View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8208_2D_low_10 (Length: 366)
Name: NF8208_2D_low_10
Description: NF8208_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8208_2D_low_10 |
 | |
|
| [»] scaffold0264 (1 HSPs) |
| | |
|
| [»] scaffold0074 (1 HSPs) |
| | |
|
| [»] scaffold0007 (2 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 233; Significance: 1e-129; HSPs: 13)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 98 - 354
Target Start/End: Original strand, 18990296 - 18990551
Alignment:
| Q |
98 |
tacttgccgacatttgattgtttgaaaataatgcagaactatgggcagattgagtagaactagattcttgtgcaagaacgtttgaatccgttctgccatg |
197 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || ||||| |
|
|
| T |
18990296 |
tacttgccgacatttgattgtttgaaaataatgcagaactatgggcagattgagtagaactagattcttgtgcaagaacgtttgaatccct-ctaccatg |
18990394 |
T |
|
| Q |
198 |
caagaaaaacgcaggttctggtggagttggtaattcaactgcataaatgctaagataagaagcaactgtcacgatcgaaggtctagcatccgggtcattt |
297 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18990395 |
caagaaaaacgcaggttctggtggagttggtaattcaactgcataaatgctaagataagaagcaactgtcacgatcgaaggtctagcatccgggtcattt |
18990494 |
T |
|
| Q |
298 |
tgaacacataatcgaccaatctaaatgcacttaatgacttcatttgtagaataatct |
354 |
Q |
| |
|
|||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
18990495 |
tgaacacataatagaccaatctgaatgcacttaatgacttcatttgtagaataatct |
18990551 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 71 - 354
Target Start/End: Original strand, 20083212 - 20083495
Alignment:
| Q |
71 |
atttaataaactatcgaggaataaaagtacttgccgacatttgattgtttgaaaataatgcagaactatgggcagattgagtagaactagattcttgtgc |
170 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||| ||||||||||| |
|
|
| T |
20083212 |
atttaataaactatcgaggaataaaagtacttgccgacatttgattgtttgagaataatgcagaactattggtagattgagtagaacttgattcttgtgc |
20083311 |
T |
|
| Q |
171 |
aagaacgtttgaatccgttctgccatgcaagaaaaacgcaggttctggtggagttggtaattcaactgcataaatgctaagataagaagcaactgtcacg |
270 |
Q |
| |
|
|||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
20083312 |
aagaacatttgaataagttctaccatgcaagaaaaacgcaggttctggtggagttggtaattcaactgcataactgctaagataagaagcaactgtcacg |
20083411 |
T |
|
| Q |
271 |
atcgaaggtctagcatccgggtcattttgaacacataatcgaccaatctaaatgcacttaatgacttcatttgtagaataatct |
354 |
Q |
| |
|
||||||||||| ||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
20083412 |
atcgaaggtctggcatccgggtcatgttgaacacataatagaccaatctgaatgcacttaatgacttcatttgtagaataatct |
20083495 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 71 - 354
Target Start/End: Complemental strand, 22209967 - 22209684
Alignment:
| Q |
71 |
atttaataaactatcgaggaataaaagtacttgccgacatttgattgtttgaaaataatgcagaactatgggcagattgagtagaactagattcttgtgc |
170 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||| |||| |
|
|
| T |
22209967 |
atttaataaactatcgaggaataaaagtacttgccgacatttgattgtttgaaaattgtgcagaactattggcagattgagtagaacttgattctagtgc |
22209868 |
T |
|
| Q |
171 |
aagaacgtttgaatccgttctgccatgcaagaaaaacgcaggttctggtggagttggtaattcaactgcataaatgctaagataagaagcaactgtcacg |
270 |
Q |
| |
|
|||||||| |||| ||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||| | |
|
|
| T |
22209867 |
aagaacgtccgaataagttctaccatgcaagaaaaacgcaggttcttttggagttggtaattcaattgcataactgctaagataagaagcaactgtcgca |
22209768 |
T |
|
| Q |
271 |
atcgaaggtctagcatccgggtcattttgaacacataatcgaccaatctaaatgcacttaatgacttcatttgtagaataatct |
354 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||| ||||||||||||||||||||| |
|
|
| T |
22209767 |
attgaaggtctagcatccgggtcattttgaacacataatagaccaatctgaatgtacttaattacttcatttgtagaataatct |
22209684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 71 - 354
Target Start/End: Original strand, 20235183 - 20235466
Alignment:
| Q |
71 |
atttaataaactatcgaggaataaaagtacttgccgacatttgattgtttgaaaataatgcagaactatgggcagattgagtagaactagattcttgtgc |
170 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||| |||||| |||| |||||||||||||||||| ||||||||||| |
|
|
| T |
20235183 |
atttaataaactatagaggaataaaagtacttgcggacatttgattgtttgagaatagtgcagagctattggcagattgagtagaacttgattcttgtgc |
20235282 |
T |
|
| Q |
171 |
aagaacgtttgaatccgttctgccatgcaagaaaaacgcaggttctggtggagttggtaattcaactgcataaatgctaagataagaagcaactgtcacg |
270 |
Q |
| |
|
||||| |||||||| | |||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||| ||||||| | |
|
|
| T |
20235283 |
aagaatgtttgaattctttctaccatgcaagaaaaacgcaggttctttcggagttggtaattcaactgcataactgctaaggtaagaagaaactgtcgag |
20235382 |
T |
|
| Q |
271 |
atcgaaggtctagcatccgggtcattttgaacacataatcgaccaatctaaatgcacttaatgacttcatttgtagaataatct |
354 |
Q |
| |
|
|| |||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
20235383 |
attgaaggtctagcatccgggtcatgttgaacacataatagaccaatctgaatgcacttaatgacttcatttgtagaataatct |
20235466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 71 - 354
Target Start/End: Original strand, 22129167 - 22129450
Alignment:
| Q |
71 |
atttaataaactatcgaggaataaaagtacttgccgacatttgattgtttgaaaataatgcagaactatgggcagattgagtagaactagattcttgtgc |
170 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||| |||||| |||| |||||||||||||||||| ||||||||||| |
|
|
| T |
22129167 |
atttaataaactatagaggaataaaagtacttgcggacatttgattgtttgagaatagtgcagagctattggcagattgagtagaacttgattcttgtgc |
22129266 |
T |
|
| Q |
171 |
aagaacgtttgaatccgttctgccatgcaagaaaaacgcaggttctggtggagttggtaattcaactgcataaatgctaagataagaagcaactgtcacg |
270 |
Q |
| |
|
||||| |||||||| | |||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||| ||||||| | |
|
|
| T |
22129267 |
aagaatgtttgaattctttctaccatgcaagaaaaacgcaggttctttcggagttggtaattcaactgcataactgctaaggtaagaagaaactgtcgag |
22129366 |
T |
|
| Q |
271 |
atcgaaggtctagcatccgggtcattttgaacacataatcgaccaatctaaatgcacttaatgacttcatttgtagaataatct |
354 |
Q |
| |
|
|| |||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
22129367 |
attgaaggtctagcatccgggtcatgttgaacacataatagaccaatctgaatgcacttaatgacttcatttgtagaataatct |
22129450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 73 - 354
Target Start/End: Original strand, 18994860 - 18995141
Alignment:
| Q |
73 |
ttaataaactatcgaggaataaaagtacttgccgacatttgattgtttgaaaataatgcagaactatgggcagattgagtagaactagattcttgtgcaa |
172 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||| |||||||||||||||||| |||||| |||||| |
|
|
| T |
18994860 |
ttaataaactatcgaggaataaaagtacttgcagacatttgattgattgagaatagtacagaactattggcagattgagtagaacttgattctagtgcaa |
18994959 |
T |
|
| Q |
173 |
gaacgtttgaatccgttctgccatgcaagaaaaacgcaggttctggtggagttggtaattcaactgcataaatgctaagataagaagcaactgtcacgat |
272 |
Q |
| |
|
|||||| |||| ||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||| || |
|
|
| T |
18994960 |
gaacgtcggaataagttctaccatgcaagaaaaacgcaggttcttttggagttggtaattcaattgcataactgctaagataagaagcaactgtcacaat |
18995059 |
T |
|
| Q |
273 |
cgaaggtctagcatccgggtcattttgaacacataatcgaccaatctaaatgcacttaatgacttcatttgtagaataatct |
354 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| ||||||||| |||||| |||||||||||||||| |||||||||| |
|
|
| T |
18995060 |
tgaaggtctagcattcgggtcattttgaacacataacagaccaatctgaatgcatttaatgacttcatttgcagaataatct |
18995141 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 71 - 349
Target Start/End: Original strand, 18978935 - 18979194
Alignment:
| Q |
71 |
atttaataaactatcgaggaataaaagtacttgccgacatttgattgtttgaaaataatgcagaactatgggcagattgagtagaactagattcttgtgc |
170 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| |
|
|
| T |
18978935 |
atttaataaactatcgaggaataaaagtacttgccgacatttgattgtttgagaataatgcagaactattggcagattgagtagaact------------ |
18979022 |
T |
|
| Q |
171 |
aagaacgtttgaatccgttctgccatgcaagaaaaa-cgcaggttctggtggagttggtaattcaactgcataaatgctaagataagaagcaactgtcac |
269 |
Q |
| |
|
||||||| ||||| |||||||| ||||| |||||||||| | |||||||||||||||||||||||| ||||||||||||||| ||||||||| |
|
|
| T |
18979023 |
-------tttgaatatgttctaccatgcaataaaaaacgcaggttcttgcggagttggtaattcaactgcataactgctaagataagaaggaactgtcac |
18979115 |
T |
|
| Q |
270 |
gatcgaaggtctagcatccgggtcattttgaacacataatcgaccaatctaaatgcacttaatgacttcatttgtagaat |
349 |
Q |
| |
|
|||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18979116 |
aatcgaaggtcta-catccgggtcatttcgaacacataatcgaccaatctaaatgcacttaatgacttcatttgtagaat |
18979194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 196 - 354
Target Start/End: Original strand, 22085459 - 22085617
Alignment:
| Q |
196 |
tgcaagaaaaacgcaggttctggtggagttggtaattcaactgcataaatgctaagataagaagcaactgtcacgatcgaaggtctagcatccgggtcat |
295 |
Q |
| |
|
|||| |||||| ||||||| | ||||||||||||| |||| || || | |||||||||||||||||| ||||| ||| ||||||||||| || ||||||| |
|
|
| T |
22085459 |
tgcaggaaaaatgcaggttgttgtggagttggtaactcaattgaatgactgctaagataagaagcaattgtcaagattgaaggtctagcctctgggtcat |
22085558 |
T |
|
| Q |
296 |
tttgaacacataatcgaccaatctaaatgcacttaatgacttcatttgtagaataatct |
354 |
Q |
| |
|
|||||||||||||| ||||||||| ||||||||||||||||||| || ||||||||||| |
|
|
| T |
22085559 |
tttgaacacataatagaccaatctgaatgcacttaatgacttcagttttagaataatct |
22085617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 196 - 354
Target Start/End: Original strand, 22001400 - 22001558
Alignment:
| Q |
196 |
tgcaagaaaaacgcaggttctggtggagttggtaattcaactgcataaatgctaagataagaagcaactgtcacgatcgaaggtctagcatccgggtcat |
295 |
Q |
| |
|
|||| |||||| ||||||| | |||||||| |||| |||| || || | |||||||||||||||||| ||||| ||| ||||||||||| || ||||||| |
|
|
| T |
22001400 |
tgcaggaaaaatgcaggttgttgtggagttcgtaactcaattgaatgactgctaagataagaagcaattgtcaagattgaaggtctagcctctgggtcat |
22001499 |
T |
|
| Q |
296 |
tttgaacacataatcgaccaatctaaatgcacttaatgacttcatttgtagaataatct |
354 |
Q |
| |
|
|||||||||||||| ||||||||| ||||||||||||||||||| || ||||||||||| |
|
|
| T |
22001500 |
tttgaacacataatagaccaatctgaatgcacttaatgacttcagttttagaataatct |
22001558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 187 - 354
Target Start/End: Original strand, 21967121 - 21967288
Alignment:
| Q |
187 |
gttctgccatgcaagaaaaacgcaggttctggtggagttggtaattcaactgcataaatgctaagataagaagcaactgtcacgatcgaaggtctagcat |
286 |
Q |
| |
|
||||| || |||| |||||| ||||||| | ||||||||||||| |||| || || | |||||||||||||||||| ||||| ||| ||||||||||| | |
|
|
| T |
21967121 |
gttctaccttgcaggaaaaatgcaggttgttgtggagttggtaactcaattgaatgactgctaagataagaagcaattgtcaagattgaaggtctagcct |
21967220 |
T |
|
| Q |
287 |
ccgggtcattttgaacacataatcgaccaatctaaatgcacttaatgacttcatttgtagaataatct |
354 |
Q |
| |
|
| || |||||||||||||||||| ||||||||| ||||||||||||||||||| || ||||| ||||| |
|
|
| T |
21967221 |
ctggatcattttgaacacataatagaccaatctgaatgcacttaatgacttcagttttagaaaaatct |
21967288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 196 - 354
Target Start/End: Original strand, 21967576 - 21967734
Alignment:
| Q |
196 |
tgcaagaaaaacgcaggttctggtggagttggtaattcaactgcataaatgctaagataagaagcaactgtcacgatcgaaggtctagcatccgggtcat |
295 |
Q |
| |
|
|||| |||||| ||||||| | ||||||||||||| |||| || || | |||||||||||||||||| ||||| ||| ||||||||||| || || |||| |
|
|
| T |
21967576 |
tgcaggaaaaatgcaggttgttgtggagttggtaactcaattgaatgactgctaagataagaagcaattgtcaagattgaaggtctagcctctggatcat |
21967675 |
T |
|
| Q |
296 |
tttgaacacataatcgaccaatctaaatgcacttaatgacttcatttgtagaataatct |
354 |
Q |
| |
|
|||||||||||||| ||||||||| ||||||||||||||||||| || ||||| ||||| |
|
|
| T |
21967676 |
tttgaacacataatagaccaatctgaatgcacttaatgacttcagttttagaaaaatct |
21967734 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 18990218 - 18990165
Alignment:
| Q |
5 |
gttgatggtgtaatttgtgtcaaagttgatgtaatttacctttcatgatgtata |
58 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18990218 |
gttgatggtgtaatttgtgtcaaagttgatgtaatttacctttcatgatgtata |
18990165 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 22210105 - 22210154
Alignment:
| Q |
9 |
atggtgtaatttgtgtcaaagttgatgtaatttacctttcatgatgtata |
58 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
22210105 |
atggtgtaatttgtgtcaaagttgatgtaatttacctttgatgatgtata |
22210154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0264 (Bit Score: 196; Significance: 1e-106; HSPs: 1)
Name: scaffold0264
Description:
Target: scaffold0264; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 71 - 354
Target Start/End: Original strand, 14693 - 14976
Alignment:
| Q |
71 |
atttaataaactatcgaggaataaaagtacttgccgacatttgattgtttgaaaataatgcagaactatgggcagattgagtagaactagattcttgtgc |
170 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||| ||| || | ||||||||||| |||||||||||||||||| ||||||||||| |
|
|
| T |
14693 |
atttaataaactatcgaggaataaaagtacttgcagacatttgattgaatgagaaaagtgcagaactattggcagattgagtagaacttgattcttgtgc |
14792 |
T |
|
| Q |
171 |
aagaacgtttgaatccgttctgccatgcaagaaaaacgcaggttctggtggagttggtaattcaactgcataaatgctaagataagaagcaactgtcacg |
270 |
Q |
| |
|
|||||||| |||| ||||| |||||||||||||||||||||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||||||| |
|
|
| T |
14793 |
aagaacgtcggaataagttctaccatgcaagaaaaacgcaggttcttgtggagttggtaaatcaattgcataactgctaagataagaagcaactgtcaca |
14892 |
T |
|
| Q |
271 |
atcgaaggtctagcatccgggtcattttgaacacataatcgaccaatctaaatgcacttaatgacttcatttgtagaataatct |
354 |
Q |
| |
|
|| ||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
14893 |
attgaaggtctagcattcgggtcattttgaacacataatagaccaatctgaatgcacttaatgacttcatttgtagaataatct |
14976 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0074 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: scaffold0074
Description:
Target: scaffold0074; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 73 - 354
Target Start/End: Complemental strand, 50599 - 50318
Alignment:
| Q |
73 |
ttaataaactatcgaggaataaaagtacttgccgacatttgattgtttgaaaataatgcagaactatgggcagattgagtagaactagattcttgtgcaa |
172 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||| |||| |||| ||||||||||| |||||||||||||||||| ||||||||||||| |
|
|
| T |
50599 |
ttaataaactatcgaggaataaaagtacttgcagacatttgattgattgagaatagtgcagaactattggcagattgagtagaacttgattcttgtgcaa |
50500 |
T |
|
| Q |
173 |
gaacgtttgaatccgttctgccatgcaagaaaaacgcaggttctggtggagttggtaattcaactgcataaatgctaagataagaagcaactgtcacgat |
272 |
Q |
| |
|
|||||| |||| ||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||| || |
|
|
| T |
50499 |
gaacgtcggaataagttctaccatgcaagaaaaacgcaggttcttttggagttggtaattcaattgcataactgctaagataagaagcaactgtcacaat |
50400 |
T |
|
| Q |
273 |
cgaaggtctagcatccgggtcattttgaacacataatcgaccaatctaaatgcacttaatgacttcatttgtagaataatct |
354 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||| |
|
|
| T |
50399 |
tgaaggtctagcattcgggtcattttgaacacataacagaccaatctgaatgcatttaatgacttcatttgtagaataatct |
50318 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0007 (Bit Score: 186; Significance: 1e-100; HSPs: 2)
Name: scaffold0007
Description:
Target: scaffold0007; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 73 - 354
Target Start/End: Complemental strand, 8133 - 7852
Alignment:
| Q |
73 |
ttaataaactatcgaggaataaaagtacttgccgacatttgattgtttgaaaataatgcagaactatgggcagattgagtagaactagattcttgtgcaa |
172 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||| ||| || | ||||||||||| |||||||||||||||||| ||||||||||||| |
|
|
| T |
8133 |
ttaataaactatcgaggaataaaagtacttgcagacatttgattgtatgagaaaagtgcagaactattggcagattgagtagaacttgattcttgtgcaa |
8034 |
T |
|
| Q |
173 |
gaacgtttgaatccgttctgccatgcaagaaaaacgcaggttctggtggagttggtaattcaactgcataaatgctaagataagaagcaactgtcacgat |
272 |
Q |
| |
|
|||||| |||| ||||| |||||||||| ||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||| || |
|
|
| T |
8033 |
gaacgtcggaataagttctaccatgcaagagaaacgcaggttcttttggagttggtaattcaattgcataactgctaagataagaagcaactgtcacaat |
7934 |
T |
|
| Q |
273 |
cgaaggtctagcatccgggtcattttgaacacataatcgaccaatctaaatgcacttaatgacttcatttgtagaataatct |
354 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||| |
|
|
| T |
7933 |
tgaaggtctagcattcgggtcattttgaacacataacagaccaatctgaatgcatttaatgacttcatttgtagaataatct |
7852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0007; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 8263 - 8312
Alignment:
| Q |
9 |
atggtgtaatttgtgtcaaagttgatgtaatttacctttcatgatgtata |
58 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8263 |
atggtgtaatttttgtcaaagttgatgtaatttacctttcatgatgtata |
8312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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