47214559  T
Q  186 tctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaaa 244  Q
    || || |||||||||  || ||||||| |||| |||||||||||||||| |||||||||||    
T  47214558 tccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaa 47214498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 72 - 243
Target Start/End: Complemental strand, 50812100 - 50811928
Alignment:
Q  72 aaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatg-ttcttt 170  Q
    ||||||||||| || ||||| |||| |||| ||||||||||||   ||||| |||||| |||||||||||| |||||||||||| ||||  || || |||    
T  50812100 aaaaagggcagcccagtgcattaaagctcccgcatacgcagggcgcgggaaggggtcc-accattttggtgtattgtacgcaaccttaccctgttttttt 50812002  T
Q  171 agacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
    | |||||| |||||||| || || |||  |  || ||||||| |||||||||||||||||||||||||||||||    
T  50812001 acacaagaagctgtttccaggacatgattccgtgacctttcagtcacgtgacaacaactttaccgttgcgccaa 50811928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 71 - 187
Target Start/End: Complemental strand, 23796626 - 23796511
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttt 170  Q
    |||||||||||| ||||||||||||| |||| ||||| ||||||| |||||| ||||| ||||| ||||||| |||||||||||| ||||  || | |||    
T  23796626 aaaaaagggcagcccggtgcactaaagctccagcatatgcagggtctgggaaggggtctcacca-tttggtgtattgtacgcaaccttacattgattttt 23796528  T
Q  171 agacaagaggctgtttc 187  Q
    | |||||||||||||||    
T  23796527 acacaagaggctgtttc 23796511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 70 - 233
Target Start/End: Original strand, 46247949 - 46248112
Alignment:
Q  70 taaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctt 169  Q
    ||||||||||||  ||||| ||||||| |||| |||||||||||||  ||||| ||||||||||| ||||||| ||||||||||   ||||  |||| ||    
T  46247949 taaaaaagggcaacccggtacactaaagctcccgcatacgcagggtccgggaaggggtcccacca-tttggtgtattgtacgcagtcttaccctgttttt 46248047  T
Q  170 tagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc 233  Q
    || ||||||||||||||| |  |||||||||  || | ||||| |||| ||||||||||||||||    
T  46248048 tacacaagaggctgtttccaagacttgaacccgtgacatttcagtcacatgacaacaactttacc 46248112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 98 - 232
Target Start/End: Original strand, 25468287 - 25468421
Alignment:
Q  98 ctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgtttctagaacttga 197  Q
    |||| ||||||||||||| ||||||  ||||| ||||||| |||| |||||||||||| ||||  || | |||| |||||||| |||||| || ||||||    
T  25468287 ctcccgcatacgcagggtctgggaagaggtccaaccattt-ggtgtattgtacgcaaccttaccctgatttttacacaagaggttgtttccaggacttga 25468385  T
Q  198 acctatg-cctttcaatcacgtgacaacaactttac 232  Q
    ||| ||| |||||||||||| |||||||||||||||    
T  25468386 acccatgacctttcaatcacatgacaacaactttac 25468421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 71 - 243
Target Start/End: Complemental strand, 19701732 - 19701559
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttt 170  Q
    ||||||||| || | ||||||||||| |||| |||||||||||||  ||||| ||| ||||||||||||||| ||||||| || | |||| | ||| |||    
T  19701732 aaaaaagggtagcctggtgcactaaagctcccgcatacgcagggtccgggaaggggccccaccattttggtgtattgtacccatccttaccaagtttttt 19701633  T
Q  171 agacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
    | ||||||||||||||  |  |||| ||||  || | ||||| ||||  |||||||||||||| ||||||||||    
T  19701632 acacaagaggctgttttcatgacttaaacccgtgacatttcagtcacacgacaacaactttactgttgcgccaa 19701559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 73 - 233
Target Start/End: Complemental strand, 27474439 - 27474280
Alignment:
Q  73 aaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttag 172  Q
    |||||||||  ||||||||||||| |||| |||||||||||||  ||||| ||||||||||| ||  ||| |||||||||| |||| |  |||| ||||     
T  27474439 aaaagggcaatccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca-ttcagtgtattgtacgcagctttgccctgtt-tttac 27474342  T
Q  173 acaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc 233  Q
    ||||||| ||||||| |  |||||||||| || ||||||| |||| ||||||||||||||||    
T  27474341 acaagagactgtttccaagacttgaacctgtgacctttcagtcacatgacaacaactttacc 27474280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 85 - 243
Target Start/End: Original strand, 30395737 - 30395898
Alignment:
Q  85 cggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatt-ttggtgcattgtacgcaactttactatgttctttagacaagaggctg 183  Q
    |||||||||||| |||| ||||| || ||||  ||||| ||||||||||||| |||||| |||||||||| | ||||  |||| |||| |||||||||||    
T  30395737 cggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctg 30395836  T
Q  184 tttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    |||| || |||||||||  || ||||  | |||| |||||||||||||||| ||||||||||    
T  30395837 tttccaggacttgaacccgtgaccttaaagtcacatgacaacaactttaccagttgcgccaa 30395898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 73 - 243
Target Start/End: Original strand, 34725097 - 34725266
Alignment:
Q  73 aaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttag 172  Q
    |||||||||  ||||||||||| | |||| ||||| |||||||  ||||| ||||||||||| ||| ||| |||||||||| | ||||  |||  ||||     
T  34725097 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca-tttagtgtattgtacgcagccttaccctgt--tttac 34725193  T
Q  173 acaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    ||||||||||||||| || |||||||||  || ||||||| |||| |||||||||||||||| ||||||||||    
T  34725194 acaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaa 34725266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 71 - 243
Target Start/End: Complemental strand, 45402257 - 45402083
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgc--aactt-tactatgttc 167  Q
    ||||| |||||  ||||||||||||| |||| ||||||||||||| |||||| ||||||||||| ||||||| |||||||||  |||||  ||  ||||     
T  45402257 aaaaacgggcaacccggtgcactaaagctcccgcatacgcagggtctgggaaggggtcccacca-tttggtgtattgtacgcagaacttgaaccctgtt- 45402160  T
Q  168 tttagacaagaggctgtttctagaacttgaacctatgcctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    |||| ||||||||||||||| || |||||||||  |  | ||| ||||| |||||||||||||||| ||||||||||    
T  45402159 tttacacaagaggctgtttccaggacttgaacccgttaccttccatcacatgacaacaactttaccagttgcgccaa 45402083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 77 - 243
Target Start/End: Original strand, 39214961 - 39215128
Alignment:
Q  77 gggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaa 176  Q
    |||||| ||||||||||||| || |  ||||||||||||||||||| ||| |||||||||||||   |||||||||| | ||||   ||| |||| ||||    
T  39214961 gggcagcccggtgcactaaagcttccacatacgcagggtttgggaaggggacccaccattttggaatattgtacgcagccttacccagttttttacacaa 39215060  T
Q  177 gaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
    |||| |||||| || |||||||| |  | ||||| | ||||||||||| |||||||| |||| |||||    
T  39215061 gaggttgtttccagtacttgaacttgggaccttttagtcacgtgacaataactttactgttgtgccaa 39215128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 86 - 220
Target Start/End: Original strand, 45264411 - 45264546
Alignment:
Q  86 ggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgtt 185  Q
    ||||||||||| |||| ||||| ||||||| || ||| ||||||||||||||||||| |||| || || | ||||| |||| |||  |||||||| ||||    
T  45264411 ggtgcactaaagctcccgcatatgcagggtctgagaaggggtcccaccattttggtgtattgcacacagccttactctgttttttgcacaagaggttgtt 45264510  T
Q  186 tctagaacttgaacctatg-cctttcaatcacgtga 220  Q
    || || |||||||| | || ||||||||||||||||    
T  45264511 tccaggacttgaacatgtgacctttcaatcacgtga 45264546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 68 - 233
Target Start/End: Complemental strand, 46991968 - 46991803
Alignment:
Q  68 cttaaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttc 167  Q
    |||||||| |||||  ||||||||||||| ||||  ||||||||||||  ||||| ||||||||||| || |||| ||||||| || | ||||  ||||     
T  46991968 cttaaaaatgggcaacccggtgcactaaagctcccacatacgcagggtccgggaaggggtcccacca-ttcggtgtattgtacacagccttaccctgttt 46991870  T
Q  168 tttagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc 233  Q
    |||| |||||||| |||||| || |||||||||  || |||| || |||| ||||||||||||||||    
T  46991869 tttacacaagaggttgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc 46991803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 72 - 243
Target Start/End: Complemental strand, 20036380 - 20036209
Alignment:
Q  72 aaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgt-tcttt 170  Q
    |||||| |||| ||||||||| ||| ||||||||||||||||||  ||||| |||| ||||||||| |||| |||| ||||||  ||||  | | |||||    
T  20036380 aaaaagagcagcccggtgcacaaaa-ctcctgcatacgcagggtccgggaaggggttccaccattt-ggtgtattgaacgcaatcttaccctttctcttt 20036283  T
Q  171 agacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
    | |||||||  |||||| || |||||||||  || ||||||| |||| |||||||||||||||| |||||||||    
T  20036282 acacaagagtttgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccattgcgccaa 20036209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 71 - 243
Target Start/End: Complemental strand, 35019390 - 35019219
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttt 170  Q
    |||||| ||||| ||||||||||||| |||  ||||||||||||| |||||  ||||||||||| || |||| |||||| ||| | |||   || | |||    
T  35019390 aaaaaatggcagcccggtgcactaaagctctcgcatacgcagggtctgggag-gggtcccaccaatt-ggtgtattgtatgcagccttatactgattttt 35019293  T
Q  171 agacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
    | |||||||| |||||  || ||||||| || || ||||||| ||| |||||||||||||||||||||||||||    
T  35019292 atacaagaggttgtttacaggacttgaatctgtgacctttcagtcatgtgacaacaactttaccgttgcgccaa 35019219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 69 - 232
Target Start/End: Original strand, 38478277 - 38478438
Alignment:
Q  69 ttaaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttct 168  Q
    |||||||||||||  ||||||||||| | |||| ||||| |||||||  | ||| |||| |||||| ||||||| |||||||||| | ||||  |||  |    
T  38478277 ttaaaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgagaaggggttccacca-tttggtgtattgtacgcagccttaccctgt--t 38478373  T
Q  169 ttagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttac 232  Q
    ||| |||||||||||||||||| |||||||||  || ||||||| |||| ||||||||| |||||    
T  38478374 ttacacaagaggctgtttctaggacttgaacccgtgacctttcagtcacatgacaacaagtttac 38478438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 73 - 233
Target Start/End: Original strand, 41319805 - 41319965
Alignment:
Q  73 aaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttag 172  Q
    |||||||||  || ||||||| || |||| ||||| | |||||| ||||| |||||||| ||||| |||| |||||||||| | ||||  |||| ||||     
T  41319805 aaaagggcaacccagtgcactgaaactcccgcatatgaagggttcgggaaggggtcccatcattt-ggtgtattgtacgcagccttaccctgttttttac 41319903  T
Q  173 acaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc 233  Q
    ||||||| ||||||| || |||| ||||| || ||||||| |||| ||||||||||||||||    
T  41319904 acaagagactgtttccaggacttaaacctgtgacctttcagtcacatgacaacaactttacc 41319965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 72 - 160
Target Start/End: Complemental strand, 6358282 - 6358194
Alignment:
Q  72 aaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttac 160  Q
    ||||||||||| || |  |||||||  ||||||||||||||||| |||||| |||||||||||||||||||  ||||||||| ||||||    
T  6358282 aaaaagggcagccccgatcactaaagatcctgcatacgcagggtctgggaaggggtcccaccattttggtgttttgtacgcagctttac 6358194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 136 - 243
Target Start/End: Original strand, 18724606 - 18724714
Alignment:
Q  136 tttggtgcattgtacgcaactttactatgttctttagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccg 234  Q
    ||||||| ||||||| || | ||||  |||| |||| ||||||||||||||| || |||||||||  || ||||||| |||| |||||||||||||||||    
T  18724606 tttggtgtattgtacacagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccg 18724705  T
Q  235 ttgcgccaa 243  Q
    |||||||||    
T  18724706 ttgcgccaa 18724714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 72 - 243
Target Start/End: Complemental strand, 22327256 - 22327088
Alignment:
Q  72 aaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttta 171  Q
    ||||| ||||| ||||||||| ||| |||| |||||| ||| ||| |||||     |||||||||||||||||| |||| || | ||||  |||| ||||    
T  22327256 aaaaaaggcagcccggtgcaccaaagctcccgcatacacagagttcgggaac----cccaccattttggtgcatcgtacacagccttaccctgtttttta 22327161  T
Q  172 gacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
     |||||||| |||||| || |||||||||   | ||||||| |||| ||||||||||||| ||||||||||||    
T  22327160 cacaagaggttgtttccaggacttgaacccgcgacctttcagtcacatgacaacaactttgccgttgcgccaa 22327088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 71 - 243
Target Start/End: Original strand, 45812534 - 45812705
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttt 170  Q
    |||||| ||||  ||||||||||| | |||| ||||| |||||||||||||| ||||||||||| ||||||| |||||| ||| | ||||  | |  |||    
T  45812534 aaaaaaaggcaacccggtgcactagagctcccgcatatgcagggtttgggaaggggtcccacca-tttggtgtattgtatgcagccttaccctct--ttt 45812630  T
Q  171 agacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaacttta-ccgttgcgccaa 243  Q
    | ||||||| ||||||  || |||||||||| || ||||||| |||| |||||||||||||| | ||||||||||    
T  45812631 acacaagagactgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttatcagttgcgccaa 45812705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 71 - 153
Target Start/End: Original strand, 1517308 - 1517389
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgca 153  Q
    |||||||||||  ||||||||||||| |||||||||||||||||| || ||| |||||||||||  |||||| ||||||||||    
T  1517308 aaaaaagggcaacccggtgcactaaagctcctgcatacgcagggtctgagaaggggtcccacca-attggtgtattgtacgca 1517389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 73 - 187
Target Start/End: Original strand, 19656104 - 19656218
Alignment:
Q  73 aaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttag 172  Q
    |||||||||| |||||||| |||| ||| |||||| |||||||    |||||||||| |||||||||||| |||||||  | | |||| ||||| ||||     
T  19656104 aaaagggcagcccggtgcattaaagctcttgcatatgcagggtccaagaaagggtcctaccattttggtgtattgtacatagcgttaccatgttttttac 19656203  T
Q  173 acaagaggctgtttc 187  Q
    |||||||||||||||    
T  19656204 acaagaggctgtttc 19656218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 73 - 186
Target Start/End: Complemental strand, 35005284 - 35005170
Alignment:
Q  73 aaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccacca-ttttggtgcattgtacgcaactttactatgttcttta 171  Q
    |||||||||  ||||||||||||| | || |||||||||||||  ||||| ||||||||||| |||||||| |||||| ||| | ||||  |||| ||||    
T  35005284 aaaagggcaacccggtgcactaaagcgcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtatgcagccttaccctgtttttta 35005185  T
Q  172 gacaagaggctgttt 186  Q
     ||||||||||||||    
T  35005184 cacaagaggctgttt 35005170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 84 - 230
Target Start/End: Complemental strand, 9939612 - 9939463
Alignment:
Q  84 ccggtgcactaaatctcctgcatacgcagggtttgggaa-agggtcccacca-ttttggtgcattgtacgcaactttactatgttctttagacaagaggc 181  Q
    ||||||||||||| |||| |||||||||||||  | |||  ||||||||||| |||||||| |||| ||||||| |||| |||||  ||| ||||||||     
T  9939612 ccggtgcactaaagctcccgcatacgcagggtccgagaagggggtcccaccatttttggtgtattgcacgcaaccttaccatgtttcttaaacaagaggt 9939513  T
Q  182 tgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaacttt 230  Q
    |||||| || ||||||||   || ||||||| |||| |||||||||||||    
T  9939512 tgtttccaggacttgaactcgtgacctttcagtcacatgacaacaacttt 9939463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 72 - 200
Target Start/End: Original strand, 35253185 - 35253310
Alignment:
Q  72 aaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttta 171  Q
    ||||||||||  ||||||||||| | |||| ||||| |||||||  ||||| ||||||||||| ||||||| |||||||||| | ||||  |||  ||||    
T  35253185 aaaaagggcaatccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgt--ttta 35253281  T
Q  172 gacaagaggctgtttctagaacttgaacc 200  Q
     ||||||||||||||| || |||||||||    
T  35253282 cacaagaggctgtttcgaggacttgaacc 35253310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 74 - 153
Target Start/End: Complemental strand, 4349796 - 4349718
Alignment:
Q  74 aaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgca 153  Q
    ||||||||  ||||||||||||| |||| |||||||||||||  ||||| ||||||||||| ||||||| ||||||||||    
T  4349796 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca-tttggtgtattgtacgca 4349718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 98 - 243
Target Start/End: Complemental strand, 11596646 - 11596502
Alignment:
Q  98 ctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgtttctagaacttga 197  Q
    |||| |||||||||||||   |||| |||||||||||||| |||| ||| |||||| | ||||  |||| |||| |||||||| ||||||||| ||||||    
T  11596646 ctcccgcatacgcagggtccaggaaggggtcccaccattt-ggtgtattatacgcagccttaccctgtt-tttacacaagaggttgtttctaggacttga 11596549  T
Q  198 acctatgcc-tttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
    |||  || | ||||| |||| ||||| | ||||||||||||||||||    
T  11596548 acccgtgacatttcagtcacatgacagccactttaccgttgcgccaa 11596502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 84 - 153
Target Start/End: Original strand, 18741967 - 18742037
Alignment:
Q  84 ccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccacca-ttttggtgcattgtacgca 153  Q
    ||||||||||||| |||  ||||||||||||| |||||| ||||||||||| |||||||| ||||||||||    
T  18741967 ccggtgcactaaagctctcgcatacgcagggtctgggaaggggtcccaccatttttggtgtattgtacgca 18742037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 73 - 233
Target Start/End: Complemental strand, 19414596 - 19414438
Alignment:
Q  73 aaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttag 172  Q
    |||||||||  ||||||||||| | |||| ||||| |||||||  ||||| ||||||||||| ||||||| |||||||||| | |||   |||  ||||     
T  19414596 aaaagggcaacccggtgcactagagctcccgcatatgcagggtacgggaaggggtcccacca-tttggtgtattgtacgcagccttaacctgt--tttac 19414500  T
Q  173 acaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc 233  Q
    | |||||||| ||||||| |||||||||  || ||||||| |||  ||||||||||||||||    
T  19414499 ataagaggctctttctaggacttgaacccgtgacctttcagtcatatgacaacaactttacc 19414438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 233
Target Start/End: Complemental strand, 6925247 - 6925099
Alignment:
Q  85 cggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgt 184  Q
    |||||||||||| |||| ||||||||||||   ||||| ||||||||||| || |||| ||||| |||| | ||||  | || |||| |||||||||| |    
T  6925247 cggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccacca-ttcggtgtattgtccgcagccttaccctattttttacacaagaggctat 6925149  T
Q  185 ttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc 233  Q
    ||| || |||||||||  || |||| || |||| ||||||||||||||||    
T  6925148 ttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc 6925099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 243
Target Start/End: Original strand, 19932781 - 19932922
Alignment:
Q  102 tgcatacgcagggtttgggaaagggtcccacca-ttttggtgcattgtacgcaactttactatgttctttagacaagaggctgtttctagaacttgaacc 200  Q
    ||||||||||||||  ||||| ||||||||||| |||||||| |||||||||| | ||||  |||| |||| |||| ||| ||| ||   ||||||||||    
T  19932781 tgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttacacaa-aggttgtatc--caacttgaacc 19932877  T
Q  201 tatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
     ||| ||||||| |||| |||||||||||||||| ||||||||||    
T  19932878 catgacctttcagtcacatgacaacaactttaccagttgcgccaa 19932922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 124 - 243
Target Start/End: Complemental strand, 33223092 - 33222972
Alignment:
Q  124 gggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgaca 222  Q
    ||||||||||||||||||| |||||||||||| || |  |||| |||| ||||||||||||||| |  |||| || |  || ||||||| |||| |||||    
T  33223092 gggtcccaccattttggtgtattgtacgcaacctttccctgtt-tttacacaagaggctgtttccatgacttaaatccgtgacctttcagtcacatgaca 33222994  T
Q  223 acaactttacc-gttgcgccaa 243  Q
    ||||||||||| ||||||||||    
T  33222993 acaactttaccggttgcgccaa 33222972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 72 - 160
Target Start/End: Original strand, 42304205 - 42304294
Alignment:
Q  72 aaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccacca-ttttggtgcattgtacgcaactttac 160  Q
    ||||||||||  ||||||||||||| ||||  ||||||||||||  ||||| ||||||||||| |||| ||| |||||||||||| ||||    
T  42304205 aaaaagggcaatccggtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattttttgtgtattgtacgcaaccttac 42304294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 84 - 243
Target Start/End: Original strand, 44485120 - 44485278
Alignment:
Q  84 ccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctg 183  Q
    ||||||||| ||| |||| ||||||| ||| |  ||||| |||||| ||||||| |||| |||||||||| | |||| ||||  |||| ||||| || ||    
T  44485120 ccggtgcac-aaagctcccgcatacgtaggatccgggaaggggtccaaccattt-ggtgtattgtacgcagccttaccatgtcttttacacaagtggttg 44485217  T
Q  184 tttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
    |||| || |||  ||||  || |||||||||||| ||||||||||||||| ||||||||||    
T  44485218 tttccaggactataacccgtgacctttcaatcacatgacaacaactttactgttgcgccaa 44485278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 87 - 232
Target Start/End: Original strand, 12126850 - 12126993
Alignment:
Q  87 gtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgttt 186  Q
    |||||||| | |||| ||||| |||||||  ||||| ||||||||| |||| |||| |||||||||| | ||||  ||||  ||| |||||| |||||||    
T  12126850 gtgcactacagctcccgcatatgcagggtccgggaaggggtcccacaattt-ggtgtattgtacgcagccttaccctgtt--ttacacaagaagctgttt 12126946  T
Q  187 ctagaacttgaacctatg-cctttcaatcacgtgacaacaactttac 232  Q
    | ||||||| ||||  || ||||||||| || |||||||||||||||    
T  12126947 ccagaacttaaacccgtgacctttcaattacatgacaacaactttac 12126993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 76 - 243
Target Start/End: Original strand, 15511150 - 15511320
Alignment:
Q  76 agggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgta--cgcaactttactatgttctttaga 173  Q
    ||||||| ||||||||||||| |||   ||||||||||||   |||| |||| |||||||||||||| ||||||  |||| | ||||  |||| |||| |    
T  15511150 agggcagcccggtgcactaaagctcacacatacgcagggtccaggaaggggtaccaccattttggtgtattgtatccgcagccttaccctgttttttaca 15511249  T
Q  174 caagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
    |||||||| ||||| || |||| ||  | || |||||||  ||| | |||||||||||||| |||||||||    
T  15511250 caagaggcggtttccaggacttcaatatgtgacctttcagccacattacaacaactttaccattgcgccaa 15511320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 134
Target Start/End: Complemental strand, 43768300 - 43768237
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccacca 134  Q
    |||||||||||| |||||||| |||| |||| | ||||||||||| |||||| |||||||||||    
T  43768300 aaaaaagggcagcccggtgcattaaagctcccgtatacgcagggtctgggaaggggtcccacca 43768237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 138
Target Start/End: Complemental strand, 50606564 - 50606497
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatttt 138  Q
    |||||||||||  ||||||||||||| |||| ||||| |||||||  ||||| |||||||||||||||    
T  50606564 aaaaaagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccatttt 50606497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 153
Target Start/End: Complemental strand, 15505724 - 15505644
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgca 153  Q
    |||||| |||||  |||||||| ||| |||| |||||||||||||| ||||| ||||||||||| ||||||| ||||||||||    
T  15505724 aaaaaaaggcagttcggtgcac-aaagctcccgcatacgcagggttcgggaaggggtcccacca-tttggtgtattgtacgca 15505644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 155
Target Start/End: Original strand, 19974073 - 19974155
Alignment:
Q  73 aaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaac 155  Q
    |||||||||| || |||||||||| |||| ||||||  || ||  ||||| |||||||| |||||||||| ||||||||||||    
T  19974073 aaaagggcagccccgtgcactaaagctcccgcatacatagagtccgggaatgggtcccatcattttggtgtattgtacgcaac 19974155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 119 - 243
Target Start/End: Original strand, 22930114 - 22930237
Alignment:
Q  119 ggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacg 217  Q
    |||| |||||||||||||| |||| ||||| | |||| ||||  |||| |||| |||| |||||||||| || ||||||||| ||| ||||||| ||||     
T  22930114 ggaaggggtcccaccattt-ggtgtattgt-cacaaccttaccctgtt-tttacacaaaaggctgtttccaggacttgaacccatgacctttcagtcaca 22930210  T
Q  218 tgacaacaactttacc-gttgcgccaa 243  Q
    |||||||||||||||| ||||||||||    
T  22930211 tgacaacaactttaccagttgcgccaa 22930237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 73 - 134
Target Start/End: Original strand, 33594130 - 33594191
Alignment:
Q  73 aaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccacca 134  Q
    ||||||| || || |||||||||| |||| ||||||||||||| |||||| |||||||||||    
T  33594130 aaaagggtagcccagtgcactaaagctcccgcatacgcagggtctgggaaggggtcccacca 33594191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 176 - 244
Target Start/End: Original strand, 49546008 - 49546077
Alignment:
Q  176 agaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgttgcgccaaa 244  Q
    ||||| |||||  ||||||||||||| |  |||||||  |||||||||||||||||||||||||||||||    
T  49546008 agaggttgttttaagaacttgaacctgtaacctttcagccacgtgacaacaactttaccgttgcgccaaa 49546077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 168 - 243
Target Start/End: Original strand, 2435986 - 2436062
Alignment:
Q  168 tttagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
    |||| ||| |||| |||||| || |||||||||  || ||||||| |||||||||||||||||||||||||| ||||    
T  2435986 tttacacaggaggttgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttaccgttgcaccaa 2436062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 229
Target Start/End: Complemental strand, 8197204 - 8197046
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttt 170  Q
    |||||||||||  ||||| ||||||| ||||  ||||||||||||  | ||| |||||| |||| ||||||| | |||||| | | |||| ||||| |||    
T  8197204 aaaaaagggcaacccggtacactaaagctccaacatacgcagggtccgagaaggggtcctacca-tttggtgtactgtacgtagccttaccatgtttttt 8197106  T
Q  171 agacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactt 229  Q
    | |||||||||  || | || |||||||||  || ||||||| |||| ||||||||||||    
T  8197105 acacaagaggcaattaccaggacttgaacccgtgacctttcagtcacatgacaacaactt 8197046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 243
Target Start/End: Complemental strand, 43207513 - 43207478
Alignment:
Q  208 ttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
    |||| |||||||||||||||||||||||||||||||    
T  43207513 ttcagtcacgtgacaacaactttaccgttgcgccaa 43207478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 243
Target Start/End: Original strand, 10378856 - 10378894
Alignment:
Q  205 cctttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
    ||||||| |||||||||||||||||||||||||| ||||    
T  10378856 cctttcagtcacgtgacaacaactttaccgttgcaccaa 10378894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 128
Target Start/End: Original strand, 25554742 - 25554796
Alignment:
Q  74 aaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtc 128  Q
    ||||||||| ||||||||||||  |||| |||||||||||||| ||||| |||||    
T  25554742 aaagggcagtccggtgcactaatgctcccgcatacgcagggttcgggaaggggtc 25554796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 137
Target Start/End: Complemental strand, 30555276 - 30555210
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattt 137  Q
    |||||||| ||| ||||||||||||| |||  |||||||||||||  | ||| ||||||||||||||    
T  30555276 aaaaaaggtcagcccggtgcactaaagctctcgcatacgcagggtccgtgaaggggtcccaccattt 30555210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 153
Target Start/End: Complemental strand, 46859228 - 46859146
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgca 153  Q
    ||||||||| || ||||||||||||| ||||  |||||||| ||  ||  || | ||||||||||||||||| ||||||||||    
T  46859228 aaaaaagggaagcccggtgcactaaaactcccacatacgcaaggcctgaaaatgagtcccaccattttggtgtattgtacgca 46859146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 22151562 - 22151505
Alignment:
Q  175 aagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaacttta 231  Q
    ||||||||||||| |||||||||||||||| |||| || |||  ||||||||||||||    
T  22151562 aagaggctgtttccagaacttgaacctatgaccttacagtcagatgacaacaacttta 22151505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 153
Target Start/End: Original strand, 31442399 - 31442468
Alignment:
Q  84 ccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgca 153  Q
    ||||||||| ||| ||||  ||||| ||| ||  ||||| ||||||||||||||||||| ||||||||||    
T  31442399 ccggtgcaccaaagctcccacatacacagtgtccgggaaggggtcccaccattttggtgtattgtacgca 31442468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 41440599 - 41440668
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttgg 140  Q
    |||||||||||| ||||| ||||||| |||| |||||| ||| || | |||| |||| ||||||||||||    
T  41440599 aaaaaagggcagtccggttcactaaagctcccgcatacacagagtctaggaaggggttccaccattttgg 41440668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 238
Target Start/End: Original strand, 43981964 - 43981997
Alignment:
Q  205 cctttcaatcacgtgacaacaactttaccgttgc 238  Q
    |||||||||||||| |||||||||||||||||||    
T  43981964 cctttcaatcacgtaacaacaactttaccgttgc 43981997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 121
Target Start/End: Original strand, 50760238 - 50760287
Alignment:
Q  72 aaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttggga 121  Q
    ||||||||||| |||||||| |||| |||| |||||||||||||| ||||    
T  50760238 aaaaagggcagcccggtgcattaaagctcccgcatacgcagggttcggga 50760287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 52910275 - 52910206
Alignment:
Q  175 aagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
    ||||||||||||| |  | |||||||| || ||||||| |||| ||||||||||||||||||||| ||||    
T  52910275 aagaggctgtttccaagagttgaacctgtgacctttcagtcacatgacaacaactttaccgttgcaccaa 52910206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 36 - 64
Target Start/End: Original strand, 698788 - 698816
Alignment:
Q  36 taagggaaatgttaacaagtgcccttagg 64  Q
    |||||||||||||||||||||||||||||    
T  698788 taagggaaatgttaacaagtgcccttagg 698816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 77 - 153
Target Start/End: Original strand, 10378738 - 10378813
Alignment:
Q  77 gggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgca 153  Q
    |||||| ||||||||||||| |||| ||||| |||||||    ||| ||||||||||| ||||||| ||||||||||    
T  10378738 gggcagcccggtgcactaaagctcccgcatatgcagggtccaagaaggggtcccacca-tttggtgtattgtacgca 10378813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 73 - 153
Target Start/End: Original strand, 20999849 - 20999928
Alignment:
Q  73 aaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgca 153  Q
    |||||||||| ||||||||||||| |||| || ||||||||||   |||| ||| |||| || ||||||| ||||||||||    
T  20999849 aaaagggcagcccggtgcactaaagctcccgcgtacgcagggtgccggaaggggccccatca-tttggtgtattgtacgca 20999928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 187
Target Start/End: Original strand, 31382211 - 31382325
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttt 170  Q
    |||||||||||  ||||| || |||| |||| ||||| |||||||   |||| ||||||||||| ||||||| |||||||||| | |||   |||| |||    
T  31382211 aaaaaagggcaacccggtacagtaaagctcccgcatatgcagggtccaggaaggggtcccacca-tttggtgtattgtacgcagccttatcctgtt-ttt 31382308  T
Q  171 agacaagaggctgtttc 187  Q
    | |||||||||||||||    
T  31382309 acacaagaggctgtttc 31382325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 3e-27; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 69 - 238
Target Start/End: Complemental strand, 35567310 - 35567141
Alignment:
Q  69 ttaaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttct 168  Q
    |||||||||||||| ||||||||||||| |||| ||| |||||||||| ||||| ||||||||||| |||||||  |||||| || | ||||  |||| |    
T  35567310 ttaaaaaagggcagcccggtgcactaaagctcccgcagacgcagggttcgggaaggggtcccacca-tttggtgtgttgtacacagccttaccctgtttt 35567212  T
Q  169 ttagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgttgc 238  Q
    ||| ||||| ||||||||| |  ||||||||| ||| ||||||| | || |||||||||||||||||||||    
T  35567211 ttacacaagtggctgtttccaagacttgaacccatgacctttcagttacatgacaacaactttaccgttgc 35567141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 71 - 187
Target Start/End: Original strand, 20639655 - 20639771
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttt 170  Q
    |||||||||||  ||||||||||||| |||| |||||||||||||  ||||| ||||||||||||||||||| |||||||||| | ||||  |||| |||    
T  20639655 aaaaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattttggtgtattgtacgcagccttaccctgtttttt 20639754  T
Q  171 agacaagaggctgtttc 187  Q
    | |||||||||||||||    
T  20639755 acacaagaggctgtttc 20639771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 71 - 243
Target Start/End: Original strand, 20908633 - 20908807
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttt 170  Q
    |||||||||||| |  |||||||||| |||| |||||||||||||| ||||| ||||||||||||||||||| |||||||||| | ||||  | || |||    
T  20908633 aaaaaagggcagccttgtgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattttggtgtattgtacgcagccttaccttctttttt 20908732  T
Q  171 agacaagaggctgtttctagaacttgaacctatgcc--tttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
    ||| |||| | |||||| |  |||||||| | |  |  ||||| |||| |||||||||||||||||||| |||||    
T  20908733 agaaaagacgatgtttccatgacttgaacatgtaacattttcagtcacatgacaacaactttaccgttgtgccaa 20908807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 87 - 198
Target Start/End: Complemental strand, 21489210 - 21489099
Alignment:
Q  87 gtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgttt 186  Q
    |||||| ||| |||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||   ||||| |||| ||||  |||||||||||||    
T  21489210 gtgcacgaaagctcccgcatacgcagggttcgggaaggggtcccaccattttggtgcattgtacgcagtcttactctgttttttacgcaagaggctgttt 21489111  T
Q  187 ctagaacttgaa 198  Q
    | || |||||||    
T  21489110 ccaggacttgaa 21489099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 84 - 243
Target Start/End: Complemental strand, 21647091 - 21646929
Alignment:
Q  84 ccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatt-ttggtgcattgtacgcaactttactatgttctttagacaagaggct 182  Q
    ||||||||||||| |||| ||||| || |||| |||||| ||||||||||||| |||||  |||||||||| | ||||  | || |||| ||||||||||    
T  21647091 ccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtatattgtacgcagccttaccctattttttacacaagaggct 21646992  T
Q  183 gtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    ||||| || |||||||||| || |||| || |||| |||||||||||||||| ||||||||||    
T  21646991 gtttccaggacttgaacctgtgaccttccagtcacatgacaacaactttaccagttgcgccaa 21646929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 77 - 243
Target Start/End: Complemental strand, 36589876 - 36589710
Alignment:
Q  77 gggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaa 176  Q
    |||||| ||||||||| ||| |||| ||||||  ||||||  |||| ||||||||||||||||||| | |||   || | |||| ||||| |||| ||||    
T  36589876 gggcagcccggtgcaccaaagctcccgcatacatagggttcaggaaggggtcccaccattttggtgtactgtcaacagcattaccatgttttttacacaa 36589777  T
Q  177 gaggctgtttctagaacttgaacctatgcctttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
    ||||||||||| || ||||||||||   | ||||| ||| |||||| ||||||||||||||||||||    
T  36589776 gaggctgtttccaggacttgaacctggacgtttcagtcatgtgacatcaactttaccgttgcgccaa 36589710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 92 - 242
Target Start/End: Original strand, 49938611 - 49938759
Alignment:
Q  92 ctaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgtttctaga 191  Q
    ||||| |||| ||||| ||||||| |||||| ||||||||||||||||||| |||||||   || ||||   ||| |||| ||||||||||||||| ||     
T  49938611 ctaaagctcccgcatatgcagggtatgggaaggggtcccaccattttggtgtattgtac---accttaccccgtt-tttacacaagaggctgtttccagg 49938706  T
Q  192 acttgaacctatg-cctttcaatcacgtgacaacaac-tttaccgttgcgcca 242  Q
    |||||||||| || ||||||| ||||||||||||||| |||||||||||||||    
T  49938707 acttgaacctgtgacctttcagtcacgtgacaacaacttttaccgttgcgcca 49938759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 72 - 243
Target Start/End: Complemental strand, 5648395 - 5648224
Alignment:
Q  72 aaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttta 171  Q
    ||||||||||  || ||||||| || |||| |||||||||||||  ||||| ||||||||||| ||||||| |||||||||| | ||||  |||| ||||    
T  5648395 aaaaagggcaacccagtgcactgaagctcccgcatacgcagggtccgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgtt-ttta 5648298  T
Q  172 gacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
     ||||||||||||||| || |||||||||  || |||| || |||| |||||||||||||||| ||||||||||    
T  5648297 cacaagaggctgtttccaggacttgaacccgtgaccttacagtcacatgacaacaactttaccagttgcgccaa 5648224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 74 - 243
Target Start/End: Complemental strand, 20225117 - 20224949
Alignment:
Q  74 aaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttaga 173  Q
    ||||||||  ||||||||||| | |||| ||||| |||||||  ||||| ||||||||||| ||||||| |||||||||| | ||||  |||  |||| |    
T  20225117 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgt--tttaca 20225021  T
Q  174 caagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    ||||||| |||||| || ||||||||| ||| ||||||| |||| |||||||||||||||| ||||||||||    
T  20225020 caagaggttgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttaccagttgcgccaa 20224949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 71 - 243
Target Start/End: Complemental strand, 23501927 - 23501758
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatt-ttggtgcattgtacgcaactttactatgttctt 169  Q
    |||||||||||  ||||||||||||| |||| ||||| |||||||  ||||| ||||||||||||| |||||| |||||||||||| ||||  |||| ||    
T  23501927 aaaaaagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccctgttttt 23501828  T
Q  170 tagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    || ||||||||||||       |||||||||  || ||||||| |||| |||||||||||||||| ||||||||||    
T  23501827 tacacaagaggctgt------gacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaa 23501758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 71 - 243
Target Start/End: Original strand, 16408598 - 16408773
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatt-ttggtgcattgtacgcaactttactatgttctt 169  Q
    |||||||||||  ||||||||||||| |||| ||||| || ||||  ||||| |||| |||||||| |||||| ||||||||||   ||||  |||| ||    
T  16408598 aaaaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgttttt 16408697  T
Q  170 tagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    || ||||||||||||||| || |||||||||  || |||| || |||| |||||||||||||||| ||||||||||    
T  16408698 tacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaa 16408773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 71 - 229
Target Start/End: Original strand, 17043392 - 17043549
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttt 170  Q
    ||||| |||||| | |||||| |||| |||| ||||| ||||||| |||||| |||||||||||||| |||| |||||||||| | ||||  |||  |||    
T  17043392 aaaaaggggcagcctggtgca-taaagctccagcatatgcagggtctgggaaggggtcccaccattt-ggtgtattgtacgcagccttaccctgtatttt 17043489  T
Q  171 agacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactt 229  Q
    | ||||||||||||||| || |||||||||| || ||||||| |||| ||||||||||||    
T  17043490 acacaagaggctgtttccaggacttgaacctgtgacctttcagtcacttgacaacaactt 17043549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 78 - 244
Target Start/End: Original strand, 47441534 - 47441700
Alignment:
Q  78 ggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaag 177  Q
    ||||| |||||| || ||| ||||||| ||| ||||||  ||||| |||||| ||||||| |||| ||||||| || | ||||  || | |||| | |||    
T  47441534 ggcagtccggtggacgaaagctcctgcttactcagggtccgggaaggggtccaaccattt-ggtgtattgtacacagccttaccctgatttttacaaaag 47441632  T
Q  178 aggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgttgcgccaaa 244  Q
    || |||||||| | |||||||||| || ||||||| ||||||||||||||||||||||||||||||||    
T  47441633 agactgtttcttggacttgaacctgtgacctttcagtcacgtgacaacaactttaccgttgcgccaaa 47441700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 75 - 243
Target Start/End: Original strand, 6430627 - 6430795
Alignment:
Q  75 aagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagac 174  Q
    |||||||  ||||||| ||||| |||| |||||||||||||  |||||  |||||||||| ||||||| |||||||||| | ||||  |||| |||| ||    
T  6430627 aagggcaacccggtgcgctaaagctcccgcatacgcagggtccgggaagtggtcccacca-tttggtgtattgtacgcagccttaccctgtt-tttacac 6430724  T
Q  175 aagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    ||||||||||||| |  |||||||||  || ||||||| |||| |||||||||||||||| ||||||||||    
T  6430725 aagaggctgtttccatgacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaa 6430795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 72 - 243
Target Start/End: Original strand, 48598823 - 48598993
Alignment:
Q  72 aaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttta 171  Q
    ||||||||||  ||||||||||| | |||| ||||| ||| |||  ||||| ||||||||||| ||||||| |||||||||| | ||||  |||  ||||    
T  48598823 aaaaagggcaacccggtgcactagagctccggcatatgcatggtccgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgt--ttta 48598919  T
Q  172 gacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
     ||||||||||||||| || |||||||||  || ||||||| |||| |||||||||||||||| ||||||||||    
T  48598920 cacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaa 48598993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 73 - 243
Target Start/End: Complemental strand, 16911700 - 16911527
Alignment:
Q  73 aaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatt-ttggtgcattgtacgcaactttactatgttcttta 171  Q
    |||||||||  |||||  |||||| |||| || ||||||||||  ||||| ||||||||||||| |||||| |||||||||| | ||||  || | | ||    
T  16911700 aaaagggcaacccggtaaactaaagctcccgcgtacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgatttgta 16911601  T
Q  172 gacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
     |||||||||||||||||| |||||||||  || ||||| | |||| |||||||||||||||| ||||||||||    
T  16911600 cacaagaggctgtttctaggacttgaacccgtgacctttaagtcacatgacaacaactttaccagttgcgccaa 16911527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 74 - 233
Target Start/End: Original strand, 44363130 - 44363291
Alignment:
Q  74 aaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccacca-ttttggtgcattgtacgcaactttactatgttctttag 172  Q
    ||||||||  ||||||||||||| |||| |||||||||||||  ||||| ||||||||||| ||||||||| ||||||||| |  |||  |||| ||||     
T  44363130 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgcgttgtacgcagccctaccctgttttttac 44363229  T
Q  173 acaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc 233  Q
    ||| ||||||||||  || ||||||||   || ||||||| |||| ||||||||||||||||    
T  44363230 acacgaggctgttttcaggacttgaactcgtgacctttcagtcacatgacaacaactttacc 44363291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 73 - 186
Target Start/End: Original strand, 51865037 - 51865149
Alignment:
Q  73 aaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttag 172  Q
    |||||||||| |||||||| |||| |||| |||||||||||||  ||||| ||| ||||||| ||||||| |||||||||| | |||| ||||| ||||     
T  51865037 aaaagggcagtccggtgcaataaagctcccgcatacgcagggtccgggaaggggccccacca-tttggtgtattgtacgcagccttaccatgttttttac 51865135  T
Q  173 acaagaggctgttt 186  Q
    ||||||||||||||    
T  51865136 acaagaggctgttt 51865149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 71 - 233
Target Start/End: Original strand, 47528527 - 47528687
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttt 170  Q
    |||||||||||  ||||||||||| | ||||  ||||  ||||||  ||||| ||||||||||| ||||||| |||||||||| | ||||  |||  |||    
T  47528527 aaaaaagggcaacccggtgcactagagctcccacatattcagggtccgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgt--ttt 47528623  T
Q  171 agacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc 233  Q
    | ||||||||||||||| || |||||||||| || ||||||| |||| ||||||||||||||||    
T  47528624 acacaagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 47528687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 54175202 - 54175088
Alignment:
Q  72 aaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaaggg-tcccaccattttggtgcattgtacgcaactttactatgttcttt 170  Q
    ||||||||||| ||||||||||||| |||| ||||| |||||||  ||| ||||| |||||||||||||||| |||||||||| | ||||  |||| |||    
T  54175202 aaaaagggcagcccggtgcactaaagctcccgcatatgcagggtccggggaaggggtcccaccattttggtgtattgtacgcagccttaccctgtt-ttt 54175104  T
Q  171 agacaagaggctgttt 186  Q
    | ||||||||||||||    
T  54175103 acacaagaggctgttt 54175088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 77 - 243
Target Start/End: Complemental strand, 54967151 - 54966987
Alignment:
Q  77 gggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaa 176  Q
    |||||| ||||||||| ||| |||| ||||| | |||||  ||||| |||||||||||||| |||  |||||| ||||| ||||  |||| |||| ||||    
T  54967151 gggcagcccggtgcac-aaagctcccgcatatgtagggtacgggaaggggtcccaccattt-ggtatattgta-gcaaccttaccctgttttttacacaa 54967055  T
Q  177 gaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
    |||| | |||| ||||||||||| | || ||||||| |||| ||||||||||||||||||||||||||    
T  54967054 gaggttctttccagaacttgaacatgtgacctttcagtcacatgacaacaactttaccgttgcgccaa 54966987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 243
Target Start/End: Complemental strand, 25343327 - 25343153
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatttt-ggtgcattgtacgcaactttactatgttctt 169  Q
    ||||| |||||| | ||||| ||||| |||   |||||||||| | | |||| |||||| ||| |||| |||| |||||||||| | ||||  |||| ||    
T  25343327 aaaaaggggcagccgggtgctctaaagctctcacatacgcaggatctaggaaggggtccaaccctttttggtgtattgtacgcagccttaccctgttttt 25343228  T
Q  170 tagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
    || ||||||| || |||| ||||||||||||| || ||| ||| ||||||||||||||||||||| |||||||||    
T  25343227 tacacaagagactatttccagaacttgaacctgtgacctatcagtcacgtgacaacaactttaccattgcgccaa 25343153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 243
Target Start/End: Complemental strand, 30639517 - 30639345
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttt 170  Q
    |||||||||||  || |||||||||| |||| ||||| |||||||  ||||| ||||| ||||| ||||||| |||||||||| | ||||  |||| |||    
T  30639517 aaaaaagggcaacccagtgcactaaagctcccgcatatgcagggtccgggaaggggtctcacca-tttggtgtattgtacgcagccttaccctgtt-ttt 30639420  T
Q  171 agacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    | ||||||| ||||||| || |||||||||  || ||||||| ||||  ||||||||||||||| ||||||||||    
T  30639419 acacaagagtctgtttccaggacttgaaccagtgacctttcagtcacaagacaacaactttaccagttgcgccaa 30639345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 104 - 243
Target Start/End: Original strand, 5306694 - 5306833
Alignment:
Q  104 catacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgtttctagaacttgaacctat 203  Q
    ||||||||||||  ||||| ||||||||||| ||||||| |||||||||||| ||||  || | |||| ||||||||||||||| || |||||||||  |    
T  5306694 catacgcagggtccgggaaggggtcccacca-tttggtgtattgtacgcaaccttaccctgat-tttacacaagaggctgtttccaggacttgaacccgt 5306791  T
Q  204 g-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    | ||||||| |||| ||||| |||||||||| ||||||||||    
T  5306792 gacctttcagtcacatgacatcaactttaccagttgcgccaa 5306833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 71 - 200
Target Start/End: Complemental strand, 47444095 - 47443967
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttt 170  Q
    |||||||||||  || ||||||| || |||||||||| |||||||  ||||| ||||||||||| ||||||| |||||||||| | ||||  |||| |||    
T  47444095 aaaaaagggcaacccagtgcactgaagctcctgcatatgcagggtccgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgtttttt 47443997  T
Q  171 agacaagaggctgtttctagaacttgaacc 200  Q
    |  |||||||||||||| || |||||||||    
T  47443996 acgcaagaggctgtttccaggacttgaacc 47443967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 84 - 239
Target Start/End: Complemental strand, 19027973 - 19027818
Alignment:
Q  84 ccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctg 183  Q
    ||||||||||||| ||||  ||||||||| || ||| || ||||||||||| || |||| |||||||||| | ||||  |||| |||| |||||| | ||    
T  19027973 ccggtgcactaaagctcccacatacgcagagtctggaaaggggtcccaccaatt-ggtgtattgtacgcagccttaccctgttttttacacaagatgttg 19027875  T
Q  184 tttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgttgcg 239  Q
    |||| || |||||||||  || ||||||| |||||||||||||||| |||| |||||    
T  19027874 tttccaggacttgaacccgtgacctttcagtcacgtgacaacaactctaccattgcg 19027818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 75 - 233
Target Start/End: Complemental strand, 40915962 - 40915805
Alignment:
Q  75 aagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagac 174  Q
    |||||||  |||||||||| || |||| |||||||||||||  ||||| || |||||||| ||||||| |||||||||| | ||||  |||| |||| ||    
T  40915962 aagggcaatccggtgcactgaagctcccgcatacgcagggtccgggaagggctcccacca-tttggtgtattgtacgcagccttaccttgtt-tttacac 40915865  T
Q  175 aagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc 233  Q
    ||||||||||||| || |||||||||  || ||||  | |||| ||||||||||||||||    
T  40915864 aagaggctgtttccaggacttgaacccgtgaccttatagtcacatgacaacaactttacc 40915805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 72 - 233
Target Start/End: Original strand, 13256397 - 13256556
Alignment:
Q  72 aaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatt-ttggtgcattgtacgcaactttactatgttcttt 170  Q
    ||||||||||  ||||||||||||| |||| ||| | || ||||| ||||| ||||||||| ||| |||||| |||||||||| | ||||  |||| |||    
T  13256397 aaaaagggcaacccggtgcactaaagctcccgcagatgcggggttcgggaaggggtcccactattattggtgtattgtacgcagccttaccctgtttttt 13256496  T
Q  171 agacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc 233  Q
    | ||||||||||    | || ||||||||||||| |||| || |||| ||||||||||||||||    
T  13256497 acacaagaggct----ccaggacttgaacctatgaccttccagtcacatgacaacaactttacc 13256556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 88 - 233
Target Start/End: Complemental strand, 37494972 - 37494827
Alignment:
Q  88 tgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgtttc 187  Q
    ||||||||| ||||||||||||||||||   | || ||||||||||| ||||||  |||||| ||||| ||||  |||| |||| |||||||| ||||||    
T  37494972 tgcactaaagctcctgcatacgcagggtcccgaaaggggtcccacca-tttggtatattgtatgcaaccttaccctgttttttacacaagaggttgtttc 37494874  T
Q  188 tagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc 233  Q
     || |||||||||| || ||||||| || | || |||||||||||||    
T  37494873 caggacttgaacctgtgacctttcagtcgcatggcaacaactttacc 37494827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 127 - 243
Target Start/End: Original strand, 487187 - 487304
Alignment:
Q  127 tcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaaca 225  Q
    |||||||||||| ||| |||||||||| ||||||  |||| | || |||||||| |||||| |  |||||||||  || ||||||| |||| ||||||||    
T  487187 tcccaccattttagtgtattgtacgcagctttaccttgttttatacacaagaggttgtttccaagacttgaacccgtgacctttcagtcacatgacaaca 487286  T
Q  226 actttaccgttgcgccaa 243  Q
    ||||||||||| ||||||    
T  487287 actttaccgttacgccaa 487304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 136
Target Start/End: Original strand, 50555653 - 50555718
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatt 136  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||  ||||| |||| ||||||||    
T  50555653 aaaaaagggcagcccggtgcactaaaactcctgcatacgcagggtccgggaaggggttccaccatt 50555718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 69 - 244
Target Start/End: Complemental strand, 54730392 - 54730213
Alignment:
Q  69 ttaaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatt-ttggtgcattgtacgcaacttta--ctatgt 165  Q
    ||||||||||| |   |||||||||||| |||| |||||||||||||  ||||| |||| ||| |||| |||||| ||| |||||| | |||  |||| |    
T  54730392 ttaaaaaagggtaattcggtgcactaaagctcccgcatacgcagggtccgggaaggggttccatcattattggtgtattatacgcagccttatcctat-t 54730294  T
Q  166 tctttagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccg-ttgcgccaaa 244  Q
    | |||| |||||||||||||||||| |||||||||  || |||||   |||| ||||||||||||||||| ||||||||||    
T  54730293 tttttacacaagaggctgtttctaggacttgaacccgtgaccttttggtcacatgacaacaactttaccgattgcgccaaa 54730213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 23580296 - 23580372
Alignment:
Q  163 tgttctttagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgttgc 238  Q
    |||| |||| |||||||||| |||||||||||||||||  || ||||||| ||||||||||||||||||| ||||||    
T  23580296 tgttttttacacaagaggctctttctagaacttgaacccgtgacctttcagtcacgtgacaacaactttagcgttgc 23580372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 173 - 239
Target Start/End: Original strand, 12257691 - 12257758
Alignment:
Q  173 acaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgttgcg 239  Q
    |||||| ||||||||||| | |||||||  || |||||||||||||||||||||||||||||||||||    
T  12257691 acaagacgctgtttctaggatttgaacccgtgacctttcaatcacgtgacaacaactttaccgttgcg 12257758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 30352577 - 30352668
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccacca-ttttggtgcattgtacgcaactttact 161  Q
    |||||||||||   |||||||||||| |||| |||||||||||||  | ||| ||||||||||| |||||||| |||||||||| |||||||    
T  30352577 aaaaaagggcaacacggtgcactaaagctcccgcatacgcagggtccgagaaggggtcccaccatttttggtgtattgtacgcagctttact 30352668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 243
Target Start/End: Original strand, 30581481 - 30581636
Alignment:
Q  90 cactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatg-ttctttagacaagaggctgtttct 188  Q
    ||||||| ||||| |||| |||||||  ||||| ||||||||||||||||||| ||||||| || | ||||  || || |||| |||||||| ||||||     
T  30581481 cactaaagctcctacatatgcagggtccgggaaggggtcccaccattttggtgtattgtacacacccttaccctgtttttttacacaagaggttgtttcc 30581580  T
Q  189 agaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
    |  |||||||||  || ||||| | | | ||||||||||||||| |||||||||||    
T  30581581 acgacttgaacccttgaccttttagtgatgtgacaacaactttagcgttgcgccaa 30581636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 75 - 187
Target Start/End: Original strand, 7909281 - 7909392
Alignment:
Q  75 aagggcagaccggtgcactaaatctcct-gcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttaga 173  Q
    |||||||  ||| ||||||||| ||||  |||||||||||||| ||||| ||||||||||| ||||||| |||||||||||| ||||  |||| |||| |    
T  7909281 aagggcaacccgatgcactaaagctccccgcatacgcagggttcgggaaggggtcccacca-tttggtgtattgtacgcaaccttaccctgtt-tttaca 7909378  T
Q  174 caagaggctgtttc 187  Q
    |||||| |||||||    
T  7909379 caagagactgtttc 7909392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 72 - 200
Target Start/End: Original strand, 9832311 - 9832436
Alignment:
Q  72 aaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttta 171  Q
    ||||||||||  ||||||||||| |  ||||||||| |||||||  ||||| ||||||||||| ||||||| |||||||||| | ||||  |||  ||||    
T  9832311 aaaaagggcaacccggtgcactagagttcctgcatatgcagggtccgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgt--ttta 9832407  T
Q  172 gacaagaggctgtttctagaacttgaacc 200  Q
     ||||||||||||||  || |||||||||    
T  9832408 cacaagaggctgttttcaggacttgaacc 9832436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 168 - 243
Target Start/End: Complemental strand, 14590879 - 14590802
Alignment:
Q  168 tttagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    ||||||||||||||||||||||| ||||||| |  || ||||||| |||| |||||||||||||||| ||||||||||    
T  14590879 tttagacaagaggctgtttctaggacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaa 14590802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 92 - 236
Target Start/End: Original strand, 39029078 - 39029223
Alignment:
Q  92 ctaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgtttctaga 191  Q
    ||||| |||| ||||| |||||||  || ||  |||||||||||||| ||| ||||||| || | ||||  |||| |||| ||||||||||||||| |      
T  39029078 ctaaagctcccgcatatgcagggtccggaaagtggtcccaccattttcgtgtattgtacacagccttaccctgttttttacacaagaggctgtttccaag 39029177  T
Q  192 acttgaacctatg-cctttcaatcacgtgacaacaactttaccgtt 236  Q
     |||||||||||| ||||| | ||||  ||||||||||||||||||    
T  39029178 gcttgaacctatgaccttttagtcacacgacaacaactttaccgtt 39029223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 98 - 187
Target Start/End: Complemental strand, 49796908 - 49796821
Alignment:
Q  98 ctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgtttc 187  Q
    |||| |||||||||||||| ||||| ||||||||||| ||||||| |||||||||| | |||| ||||| || | |||||||||||||||    
T  49796908 ctcccgcatacgcagggttcgggaaggggtcccacca-tttggtgtattgtacgcagccttaccatgtt-ttaacacaagaggctgtttc 49796821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 50856344 - 50856405
Alignment:
Q  183 gtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
    |||||||| |||||||||  || ||||||||||| |||||||||||||||||||||||||||    
T  50856344 gtttctaggacttgaacccgtgacctttcaatcatgtgacaacaactttaccgttgcgccaa 50856405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 90 - 233
Target Start/End: Complemental strand, 14983953 - 14983810
Alignment:
Q  90 cactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgtttcta 189  Q
    ||||||| |||| |||||||||||||  ||||| ||||||||||| ||| ||| |||||| ||||| ||||  | || |||| ||||||||||||||| |    
T  14983953 cactaaagctcccgcatacgcagggtccgggaaggggtcccacca-tttagtgtattgtaggcaaccttaccctattttttacacaagaggctgtttcaa 14983855  T
Q  190 gaacttgaacctatg-cctttcaatcacgtgacaacaactttacc 233  Q
      ||||||| |  || |||| ||||||  ||||||||||||||||    
T  14983854 agacttgaatccgtgaccttccaatcatatgacaacaactttacc 14983810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 149
Target Start/End: Original strand, 33836484 - 33836563
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatt-ttggtgcattgta 149  Q
    |||||||||||  ||| ||||||||| |||| |||||||||||||  ||||| ||||||||||||| |||||| ||||||    
T  33836484 aaaaaagggcaacccgttgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgta 33836563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 74 - 136
Target Start/End: Complemental strand, 25388311 - 25388249
Alignment:
Q  74 aaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatt 136  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||  ||||| |||||||||||||    
T  25388311 aaagggcaacccggtgcactaaagctcatgcatacgcagggtccgggaaggggtcccaccatt 25388249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 74 - 136
Target Start/End: Original strand, 38755908 - 38755970
Alignment:
Q  74 aaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatt 136  Q
    ||||||||  ||||||||||||| |||| |||||||||||||  ||||| |||||||||||||    
T  38755908 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 38755970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 16494344 - 16494267
Alignment:
Q  84 ccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccacca-ttttggtgcattgtacgcaactttac 160  Q
    ||||| ||||||| || | |||||| |||||| |||||||||||||||||| |||||||| |||||| ||| ||||||    
T  16494344 ccggtacactaaagcttccgcatacacagggtctgggaaagggtcccaccatttttggtgtattgtatgcagctttac 16494267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 74 - 153
Target Start/End: Complemental strand, 20225211 - 20225131
Alignment:
Q  74 aaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatt-ttggtgcattgtacgca 153  Q
    ||||||||  ||||||||||||| |||| ||||| || ||||  ||||| ||||||||||||| |||||| ||||||||||    
T  20225211 aaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgca 20225131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 74 - 134
Target Start/End: Original strand, 30690176 - 30690236
Alignment:
Q  74 aaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccacca 134  Q
    ||||||||| | ||||||||||| |||| |||||||||||||  ||||| |||||||||||    
T  30690176 aaagggcagcctggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca 30690236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 32484371 - 32484307
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccat 135  Q
    |||||||||||  ||||||||||||| |||| ||||| |||||||  ||||| ||||||||||||    
T  32484371 aaaaaagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccat 32484307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 228
Target Start/End: Original strand, 39077788 - 39077948
Alignment:
Q  66 cacttaaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgt 165  Q
    |||| |||||| ||||  ||||||||||| | |||| ||||| |||||||  || ||   ||| |||||||| |||  |||||||||||| ||||  |||    
T  39077788 cactaaaaaaaaggcaacccggtgcactagagctcccgcatatgcagggtccggaaagatgtctcaccattt-ggtatattgtacgcaaccttaccctgt 39077886  T
Q  166 tctttagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaact 228  Q
    |  ||| ||||||||||||||| || |||||||||  || |||||||||||| |||||||||||    
T  39077887 t--ttacacaagaggctgtttccaggacttgaacccgtgacctttcaatcacatgacaacaact 39077948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 168 - 243
Target Start/End: Complemental strand, 41549424 - 41549348
Alignment:
Q  168 tttagacaagaggctgtttctagaacttgaacctatgcc-tttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
    |||| |||||||| |||||| ||||||||||||  || | ||||||||| ||| ||||||||||||| |||||||||    
T  41549424 tttacacaagaggttgtttccagaacttgaacccgtgacatttcaatcatgtgtcaacaactttacctttgcgccaa 41549348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 168 - 243
Target Start/End: Original strand, 54640432 - 54640508
Alignment:
Q  168 tttagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
    |||| ||||||||||||||| |  |||||||||  || |||||||  ||||||||||||| ||||||||||||||||    
T  54640432 tttacacaagaggctgtttccaagacttgaacccgtgacctttcagccacgtgacaacaattttaccgttgcgccaa 54640508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 137
Target Start/End: Complemental strand, 11394987 - 11394924
Alignment:
Q  74 aaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattt 137  Q
    ||||||||  ||||||||||||| |||| |||||||||||||  || || ||||||||||||||    
T  11394987 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccggaaaggggtcccaccattt 11394924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 137
Target Start/End: Complemental strand, 11404714 - 11404651
Alignment:
Q  74 aaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattt 137  Q
    ||||||||  ||||||||||||| |||| |||||||||||||  || || ||||||||||||||    
T  11404714 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccggaaaggggtcccaccattt 11404651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 72 - 187
Target Start/End: Complemental strand, 25629186 - 25629072
Alignment:
Q  72 aaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttta 171  Q
    ||||||||||  ||||||||||||| |||| ||||| | |||||  ||||| ||||||||||| ||||||| ||||||| || | ||||  | || ||||    
T  25629186 aaaaagggcaacccggtgcactaaagctcccgcatatgtagggtccgggaaggggtcccacca-tttggtgtattgtacacagccttaccctatttttta 25629088  T
Q  172 gacaagaggctgtttc 187  Q
     ||||||| |||||||    
T  25629087 cacaagagactgtttc 25629072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 63
Target Start/End: Original strand, 23135373 - 23135403
Alignment:
Q  33 aaataagggaaatgttaacaagtgcccttag 63  Q
    |||||||||||||||||||||||||||||||    
T  23135373 aaataagggaaatgttaacaagtgcccttag 23135403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 137
Target Start/End: Complemental strand, 28494289 - 28494223
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattt 137  Q
    |||||| ||||| ||||||||||| | |||| ||||| ||||| | |||||| ||||||||||||||    
T  28494289 aaaaaaaggcagcccggtgcactagagctcccgcatatgcaggatctgggaaggggtcccaccattt 28494223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 153
Target Start/End: Original strand, 36816381 - 36816463
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgca 153  Q
    |||||||||||  ||||| ||||||| |||| |||||| ||||||   |||| | |||||||| |||||||| ||||||||||    
T  36816381 aaaaaagggcaacccggtacactaaagctcccgcatacacagggtccaggaaggagtcccacctttttggtgtattgtacgca 36816463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 137
Target Start/End: Complemental strand, 38786747 - 38786681
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattt 137  Q
    |||||||||||  ||||||||||| | |||| ||||| |||||||  ||||| ||||||||||||||    
T  38786747 aaaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt 38786681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 243
Target Start/End: Complemental strand, 51420577 - 51420539
Alignment:
Q  205 cctttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
    ||||||| ||||||||||||||||| |||||||||||||    
T  51420577 cctttcagtcacgtgacaacaacttcaccgttgcgccaa 51420539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 153
Target Start/End: Complemental strand, 2813263 - 2813182
Alignment:
Q  74 aaagggcagaccggtgcact-aaatctcctgcatacgcagggtttgggaaagggtcccaccatt-ttggtgcattgtacgca 153  Q
    ||||||||  |||||||||| ||| |||| |||||||||  ||| ||||||||||||||||||| ||| || ||||||||||    
T  2813263 aaagggcaatccggtgcacttaaagctcccgcatacgcatcgttcgggaaagggtcccaccattattgatgtattgtacgca 2813182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 226
Target Start/End: Original strand, 7385500 - 7385628
Alignment:
Q  98 ctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgtttctagaacttga 197  Q
    |||| |||||| ||||||  ||||||||||||||||| ||||||| |||| || |||| ||||  | || |||| ||| ||||||||||| ||  |||||    
T  7385500 ctcccgcatacacagggtccgggaaagggtcccacca-tttggtgtattgcacacaaccttaccctattttttacacatgaggctgtttccagggcttga 7385598  T
Q  198 acctatg-cctttcaatcacgtgacaacaa 226  Q
    |||  || ||||||| |||| |||||||||    
T  7385599 acccgtgacctttcagtcacatgacaacaa 7385628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 153
Target Start/End: Original strand, 29207908 - 29207976
Alignment:
Q  84 ccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgca 153  Q
    ||||||||||| | |||| ||||| |||||||  ||||| ||||||||||| ||||||| ||||||||||    
T  29207908 ccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca-tttggtgtattgtacgca 29207976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 40553937 - 40553998
Alignment:
Q  74 aaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccat 135  Q
    ||||||||  ||||||||||||| |||| |||||||||||||  ||||| ||||| ||||||    
T  40553937 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcacaccat 40553998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 44718702 - 44718641
Alignment:
Q  74 aaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccat 135  Q
    ||||||||  ||||||  ||||| |||| ||||||||||||| |||||| ||||||||||||    
T  44718702 aaagggcaacccggtgtgctaaagctcccgcatacgcagggtctgggaaggggtcccaccat 44718641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 47482849 - 47482914
Alignment:
Q  73 aaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatttt 138  Q
    ||||||||||  || ||||| ||| |||| |||||||||||||  ||||| |||||||||||||||    
T  47482849 aaaagggcagctcgttgcaccaaagctcccgcatacgcagggtccgggaaggggtcccaccatttt 47482914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 136
Target Start/End: Complemental strand, 8820629 - 8820581
Alignment:
Q  88 tgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatt 136  Q
    ||||||||| |||  ||||||||||||| |||||| |||||||||||||    
T  8820629 tgcactaaaactctcgcatacgcagggtctgggaaggggtcccaccatt 8820581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 190
Target Start/End: Complemental strand, 20405210 - 20405106
Alignment:
Q  88 tgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatt-ttggtgcattgtacgcaactttactatg-ttctttagacaagaggctgtt 185  Q
    ||||||||| |||| ||||| || ||||  ||||| ||||||||||||| || ||| |||||||||||  ||||  || || |||| |||||||||||||    
T  20405210 tgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattagtgtattgtacgcaatcttaccctgtttttttacacaagaggctgtt 20405111  T
Q  186 tctag 190  Q
    |||||    
T  20405110 tctag 20405106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 200
Target Start/End: Complemental strand, 25463258 - 25463132
Alignment:
Q  72 aaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttta 171  Q
    |||||||| || | ||||||| ||| |||| ||||| |||||||  ||||| ||||||||||| |||||||  ||||||||||| || |   ||| ||||    
T  25463258 aaaaagggtagcctggtgcac-aaagctcccgcatatgcagggtccgggaaggggtcccacca-tttggtgtgttgtacgcaacctttcccagtttttta 25463161  T
Q  172 gacaagaggctgtttctagaacttgaacc 200  Q
     |||||||| |||||| || |||||||||    
T  25463160 cacaagaggttgtttccaggacttgaacc 25463132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 115
Target Start/End: Complemental strand, 35532130 - 35532086
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggt 115  Q
    |||||||||||  ||||||||||||| |||| |||||||||||||    
T  35532130 aaaaaagggcaacccggtgcactaaagctcccgcatacgcagggt 35532086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 243
Target Start/End: Original strand, 42164241 - 42164317
Alignment:
Q  168 tttagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
    |||| |||||||| |||||| |  |||||||||  || ||||||| |||| ||||||||| ||||||||||||||||    
T  42164241 tttacacaagaggttgtttccaagacttgaacccgtgacctttcagtcacatgacaacaattttaccgttgcgccaa 42164317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 1e-26; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 71 - 233
Target Start/End: Complemental strand, 43557613 - 43557448
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaat-ctcctgcatacgcagggtttgggaaagggtcccaccatt-ttggtgcattgtacgcaactttactatgttct 168  Q
    |||||||||||  |||||||||||||  |||| |||||||||| ||  ||||  ||||||||||||| |||||| |||||||||| | ||||| |||| |    
T  43557613 aaaaaagggcaacccggtgcactaaaagctcccgcatacgcagagtccgggagggggtcccaccattattggtgtattgtacgcagccttactctgtttt 43557514  T
Q  169 ttagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc 233  Q
    ||| ||||||||||||||| || ||||||||| ||| ||||||| |||| ||||||||||||||||    
T  43557513 ttacacaagaggctgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttacc 43557448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 71 - 243
Target Start/End: Original strand, 47077852 - 47078023
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttt 170  Q
    |||||| ||||  ||||||||||| | |||| ||||| | |||||||||||| ||||||||||||||| ||| |||||||||||||||||| | |  |||    
T  47077852 aaaaaaaggcaatccggtgcactagagctcccgcatatgtagggtttgggaaggggtcccaccatttt-gtgtattgtacgcaactttactctat--ttt 47077948  T
Q  171 agacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    | ||||||| ||||||| || |||||||||  || ||||||| |||| |||||||||||||||| ||||||||||    
T  47077949 acacaagagactgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaa 47078023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 74 - 243
Target Start/End: Original strand, 23419674 - 23419843
Alignment:
Q  74 aaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttaga 173  Q
    ||||||||| ||| ||||||||| | || ||| ||||| ||| | |||| |||||||||||||| |||| ||||||||||   ||||  |||| |||| |    
T  23419674 aaagggcagcccgatgcactaaagcccccgcacacgcaaggtctaggaaggggtcccaccattt-ggtgtattgtacgcagtcttaccctgttttttaca 23419772  T
Q  174 caagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
    |||||||||||||| ||||||||||||| || ||||| | |||| ||||| ||||||||||||||||||||    
T  23419773 caagaggctgtttccagaacttgaacctgtgaccttttagtcacatgacagcaactttaccgttgcgccaa 23419843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 11617589 - 11617756
Alignment:
Q  75 aagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagac 174  Q
    |||||||  |||||||||||||  |||||||||||||||||   |||| ||||||||||| ||||||| ||||||||||   ||||  |||| |||| ||    
T  11617589 aagggcaacccggtgcactaaaggtcctgcatacgcagggtccaggaaggggtcccacca-tttggtgtattgtacgcagtcttaccctgttttttacac 11617687  T
Q  175 aagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgcc 241  Q
    |||||| |||||| || |||||||||| || ||||||| |||| |||||||||||||||| ||||||||    
T  11617688 aagaggttgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 11617756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 104 - 243
Target Start/End: Original strand, 28362175 - 28362314
Alignment:
Q  104 catacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgtttctagaacttgaacctat 203  Q
    |||| ||| ||| |||||| |||||||||||||| |||| |||||||||| | |||| | ||| |||| ||||||||| |||||||| |||||||||| |    
T  28362175 catatgcaaggtctgggaaggggtcccaccattt-ggtgtattgtacgcagccttaccaagttttttacacaagaggcagtttctaggacttgaacctgt 28362273  T
Q  204 g-cctttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
    | |||||||  ||| ||||||||||||||||||||||||||    
T  28362274 gacctttcagccacatgacaacaactttaccgttgcgccaa 28362314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 71 - 243
Target Start/End: Complemental strand, 32758397 - 32758226
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttt 170  Q
    |||||||||||  ||||||||||| | |||| ||||| |||||||  ||||| ||||||||||| ||||||| ||||||| || | ||||  |||  |||    
T  32758397 aaaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca-tttggtgtattgtacacagccttaccctgt--ttt 32758301  T
Q  171 agacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    | ||||||||||||||| || |||||||||| || ||||||| |||| |||||||||||||||| ||||||||||    
T  32758300 acacaagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaa 32758226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 72 - 233
Target Start/End: Complemental strand, 42805663 - 42805500
Alignment:
Q  72 aaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatt-ttggtgcattgtacgcaactttactatgttcttt 170  Q
    ||||||||||  ||||||||||||| |||| ||||| || ||||  ||||| ||||||||||||| |||||| ||||||| || | ||||  |||| |||    
T  42805663 aaaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagccttaccctgtttttt 42805564  T
Q  171 agacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc 233  Q
    | ||||||||||||||| || |||||||||  || |||| || |||| ||||||||||||||||    
T  42805563 acacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc 42805500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 84 - 243
Target Start/End: Original strand, 2541029 - 2541190
Alignment:
Q  84 ccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctg 183  Q
    ||||||||||||| |||| ||||||||||||   ||||| ||||||||||| ||||||| || ||||||| | ||||  |||| |||| |||||||||||    
T  2541029 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccacca-tttggtgtatagtacgcagccttaccctgttttttacacaagaggctg 2541127  T
Q  184 tttctagaacttgaacctatg-ccttt-caatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    |||| || |||||||||  || ||||| || |||| |||||||||||||||| ||||||||||    
T  2541128 tttccaggacttgaacccgtgacctttccagtcacatgacaacaactttaccagttgcgccaa 2541190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 75 - 243
Target Start/End: Complemental strand, 16341413 - 16341244
Alignment:
Q  75 aagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagac 174  Q
    |||||||| ||||||||| ||| |||| ||||| |   |||  |||||  || ||||||||||||||| |||||||| | | ||||  |||| |||| ||    
T  16341413 aagggcagcccggtgcaccaaagctcccgcatatgataggtccgggaagagggcccaccattttggtgtattgtacgtagccttaccctgttttttacac 16341314  T
Q  175 aagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
    ||||||||||||||||||||||||||  || ||||||||  || ||| ||||||||||||||||| ||||    
T  16341313 aagaggctgtttctagaacttgaacccgtgacctttcaaatacatgataacaactttaccgttgctccaa 16341244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 73 - 243
Target Start/End: Original strand, 21172008 - 21172177
Alignment:
Q  73 aaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttag 172  Q
    |||||||||  ||||||||||| | |||| ||||| |||||||  ||||| ||||||||||| ||||||| |||||||||| | ||||  |||  ||||     
T  21172008 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgt--tttac 21172104  T
Q  173 acaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    ||||||||||||||| || |||||||||  || ||||||| | || |||||||||||||||| ||||||||||    
T  21172105 acaagaggctgtttccaggacttgaacccgtgacctttcagttacatgacaacaactttaccagttgcgccaa 21172177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 71 - 200
Target Start/End: Original strand, 38262193 - 38262321
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttt 170  Q
    |||||||||||  ||||||||||||| |||| |||||||||| ||| ||||| |||||||| || ||||||| |||||| ||||| |||| || || |||    
T  38262193 aaaaaagggcaatccggtgcactaaagctcccgcatacgcagtgttcgggaaggggtcccatca-tttggtgtattgtatgcaacattaccatatttttt 38262291  T
Q  171 agacaagaggctgtttctagaacttgaacc 200  Q
    | ||||||| ||||||| || |||||||||    
T  38262292 acacaagagactgtttccaggacttgaacc 38262321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 72 - 243
Target Start/End: Complemental strand, 42798806 - 42798634
Alignment:
Q  72 aaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttta 171  Q
    ||||||||||  ||| ||||||| | |||| ||||| |||||||  ||||||||||||||||| ||||||| |||||||||| | ||||  |||| ||||    
T  42798806 aaaaagggcaacccgatgcactatagctcccgcatatgcagggtccgggaaagggtcccacca-tttggtgtattgtacgcagccttaccttgtttttta 42798708  T
Q  172 gacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
     ||||||| ||||||| |  |||||||||  || |||| || |||| |||||||||||||||| ||||||||||    
T  42798707 cacaagagactgtttccaagacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaa 42798634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 94 - 240
Target Start/End: Original strand, 14099026 - 14099172
Alignment:
Q  94 aaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgtttctagaac 193  Q
    |||||||||||||||| |||||| ||||| ||||||||||| ||||||| ||||||||||   |||   |||| |||| |||| ||||| |||| || ||    
T  14099026 aaatctcctgcatacgtagggttcgggaaggggtcccacca-tttggtgtattgtacgcagtcttaacctgttttttacacaaaaggctatttccaggac 14099124  T
Q  194 ttgaacctatg-cctttcaatcacgtgacaacaactttaccgttgcgc 240  Q
    || |||| ||| ||||||| |||| |||||||||||||||||| ||||    
T  14099125 ttcaacccatgacctttcagtcacatgacaacaactttaccgtagcgc 14099172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 94 - 240
Target Start/End: Original strand, 14409043 - 14409189
Alignment:
Q  94 aaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgtttctagaac 193  Q
    |||||||||||||||| |||||| ||||| ||||||||||| ||||||| ||||||||||   |||   |||| |||| |||| ||||| |||| || ||    
T  14409043 aaatctcctgcatacgtagggttcgggaaggggtcccacca-tttggtgtattgtacgcagtcttaacctgttttttacacaaaaggctatttccaggac 14409141  T
Q  194 ttgaacctatg-cctttcaatcacgtgacaacaactttaccgttgcgc 240  Q
    || |||| ||| ||||||| |||| |||||||||||||||||| ||||    
T  14409142 ttcaacccatgacctttcagtcacatgacaacaactttaccgtagcgc 14409189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 75 - 237
Target Start/End: Complemental strand, 29907552 - 29907389
Alignment:
Q  75 aagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagac 174  Q
    |||||||  ||||||||||||| |||| ||||||  |||||  ||||  ||||||||||||||||||| |||| ||||| | ||||  | || |||| ||    
T  29907552 aagggcaacccggtgcactaaagctcccgcatac--agggtccgggatggggtcccaccattttggtgtattgaacgcagccttacactattttttacac 29907455  T
Q  175 aagaggctgtttctagaacttgaacctatg-cctttcaatcacgtg--acaacaactttaccgttg 237  Q
    |||||||||||||||| |||||||||  || ||||||| |||| ||  ||||||||||||||||||    
T  29907454 aagaggctgtttctaggacttgaacccgtgacctttcagtcacatgatacaacaactttaccgttg 29907389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 71 - 233
Target Start/End: Original strand, 34626205 - 34626366
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttt 170  Q
    |||||||||||  ||| || |||||| |||| |||||||||||||  ||||| || |||||||| ||||||| |||| ||||| | ||||  |||| |||    
T  34626205 aaaaaagggcaacccgatgaactaaagctcccgcatacgcagggtccgggaagggatcccacca-tttggtgtattgaacgcagccttaccctgtt-ttt 34626302  T
Q  171 agacaagaggctgtttctagaacttgaacctat-gcctttcaatcacgtgacaacaactttacc 233  Q
    | ||| ||||||||||| || ||||||| || | ||||||||||||| ||||||||||||||||    
T  34626303 acacaggaggctgtttccaggacttgaatctgtggcctttcaatcacatgacaacaactttacc 34626366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 201
Target Start/End: Complemental strand, 21566574 - 21566444
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttt 170  Q
    |||||| || || ||||||||||||| |||| ||||| |||||||| ||||| |||||| |||||||||||| ||||||||||   || || |||| |||    
T  21566574 aaaaaaaggtagcccggtgcactaaagctcccgcatatgcagggttcgggaaggggtcctaccattttggtgtattgtacgcagtcttcctctgtttttt 21566475  T
Q  171 agacaagaggctgtttctagaacttgaacct 201  Q
    | ||||||||| ||||| |  ||||||||||    
T  21566474 acacaagaggcggtttccaagacttgaacct 21566444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 71 - 200
Target Start/End: Complemental strand, 7879776 - 7879648
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttt 170  Q
    |||||||||||  |||||||||| || |||| |||||||||||||  ||||| ||||||||||| ||||||| |||||||||| | ||||  |||| |||    
T  7879776 aaaaaagggcaacccggtgcactgaagctcccgcatacgcagggtccgggaaggggtcccacca-tttggtgtattgtacgcagccttaccttgtttttt 7879678  T
Q  171 agacaagaggctgtttctagaacttgaacc 200  Q
    | |||||||  |||||| || |||||||||    
T  7879677 acacaagagattgtttccaggacttgaacc 7879648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 71 - 243
Target Start/End: Complemental strand, 19265951 - 19265781
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttt 170  Q
    |||||||||||| ||||||||||||| ||||  |||| | ||| |  ||||| |||||||||||||| |||| |||||||||| | ||||  | || |||    
T  19265951 aaaaaagggcagcccggtgcactaaagctcccacatatgtagg-tccgggaaggggtcccaccattt-ggtgtattgtacgcagccttaccctctt-ttt 19265855  T
Q  171 agacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
    | ||||| |||||| || |  |||||||||  || ||||||| |||||||||||||||||||||||||||||||    
T  19265854 acacaagcggctgtatccaagacttgaacccgtgacctttcagtcacgtgacaacaactttaccgttgcgccaa 19265781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 72 - 243
Target Start/End: Complemental strand, 27629771 - 27629599
Alignment:
Q  72 aaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttta 171  Q
    ||||||||||  |||||||||| || || | ||||| ||||||   ||||| |||||||||||||| |||| ||| |||||||| ||||  |||| ||||    
T  27629771 aaaaagggcaacccggtgcactgaagctaccgcatatgcagggcccgggaaggggtcccaccattt-ggtgtattttacgcaaccttaccctgtttttta 27629673  T
Q  172 gacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
     ||||||||||||||| || |||||||||  || ||||||  |||  |||||||||||||||| ||||||||||    
T  27629672 cacaagaggctgtttccaggacttgaacccgtgacctttcggtcaaatgacaacaactttaccagttgcgccaa 27629599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 118 - 243
Target Start/End: Complemental strand, 46354287 - 46354159
Alignment:
Q  118 gggaaagggtcccaccatt-ttggtgcattgtacgcaactttactatgttctttagacaagaggctgtttctagaacttgaacctatg-cctttcaatca 215  Q
    ||||| ||||||||||||| |||||| |||||||||| | ||||  |||| |||| |||||||| |||||| || |||||||||  || |||| ||||||    
T  46354287 gggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgtgaccttccaatca 46354188  T
Q  216 cgtgacaacaactttacc-gttgcgccaa 243  Q
    | |||||||||||||||| ||||||||||    
T  46354187 catgacaacaactttaccagttgcgccaa 46354159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 124 - 243
Target Start/End: Original strand, 48123534 - 48123653
Alignment:
Q  124 gggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgaca 222  Q
    |||||||||||||| |||| |||||| |||  |||||  |||| |||| ||||||||||||||| || ||||||||| ||| |||||||  ||| ||| |    
T  48123534 gggtcccaccattt-ggtgtattgtatgcagttttaccctgttatttacacaagaggctgtttccaggacttgaacccatgacctttcagacacatgata 48123632  T
Q  223 acaactttaccgttgcgccaa 243  Q
    |||||||||||||||||||||    
T  48123633 acaactttaccgttgcgccaa 48123653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 89 - 243
Target Start/End: Original strand, 3469190 - 3469348
Alignment:
Q  89 gcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatttt-ggtgcattgtacgcaactttactatgttcttt--agacaagaggctgtt 185  Q
    |||||||| |||| |||||| |||||| | |||| ||||||| ||||||| |||| ||||||||||||  |||  |||| |||  | |||||||  ||||    
T  3469190 gcactaaagctcccgcatacacagggtctaggaaggggtcccgccatttttggtgtattgtacgcaaccgtaccctgttttttttacacaagagaatgtt 3469289  T
Q  186 tctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
    ||||| ||||||  || || ||||||| |||| ||||||||||||||||||||||||||    
T  3469290 tctaggacttgagtctgtgacctttcagtcacatgacaacaactttaccgttgcgccaa 3469348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 74 - 200
Target Start/End: Complemental strand, 47716596 - 47716469
Alignment:
Q  74 aaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatt-ttggtgcattgtacgcaactttactatgttctttag 172  Q
    ||||||||  ||||||||| ||| |||| ||||| || ||||  ||||| ||||||||||||| |||||| |||||||||| | ||||  |||| ||||     
T  47716596 aaagggcaacccggtgcaccaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttac 47716497  T
Q  173 acaagaggctgtttctagaacttgaacc 200  Q
    ||||||||||||||| || |||||||||    
T  47716496 acaagaggctgtttccaggacttgaacc 47716469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 105 - 254
Target Start/End: Original strand, 42101915 - 42102065
Alignment:
Q  105 atacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgtttctagaacttgaacctatg 204  Q
    |||||||||||  ||||||||||||||||| ||| | | | ||||||||   ||||  |||| ||||   ||||||||||||| || |||||||| | ||    
T  42101915 atacgcagggtccgggaaagggtcccaccactttagagtactgtacgcagtgttaccctgttttttacggaagaggctgtttccaggacttgaacttttg 42102014  T
Q  205 -cctttcaatcacgtgacaacaactttaccgttgcgccaaaacctcccctt 254  Q
     |||| || ||||||||||||||||||||||||| |||||  |||||||||    
T  42102015 accttccagtcacgtgacaacaactttaccgttgtgccaaggcctcccctt 42102065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 71 - 227
Target Start/End: Original strand, 42391097 - 42391251
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttt 170  Q
    |||||||||||  ||||||||||| | |||| ||||| |||||||  ||||| ||||||||||| ||||||| |||||||||| | ||||  |||  |||    
T  42391097 aaaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgt--ttt 42391193  T
Q  171 agacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaac 227  Q
    | |||||| |||||||| || |||||||||  || ||||||| |||| ||||||||||    
T  42391194 acacaagaagctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaac 42391251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 119 - 243
Target Start/End: Complemental strand, 7645047 - 7644922
Alignment:
Q  119 ggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacg 217  Q
    |||| ||||||||| ||||||||| ||||||||| |  ||||  |||| |||| ||||||||||||||| || |||||||||  || ||||||| |||||    
T  7645047 ggaaggggtcccacaattttggtgtattgtacgctatcttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacg 7644948  T
Q  218 tgacaacaactttaccgttgcgccaa 243  Q
    | ||||||| ||||||  ||||||||    
T  7644947 ttacaacaaatttaccactgcgccaa 7644922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 243
Target Start/End: Original strand, 32233132 - 32233303
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttt 170  Q
    |||||||||||| |||||||||| || ||||  |||| |||||||||||||| |  |||||||| ||||||| | | |||||  | ||||  |||| |||    
T  32233132 aaaaaagggcagcccggtgcactgaagctccctcatatgcagggtttgggaaggaatcccacca-tttggtgtaatatacgctgccttaccctgtt-ttt 32233229  T
Q  171 agacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
    | |||||||| |||||| || ||||||||| ||| ||||||| ||| |||||||||| ||| | ||||||||||    
T  32233230 acacaagaggttgtttccaggacttgaacccatgacctttcagtcaggtgacaacaatttttctgttgcgccaa 32233303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 74 - 243
Target Start/End: Original strand, 48735122 - 48735291
Alignment:
Q  74 aaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttaga 173  Q
    ||||||||  ||||||||||| | |||| ||||| |||||||  ||||| ||||||||||| ||||||| |||||||||| | ||||  |||  |||| |    
T  48735122 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca-tttggtgtattgtacgcagccttaccgtgt--tttaca 48735218  T
Q  174 caagaggctgttt-ctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    ||||||| ||||| | || |||||||||  || ||||||| |||| |||||||||||||||| ||||||||||    
T  48735219 caagaggttgtttccaaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaa 48735291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 74 - 232
Target Start/End: Original strand, 10693073 - 10693229
Alignment:
Q  74 aaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttaga 173  Q
    ||||||||  || |||||||| | |||| ||||| |||||||  ||||| |||||||||||||| |||| |||||||||| | ||||  | ||  ||| |    
T  10693073 aaagggcaacccagtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt-ggtgtattgtacgcagccttaccctctt--ttaca 10693169  T
Q  174 caagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttac 232  Q
    |||||||||||||| || |||||||||  || ||||||| |||| |||||||||||||||    
T  10693170 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttac 10693229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 84 - 233
Target Start/End: Original strand, 22698977 - 22699129
Alignment:
Q  84 ccggtgcactaaatctcctgcatacgcagggtttgggaaa-gggtcccaccatttt-ggtgcattgtacgcaactttactatgttctttagacaagaggc 181  Q
    ||||||||||| | |||| |||||| ||||||  |||||| ||||||||||||||| |||| ||||||||||   ||||  |||| |||| ||||||| |    
T  22698977 ccggtgcactatagctcccgcatacacagggtccgggaaaagggtcccaccatttttggtgtattgtacgcagtcttaccctgttttttacacaagagac 22699076  T
Q  182 tgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc 233  Q
    | |||| || ||||||||| ||  ||||||| |||| ||||||||||||||||    
T  22699077 tatttccaggacttgaacccataacctttcagtcacatgacaacaactttacc 22699129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 86 - 233
Target Start/End: Original strand, 33871922 - 33872068
Alignment:
Q  86 ggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgtt 185  Q
    ||||||||||| |||  |||||| |||||| |||||| ||||||||||| ||||||| |||||||||| | |||   |||| |||| |||||||| ||||    
T  33871922 ggtgcactaaagctctcgcatacacagggtctgggaaggggtcccacca-tttggtgtattgtacgcagccttatcctgtt-tttacacaagaggttgtt 33872019  T
Q  186 tctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc 233  Q
    || || |||||||||   | ||||||| |||| ||||||||||||||||    
T  33872020 tccaggacttgaacccgcgacctttcagtcacatgacaacaactttacc 33872068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 71 - 243
Target Start/End: Original strand, 19426887 - 19427059
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttt 170  Q
    |||||||||||  |||||||||| || |||  ||||| |||||||  | ||| |||||||||||||| |||| ||||||||||   ||||  | || |||    
T  19426887 aaaaaagggcaacccggtgcactgaagctctcgcatatgcagggtccgagaa-gggtcccaccattt-ggtgtattgtacgcagtcttaccctatttttt 19426984  T
Q  171 agacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    | ||||||||||||||| || |||||||||  || ||||||  |||| |||||||||||||||| ||||||||||    
T  19426985 acacaagaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttaccagttgcgccaa 19427059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 84 - 136
Target Start/End: Original strand, 35334826 - 35334878
Alignment:
Q  84 ccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatt 136  Q
    ||||||||||||| ||||||||||||||||||  ||||| |||||||||||||    
T  35334826 ccggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccatt 35334878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 73 - 185
Target Start/End: Original strand, 35787268 - 35787378
Alignment:
Q  73 aaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttag 172  Q
    |||||||||  |||||||| | || |||| ||||||||| |||  ||||| ||||||| |||||| |||| |||||||||||| |||| ||||| ||||     
T  35787268 aaaagggcaacccggtgcattgaagctcccgcatacgcaaggtccgggaaggggtcccgccattt-ggtgtattgtacgcaaccttaccatgtt-tttac 35787365  T
Q  173 acaagaggctgtt 185  Q
    |||||||||||||    
T  35787366 acaagaggctgtt 35787378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 243
Target Start/End: Complemental strand, 40464000 - 40463842
Alignment:
Q  85 cggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgt 184  Q
    ||||||||| || |||| |||||||||||||  | ||| ||||||||||| ||||||| ||| |||||| | ||||   ||| |||| ||||||| ||||    
T  40464000 cggtgcactgaagctcccgcatacgcagggtccgagaaggggtcccacca-tttggtgtattatacgcagccttacccagtt-tttacacaagagactgt 40463903  T
Q  185 ttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    |||||  |||||||||  || |||| || |||| |||||||||||||||| ||||||||||    
T  40463902 ttctatgacttgaacccgtgaccttacagtcacatgacaacaactttaccggttgcgccaa 40463842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 75 - 134
Target Start/End: Complemental strand, 18747621 - 18747562
Alignment:
Q  75 aagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccacca 134  Q
    |||||||| ||||||||||||| |||| ||||||||||||||  |||| |||||||||||    
T  18747621 aagggcagcccggtgcactaaagctcccgcatacgcagggttcaggaaggggtcccacca 18747562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 76 - 238
Target Start/End: Complemental strand, 22065720 - 22065559
Alignment:
Q  76 agggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagaca 175  Q
    ||||||| ||||| ||||||| ||||||||||| ||  ||| ||||| ||||| ||| |||| | |  |||||| ||| ||||||  | || |||| |||    
T  22065720 agggcagcccggtacactaaaactcctgcatacacatagttcgggaaggggtctcactattt-gctttattgtatgcagctttaccctatt-tttacaca 22065623  T
Q  176 agaggctgtttctagaacttgaacctatgccttt-caatcacgtgacaacaactttaccgttgc 238  Q
    ||||| |||||| | |||||||||  ||| |||| |||||||||||||||||||||||| ||||    
T  22065622 agaggttgtttccaaaacttgaactcatgacttttcaatcacgtgacaacaactttaccattgc 22065559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 70 - 153
Target Start/End: Original strand, 27889312 - 27889394
Alignment:
Q  70 taaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgca 153  Q
    ||||||||||||  |||||| || ||| |||| |||||||||||||  ||||| ||||||||||| ||||||| ||||||||||    
T  27889312 taaaaaagggcaacccggtgtaccaaagctcccgcatacgcagggtccgggaaggggtcccacca-tttggtgtattgtacgca 27889394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 243
Target Start/End: Complemental strand, 19266561 - 19266416
Alignment:
Q  98 ctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgtttctagaacttga 197  Q
    |||| |||||||||||||  ||||| || |||||| |||| |||| |||||||||| | ||||  |||| ||||  |||| |||| |||  || ||||||    
T  19266561 ctcccgcatacgcagggtccgggaagggatcccacaattt-ggtgtattgtacgcagccttaccctgttttttacgcaagtggctattttcaggacttga 19266463  T
Q  198 acctatg-cctttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
    ||| | | ||||||| |||| ||||||||||||||||||||| ||||    
T  19266462 acccacgacctttcagtcacatgacaacaactttaccgttgcaccaa 19266416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 72 - 149
Target Start/End: Original strand, 13792148 - 13792225
Alignment:
Q  72 aaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgta 149  Q
    |||||||||||  |||||||| ||| |||| |||||||||||||| | ||| ||||||| |||||| |||| ||||||    
T  13792148 aaaaagggcagctcggtgcacaaaagctccagcatacgcagggttcgagaaggggtcccgccatttgggtgtattgta 13792225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 198
Target Start/End: Complemental strand, 1408595 - 1408469
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttt 170  Q
    |||||| ||||  |||||| ||||||  | |||||||||||||||  ||||| ||||||||||| |||| || ||||||| || | ||||  |||| |||    
T  1408595 aaaaaaaggcaatccggtgaactaaagattctgcatacgcagggtccgggaaggggtcccacca-tttgctgtattgtacacagccttaccttgtttttt 1408497  T
Q  171 agacaagaggctgtttctagaacttgaa 198  Q
    | |||||||||| |||| || |||||||    
T  1408496 acacaagaggctatttccaggacttgaa 1408469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 233
Target Start/End: Original strand, 5180169 - 5180316
Alignment:
Q  88 tgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatttt-ggtgcattgtacgcaactttactatgttctttagacaagaggctgttt 186  Q
    |||| |||| |||||||||||| ||| ||||| || |||||| | |||||| ||||  |||||| ||   ||||  |||| || | ||||||||||||||    
T  5180169 tgcattaaagctcctgcatacgtaggatttggaaaggggtccaatcatttttggtgtgttgtacacagtcttaccctgtttttgacacaagaggctgttt 5180268  T
Q  187 ctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc 233  Q
    | |||| |||||||  || ||||||| |||| ||||||||||||||||    
T  5180269 ccagaagttgaacccttgacctttcagtcacatgacaacaactttacc 5180316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 153
Target Start/End: Original strand, 36267814 - 36267896
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaa-gggtcccaccattttggtgcattgtacgca 153  Q
    |||||||||  | ||||||||||||| |||| |||||| ||||||| |||||| |||||| |||| ||||||| ||||||||||    
T  36267814 aaaaaagggaggtccggtgcactaaagctcccgcatacacagggttcgggaaatgggtccaacca-tttggtgtattgtacgca 36267896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 137
Target Start/End: Complemental strand, 45811985 - 45811919
Alignment:
Q  70 taaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattt 137  Q
    |||||||||||| ||| |||||||||| |||||||||| ||||||| ||| || || |||||||||||    
T  45811985 taaaaaagggca-acccgtgcactaaagctcctgcataagcagggtctggaaagggatcccaccattt 45811919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 84 - 243
Target Start/End: Original strand, 14732831 - 14732992
Alignment:
Q  84 ccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatttt-ggtgcattgtacgcaactttactatgttctttagacaagaggct 182  Q
    ||||||||||||| |||| |||||  ||||||| ||||| | ||  ||||||||| |||| |||| ||||| | ||||  |||| |||| |   ||||||    
T  14732831 ccggtgcactaaagctcccgcataaacagggttcgggaaggagtttcaccatttttggtgtattg-acgcagccttaccctgttttttacatgggaggct 14732929  T
Q  183 gtttctagaacttgaacctatgccttt-caatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    ||||| || ||||||||| ||| |||| || |||| |||||||||||||||| ||||||||||    
T  14732930 gtttccaggacttgaacccatgacttttcagtcacatgacaacaactttaccagttgcgccaa 14732992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 121
Target Start/End: Complemental strand, 36602585 - 36602535
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttggga 121  Q
    |||||||||||  ||||||||||||| |||| ||||||||||||| |||||    
T  36602585 aaaaaagggcaacccggtgcactaaagctcccgcatacgcagggtctggga 36602535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 11458267 - 11458332
Alignment:
Q  77 gggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtg 142  Q
    |||||| ||||||||||||| ||| |||||||||||||| ||  ||  || |||||||||||||||    
T  11458267 gggcagcccggtgcactaaagctcttgcatacgcagggtctgcaaagaggccccaccattttggtg 11458332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 137
Target Start/End: Original strand, 23618975 - 23619040
Alignment:
Q  72 aaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattt 137  Q
    ||||||||||  ||| ||||||||| |||||||| ||||| ||| || ||| ||||||||||||||    
T  23618975 aaaaagggcaacccgctgcactaaagctcctgcaaacgcaaggtctgcgaaggggtcccaccattt 23619040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 233
Target Start/End: Complemental strand, 42476994 - 42476849
Alignment:
Q  86 ggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgtt 185  Q
    ||||||||| | |||| ||||| |||| |  | |||| |||||||||||||| |||| |||||||||| | ||||  ||||  ||| ||||||| |||||    
T  42476994 ggtgcactagagctcccgcatatgcagagcctaggaaggggtcccaccattt-ggtgtattgtacgcagccttaccttgtt--ttacacaagagactgtt 42476898  T
Q  186 tctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc 233  Q
    || |||||||||| |  || ||||| | |||| ||||||||||||||||    
T  42476897 tccagaacttgaatccgtgaccttttagtcacatgacaacaactttacc 42476849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 243
Target Start/End: Original strand, 42495928 - 42496005
Alignment:
Q  168 tttagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    |||| ||||||||||||||| || |||||||||  || ||||||| |||  |||||||||||||||| ||||||||||    
T  42495928 tttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcatatgacaacaactttaccagttgcgccaa 42496005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 92 - 239
Target Start/End: Original strand, 5653147 - 5653293
Alignment:
Q  92 ctaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgtttctaga 191  Q
    ||||| || ||||||| ||| |||||| ||||| |||| ||||||| | || |||||| ||||| ||||||| || |  | |||||||| |||||  |||    
T  5653147 ctaaagcttctgcatatgcatggtttgcgaaagagtcctaccattt-gatgtattgta-gcaaccttactatcttttaaacacaagaggttgttttcaga 5653244  T
Q  192 acttgaacctatgcc-tttcaatcacgtgacaacaactttaccgttgcg 239  Q
    |||||||| |||| | ||| ||||||||||||||||  ||| |||||||    
T  5653245 acttgaacttatggcattttaatcacgtgacaacaatattatcgttgcg 5653293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 187
Target Start/End: Complemental strand, 38604652 - 38604550
Alignment:
Q  84 ccggtgcact-aaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggct 182  Q
    |||||||||| ||| |||| |||||||||||||  || || ||||| ||||| ||||||| |||||||||| | ||||  |||| |||| ||||||||||    
T  38604652 ccggtgcacttaaagctcccgcatacgcagggtccggaaaggggtctcacca-tttggtgtattgtacgcagccttaccctgtt-tttacacaagaggct 38604555  T
Q  183 gtttc 187  Q
    |||||    
T  38604554 gtttc 38604550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 8e-25; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 73 - 243
Target Start/End: Original strand, 12221913 - 12222087
Alignment:
Q  73 aaaagggcagaccggtgcactaaat-ctcctgcatacgcagggtttgggaaagggtcccaccatt-ttggtgcattgtacgcaactttactatgttcttt 170  Q
    |||||||||  |||||||||||||  |||| |||||||||||||  ||||| ||||||||||||| |||||| |||||||||| | ||||  |||| |||    
T  12221913 aaaagggcaacccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttt 12222012  T
Q  171 agacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    | ||||||||||||||| |  |||||||||  || ||||||| |||| |||||||||||||||| ||||||||||    
T  12222013 acacaagaggctgtttccaagacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaa 12222087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 71 - 234
Target Start/End: Complemental strand, 9161262 - 9161098
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatt-ttggtgcattgtacgcaactttactatgttctt 169  Q
    |||||||||||  | ||||||||||| || | |||||||||||||  | ||| ||||||||||||| ||| || |||||||||| | ||||| |||| ||    
T  9161262 aaaaaagggcaacctggtgcactaaagcttccgcatacgcagggtccgagaaggggtcccaccattattgatgtattgtacgcagccttactctgtt-tt 9161164  T
Q  170 tagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccg 234  Q
    || ||||||||||||||| || |||||||||| || ||||||| |||| |||||||||||||||||    
T  9161163 tacacaagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccg 9161098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 72 - 226
Target Start/End: Original strand, 29355853 - 29356009
Alignment:
Q  72 aaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatt-ttggtgcattgtacgcaactttactatgttcttt 170  Q
    ||||||||||  ||||||||||||| |||| |||||||||||||  ||||| ||||||||||||| |||||| |||||||||| | ||||  ||||  ||    
T  29355853 aaaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttctt 29355952  T
Q  171 agacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaa 226  Q
    | ||||||||||||||| || |||||||||  || ||||||| |||| |||||||||    
T  29355953 acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaa 29356009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 73 - 243
Target Start/End: Original strand, 1354756 - 1354925
Alignment:
Q  73 aaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttag 172  Q
    |||||||||  ||||||||||| | |||| ||||| |||||||  ||||| ||||||||||| ||||||| |||||||||| | ||||  |||  ||||     
T  1354756 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgt--tttac 1354852  T
Q  173 acaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    ||||||||||||||| || |||||||||  || ||||||| |||| |||||||||||||||| ||||||||||    
T  1354853 acaagaggctgtttccaggacttgaaccagtgacctttcagtcacatgacaacaactttaccagttgcgccaa 1354925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 71 - 243
Target Start/End: Complemental strand, 1347100 - 1346929
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttt 170  Q
    |||||||||||  ||||||||||| | |||| ||||| |||||||  ||||| ||||||||||| ||||||| |||||||||| | ||||  |||  |||    
T  1347100 aaaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgt--ttt 1347004  T
Q  171 agacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    | ||||| ||||||||| || |||||||||  || ||||||| |||| |||||||||||||||| ||||||||||    
T  1347003 acacaagtggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaa 1346929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 84 - 243
Target Start/End: Original strand, 3815087 - 3815247
Alignment:
Q  84 ccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctg 183  Q
    ||||||||||||| || | ||||||| |||||| ||||||||||||||||| ||||||| ||||||||||    ||| || || |||| |||| || |||    
T  3815087 ccggtgcactaaagcttccgcatacgtagggttcgggaaagggtcccacca-tttggtgtattgtacgcagtcgtaccatattttttacacaatagtctg 3815185  T
Q  184 tttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    |||| || |||||||||  || | ||||| |||| |||||||||||||||| ||||||||||    
T  3815186 tttccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaa 3815247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 240
Target Start/End: Complemental strand, 11849159 - 11849024
Alignment:
Q  104 catacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgtttctagaacttgaacctat 203  Q
    ||||||||| ||| ||||| ||||||||||||||||||| |||||  |||||||||   |||| || | |||||||| ||||||  | ||||||||| |     
T  11849159 catacgcagagttcgggaaggggtcccaccattttggtgtattgtgggcaactttatcctgtttttaacacaagaggttgtttcctggacttgaacc-aa 11849061  T
Q  204 gcctttcaatcacgtgacaacaactttaccgttgcgc 240  Q
     | ||||| ||||||||||| ||||||||||||||||    
T  11849060 acatttcagtcacgtgacaataactttaccgttgcgc 11849024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 85 - 200
Target Start/End: Complemental strand, 33138957 - 33138843
Alignment:
Q  85 cggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgt 184  Q
    |||||||||||| || |||||||| ||||||  || |||||||||||||| ||||||| |||||||||  | ||||| |||| |||| |||||||| |||    
T  33138957 cggtgcactaaagctactgcatacacagggtccggaaaagggtcccacca-tttggtgtattgtacgcggccttactctgttttttatacaagaggttgt 33138859  T
Q  185 ttctagaacttgaacc 200  Q
    ||| || |||||||||    
T  33138858 ttccaggacttgaacc 33138843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 74 - 243
Target Start/End: Original strand, 7947371 - 7947541
Alignment:
Q  74 aaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttaga 173  Q
    ||||||||| |  |||||||||| ||||  |||||||| |||  ||||| ||| ||||||||||||||| |||||||||| | ||||  || | |||| |    
T  7947371 aaagggcagccaagtgcactaaagctcccacatacgcaaggtccgggaagggggcccaccattttggtgtattgtacgcagccttaccctggtttttaca 7947470  T
Q  174 caagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
    || |||| |||||| || | |||||||  || ||||||| |||||  ||| ||||||||||||||||||||    
T  7947471 caggaggttgtttccaggagttgaaccggtgacctttcagtcacgcaacaccaactttaccgttgcgccaa 7947541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 70 - 232
Target Start/End: Original strand, 2166406 - 2166570
Alignment:
Q  70 taaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatt-ttggtgcattgtacgcaactttactatgttct 168  Q
    ||||||||||||  ||||||||||||| |||| | |||   |||||  ||||| ||||||||||||| |||||| |||||||||||| |||   |||  |    
T  2166406 taaaaaagggcaacccggtgcactaaagctcccgaatatatagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttatcctgtatt 2166505  T
Q  169 ttagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttac 232  Q
    ||| |||||||| |||||| || |||||||||  || ||||||| |||| | |||||||||||||    
T  2166506 ttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacataacaacaactttac 2166570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 70 - 232
Target Start/End: Original strand, 2178039 - 2178203
Alignment:
Q  70 taaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatt-ttggtgcattgtacgcaactttactatgttct 168  Q
    ||||||||||||  ||||||||||||| |||| | |||   |||||  ||||| ||||||||||||| |||||| |||||||||||| |||   |||  |    
T  2178039 taaaaaagggcaacccggtgcactaaagctcccgaatatatagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttatcctgtatt 2178138  T
Q  169 ttagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttac 232  Q
    ||| |||||||| |||||| || |||||||||  || ||||||| |||| | |||||||||||||    
T  2178139 ttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacataacaacaactttac 2178203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 105 - 243
Target Start/End: Original strand, 13905011 - 13905148
Alignment:
Q  105 atacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgtttctagaacttgaacctatg 204  Q
    |||||||||||| |||||||||||| ||||||| |||| |||||| ||| | ||||  |||| |||| ||||||||  ||||  || |||||| ||  ||    
T  13905011 atacgcagggttcgggaaagggtcc-accattt-ggtgaattgtatgcagccttaccctgttttttacacaagaggtcgttttcaggacttgagcccgtg 13905108  T
Q  205 -cctttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
     ||||||| |||| ||||||||||||||||||||||||||    
T  13905109 acctttcagtcacatgacaacaactttaccgttgcgccaa 13905148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 12886049 - 12885984
Alignment:
Q  73 aaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatttt 138  Q
    |||||||||  ||||||||||||| ||||  |||||||||||| |||||| |||||||||||||||    
T  12886049 aaaagggcaacccggtgcactaaagctcccacatacgcagggtctgggaaggggtcccaccatttt 12885984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 125 - 245
Target Start/End: Complemental strand, 6024319 - 6024196
Alignment:
Q  125 ggtcccaccatt-ttggtgcattgtacgcaactttactatgttctttagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgaca 222  Q
    ||||||| |||| |||||| ||||||||||   |||| ||||| |||| |||||||||||||||||| | ||||| |  || |||| ||||||| |||||    
T  6024319 ggtcccatcattattggtgtattgtacgcagtcttaccatgttttttacacaagaggctgtttctaggatttgaaaccgtgaccttccaatcacatgaca 6024220  T
Q  223 acaactttacc-gttgcgccaaaa 245  Q
    ||||||||||| |||||| |||||    
T  6024219 acaactttaccagttgcgtcaaaa 6024196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 173 - 243
Target Start/End: Complemental strand, 12889463 - 12889392
Alignment:
Q  173 acaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttaccgttgcgccaa 243  Q
    ||||||||||||||  |  |||||||||| || ||||||| ||||||||||||||||||||||||| |||||    
T  12889463 acaagaggctgttttcaagacttgaacctgtgacctttcactcacgtgacaacaactttaccgttgtgccaa 12889392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 72 - 136
Target Start/End: Complemental strand, 6808532 - 6808468
Alignment:
Q  72 aaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatt 136  Q
    ||||||||||  ||||||||||||| |||| |||||| ||||||  ||||| |||||||||||||    
T  6808532 aaaaagggcaacccggtgcactaaagctcccgcatacacagggtccgggaaggggtcccaccatt 6808468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 74 - 142
Target Start/End: Original strand, 10734905 - 10734973
Alignment:
Q  74 aaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtg 142  Q
    ||||||||| |||||| |||||| |||| |||||||||||||  ||||| ||| ||||||| |||||||    
T  10734905 aaagggcagcccggtggactaaagctcccgcatacgcagggtccgggaagggggcccaccactttggtg 10734973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 107 - 233
Target Start/End: Original strand, 15866072 - 15866196
Alignment:
Q  107 acgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgtttctagaacttgaacctatg-c 205  Q
    |||||||||  ||||| |||||||||||||| |||| |||  ||||| ||||||  |||| ||||   ||||||||||||| || | ||||||| ||| |    
T  15866072 acgcagggtccgggaaggggtcccaccattt-ggtgtatt--acgcagctttaccctgttttttacttaagaggctgtttccaggaattgaacccatgac 15866168  T
Q  206 ctttcaatcacgtgacaacaactttacc 233  Q
    ||||||||||| || |||||||||||||    
T  15866169 ctttcaatcacatgccaacaactttacc 15866196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 153
Target Start/End: Complemental strand, 12892147 - 12892064
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatt-ttggtgcattgtacgca 153  Q
    |||||||||||  ||||||||||||| |||| ||||| || ||||  ||||| ||||||||||||| |||||| ||| ||||||    
T  12892147 aaaaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattatacgca 12892064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 199
Target Start/End: Complemental strand, 31990196 - 31990085
Alignment:
Q  88 tgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgtttc 187  Q
    ||||||||| ||| |||||||| ||| ||||| || ||||||| ||||||||||| |||||| ||||  || ||  ||| |||| |||||||  ||||||    
T  31990196 tgcactaaaactcttgcatacgtaggttttggaaaggggtcccgccattttggtgtattgtatgcaagcttgctccgttttttacacaagagattgtttc 31990097  T
Q  188 tagaacttgaac 199  Q
     | |||||||||    
T  31990096 caaaacttgaac 31990085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 85 - 139
Target Start/End: Complemental strand, 17448441 - 17448387
Alignment:
Q  85 cggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttg 139  Q
    ||||| |||||| |||||||| || |||||||||||||| | |||||||||||||    
T  17448441 cggtgaactaaaactcctgcagacacagggtttgggaaaagatcccaccattttg 17448387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 13267862 - 13267797
Alignment:
Q  72 aaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattt 137  Q
    ||||||||||  |||||||||| || |||| |||||||||||||   |||| ||||||||||||||    
T  13267862 aaaaagggcaacccggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 13267797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 74 - 142
Target Start/End: Complemental strand, 11395895 - 11395828
Alignment:
Q  74 aaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtg 142  Q
    ||||||||| |||||| |||||| |||| ||||||||||| |  ||||| ||||||||||| |||||||    
T  11395895 aaagggcag-ccggtggactaaagctcccgcatacgcaggatccgggaaggggtcccaccactttggtg 11395828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 136
Target Start/End: Original strand, 14975100 - 14975152
Alignment:
Q  84 ccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccatt 136  Q
    ||||||||||||| |||| ||||| || ||||| ||||| |||||||||||||    
T  14975100 ccggtgcactaaaactcccgcatatgcggggttcgggaaggggtcccaccatt 14975152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 187
Target Start/End: Complemental strand, 26097295 - 26097183
Alignment:
Q  72 aaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttta 171  Q
    ||||||||||  ||||||||||| | |||| ||||| |||||||  ||||| |||||||  || ||||||| |||||||||| | ||||  |||  ||||    
T  26097295 aaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccttca-tttggtgtattgtacgcagccttaccctgt--ttta 26097199  T
Q  172 gacaagaggctgtttc 187  Q
     |||||||||||||||    
T  26097198 cacaagaggctgtttc 26097183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 72 - 243
Target Start/End: Original strand, 13022 - 13193
Alignment:
Q  72 aaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttta 171  Q
    ||||||||||  ||||||||||||| | || ||||||||||||| |||||| ||||||||||| || |||| |||||||||| | ||||  |||| ||||    
T  13022 aaaaagggcaacccggtgcactaaagcccccgcatacgcagggtctgggaaggggtcccacca-ttcggtgtattgtacgcagccttaccttgtt-ttta 13119  T
Q  172 gacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
      |||||||||||||| || |||||||||  || ||||||| |||| |||||||||||||||| ||||||||||    
T  13120 cgcaagaggctgtttccaggacttgaaccggtgacctttcagtcacatgacaacaactttaccggttgcgccaa 13193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 56; Significance: 5e-23; HSPs: 3)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 71 - 233
Target Start/End: Complemental strand, 46969 - 46807
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttt 170  Q
    |||||||||||  ||||||||||||| |||| |||||||||||||  ||||| ||||||||||| ||||||| |||||||||||| ||||  | || |||    
T  46969 aaaaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca-tttggtgtattgtacgcaaccttaccctatttttt 46871  T
Q  171 agacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc 233  Q
    | |||||||| |||||| || |||||||||  || ||||  | |||| ||||||||||||||||    
T  46870 acacaagaggttgtttccagcacttgaacccgtgaccttctagtcacatgacaacaactttacc 46807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 71 - 243
Target Start/End: Original strand, 24769 - 24937
Alignment:
Q  71 aaaaaagggcagaccgg-tgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctt 169  Q
    ||||||||||| ||||| ||||||||| |||| |||||||||||||| ||||| ||||||||||| |||||||  ||||||||| | ||||  |||| ||    
T  24769 aaaaaagggca-accggctgcactaaagctcccgcatacgcagggttcgggaaggggtcccacca-tttggtgtgttgtacgcagccttaccctgttttt 24866  T
Q  170 tagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    || |||||||||||||      ||||||||| ||| ||||||| |||| |||||||||||||||| ||||||||||    
T  24867 tacacaagaggctgtt-----gacttgaacccatgacctttcagtcacatgacaacaactttaccagttgcgccaa 24937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 70 - 141
Target Start/End: Original strand, 46703 - 46774
Alignment:
Q  70 taaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggt 141  Q
    |||||| |||||| | | |||| |||| |||| ||||||||||||| |||||| ||||||||||||||||||    
T  46703 taaaaatgggcagcctgatgcattaaagctcccgcatacgcagggtctgggaaggggtcccaccattttggt 46774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 72 - 243
Target Start/End: Complemental strand, 30714 - 30544
Alignment:
Q  72 aaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttcttta 171  Q
    ||||||||||  ||||||||||| | |||| ||||| |||||||  ||||| |||||||||||||| |||| |||||||||| |  |||  ||||  |||    
T  30714 aaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt-ggtgtattgtacgcagccctaccctgtt--tta 30618  T
Q  172 gacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
     ||||||||||||||| || |||||||||  || ||||||| |||| |||||||||||||||| ||||||||||    
T  30617 cacaagaggctgtttccaggacttgaaccggtgacctttcagtcacatgacaacaactttaccagttgcgccaa 30544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 74 - 233
Target Start/End: Complemental strand, 59114 - 58953
Alignment:
Q  74 aaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccacca-ttttggtgcattgtacgcaactttactatgttctttag 172  Q
    ||||||||  ||| ||||||||| |||| |||||||||| || |||||| ||||||||||| |||||||| ||||||||||   ||||  |||| ||||     
T  59114 aaagggcaacccgatgcactaaagctcccgcatacgcagagtctgggaaggggtcccaccatttttggtgtattgtacgcagtcttaccctgttttttat 59015  T
Q  173 acaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc 233  Q
    ||||||||||||||| || |||||||||  || ||||||| |||| |||||| || ||||||    
T  59014 acaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaataagtttacc 58953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 44; Significance: 7e-16; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 84 - 233
Target Start/End: Original strand, 10060 - 10207
Alignment:
Q  84 ccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctg 183  Q
    ||||||||||  | |||||||||| |||||||  ||||| ||||||||| |||| |||| ||||||||||   ||||| ||||  ||| |||||||||||    
T  10060 ccggtgcactggagctcctgcatatgcagggtccgggaaggggtcccactattt-ggtgtattgtacgcagtcttactctgtt--ttacacaagaggctg 10156  T
Q  184 tttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc 233  Q
    |||| || |||||||||  || ||||||| |||| ||||||||||||||||    
T  10157 tttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 10207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 84 - 233
Target Start/End: Original strand, 20388 - 20535
Alignment:
Q  84 ccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctg 183  Q
    ||||||||||  | |||||||||| |||||||  ||||| ||||||||| |||| |||| ||||||||||   ||||| ||||  ||| |||||||||||    
T  20388 ccggtgcactggagctcctgcatatgcagggtccgggaaggggtcccactattt-ggtgtattgtacgcagtcttactctgtt--ttacacaagaggctg 20484  T
Q  184 tttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc 233  Q
    |||| || |||||||||  || ||||||| |||| ||||||||||||||||    
T  20485 tttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 20535  T

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Target: scaffold0311 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 87 - 233
Target Start/End: Complemental strand, 10932 - 10786
Alignment:
Q  87 gtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgttt 186  Q
    |||||||||| |||| |||||||||||||  ||||| ||||||||||| ||||||| |||| ||||| |  |||  |||| |||| |||||||| |||||    
T  10932 gtgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca-tttggtgtattggacgcagccctaccctgttttttacacaagaggttgttt 10834  T
Q  187 ctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc 233  Q
      ||| ||||||||  || |||| || |||| ||||||||||||||||    
T  10833 tcagaccttgaacccgtgaccttccagtcacatgacaacaactttacc 10786  T

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Target: scaffold0005 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 168 - 243
Target Start/End: Original strand, 226499 - 226576
Alignment:
Q  168 tttagacaagaggctgtttctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    ||||||||||||||||||||||| ||||||| |  || ||||||| |||| |||||||||||||||| ||||||||||    
T  226499 tttagacaagaggctgtttctaggacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaa 226576  T

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Target: scaffold0015 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 73 - 200
Target Start/End: Original strand, 48633 - 48757
Alignment:
Q  73 aaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttag 172  Q
    |||||||||  ||||||||||| | |||| ||||| |||||||  ||||| ||||||||||| ||||||| |||||||||| | ||||  |||  ||||     
T  48633 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgt--tttac 48729  T
Q  173 acaagaggctgtttctagaacttgaacc 200  Q
    ||||||||||||||| |  |||||||||    
T  48730 acaagaggctgtttccaccacttgaacc 48757  T

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Target: scaffold0180 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 153
Target Start/End: Original strand, 24130 - 24211
Alignment:
Q  71 aaaaaagggcagaccggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgca 153  Q
    |||||||||||  ||||||||||| | |||| ||||| |||||||  ||||| ||||||||||| ||||||| ||||||||||    
T  24130 aaaaaagggcaatccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca-tttggtgtattgtacgca 24211  T

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Target: scaffold0223 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 243
Target Start/End: Complemental strand, 11252 - 11097
Alignment:
Q  86 ggtgcactaaatctcctgcatacgcagggtttgggaaagggtcccaccattttggtgcattgtacgcaactttactatgttctttagacaagaggctgtt 185  Q
    ||||||||| | |||| ||||| |||||||  ||||| | |||||||||||| |||| |||||| ||| | ||||| ||||  ||| |||||||||||||    
T  11252 ggtgcactagagctcccgcatatgcagggtccgggaaggtgtcccaccattt-ggtgtattgtaagcagccttactttgtt--ttacacaagaggctgtt 11156  T
Q  186 tctagaacttgaacctatg-cctttcaatcacgtgacaacaactttacc-gttgcgccaa 243  Q
    || || |||||||||  || ||||||| |||| | | |||||||||||| ||||||||||    
T  11155 tccaggacttgaacccgtgacctttcagtcacat-agaacaactttaccagttgcgccaa 11097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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